Citrus Sinensis ID: 010432

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-
Protein Sequence
MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPKPNGKP
Secondary Structure (PSIPRED)
cccccccccEEEEEEEccccHHHHcccccccHHHHHHHHcccEEEEEEccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccHHHHHHHHcccccccccccccccEEEEEEEccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEEEcccccHHHHcccccccccHHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccHHHHHHHHHHcccccccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEcccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHccccHHHccccccccEEEEEEEcccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHcccccEEEEEEEEccccEEEEEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHcHHHEcHHHHHHHHHHHHHHHHHHHHccccccccccEHcHcccccccccccccEEEEEEccccccccHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHccHHHcccccHHHHHHHHHHHHHHHcccHcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgfdgengkvkkaswdsskskakkkkkkvedeVEVEEEEETGCWVKLRffgscissrskvdssvsgtsthyeskstndtsrdqpaaAVISStttsnaesnsstsKLEEELKVASRLRKFtfndlklatrnfrpesllgeggfgcvfkgwieengtapvkpgtgLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYcieddqrllvyefmprgslenhlfrrslplpwSIRMKIALGAAKGLAFLheeaerpviyrdfktsNILLDAVRAENYGKFGFCIYYGlffnnmlfqdynaklsdfglakdgpegdkthvstrvmgtygyaapeyvmtghltsrsdVYSFGVVLLEMLTgrrsmdknrpngehnlvewarphlgerrrfyrlidprleghfsiKGAQKAAQLAAHClsrdpkarpLMSEVVEAlkplpnlkdmasssYYFQTMQaerigsspntrngiraqggslsrngqrslsipngsyaspyhhqfphpspkpngkp
Flexible Loop (DISEMBL)
mgfdgengkvkkaswdsskskakkkkkkvedeveveeeeetgcwvklrffgscissrskvdssvsgtsthyeskstndtsrdqpAAAVISStttsnaesnsstsklEEELKVASRLRkftfndlklatrnfrpesllgeGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFglakdgpegdkthvstrVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTgrrsmdknrpngehnlvewarphlgerRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAlkplpnlkDMASSSYYFQTMQAerigsspntrNGIRAQggslsrngqRSLSIPNGSYAspyhhqfphpspkpngkp
Low Complexity Region (SEG)
MGFDGENGkvkkaswdsskskakkkkkkvedeveveeeeeTGCWVKLRFFGscissrskvdssvsgtsTHYESKSTNDTSRDQPAAAVIsstttsnaesnsstsKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPKPNGKP
Disordered region (IsUnstruct)
****************************************TGCWVKLRFFGSCI************************************************************RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK*******THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG*************NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL********************************************************************************************
Disordered Region (DISOPRED)
*****************************************GCWVKLRFFGSC***************************************************************RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL************************************************************************
Disordered Region (DISEMBL)
****************************************TGCWVKLRFFGSCIS*******************************************************KVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG*********HCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNGQRSLSIPNGSYASPYHHQF***********
Disordered Region (DISPRO)
***************************************ETGCWVKLRFFGSCIS**********************************************************SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN**********************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFDGENGKVKKASWDSSxxxxxxxxxxxxxxxxxxxxxxxGCWVKLRFFGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPKPNGKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	511	2.2.26 [Sep-21-2011]
Q9LFP7	493	Probable receptor-like pr	yes	no	0.919	0.953	0.714	0.0
Q9SRH7	490	Receptor-like serine/thre	no	no	0.863	0.9	0.719	0.0
Q06548	410	Protein kinase APK1A, chl	no	no	0.690	0.860	0.568	1e-123
P46573	412	Protein kinase APK1B, chl	no	no	0.696	0.864	0.560	1e-120
P43293	389	Probable serine/threonine	no	no	0.741	0.974	0.533	1e-120
Q8GXZ3	410	Serine/threonine-protein	no	no	0.665	0.829	0.595	1e-119
O48814	395	Serine/threonine-protein	no	no	0.686	0.888	0.534	1e-116
O49840	426	Protein kinase 2B, chloro	no	no	0.814	0.976	0.498	1e-114
Q8H186	389	Probable receptor-like pr	no	no	0.616	0.809	0.559	1e-111
O49839	426	Protein kinase 2A, chloro	no	no	0.712	0.854	0.529	1e-110

>sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/525 (71%), Positives = 405/525 (77%), Gaps = 55/525 (10%)

Query: 1   MGFDGENGKVKKASWDSSKSKA---KKKKKKVEDE-----VEVEEEEETGCWVKLRFFGS 52
           MG D    K    +W S K K    K  KKK  D+      E EE E +GCWVK RF   
Sbjct: 1   MGLDAVKAK---GNWKSEKPKETENKNHKKKNGDDNKSRNEEEEEGEASGCWVKFRFMIG 57

Query: 53  CISSRSKVDSSVSG------TSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKL 106
           CI S+S +D+S S       T T  ESKS N+ S DQP   V S+TTTSNAES+SST  +
Sbjct: 58  CIPSKSDLDASSSSIYGSNCTVTTMESKSANEKSNDQPVGQVSSTTTTSNAESSSSTPVI 117

Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
            EEL ++S LRKFTFNDLKL+TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV
Sbjct: 118 SEELNISSHLRKFTFNDLKLSTRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 177

Query: 167 AVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL 226
           AVKTLN DGLQGHKEWLAE+NFLG+L+H NLVKL+GYCIEDDQRLLVYEFMPRGSLENHL
Sbjct: 178 AVKTLNPDGLQGHKEWLAEINFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL 237

Query: 227 FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
           FRRSLPLPWSIRMKIALGAAKGL+FLHEEA +PVIYRDFKTSNILLDA            
Sbjct: 238 FRRSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDA------------ 285

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        DYNAKLSDFGLAKD P+  KTHVSTRVMGTYGYAAPEYVMTGHLTS+
Sbjct: 286 -------------DYNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLTSK 332

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL ++RRFYRL+DPRLEGHFSIK
Sbjct: 333 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLDPRLEGHFSIK 392

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNT 466
           GAQK  QLAA CLSRDPK RP MS+VVEALKPLP+LKDMASSSYYFQTMQAER+      
Sbjct: 393 GAQKVTQLAAQCLSRDPKIRPKMSDVVEALKPLPHLKDMASSSYYFQTMQAERL------ 446

Query: 467 RNGIRAQGGSLSRNGQ-----RSLSIPNGSYASPYHHQFPHPSPK 506
           +NG     G  SRNGQ     R+LS P+GS  SPY HQ P P PK
Sbjct: 447 KNGSGRSQGFGSRNGQHQPVFRTLSSPHGS--SPYRHQIPSPKPK 489

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/474 (71%), Positives = 380/474 (80%), Gaps = 33/474 (6%)

Query: 37  EEEETGCWVKLRFFGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSN 96
           EEE  GCWVK R+   C SS S V++S++ +++   S+S    S DQP   V S+TTTSN
Sbjct: 42  EEEANGCWVKFRYIVCCASSTSDVETSLTLSTSTVGSQSAIVQSNDQPVGPVSSTTTTSN 101

Query: 97  AESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTA 156
           AES+ ST  + EEL + S L+KF+F DLKLATRNFRPESLLGEGGFGCVFKGW+EENGTA
Sbjct: 102 AESSLSTPIISEELNIYSHLKKFSFIDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTA 161

Query: 157 PVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEF 216
           PVKPGTGLTVAVKTLN DGLQGHKEWLAE+N+LG+L+H NLVKL+GYCIEDDQRLLVYEF
Sbjct: 162 PVKPGTGLTVAVKTLNPDGLQGHKEWLAEINYLGNLLHPNLVKLVGYCIEDDQRLLVYEF 221

Query: 217 MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
           MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL+FLHEEA +PVIYRDFKTSNILLD   
Sbjct: 222 MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDG-- 279

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                                  +YNAKLSDFGLAKD P+  KTHVSTRVMGTYGYAAPE
Sbjct: 280 -----------------------EYNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPE 316

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
           YVMTGHLTS+SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL ++RRFYRL+D
Sbjct: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKRRFYRLLD 376

Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQ 456
           PRLEGHFS+KGAQK  QLAA CLSRD K RP MSEVVE LKPLP+LKDMAS+SYYFQTMQ
Sbjct: 377 PRLEGHFSVKGAQKVTQLAAQCLSRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQ 436

Query: 457 AERIGSSPNTRNGIRAQGGSLSRNGQ---RSLSIPNGSY-ASPYHHQFPHPSPK 506
           AER+ +   + +G        SRNGQ   R+LS P+G   +SPY HQ P P PK
Sbjct: 437 AERLKAGSGSGSGRGFG----SRNGQPVFRTLSSPHGQAGSSPYRHQIPSPKPK 486

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1

 Score =  443 bits (1139), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/396 (56%), Positives = 279/396 (70%), Gaps = 43/396 (10%)

Query: 50  FGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEE 109
            G C+S++ K +SS  G ST Y++K          + +V  S  T            E E
Sbjct: 1   MGICLSAQVKAESS--GASTKYDAKDIGSLGSKASSVSVRPSPRT------------EGE 46

Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           +  +  L+ F+F +LK ATRNFRP+S+LGEGGFGCVFKGWI+E      +PGTGL +AVK
Sbjct: 47  ILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVK 106

Query: 170 TLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR 229
            LN DG QGH+EWLAEVN+LG   H +LVKLIGYC+ED+ RLLVYEFMPRGSLENHLFRR
Sbjct: 107 KLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRR 166

Query: 230 SL---PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
            L   PL W +R+K+ALGAAKGLAFLH    R VIYRDFKTSNILLD+            
Sbjct: 167 GLYFQPLSWKLRLKVALGAAKGLAFLHSSETR-VIYRDFKTSNILLDS------------ 213

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        +YNAKLSDFGLAKDGP GDK+HVSTRVMGT+GYAAPEY+ TGHLT++
Sbjct: 214 -------------EYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTK 260

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDVYSFGVVLLE+L+GRR++DKNRP+GE NLVEWA+P+L  +R+ +R+ID RL+  +S++
Sbjct: 261 SDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSME 320

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNL 442
            A K A L+  CL+ + K RP MSEVV  L+ + +L
Sbjct: 321 EACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSL 356

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2

 Score =  433 bits (1114), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/398 (56%), Positives = 275/398 (69%), Gaps = 42/398 (10%)

Query: 50  FGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEE 109
            G C+S++ K  S   G S  Y S   ND+   + ++  I +             + E E
Sbjct: 1   MGICLSAQIKAVSP--GASPKYMSSEANDSLGSKSSSVSIRTN-----------PRTEGE 47

Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           +  +  L+ FTF +LK ATRNFRP+S+LGEGGFG VFKGWI+E      KPGTG+ +AVK
Sbjct: 48  ILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVK 107

Query: 170 TLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR 229
            LN DG QGH+EWLAEVN+LG   H NLVKLIGYC+ED+ RLLVYEFMPRGSLENHLFRR
Sbjct: 108 KLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRR 167

Query: 230 S---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
                PL W++R+K+ALGAAKGLAFLH  AE  VIYRDFKTSNILLD+            
Sbjct: 168 GSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDS------------ 214

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        +YNAKLSDFGLAKDGP GDK+HVSTR+MGTYGYAAPEY+ TGHLT++
Sbjct: 215 -------------EYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTK 261

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDVYS+GVVLLE+L+GRR++DKNRP GE  LVEWARP L  +R+ +R+ID RL+  +S++
Sbjct: 262 SDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSME 321

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD 444
            A K A LA  CL+ + K RP M+EVV  L+ +  L +
Sbjct: 322 EACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQTLNE 359

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2

 Score =  432 bits (1111), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/422 (53%), Positives = 286/422 (67%), Gaps = 43/422 (10%)

Query: 50  FGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEE 109
            G C S+R K D +   +ST   SK     SRD         +  S+  S S   + E E
Sbjct: 1   MGGCFSNRIKTDIA---SSTWLSSKFL---SRD--------GSKGSSTASFSYMPRTEGE 46

Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           +   + L+ F+ ++LK ATRNFRP+S++GEGGFGCVFKGWI+E+  AP KPGTG+ +AVK
Sbjct: 47  ILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVK 106

Query: 170 TLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR 229
            LN +G QGH+EWLAE+N+LG L H NLVKLIGYC+E++ RLLVYEFM RGSLENHLFRR
Sbjct: 107 RLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRR 166

Query: 230 SL---PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
                PL W+ R+++ALGAA+GLAFLH  A+  VIYRDFK SNILLD+            
Sbjct: 167 GTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDS------------ 213

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        +YNAKLSDFGLA+DGP GD +HVSTRVMGT GYAAPEY+ TGHL+ +
Sbjct: 214 -------------NYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVK 260

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDVYSFGVVLLE+L+GRR++DKN+P GEHNLV+WARP+L  +RR  R++DPRL+G +S+ 
Sbjct: 261 SDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLT 320

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNT 466
            A K A LA  C+S D K+RP M+E+V+ ++ L   K+ +      Q      I  SP  
Sbjct: 321 RALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEASKEQQNPQISIDNIINKSPQA 380

Query: 467 RN 468
            N
Sbjct: 381 VN 382

May play a role in the regulation of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1

 Score =  429 bits (1104), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/373 (59%), Positives = 268/373 (71%), Gaps = 33/373 (8%)

Query: 99  SNSSTSKLEEELKVA---SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGT 155
           S+ ST +  ++ +     +++  FT  +L+  T++FRP+ +LGEGGFG V+KG+I++N  
Sbjct: 34  SDPSTPRFRDDSRTPISYAQVIPFTLFELETITKSFRPDYILGEGGFGTVYKGYIDDNLR 93

Query: 156 APVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYE 215
             +K    L VAVK LN +GLQGH+EWL EVNFLG L H NLVKLIGYC EDD RLLVYE
Sbjct: 94  VGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYE 150

Query: 216 FMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
           FM RGSLENHLFR++  PL WS RM IALGAAKGLAFLH  AERPVIYRDFKTSNILLD+
Sbjct: 151 FMLRGSLENHLFRKTTAPLSWSRRMMIALGAAKGLAFLHN-AERPVIYRDFKTSNILLDS 209

Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 334
                                    DY AKLSDFGLAK GP+GD+THVSTRVMGTYGYAA
Sbjct: 210 -------------------------DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 244

Query: 335 PEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRL 394
           PEYVMTGHLT+RSDVYSFGVVLLEMLTGR+S+DK RP+ E NLV+WARP L ++R+  ++
Sbjct: 245 PEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDWARPKLNDKRKLLQI 304

Query: 395 IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQT 454
           IDPRLE  +S++ AQKA  LA +CLS++PKARPLMS+VVE L+PL    D          
Sbjct: 305 IDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTGDALIPCATTTA 364

Query: 455 MQAERIGSSPNTR 467
             A  +G  P+ R
Sbjct: 365 GAAFAMGGVPDYR 377

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1

 Score =  418 bits (1074), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/395 (53%), Positives = 267/395 (67%), Gaps = 44/395 (11%)

Query: 50  FGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEE 109
            GSC SSR K D   +G S+     S +        AA                 K E E
Sbjct: 1   MGSCFSSRVKADIFHNGKSSDLYGLSLSSRKSSSTVAA---------------AQKTEGE 45

Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           +  ++ ++ FTFN+LKLATRNFRP+S++GEGGFGCVFKGW++E+   P KPGTGL +AVK
Sbjct: 46  ILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVK 105

Query: 170 TLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR 229
            LN +G QGH+EWL E+N+LG L H NLVKLIGYC+ED+ RLLVYEFM +GSLENHLFRR
Sbjct: 106 KLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRR 165

Query: 230 SL---PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
                PLPW +R+ +AL AAKGLAFLH +  + VIYRD K SNILLDA            
Sbjct: 166 GAYFKPLPWFLRVNVALDAAKGLAFLHSDPVK-VIYRDIKASNILLDA------------ 212

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        DYNAKLSDFGLA+DGP GD ++VSTRVMGTYGYAAPEY+ +GHL +R
Sbjct: 213 -------------DYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNAR 259

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDVYSFGV+LLE+L+G+R++D NRP  E NLV+WARP+L  +R+   ++D RL+  +  +
Sbjct: 260 SDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPE 319

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN 441
            A + A +A  CLS +PK+RP M +VV AL+ L +
Sbjct: 320 EAVRMASVAVQCLSFEPKSRPTMDQVVRALQQLQD 354

Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1

 Score =  414 bits (1063), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/461 (49%), Positives = 293/461 (63%), Gaps = 45/461 (9%)

Query: 50  FGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNS-STSKLEE 108
            G+C+ S +KVDSS      +  S S+  +S+   +    S +  S +   S  T + E 
Sbjct: 1   MGNCLDSSAKVDSSSHSPHANSASLSSRVSSKTSRSTVPSSLSINSYSSVESLPTPRTEG 60

Query: 109 ELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
           E+  +  L+ FTFN+LK ATRNFRP+SLLGEGGFG VFKGWI+       KPG+G+ VAV
Sbjct: 61  EILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAV 120

Query: 169 KTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
           K L  +G QGHKEWL EVN+LG L H NLVKL+GYC+E + RLLVYEFMP+GSLENHLFR
Sbjct: 121 KKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFR 180

Query: 229 R-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI 287
           R + PL W+IRMK+A+GAAKGL FLH+ A+  VIYRDFK +NILLDA             
Sbjct: 181 RGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDA------------- 226

Query: 288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS 347
                       ++N+KLSDFGLAK GP GDKTHVST+VMGT+GYAAPEYV TG LT++S
Sbjct: 227 ------------EFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKS 274

Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
           DVYSFGVVLLE+L+GRR++DK++   E +LV+WA P+LG++R+ +R++D RL G +  KG
Sbjct: 275 DVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKG 334

Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTR 467
           A  AA LA  CL+ D K RP MSEV+  L  L + K                +G+     
Sbjct: 335 AYTAASLALQCLNPDAKLRPKMSEVLAKLDQLESTK------------PGTGVGNRQAQI 382

Query: 468 NGIRAQGGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPKPN 508
           +  R   GS+ +   R       SY  P  H  P  SP P 
Sbjct: 383 DSPRGSNGSIVQKSPRRY-----SYDRPLLHITPGASPLPT 418

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1

 Score =  401 bits (1030), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/345 (55%), Positives = 248/345 (71%), Gaps = 30/345 (8%)

Query: 101 SSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP 160
           ++  K E E+  ++ ++ F+FN+LKLATRNFR +S++GEGGFGCVF+GW++E    P K 
Sbjct: 31  ATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKS 90

Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
            +GL +AVK LN DG QGH+EWL E+N+LG L H NLVKLIGYC+ED+QRLLVYEFM +G
Sbjct: 91  SSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKG 150

Query: 221 SLENHLF----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
           SLENHLF    +   PL W +R+K+AL AAKGLAFLH +  + VIYRD K SNILLD+  
Sbjct: 151 SLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVK-VIYRDIKASNILLDS-- 207

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                                  D+NAKLSDFGLA+DGP G++++VSTRVMGT+GYAAPE
Sbjct: 208 -----------------------DFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPE 244

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
           YV TGHL +RSDVYSFGVVLLE+L GR+++D NRP  E NLV+WARP+L  RR+   ++D
Sbjct: 245 YVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVD 304

Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN 441
            RL   +  +GA + A +A  CLS +PK+RP M +VV AL  L +
Sbjct: 305 TRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQD 349

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1

 Score =  400 bits (1028), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/395 (52%), Positives = 272/395 (68%), Gaps = 31/395 (7%)

Query: 50  FGSCISSRSKVDSSVSGTSTHYESKSTNDTSRDQ----PAAAVISSTTTSNAESNSSTSK 105
            G+C+ S +KVD+S      +  S  +  +S+      P+    +S +T ++     T +
Sbjct: 1   MGNCLDSSAKVDNSNHSPHANSASSGSKVSSKTSRSTGPSGLSTTSYSTDSSFGPLPTLR 60

Query: 106 LEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT 165
            E E+  +  L+ FTFN+LK AT+NFR ++LLGEGGFGCVFKGWI++      +PG+G+ 
Sbjct: 61  TEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIV 120

Query: 166 VAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 225
           VAVK L  +G QGHKEWL EVN+LG L H NLV L+GYC E + RLLVYEFMP+GSLENH
Sbjct: 121 VAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENH 180

Query: 226 LFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
           LFRR + PL W+IRMK+A+GAAKGL FLHE A+  VIYRDFK +NILLDA          
Sbjct: 181 LFRRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDA---------- 229

Query: 285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT 344
                          D+NAKLSDFGLAK GP GD THVST+V+GT+GYAAPEYV TG LT
Sbjct: 230 ---------------DFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLT 274

Query: 345 SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS 404
           ++SDVYSFGVVLLE+++GRR+MD +    E++LV+WA P+LG++R+ +R++D +L G + 
Sbjct: 275 AKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYP 334

Query: 405 IKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
            KGA  AA LA  CL+ D K RP MSEV+  L+ L
Sbjct: 335 QKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQL 369

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	511
359473277	481	PREDICTED: probable receptor-like protei	0.931	0.989	0.844	0.0
255558222	495	Protein kinase APK1B, chloroplast precur	0.947	0.977	0.832	0.0
351722951	485	serine/threonine protein kinase-like pro	0.935	0.985	0.841	0.0
356498172	491	PREDICTED: probable receptor-like protei	0.945	0.983	0.843	0.0
147857978	495	hypothetical protein VITISV_008843 [Viti	0.931	0.961	0.815	0.0
356567562	487	PREDICTED: probable receptor-like protei	0.943	0.989	0.856	0.0
356526888	487	PREDICTED: probable receptor-like protei	0.943	0.989	0.856	0.0
224100247	478	predicted protein [Populus trichocarpa]	0.929	0.993	0.819	0.0
224100451	445	predicted protein [Populus trichocarpa]	0.864	0.993	0.880	0.0
53689728	603	serine/threonine protein kinase-like [So	0.921	0.781	0.808	0.0

>gi|359473277|ref|XP_003631281.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Vitis vinifera] gi|296086431|emb|CBI32020.3| unnamed protein product [Vitis vinifera]

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/516 (84%), Positives = 454/516 (87%), Gaps = 40/516 (7%)

Query: 1   MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGC-WVKLRFFGSCISSRSK 59
           MG  G + KV+  SW+  KSK +KKK           EEETGC WVKLRF  SCISSRSK
Sbjct: 1   MGLGGNDVKVE--SWEVGKSKGRKKKDG--------GEEETGCCWVKLRFMASCISSRSK 50

Query: 60  VDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKF 119
           VDSS+SGTSTHYE++STNDTSRDQP A V+SSTTTSNAESNSSTSKLEEELKVASRLRKF
Sbjct: 51  VDSSISGTSTHYENRSTNDTSRDQPVAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKF 110

Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           +FNDLK+ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH
Sbjct: 111 SFNDLKMATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 170

Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
           KEWLAEVNFLGDL+H NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR+LPLPW+IRM
Sbjct: 171 KEWLAEVNFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRALPLPWAIRM 230

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                         
Sbjct: 231 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA------------------------- 265

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           +YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM
Sbjct: 266 EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 325

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
           LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL
Sbjct: 326 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 385

Query: 420 SRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSR 479
           SRDPK RPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPN RNG+R Q G LSR
Sbjct: 386 SRDPKVRPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNARNGVRTQQGILSR 445

Query: 480 NG---QRSLSIPNGSYASPYHH-QFPHPSPKPNGKP 511
           NG   QRSLSIPNGS+ASPYH  Q+P+ SPKPNGKP
Sbjct: 446 NGHQQQRSLSIPNGSHASPYHQNQYPYQSPKPNGKP 481

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558222|ref|XP_002520138.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis] gi|223540630|gb|EEF42193.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/520 (83%), Positives = 451/520 (86%), Gaps = 36/520 (6%)

Query: 1   MGFDGENG-KVKKASWDSSKSKAKKKKKK-VEDEV------EVEEEEETGCWVKLRFFGS 52
           MG   E+G + K +SW+  K K + KKK+ V +        +V EE ETGCW K RF GS
Sbjct: 1   MGLGSEDGNRAKASSWEVCKPKGRNKKKQDVSNSSGGASPGDVVEEAETGCWFKFRFIGS 60

Query: 53  CISSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKV 112
           CISSRSKVDSSVSGTSTH ESKSTNDTSRDQP A  ISSTTTSNAESNSSTSKLEEELK+
Sbjct: 61  CISSRSKVDSSVSGTSTHCESKSTNDTSRDQPTAPTISSTTTSNAESNSSTSKLEEELKI 120

Query: 113 ASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
           ASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN
Sbjct: 121 ASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 180

Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 232
           HDGLQGHKEWLAEVN+LGDLVH NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP
Sbjct: 181 HDGLQGHKEWLAEVNYLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 240

Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                  
Sbjct: 241 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA------------------ 282

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
                  DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF
Sbjct: 283 -------DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 335

Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           GVVLLEM+TGRRSMDKNRP GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA
Sbjct: 336 GVVLLEMITGRRSMDKNRPIGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 395

Query: 413 QLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRA 472
           QLAAHCLSRDPKARPLMSEVVE LKPLPNLKDMASSSYYFQ+MQA++I SSPN ++  R 
Sbjct: 396 QLAAHCLSRDPKARPLMSEVVEVLKPLPNLKDMASSSYYFQSMQADKIASSPNAKSSNRT 455

Query: 473 QGGSLSRNG--QRSLSIPNGSYASPYHHQFPHPSPKPNGK 510
           QGG L RNG  QRSLSIPNGS+ASPYHHQ+P  SPKPNGK
Sbjct: 456 QGG-LLRNGQQQRSLSIPNGSHASPYHHQYPFQSPKPNGK 494

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722951|ref|NP_001235470.1| serine/threonine protein kinase-like protein [Glycine max] gi|223452506|gb|ACM89580.1| serine/threonine protein kinase-like protein [Glycine max]

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/516 (84%), Positives = 453/516 (87%), Gaps = 38/516 (7%)

Query: 1   MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSKV 60
           MG   ENGKV + SWD  KSK +KKKK  E       E E GCWV+LRF GSCISSRSKV
Sbjct: 1   MGLGAENGKVVE-SWDVCKSKGRKKKKGDE-----GGEAEAGCWVRLRFIGSCISSRSKV 54

Query: 61  DSSVSG--TSTHY-ESKSTNDTSRDQPAAAVISSTTTSNAESNSS-TSKLEEELKVASRL 116
           D+SVSG  TSTHY ESKSTNDTSRDQP A  +SSTTTSNAESNSS TSKLEEELK+ASRL
Sbjct: 55  DTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSSTSKLEEELKIASRL 114

Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           RKF+FN+LKLATRNFRPES LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL
Sbjct: 115 RKFSFNELKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 174

Query: 177 QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
           QGHKEWLAEVNFLGDLVH NLVKL+GYCIE+DQRLLVYEFMPRGSLENHLFRRS+PLPWS
Sbjct: 175 QGHKEWLAEVNFLGDLVHPNLVKLVGYCIEEDQRLLVYEFMPRGSLENHLFRRSIPLPWS 234

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                      
Sbjct: 235 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA---------------------- 272

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
              +YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS+SDVYSFGVVL
Sbjct: 273 ---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVL 329

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
           LEMLTGRRSMDK+RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS+KGAQKAA LAA
Sbjct: 330 LEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSVKGAQKAALLAA 389

Query: 417 HCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGS 476
           HCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQ MQA+RIG+SPNTRNG R QG  
Sbjct: 390 HCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRIGASPNTRNG-RMQGAL 448

Query: 477 LSRNG--QRSLSIPNGSYASPYHHQFPHPSPKPNGK 510
           L+RNG  QRSLSIPNG+YASPYHHQFP PSPKPNGK
Sbjct: 449 LTRNGQQQRSLSIPNGTYASPYHHQFPQPSPKPNGK 484

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498172|ref|XP_003517927.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/517 (84%), Positives = 454/517 (87%), Gaps = 34/517 (6%)

Query: 1   MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETG--CWVKLRFFGSCISSRS 58
           MG  GENGKV + SWD  KSK  +KKKK  D  EVEE  E    CWV+LRF GSCISSRS
Sbjct: 1   MGLGGENGKVVE-SWDVCKSKGGRKKKKKGDAEEVEEGAEAEAGCWVRLRFIGSCISSRS 59

Query: 59  KVDSSVS--GTSTHY-ESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASR 115
           KVD+SVS  G STHY ESKSTNDTSRDQP A  +SSTTTSNAESNSSTSKLEEELK+ASR
Sbjct: 60  KVDTSVSASGISTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASR 119

Query: 116 LRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG 175
           LRKF+FNDLK ATRNFRPES LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG
Sbjct: 120 LRKFSFNDLKSATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG 179

Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
           LQGHKEWLAEVNFLGDLVH NLVKL+GYCIEDDQRLLVYEFMPRGSLENHLFRRS+PLPW
Sbjct: 180 LQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPW 239

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
           SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                     
Sbjct: 240 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA--------------------- 278

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
               DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS+SDVYSFGVV
Sbjct: 279 ----DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVV 334

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLA 415
           LLEMLTGRRSMDK+RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS+KGAQKAAQLA
Sbjct: 335 LLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSVKGAQKAAQLA 394

Query: 416 AHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGG 475
           AHCLSRDPK+RPLMSEVVEALKPLP+LKDMASSSYYFQ MQA+R G+SPNTRNG R QG 
Sbjct: 395 AHCLSRDPKSRPLMSEVVEALKPLPSLKDMASSSYYFQAMQADRFGASPNTRNG-RMQGA 453

Query: 476 SLSRNG--QRSLSIPNGSYASPYHHQFPHPSPKPNGK 510
            L+RNG  QRSLSIPNG+YASPYHHQFP PSPKPNGK
Sbjct: 454 LLTRNGQQQRSLSIPNGTYASPYHHQFPQPSPKPNGK 490

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147857978|emb|CAN82516.1| hypothetical protein VITISV_008843 [Vitis vinifera]

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/530 (81%), Positives = 449/530 (84%), Gaps = 54/530 (10%)

Query: 1   MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGC-WVKLRFFGSCISSRSK 59
           MG  G + KV+  SW+  KSK +KKK           EEETGC WVKLRF  SCISSRSK
Sbjct: 1   MGLGGNDVKVE--SWEVGKSKGRKKKDG--------GEEETGCCWVKLRFMASCISSRSK 50

Query: 60  VDSSVSGTSTHY--------ESKSTN------DTSRDQPAAAVISSTTTSNAESNSSTSK 105
           VDSS+SGTSTHY        E +S N         RDQP A V+SSTTTSNAESNSSTSK
Sbjct: 51  VDSSISGTSTHYDLGVXFDVEPRSLNVFWCDFGLCRDQPVAPVVSSTTTSNAESNSSTSK 110

Query: 106 LEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT 165
           LEEELKVASRLRKF+FNDLK+ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT
Sbjct: 111 LEEELKVASRLRKFSFNDLKMATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT 170

Query: 166 VAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 225
           VAVKTLNHDGLQGHKEWLAEVNFLGDL+H NLVKLIGYCIEDDQRLLVYEFMPRGSLENH
Sbjct: 171 VAVKTLNHDGLQGHKEWLAEVNFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 230

Query: 226 LFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
           LFRR+LPLPW+IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA           
Sbjct: 231 LFRRALPLPWAIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA----------- 279

Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                         +YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS
Sbjct: 280 --------------EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 325

Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
           RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI
Sbjct: 326 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 385

Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPN 465
           KGAQKAAQLAAHCLSRDPK RPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPN
Sbjct: 386 KGAQKAAQLAAHCLSRDPKVRPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPN 445

Query: 466 TRNGIRAQGGSLSRNG---QRSLSIPNGSYASPYHH-QFPHPSPKPNGKP 511
            RNG+R Q G LSRNG   QRSLSIPNGS+ASPYH  Q+P+ SPKPNGKP
Sbjct: 446 ARNGVRTQQGILSRNGHQQQRSLSIPNGSHASPYHQNQYPYQSPKPNGKP 495

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567562|ref|XP_003551987.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/514 (85%), Positives = 456/514 (88%), Gaps = 32/514 (6%)

Query: 1   MGFDG-ENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSK 59
           MG  G ENGKV   S D  KSK +KKKKK +   EVEE+EETGCW +LRF GSCISSRSK
Sbjct: 1   MGLGGAENGKVVVESLDVCKSKGRKKKKKED--GEVEEKEETGCWFRLRFIGSCISSRSK 58

Query: 60  VDSSVSGTSTHY-ESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRK 118
           VDSSVSGTST+Y ESKST DTSRDQP   V+SSTTTSNAESNSSTSKLEEE KV+SRLRK
Sbjct: 59  VDSSVSGTSTNYAESKSTIDTSRDQPTVPVVSSTTTSNAESNSSTSKLEEEFKVSSRLRK 118

Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178
           FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG
Sbjct: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178

Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
           HKEWLAEVN+LGDLVH +LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR
Sbjct: 179 HKEWLAEVNYLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                        
Sbjct: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA------------------------ 274

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            +YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE
Sbjct: 275 -EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 333

Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA LAAHC
Sbjct: 334 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHC 393

Query: 419 LSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLS 478
           LSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQA+R  +SPNTRNG R QG  L+
Sbjct: 394 LSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNG-RTQGALLT 452

Query: 479 RNG--QRSLSIPNGSYASPYHHQFPHPSPKPNGK 510
           RNG  QRSLSIP+G++ASPYHHQFP PSPKPNGK
Sbjct: 453 RNGQQQRSLSIPHGTHASPYHHQFPQPSPKPNGK 486

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526888|ref|XP_003532048.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/514 (85%), Positives = 455/514 (88%), Gaps = 32/514 (6%)

Query: 1   MGFDG-ENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSK 59
           MG  G ENGKV   S D  KSK +KKKKK +   EVEEEEETGCW +LRF GSCISSRSK
Sbjct: 1   MGLGGAENGKVVVESLDVCKSKGRKKKKKED--GEVEEEEETGCWFRLRFIGSCISSRSK 58

Query: 60  VDSSVSGTSTHY-ESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRK 118
           VDSSVSGTST+Y ESKST DTSRDQP   V+SSTTTSNAESNSSTSKLEEELKVASRLRK
Sbjct: 59  VDSSVSGTSTNYAESKSTIDTSRDQPTLRVVSSTTTSNAESNSSTSKLEEELKVASRLRK 118

Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178
           F FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG
Sbjct: 119 FAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178

Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
           HKEWLAEVN+LGDLVH +LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR
Sbjct: 179 HKEWLAEVNYLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                        
Sbjct: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA------------------------ 274

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            +YN+KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE
Sbjct: 275 -EYNSKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 333

Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFY+LIDPRLEGHFSIKGAQKAA LAAHC
Sbjct: 334 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSIKGAQKAAHLAAHC 393

Query: 419 LSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLS 478
           LSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQA+R   SPNTRNG R QG  L+
Sbjct: 394 LSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSVSPNTRNG-RTQGALLT 452

Query: 479 RNG--QRSLSIPNGSYASPYHHQFPHPSPKPNGK 510
           RNG  QRSLSIP+G++ASPYHHQFP PSPKPNGK
Sbjct: 453 RNGQQQRSLSIPHGTHASPYHHQFPQPSPKPNGK 486

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100247|ref|XP_002311801.1| predicted protein [Populus trichocarpa] gi|222851621|gb|EEE89168.1| predicted protein [Populus trichocarpa]

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/514 (81%), Positives = 442/514 (85%), Gaps = 39/514 (7%)

Query: 1   MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSKV 60
           MG   E GKVK +SWD  KSK +KKK          +  + GCWVKLR  G CISSRSKV
Sbjct: 1   MGLGSEEGKVK-SSWDVCKSKERKKK----------DGTKAGCWVKLRLVGGCISSRSKV 49

Query: 61  DSSVSGTSTH-YESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKF 119
           DSSVSGT     ESKS NDTS DQPA  V+SS+TTSN ESNSS SKLEEELKVASRLRKF
Sbjct: 50  DSSVSGTICESTESKSINDTSTDQPAVPVVSSSTTSNTESNSSLSKLEEELKVASRLRKF 109

Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH
Sbjct: 110 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 169

Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
           KEWLAEVN+LGDLVH NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM
Sbjct: 170 KEWLAEVNYLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 229

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA                         
Sbjct: 230 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA------------------------- 264

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           DYNAKLSDFGLAKD PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM
Sbjct: 265 DYNAKLSDFGLAKDAPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 324

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
           +TGRRSMDKNRPNGEHNLVEWARP+LGERRRFYRLIDPRL+GHFSIKGAQKAAQLAAHCL
Sbjct: 325 ITGRRSMDKNRPNGEHNLVEWARPYLGERRRFYRLIDPRLQGHFSIKGAQKAAQLAAHCL 384

Query: 420 SRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSR 479
           SRDPKARPLMSEVV+ LKPLPNLKDMASSSYYFQTMQ +R+GSSPN +NG+R+Q G LSR
Sbjct: 385 SRDPKARPLMSEVVDTLKPLPNLKDMASSSYYFQTMQGDRVGSSPNAKNGVRSQAGLLSR 444

Query: 480 NG--QRSLSIPNGSYASPYHHQFPHPSPKPNGKP 511
           NG  QRS SIP+G +ASP+HHQ+PH SPKP+GKP
Sbjct: 445 NGHQQRSFSIPHGPHASPFHHQYPHQSPKPSGKP 478

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100451|ref|XP_002311881.1| predicted protein [Populus trichocarpa] gi|222851701|gb|EEE89248.1| predicted protein [Populus trichocarpa]

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/470 (88%), Positives = 426/470 (90%), Gaps = 28/470 (5%)

Query: 42  GCWVKLRFFGSCISSRSKVDSSVSGTSTH-YESKSTNDTSRDQPAAAVISSTTTSNAESN 100
           GCWVKLRF GSCISSRSKVDSSVSGT     ESKSTNDTS DQPAA V+S++TTSN ESN
Sbjct: 1   GCWVKLRFIGSCISSRSKVDSSVSGTICESTESKSTNDTSIDQPAALVVSTSTTSNTESN 60

Query: 101 SSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP 160
           SSTSKLEEELKVASRLRKFTFNDLK ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP
Sbjct: 61  SSTSKLEEELKVASRLRKFTFNDLKFATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP 120

Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
           GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH NLVKLIGYCIEDDQRLLVYEFMPRG
Sbjct: 121 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRG 180

Query: 221 SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY 280
           SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE ERPVIYRDFKTSNILLDA      
Sbjct: 181 SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEETERPVIYRDFKTSNILLDA------ 234

Query: 281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 340
                              DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT
Sbjct: 235 -------------------DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 275

Query: 341 GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE 400
           GHLTSRSDVYSFGVVLLEM+TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE
Sbjct: 276 GHLTSRSDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE 335

Query: 401 GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERI 460
           GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV ALKPLPNLKDMAS+SYYFQTMQAER+
Sbjct: 336 GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVNALKPLPNLKDMASTSYYFQTMQAERV 395

Query: 461 GSSPNTRNGIRAQGGSLSRNG--QRSLSIPNGSYASPYHHQFPHPSPKPN 508
           GSSPN RNG+R+Q G LSRNG  QRSLSIP+GS+ASPYH+Q+PH SPKPN
Sbjct: 396 GSSPNARNGVRSQAGLLSRNGHQQRSLSIPHGSHASPYHYQYPHKSPKPN 445

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|53689728|gb|AAU89742.1| serine/threonine protein kinase-like [Solanum tuberosum]

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/527 (80%), Positives = 444/527 (84%), Gaps = 56/527 (10%)

Query: 1   MGFDGENGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSKV 60
           +G DGE G+    SWD  KSK KKKK+          EEETGCW KL F GSCISSRSKV
Sbjct: 115 LGGDGEKGE----SWDVEKSKGKKKKEV--------TEEETGCWTKLWFIGSCISSRSKV 162

Query: 61  DSSVSGTSTHY--------------ESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKL 106
           DSS+SG STH               ESKSTN TSRDQP A +ISSTTTSNAESNSSTSKL
Sbjct: 163 DSSISGISTHCDKSTYVLTSCIALAESKSTN-TSRDQPVAPIISSTTTSNAESNSSTSKL 221

Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           EEELKV+SRLRKF FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV
Sbjct: 222 EEELKVSSRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 281

Query: 167 AVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL 226
           AVKTLNHDGLQ    W AEVNFLGDLVH NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL
Sbjct: 282 AVKTLNHDGLQVLSIWQAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL 341

Query: 227 FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
           FRRS+PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA            
Sbjct: 342 FRRSMPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA------------ 389

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS+
Sbjct: 390 -------------DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSK 436

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDVYSFGVVLLEM+TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRL+DPRLEGHFSIK
Sbjct: 437 SDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLVDPRLEGHFSIK 496

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNT 466
           GAQKAAQLAA CLSRDPKARP+MS+VVEALKPLPNLKDMASSSYYFQTMQA+R+GSSP+T
Sbjct: 497 GAQKAAQLAARCLSRDPKARPMMSDVVEALKPLPNLKDMASSSYYFQTMQADRVGSSPST 556

Query: 467 RNGIRAQGGSLSRNGQ---RSLSIPNGSYASPYHHQFPHPSPKPNGK 510
           +NG+R Q GS SRNGQ   RSLSIPNGS+ASPYH QFP  SPKPNGK
Sbjct: 557 KNGVRTQ-GSFSRNGQQHPRSLSIPNGSHASPYHQQFPQNSPKPNGK 602

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	511
TAIR|locus:2147805	493	AT5G15080 [Arabidopsis thalian	0.477	0.494	0.696	3.2e-175
TAIR|locus:2100282	490	AT3G01300 [Arabidopsis thalian	0.475	0.495	0.670	2.1e-169
TAIR|locus:2095517	453	AT3G28690 [Arabidopsis thalian	0.344	0.388	0.857	1.8e-159
TAIR|locus:2053240	423	PK1B "protein kinase 1B" [Arab	0.350	0.423	0.661	4.3e-111
TAIR|locus:2150019	410	AT5G01020 [Arabidopsis thalian	0.285	0.356	0.726	4.3e-111
TAIR|locus:2180127	389	NAK [Arabidopsis thaliana (tax	0.350	0.460	0.622	1.5e-110
TAIR|locus:2058847	426	APK2B "protein kinase 2B" [Ara	0.350	0.420	0.640	1.5e-106
TAIR|locus:2012492	426	APK2A "protein kinase 2A" [Ara	0.412	0.495	0.556	7.3e-105
TAIR|locus:2064712	462	RIPK "RPM1-induced protein kin	0.412	0.456	0.544	1.2e-102
TAIR|locus:2205714	412	AT1G26970 [Arabidopsis thalian	0.342	0.424	0.627	1.1e-101

TAIR|locus:2147805 AT5G15080 [Arabidopsis thaliana (taxid:3702)]

 Score = 883 (315.9 bits), Expect = 3.2e-175, Sum P(2) = 3.2e-175
 Identities = 174/250 (69%), Positives = 186/250 (74%)

Query:    41 TGCWVKLRFF-G-----XXXXXXXXXXXXXXXXXTHYESKSTNDTSRDQPAAAVIXXXXX 94
             +GCWVK RF  G                      T  ESKS N+ S DQP   V      
Sbjct:    46 SGCWVKFRFMIGCIPSKSDLDASSSSIYGSNCTVTTMESKSANEKSNDQPVGQVSSTTTT 105

Query:    95 XXXXXXXXXXKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENG 154
                        + EEL ++S LRKFTFNDLKL+TRNFRPESLLGEGGFGCVFKGWIEENG
Sbjct:   106 SNAESSSSTPVISEELNISSHLRKFTFNDLKLSTRNFRPESLLGEGGFGCVFKGWIEENG 165

Query:   155 TAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY 214
             TAPVKPGTGLTVAVKTLN DGLQGHKEWLAE+NFLG+L+H NLVKL+GYCIEDDQRLLVY
Sbjct:   166 TAPVKPGTGLTVAVKTLNPDGLQGHKEWLAEINFLGNLLHPNLVKLVGYCIEDDQRLLVY 225

Query:   215 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
             EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL+FLHEEA +PVIYRDFKTSNILLDA
Sbjct:   226 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDA 285

Query:   275 VRAENYGKFG 284
                     FG
Sbjct:   286 DYNAKLSDFG 295

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2100282 AT3G01300 [Arabidopsis thaliana (taxid:3702)]

 Score = 843 (301.8 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
 Identities = 163/243 (67%), Positives = 178/243 (73%)

Query:    42 GCWVKLRFFGXXXXXXXXXXXXXXXXXTHYESKSTNDTSRDQPAAAVIXXXXXXXXXXXX 101
             GCWVK R+                   +   S+S    S DQP   V             
Sbjct:    47 GCWVKFRYIVCCASSTSDVETSLTLSTSTVGSQSAIVQSNDQPVGPVSSTTTTSNAESSL 106

Query:   102 XXXKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPG 161
                 + EEL + S L+KF+F DLKLATRNFRPESLLGEGGFGCVFKGW+EENGTAPVKPG
Sbjct:   107 STPIISEELNIYSHLKKFSFIDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPG 166

Query:   162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
             TGLTVAVKTLN DGLQGHKEWLAE+N+LG+L+H NLVKL+GYCIEDDQRLLVYEFMPRGS
Sbjct:   167 TGLTVAVKTLNPDGLQGHKEWLAEINYLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGS 226

Query:   222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
             LENHLFRRSLPLPWSIRMKIALGAAKGL+FLHEEA +PVIYRDFKTSNILLD        
Sbjct:   227 LENHLFRRSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLS 286

Query:   282 KFG 284
              FG
Sbjct:   287 DFG 289

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2095517 AT3G28690 [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
 Identities = 151/176 (85%), Positives = 162/176 (92%)

Query:   109 ELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
             ELK +S+LR F FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV
Sbjct:    81 ELKYSSKLRIFMFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 140

Query:   169 KTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
             KTLN DGLQGHKEWLAE+NFLG+LVH +LVKL+GYC+E+DQRLLVYEFMPRGSLENHLFR
Sbjct:   141 KTLNPDGLQGHKEWLAEINFLGNLVHPSLVKLVGYCMEEDQRLLVYEFMPRGSLENHLFR 200

Query:   229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
             R+LPLPWS+RMKIALGAAKGLAFLHEEAE+PVIYRDFKTSNILLD         FG
Sbjct:   201 RTLPLPWSVRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG 256

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2053240 PK1B "protein kinase 1B" [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
 Identities = 121/183 (66%), Positives = 140/183 (76%)

Query:   105 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL 164
             + E E+  +  L+ FTF +LK ATRNFRP+S+LGEGGFG VFKGWI+E      KPGTG+
Sbjct:    54 RTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGV 113

Query:   165 TVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN 224
              +AVK LN DG QGH+EWLAEVN+LG   H NLVKLIGYC+ED+ RLLVYEFMPRGSLEN
Sbjct:   114 VIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLEN 173

Query:   225 HLFRRSL---PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
             HLFRR     PL W++R+K+ALGAAKGLAFLH  AE  VIYRDFKTSNILLD+       
Sbjct:   174 HLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLS 232

Query:   282 KFG 284
              FG
Sbjct:   233 DFG 235

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2150019 AT5G01020 [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
 Identities = 106/146 (72%), Positives = 127/146 (86%)

Query:   294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
             N +L  DY AKLSDFGLAK GP+GD+THVSTRVMGTYGYAAPEYVMTGHLT+RSDVYSFG
Sbjct:   204 NILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFG 263

Query:   354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
             VVLLEMLTGR+S+DK RP+ E NLV+WARP L ++R+  ++IDPRLE  +S++ AQKA  
Sbjct:   264 VVLLEMLTGRKSVDKTRPSKEQNLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACS 323

Query:   414 LAAHCLSRDPKARPLMSEVVEALKPL 439
             LA +CLS++PKARPLMS+VVE L+PL
Sbjct:   324 LAYYCLSQNPKARPLMSDVVETLEPL 349

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

TAIR|locus:2180127 NAK [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
 Identities = 114/183 (62%), Positives = 142/183 (77%)

Query:   105 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL 164
             + E E+   + L+ F+ ++LK ATRNFRP+S++GEGGFGCVFKGWI+E+  AP KPGTG+
Sbjct:    42 RTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGI 101

Query:   165 TVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN 224
              +AVK LN +G QGH+EWLAE+N+LG L H NLVKLIGYC+E++ RLLVYEFM RGSLEN
Sbjct:   102 VIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLEN 161

Query:   225 HLFRRSL---PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
             HLFRR     PL W+ R+++ALGAA+GLAFLH  A+  VIYRDFK SNILLD+       
Sbjct:   162 HLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLS 220

Query:   282 KFG 284
              FG
Sbjct:   221 DFG 223

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2058847 APK2B "protein kinase 2B" [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
 Identities = 116/181 (64%), Positives = 137/181 (75%)

Query:   105 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL 164
             + E E+  +  L+ FTFN+LK ATRNFRP+SLLGEGGFG VFKGWI+       KPG+G+
Sbjct:    57 RTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGI 116

Query:   165 TVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN 224
              VAVK L  +G QGHKEWL EVN+LG L H NLVKL+GYC+E + RLLVYEFMP+GSLEN
Sbjct:   117 VVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN 176

Query:   225 HLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
             HLFRR   PL W+IRMK+A+GAAKGL FLH+ A+  VIYRDFK +NILLDA        F
Sbjct:   177 HLFRRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDF 235

Query:   284 G 284
             G
Sbjct:   236 G 236

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2012492 APK2A "protein kinase 2A" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
 Identities = 119/214 (55%), Positives = 145/214 (67%)

Query:    73 SKSTNDTSRDQ-PAAAVIXXXXXXXXXXXXXXXKLEEELKVASRLRKFTFNDLKLATRNF 131
             SK ++ TSR   P+                   + E E+  +  L+ FTFN+LK AT+NF
Sbjct:    27 SKVSSKTSRSTGPSGLSTTSYSTDSSFGPLPTLRTEGEILSSPNLKAFTFNELKNATKNF 86

Query:   132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD 191
             R ++LLGEGGFGCVFKGWI++      +PG+G+ VAVK L  +G QGHKEWL EVN+LG 
Sbjct:    87 RQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQ 146

Query:   192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLA 250
             L H NLV L+GYC E + RLLVYEFMP+GSLENHLFRR   PL W+IRMK+A+GAAKGL 
Sbjct:   147 LSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLT 206

Query:   251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
             FLHE A+  VIYRDFK +NILLDA        FG
Sbjct:   207 FLHE-AKSQVIYRDFKAANILLDADFNAKLSDFG 239

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2064712 RIPK "RPM1-induced protein kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
 Identities = 116/213 (54%), Positives = 141/213 (66%)

Query:   294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
             N +L  DY AKLSDFGLAKDGPEGD THVSTRVMGT GYAAPEY+MTGHLT+RSDVYSFG
Sbjct:   222 NILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTARSDVYSFG 281

Query:   354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
             VVLLE+LTGRRS+DK R + E NLV+WARP L + R+  R++DPRLEG +S  GA+KAA 
Sbjct:   282 VVLLELLTGRRSVDKKRSSREQNLVDWARPMLNDPRKLSRIMDPRLEGQYSETGARKAAT 341

Query:   414 LAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQ 473
             LA  CLS  PK RP MS VV  L  L +  D+   ++ + T+         + R G + +
Sbjct:   342 LAYQCLSHRPKNRPCMSAVVSILNDLKDYNDIPMGTFTY-TVPNTPDNKEDDGRVGNKPR 400

Query:   474 GGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPK 506
               S   + Q+  S    S  SP     P P+ K
Sbjct:   401 KSSHHHHHQQQQSNHPRSSPSPTTKS-PSPTAK 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2205714 AT1G26970 [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
 Identities = 113/180 (62%), Positives = 139/180 (77%)

Query:   107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
             E EL  +  L+ FTFN+LK ATRNFRP+S++GEGGFG V+KGWI+E   +P KPG+G+ V
Sbjct:    59 EGELLASPTLKAFTFNELKTATRNFRPDSVIGEGGFGYVYKGWIDERTLSPSKPGSGMVV 118

Query:   167 AVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ-RLLVYEFMPRGSLENH 225
             AVK L  +G QGH++WLAEV+ LG L H+NLVKLIGYC + D  RLLVYE+MP+GSLENH
Sbjct:   119 AVKKLKEEGFQGHRQWLAEVDCLGRLHHMNLVKLIGYCSKGDHIRLLVYEYMPKGSLENH 178

Query:   226 LFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
             LFRR   P+PW  R+K+A+GAA+GLAFLHE A+  VIYRDFK SNILLD+        FG
Sbjct:   179 LFRRGAEPIPWRTRIKVAIGAARGLAFLHE-AQ--VIYRDFKASNILLDSEFNAKLSDFG 235

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LFP7	Y5158_ARATH	2, ., 7, ., 1, 1, ., 1	0.7142	0.9197	0.9533	yes	no
Q9SRH7	Y3130_ARATH	2, ., 7, ., 1, 1, ., 1	0.7194	0.8630	0.9	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.991
3rd Layer	2.7.11	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	511
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-49
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-47
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-47
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-46
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-45
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-43
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-41
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-32
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-31
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-29
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-27
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-26
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-24
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-24
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-23
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-23
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-22
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-22
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-22
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-22
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-22
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-22
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-21
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-21
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-21
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	9e-21
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-20
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-20
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-20
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-20
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-20
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-20
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	7e-20
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-19
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-19
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-19
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-19
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-19
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-19
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-19
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-19
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-18
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-18
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	5e-18
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-18
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-18
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-17
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-17
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-17
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-17
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-17
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-17
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-17
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-17
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-16
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-16
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-16
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-16
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-16
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-15
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-15
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-15
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-15
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-15
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-15
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-15
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-15
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	7e-15
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	7e-15
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-14
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-14
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-14
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-14
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-14
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-14
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-14
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-14
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	7e-14
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-14
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-14
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	9e-14
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-13
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-13
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-13
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-13
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-13
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-13
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-13
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-13
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-13
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-13
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	6e-13
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-13
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-12
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-12
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-12
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-12
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-12
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-12
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-12
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-12
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-12
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-12
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	6e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-12
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-12
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-12
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	8e-12
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-11
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-11
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	1e-11
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-11
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-11
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-11
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-11
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-11
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-11
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-11
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-11
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-11
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-11
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-11
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-11
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-11
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	8e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	9e-11
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-10
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-10
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-10
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-10
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-10
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-10
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-10
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-10
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	3e-10
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-10
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-10
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	5e-10
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-10
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	6e-10
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	6e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	6e-10
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-10
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-10
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-09
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-09
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-09
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-09
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-09
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-09
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-09
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-09
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-09
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-09
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-09
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-09
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-09
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-09
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-09
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-09
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	4e-09
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	9e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-08
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-08
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-08
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-08
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-08
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-08
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-08
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-08
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-08
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-08
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-07
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-07
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-07
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-07
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-07
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	4e-07
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	4e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	6e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-07
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-06
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-06
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-06
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	4e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	4e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-06
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	5e-06
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	6e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-06
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	6e-06
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	7e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-05
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-05
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-05
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-05
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-05
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	4e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	9e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	9e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-04
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-04
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	4e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-04
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	4e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-04
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	5e-04
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	5e-04
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	6e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	7e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	8e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	8e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.001
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	0.001
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.002
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.003
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.003
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.004
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.004
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  168 bits (429), Expect = 2e-49
 Identities = 76/302 (25%), Positives = 116/302 (38%), Gaps = 89/302 (29%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           LGEGGFG V+    ++ G           VA+K +  +      E  L E+  L  L H 
Sbjct: 1   LGEGGFGTVYLARDKKTGK---------KVAIKIIKKEDSSSLLEELLREIEILKKLNHP 51

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+VKL G   +++   LV E+   GSL++ L      L     ++I L   +GL +LH  
Sbjct: 52  NIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLH-- 109

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               +I+RD K  NILLD+                         +   KL+DFGL+K   
Sbjct: 110 -SNGIIHRDLKPENILLDSD------------------------NGKVKLADFGLSKLLT 144

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
                     ++GT  Y APE ++  G+ + +SD++S GV+L E+               
Sbjct: 145 SDKSL--LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------- 187

Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                                              +   L    L +DP+ RP   E++E
Sbjct: 188 ----------------------------------PELKDLIRKMLQKDPEKRPSAKEILE 213

Query: 435 AL 436
            L
Sbjct: 214 HL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  164 bits (417), Expect = 3e-47
 Identities = 89/306 (29%), Positives = 129/306 (42%), Gaps = 55/306 (17%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDL 192
              LGEG FG V+KG ++            + VAVKTL  D   Q  +E+L E   +  L
Sbjct: 4   GKKLGEGAFGEVYKGKLK-----GKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL 58

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+VKL+G C E++   +V E+M  G L ++L +    L  S  +  AL  A+G+ +L
Sbjct: 59  DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYL 118

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
                +  I+RD    N L+                          ++   K+SDFGL++
Sbjct: 119 E---SKNFIHRDLAARNCLVG-------------------------ENLVVKISDFGLSR 150

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
           D  + D             + APE +  G  TS+SDV+SFGV+L E+ T         P 
Sbjct: 151 DLYDDDYYRKRGG-KLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQ-----PY 204

Query: 373 GEHNLVEWARPHL--GERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS 430
              +  E    +L  G R        P L              L   C + DP+ RP  S
Sbjct: 205 PGMSNEE-VLEYLKNGYRLPQPPNCPPEL------------YDLMLQCWAEDPEDRPTFS 251

Query: 431 EVVEAL 436
           E+VE L
Sbjct: 252 ELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  164 bits (417), Expect = 4e-47
 Identities = 90/309 (29%), Positives = 129/309 (41%), Gaps = 58/309 (18%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNF 188
           +     LG G FG V+K             GTG  VAVK L       +  +    E+  
Sbjct: 1   YELLRKLGSGSFGTVYKA---------KHKGTGKIVAVKILKKRSEKSKKDQTARREIRI 51

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           L  L H N+V+LI    + D   LV E+   G L      R  PL      KIAL   +G
Sbjct: 52  LRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDL-FDYLSRGGPLSEDEAKKIALQILRG 110

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L +LH      +I+RD K  NILLD                         ++   K++DF
Sbjct: 111 LEYLHSNG---IIHRDLKPENILLD-------------------------ENGVVKIADF 142

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMD 367
           GLAK       + ++T V GT  Y APE ++ G     + DV+S GV+L E+LTG+    
Sbjct: 143 GLAKKL-LKSSSSLTTFV-GTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGK---- 196

Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF--SIKGAQKAAQLAAHCLSRDPKA 425
                            L + +   R++ P LE        G+++A  L   CL++DP  
Sbjct: 197 ---------PPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSK 247

Query: 426 RPLMSEVVE 434
           RP   E+++
Sbjct: 248 RPTAEEILQ 256

Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  162 bits (413), Expect = 1e-46
 Identities = 93/307 (30%), Positives = 133/307 (43%), Gaps = 56/307 (18%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDL 192
              LGEG FG V+KG ++         G  + VAVKTL  D   Q  +E+L E   +  L
Sbjct: 4   GKKLGEGAFGEVYKGTLK-----GKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL 58

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAF 251
            H N+VKL+G C E++  ++V E+MP G L ++L   R   L  S  +  AL  A+G+ +
Sbjct: 59  DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEY 118

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L     +  I+RD    N L+                           +   K+SDFGL+
Sbjct: 119 LE---SKNFIHRDLAARNCLVGE-------------------------NLVVKISDFGLS 150

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           +D  + D   V         + APE +  G  TS+SDV+SFGV+L E+ T         P
Sbjct: 151 RDLYDDDYYKVKGG-KLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEE-----P 204

Query: 372 NGEHNLVEWARPHL--GERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
               +  E    +L  G R        P L             +L   C + DP+ RP  
Sbjct: 205 YPGMSNAE-VLEYLKKGYRLPKPPNCPPEL------------YKLMLQCWAEDPEDRPTF 251

Query: 430 SEVVEAL 436
           SE+VE L
Sbjct: 252 SELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  159 bits (405), Expect = 2e-45
 Identities = 91/307 (29%), Positives = 135/307 (43%), Gaps = 62/307 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG FG V+KG ++         GT   VAVKTL      +  +E+L E + +  L H 
Sbjct: 7   LGEGAFGEVYKGTLK-----GDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHP 61

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V+L+G C + +   +V E+MP G L + L +    L     +++AL  AKG+ +L   
Sbjct: 62  NIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLE-- 119

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             +  ++RD    N L+                          ++   K+SDFGL++D  
Sbjct: 120 -SKNFVHRDLAARNCLVT-------------------------ENLVVKISDFGLSRDIY 153

Query: 316 EGDKTHVST------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           E D            + M      APE +  G  TS+SDV+SFGV+L E+ T        
Sbjct: 154 EDDYYRKRGGGKLPIKWM------APESLKDGKFTSKSDVWSFGVLLWEIFTLGEQ---- 203

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
            P    +  E     L +    YRL  PR E         +  +L   C + DP+ RP  
Sbjct: 204 -PYPGMSNEE-VLELLEDG---YRL--PRPEN-----CPDELYELMLQCWAYDPEDRPTF 251

Query: 430 SEVVEAL 436
           SE+VE L
Sbjct: 252 SELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  155 bits (393), Expect = 1e-43
 Identities = 94/320 (29%), Positives = 133/320 (41%), Gaps = 79/320 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHL 195
           LGEG FG V+KG          K G    VAVKTL  D   +  K++L E   +  L H 
Sbjct: 3   LGEGAFGEVYKG------KLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHP 56

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP--------LPWSIRMKIALGAAK 247
           N+V+L+G C E++   LV E+M  G L ++L +            L     +  A+  AK
Sbjct: 57  NVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK 116

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+ +L     +  ++RD    N L+                           D   K+SD
Sbjct: 117 GMEYLA---SKKFVHRDLAARNCLVGE-------------------------DLVVKISD 148

Query: 308 FGLAKDGPEGDKTHVST------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           FGL++D  + D     T      R M      APE +  G  TS+SDV+SFGV+L E+ T
Sbjct: 149 FGLSRDVYDDDYYRKKTGGKLPIRWM------APESLKDGIFTSKSDVWSFGVLLWEIFT 202

Query: 362 GRRSMDKNRPNGE---HNL-VEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH 417
                      G      L  E    +L   R+ YRL  P    +       +  +L   
Sbjct: 203 ----------LGATPYPGLSNEEVLEYL---RKGYRLPKPE---YCP----DELYELMLS 242

Query: 418 CLSRDPKARPLMSEVVEALK 437
           C   DP+ RP  SE+VE L+
Sbjct: 243 CWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  149 bits (378), Expect = 1e-41
 Identities = 84/307 (27%), Positives = 125/307 (40%), Gaps = 60/307 (19%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFL 189
           +     LGEG FG V+               TG  VA+K +    ++  +E  L E+  L
Sbjct: 1   YEILEKLGEGSFGKVYLA---------RDKKTGKLVAIKVIKKKKIKKDRERILREIKIL 51

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKG 248
             L H N+V+L     ++D+  LV E+   G L + L  R  L      R          
Sbjct: 52  KKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDE-AR-FYLRQILSA 109

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L +LH    + +++RD K  NILLD                         +D + KL+DF
Sbjct: 110 LEYLHS---KGIVHRDLKPENILLD-------------------------EDGHVKLADF 141

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           GLA+    G+K    T V GT  Y APE ++        D++S GV+L E+LTG+     
Sbjct: 142 GLARQLDPGEKLT--TFV-GTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK----- 193

Query: 369 NRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             P  G+  L+E  +     +  F     P  E   S     +A  L    L +DP+ R 
Sbjct: 194 -PPFPGDDQLLELFKKIGKPKPPF-----PPPEWDIS----PEAKDLIRKLLVKDPEKRL 243

Query: 428 LMSEVVE 434
              E ++
Sbjct: 244 TAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  124 bits (313), Expect = 2e-32
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 40/233 (17%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           F     +G+GGFG V+K           K  TG  VA+K +  +  +  ++ + E+  L 
Sbjct: 2   FEILEKIGKGGFGEVYKAR--------HKR-TGKEVAIKVIKLESKEKKEKIINEIQILK 52

Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
              H N+VK  G  ++ D+  +V EF   GSL++ L   +  L  S    +     KGL 
Sbjct: 53  KCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLE 112

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      +I+RD K +NILL                           D   KL DFGL
Sbjct: 113 YLHSNG---IIHRDIKAANILLT-------------------------SDGEVKLIDFGL 144

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           +    +    +    ++GT  + APE +       ++D++S G+  +E+  G+
Sbjct: 145 SAQLSDTKARN---TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  119 bits (302), Expect = 7e-31
 Identities = 81/297 (27%), Positives = 128/297 (43%), Gaps = 59/297 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLV 193
           LLG G FG V+   ++++        TG  +AVK+  L+ D  +  +    E+  L  L 
Sbjct: 7   LLGRGSFGSVYLA-LDKD--------TGELMAVKSVELSGDSEEELEALEREIRILSSLQ 57

Query: 194 HLNLVKLIGYCIEDDQR-LLVY-EFMPRGSLENHLFRRSLPLPWS-IRMKIALGAAKGLA 250
           H N+V+  G   ++++  L ++ E++  GSL + L ++   LP   IR K      +GLA
Sbjct: 58  HPNIVRYYGSERDEEKNTLNIFLEYVSGGSL-SSLLKKFGKLPEPVIR-KYTRQILEGLA 115

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      +++RD K +NIL+D                          D   KL+DFG 
Sbjct: 116 YLHS---NGIVHRDIKGANILVD-------------------------SDGVVKLADFGC 147

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
           AK   + +    +  V GT  + APE +        +D++S G  ++EM TG+       
Sbjct: 148 AKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK------P 201

Query: 371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           P  E      A   +G          P +  H S    ++A      CL RDPK RP
Sbjct: 202 PWSELGNPMAALYKIG-----SSGEPPEIPEHLS----EEAKDFLRKCLRRDPKKRP 249

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  115 bits (289), Expect = 7e-29
 Identities = 72/230 (31%), Positives = 102/230 (44%), Gaps = 39/230 (16%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
           LGEG FG V     +  G       TG  VAVK+LNH G + H  ++  E+  L  L H 
Sbjct: 12  LGEGHFGKVELCRYDPLGD-----NTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHE 66

Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           N+VK  G C +   R   L+ E++P GSL ++L R    +     +  +    KG+ +L 
Sbjct: 67  NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG 126

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               +  I+RD    NIL++                          +   K+SDFGLAK 
Sbjct: 127 S---QRYIHRDLAARNILVE-------------------------SEDLVKISDFGLAKV 158

Query: 314 GPEGDKTHVST--RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            PE    +          + YA PE + T   +S SDV+SFGV L E+ T
Sbjct: 159 LPEDKDYYYVKEPGESPIFWYA-PECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 3e-27
 Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 46/232 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLV 193
           L+G G FG V+KG   E         TG  VA+K   L     +  K  + E++ L +L 
Sbjct: 7   LIGRGAFGVVYKGLNLE---------TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK 57

Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
           H N+VK IG  IE    L ++ E+   GSL   + ++  P P S+         +GLA+L
Sbjct: 58  HPNIVKYIG-SIETSDSLYIILEYAENGSLRQ-IIKKFGPFPESLVAVYVYQVLQGLAYL 115

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           HE+    VI+RD K +NIL          K G                   KL+DFG+A 
Sbjct: 116 HEQG---VIHRDIKAANILT--------TKDGVV-----------------KLADFGVAT 147

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYV-MTGHLTSRSDVYSFGVVLLEMLTGR 363
              +  K      V+GT  + APE + M+G  T+ SD++S G  ++E+LTG 
Sbjct: 148 KLNDVSKD--DASVVGTPYWMAPEVIEMSGASTA-SDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  110 bits (276), Expect = 1e-26
 Identities = 98/401 (24%), Positives = 145/401 (36%), Gaps = 67/401 (16%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEV 186
           ++R    LGEG FG V+     +             VA+K L        KE    L E+
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRK------------LVALKVLAKKLESKSKEVERFLREI 48

Query: 187 NFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIAL 243
             L  L H  N+VKL  +  ++    LV E++  GSLE+ L    R  PL  S  + I  
Sbjct: 49  QILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILA 108

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                L +LH    + +I+RD K  NILLD                              
Sbjct: 109 QILSALEYLHS---KGIIHRDIKPENILLDR------------------------DGRVV 141

Query: 304 KLSDFGLAK----DGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVL 356
           KL DFGLAK     G       + +  +GT GY APE ++     + +S SD++S G+ L
Sbjct: 142 KLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITL 201

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
            E+LTG    +  + +   +                  + P      S    + A+ L  
Sbjct: 202 YELLTGLPPFEGEKNSSATSQT-LKIILELPTPSLASPLSPSNPELIS----KAASDLLK 256

Query: 417 HCLSRDPKARPLMSEVVE-ALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQ-- 473
             L++DPK R   S  +   L     LK+   S        A    S P +   + +   
Sbjct: 257 KLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALISSLN 316

Query: 474 -------GGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPKP 507
                     L  +       PNG  +SP++      S   
Sbjct: 317 SLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTAS 357

Length = 384

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  103 bits (258), Expect = 1e-24
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 70/318 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           LG+G FG V++G         VK      VA+KT+N +     + E+L E + + +    
Sbjct: 14  LGQGSFGMVYEG----LAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH 69

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--------FRRSLPLPWSIRM-KIALGAA 246
           ++V+L+G        L+V E M +G L+++L            L  P   +  ++A   A
Sbjct: 70  HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIA 129

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            G+A+L   A +  ++RD         A R                 N M+ +D   K+ 
Sbjct: 130 DGMAYL---AAKKFVHRDL--------AAR-----------------NCMVAEDLTVKIG 161

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           DFG+ +D  E D      + +    + APE +  G  T++SDV+SFGVVL EM T     
Sbjct: 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT----- 216

Query: 367 DKNRPNGEHNLVEWARPHLG----ERRRFYRLIDPRLEGHFS--IKGAQKAAQLAAHCLS 420
                     L E  +P+ G    E  +F  +ID    GH         K  +L   C  
Sbjct: 217 ----------LAE--QPYQGLSNEEVLKF--VID---GGHLDLPENCPDKLLELMRMCWQ 259

Query: 421 RDPKARPLMSEVVEALKP 438
            +PK RP   E+V +LK 
Sbjct: 260 YNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  102 bits (255), Expect = 1e-24
 Identities = 80/303 (26%), Positives = 126/303 (41%), Gaps = 55/303 (18%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
            +G+G FG V+KG ++              VAVKT         K  +L E   L    H
Sbjct: 2   KIGKGNFGDVYKGVLK----------GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH 51

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+VKLIG C++     +V E +P GSL   L ++   L     ++++L AA G+ +L  
Sbjct: 52  PNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE- 110

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD    N L+                     NN+L      K+SDFG++++ 
Sbjct: 111 --SKNCIHRDLAARNCLVGE-------------------NNVL------KISDFGMSREE 143

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
             G  T           + APE +  G  TS SDV+S+G++L E  +   +      N +
Sbjct: 144 EGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ 203

Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  R  +      YR+  P+L          +  +L   C + DP+ RP  SE+  
Sbjct: 204 ------TRERI---ESGYRMPAPQLCPE-------EIYRLMLQCWAYDPENRPSFSEIYN 247

Query: 435 ALK 437
            L+
Sbjct: 248 ELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 99.0 bits (247), Expect = 2e-23
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 53/234 (22%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH 194
           + +G+G FG V  G              G  VAVK L  D       +LAE + +  L H
Sbjct: 12  ATIGKGEFGDVMLGDYR-----------GQKVAVKCLKDDSTAAQA-FLAEASVMTTLRH 59

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLH 253
            NLV+L+G  ++ +   +V E+M +GSL ++L  R    +  + ++  AL   +G+ +L 
Sbjct: 60  PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
              E+  ++RD    N+L+                          +D  AK+SDFGLAK+
Sbjct: 120 ---EKNFVHRDLAARNVLVS-------------------------EDLVAKVSDFGLAKE 151

Query: 314 ---GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR 363
              G +  K  V         + APE +     +++SDV+SFG++L E+ + GR
Sbjct: 152 ASQGQDSGKLPVK--------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 99.2 bits (247), Expect = 3e-23
 Identities = 91/323 (28%), Positives = 135/323 (41%), Gaps = 53/323 (16%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVN 187
           R  +   +LGEG FG V     +     P   GTG  VAVKTL  +  Q +   W  E+N
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYD-----PANDGTGEMVAVKTLKRECGQQNTSGWKKEIN 58

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
            L  L H N+VK  G C E   +   L+ E++P GSL ++L +  L L  +  +  A   
Sbjct: 59  ILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNL--AQLLLFAQQI 116

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            +G+A+LH +     I+RD    N+LLD                          D   K+
Sbjct: 117 CEGMAYLHSQH---YIHRDLAARNVLLD-------------------------NDRLVKI 148

Query: 306 SDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
            DFGLAK  PEG + + V         + A E +     +  SDV+SFGV L E+LT   
Sbjct: 149 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT-HC 207

Query: 365 SMDKNRPNGEHNLVEWARPHLGERR------RFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
              ++ P     ++   +  +   R      R  RL  P+          Q+   L  +C
Sbjct: 208 DSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPK-------NCPQEVYILMKNC 260

Query: 419 LSRDPKARPLMSEVVEALKPLPN 441
              + K RP    ++  LK + +
Sbjct: 261 WETEAKFRPTFRSLIPILKEMHH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 96.7 bits (241), Expect = 1e-22
 Identities = 67/232 (28%), Positives = 97/232 (41%), Gaps = 44/232 (18%)

Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLV 193
            LG+G FG V +G W    G         + VAVK L  D L     ++L E   +  L 
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKV-------IPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD 54

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFL 252
           H NL++L G  +     ++V E  P GSL + L + +L     S     A+  A G+ +L
Sbjct: 55  HENLIRLYG-VVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL 113

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
                +  I+RD    NILL                           D   K+ DFGL +
Sbjct: 114 ES---KRFIHRDLAARNILL-------------------------ASDDKVKIGDFGLMR 145

Query: 313 DGPEGDKTHVST---RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             P+ +  +V     +V   + + APE + T   +  SDV+ FGV L EM T
Sbjct: 146 ALPQNEDHYVMEEHLKV--PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 97.1 bits (242), Expect = 1e-22
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 50/240 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLVH 194
           LGEG FG V+KG  E  G       T  +VA+KTL  N +  +  +E+  E   + DL H
Sbjct: 13  LGEGAFGKVYKG--ELTGPNERLSAT--SVAIKTLKENAEP-KVQQEFRQEAELMSDLQH 67

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRM 239
            N+V L+G C ++    +++E++  G L   L R S                 L  S  +
Sbjct: 68  PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            IA+  A G+ +L   +    ++RD    N L               +  GL        
Sbjct: 128 HIAIQIAAGMEYL---SSHHFVHRDLAARNCL---------------VGEGL-------- 161

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
               K+SDFGL++D    D   V ++ +    +  PE ++ G  T+ SD++SFGVVL E+
Sbjct: 162 --TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 96.0 bits (240), Expect = 2e-22
 Identities = 74/235 (31%), Positives = 100/235 (42%), Gaps = 53/235 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPV-KPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDL 192
           LG+G FG V            V K  TG   A+K L    +   KE    L E N L  +
Sbjct: 1   LGKGSFGKVLL----------VRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI 50

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR-SLPLPWSIRM--KIALGAAKG 248
            H  +VKL  Y  + +++L LV E+ P G L +HL +        +     +I L     
Sbjct: 51  NHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLA---- 105

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L +LH      +IYRD K  NILLD                          D + KL+DF
Sbjct: 106 LEYLHSLG---IIYRDLKPENILLD-------------------------ADGHIKLTDF 137

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           GLAK+      +  +T   GT  Y APE ++        D +S GV+L EMLTG+
Sbjct: 138 GLAKELSSEG-SRTNTFC-GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 96.7 bits (241), Expect = 2e-22
 Identities = 70/240 (29%), Positives = 98/240 (40%), Gaps = 48/240 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLT-VAVKTLNHDGL-QGHKEWLAEVNFLGDLVH 194
           LGEG FG VF G         ++P      VAVKTL         K++  E   L +  H
Sbjct: 13  LGEGAFGKVFLGECYH-----LEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH 67

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL------FRRSL-------PLPWSIRMKI 241
            N+VK  G C E D  ++V+E+M  G L   L                   L  S  ++I
Sbjct: 68  ENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI 127

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
           A+  A G+ +L   A +  ++RD  T N L+                           D 
Sbjct: 128 AVQIASGMVYL---ASQHFVHRDLATRNCLVGY-------------------------DL 159

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             K+ DFG+++D    D   V    M    +  PE +M    T+ SDV+SFGVVL E+ T
Sbjct: 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 95.6 bits (238), Expect = 4e-22
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 50/252 (19%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVH 194
           LG G FG V+KG WI E     VK    + VA+K L  +   + +KE L E   +  + H
Sbjct: 15  LGSGAFGTVYKGVWIPEG--EKVK----IPVAIKVLREETSPKANKEILDEAYVMASVDH 68

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL------FRRSLPLPWSIRMKIALGAAKG 248
            ++V+L+G C+   Q  L+ + MP G L +++            L W +++      AKG
Sbjct: 69  PHVVRLLGICL-SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQI------AKG 121

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           +++L E   + +++RD    N+L   V+   +                       K++DF
Sbjct: 122 MSYLEE---KRLVHRDLAARNVL---VKTPQH----------------------VKITDF 153

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD 367
           GLAK     +K + +        + A E ++    T +SDV+S+GV + E++T G +  +
Sbjct: 154 GLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213

Query: 368 KNRPNGEHNLVE 379
                   +L+E
Sbjct: 214 GIPAVEIPDLLE 225

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 95.4 bits (237), Expect = 5e-22
 Identities = 84/300 (28%), Positives = 127/300 (42%), Gaps = 60/300 (20%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDLVH 194
           +LG+G +G V+ G   +     VK      V + T N    +   E L  EV+ L  L H
Sbjct: 7   VLGKGAYGTVYCGLTNQGQLIAVK-----QVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +N+V+ +G C++D+   +  EF+P GS+ + L  R  PLP  +  K       G+A+LH 
Sbjct: 62  VNIVQYLGTCLDDNTISIFMEFVPGGSISSIL-NRFGPLPEPVFCKYTKQILDGVAYLHN 120

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD- 313
                V++RD K +N+                         ML  +   KL DFG A+  
Sbjct: 121 NC---VVHRDIKGNNV-------------------------MLMPNGIIKLIDFGCARRL 152

Query: 314 ---GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR---RSMD 367
              G  G  +++   + GT  + APE +       +SD++S G  + EM TG+    SMD
Sbjct: 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD 212

Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           +            A  ++G  R       PRL   FS      A      CL+RD   RP
Sbjct: 213 RLA----------AMFYIGAHRGLM----PRLPDSFS----AAAIDFVTSCLTRDQHERP 254

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 98.0 bits (244), Expect = 2e-21
 Identities = 93/330 (28%), Positives = 143/330 (43%), Gaps = 70/330 (21%)

Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDG 175
           +  T ND+  + +    E+++  G  G  +KG   +NG   V         VK +N  + 
Sbjct: 681 KSITINDILSSLKE---ENVISRGKKGASYKGKSIKNGMQFV---------VKEINDVNS 728

Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
           +       +E+  +G L H N+VKLIG C  +    L++E++   +L   L      L W
Sbjct: 729 IP-----SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL----RNLSW 779

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
             R KIA+G AK L FLH      V+  +     I++D       GK    +   L    
Sbjct: 780 ERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID-------GKDEPHLRLSL--PG 830

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
           +L  D    +S                         Y APE   T  +T +SD+Y FG++
Sbjct: 831 LLCTDTKCFISS-----------------------AYVAPETRETKDITEKSDIYGFGLI 867

Query: 356 LLEMLTGRRSMDKNRPNGEH-NLVEWAR-----PHLGERRRFYRLIDPRLEGHFSIKGAQ 409
           L+E+LTG+   D     G H ++VEWAR      HL         IDP + G  S+   +
Sbjct: 868 LIELLTGKSPADAE--FGVHGSIVEWARYCYSDCHLD------MWIDPSIRGDVSVNQNE 919

Query: 410 --KAAQLAAHCLSRDPKARPLMSEVVEALK 437
             +   LA HC + DP ARP  ++V++ L+
Sbjct: 920 IVEVMNLALHCTATDPTARPCANDVLKTLE 949

Length = 968

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 93.1 bits (231), Expect = 2e-21
 Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 58/301 (19%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V+ G W+E+             VA+KT+  +G    ++++ E   +  L H 
Sbjct: 12  IGSGQFGLVWLGYWLEKR-----------KVAIKTI-REGAMSEEDFIEEAQVMMKLSHP 59

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C E     LV+EFM  G L ++L  +         + + L   +G+A+L   
Sbjct: 60  KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 120 N---VIHRDLAARNCLVG-------------------------ENQVVKVSDFGMTRFVL 151

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +++PE       +S+SDV+SFGV++ E+ +  ++  +NR N E 
Sbjct: 152 D-DQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE- 209

Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE            +RL  PRL        +Q   +L  HC    P+ RP  S ++  
Sbjct: 210 -VVE-------TINAGFRLYKPRL-------ASQSVYELMQHCWKERPEDRPSFSLLLHQ 254

Query: 436 L 436
           L
Sbjct: 255 L 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 92.9 bits (231), Expect = 3e-21
 Identities = 69/236 (29%), Positives = 103/236 (43%), Gaps = 49/236 (20%)

Query: 131 FRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           F  E  LG G FG V++G W              + VA+K L  D L   +++  EV  L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWK-----------NRVRVAIKILKSDDLLKQQDFQKEVQAL 56

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR----RSLPLPWSIRMKIALGA 245
             L H +L+ L   C   +   ++ E M +GSL     R    + LP+   I M  A   
Sbjct: 57  KRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL-AFLRSPEGQVLPVASLIDM--ACQV 113

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A+G+A+L E   +  I+RD    NIL+                          +D   K+
Sbjct: 114 AEGMAYLEE---QNSIHRDLAARNILVG-------------------------EDLVCKV 145

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +DFGLA+   E        ++   Y + APE    G  +++SDV+SFG++L EM T
Sbjct: 146 ADFGLARLIKEDVYLSSDKKI--PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 91.4 bits (227), Expect = 9e-21
 Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 67/298 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           +G+G FG VFK          V+       A+K ++   +     +E + E   L  L  
Sbjct: 8   IGKGSFGVVFKV---------VRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS 58

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLP----WSIRMKIALGAAKGL 249
             +++     ++  +  +V E+   G L   L  +R  PLP    W   ++I LG    L
Sbjct: 59  SYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG----L 114

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
           A LH    + +++RD K+ N+ LDA                           N K+ D G
Sbjct: 115 AHLHS---KKILHRDIKSLNLFLDA-------------------------YDNVKIGDLG 146

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           +AK     D T+ +  ++GT  Y +PE         +SDV++ GVVL E  TG+   D  
Sbjct: 147 VAK--LLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDA- 203

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             N +  L+           +  R + P +   +S    Q+ AQL   CL++D + RP
Sbjct: 204 --NNQGALI----------LKIIRGVFPPVSQMYS----QQLAQLIDQCLTKDYRQRP 245

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 91.3 bits (227), Expect = 1e-20
 Identities = 85/310 (27%), Positives = 130/310 (41%), Gaps = 73/310 (23%)

Query: 136 LLGEGGFGCVFKGWIEENGT-APVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH 194
           LLG G FG V++G   ++G    VK      V++      G +  K+   E+  L  L H
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVK-----EVSLADDGQTGQEAVKQLEQEIALLSKLQH 61

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS-IRM---KIALGAAKGLA 250
            N+V+ +G   E+D   +  E +P GSL   L ++    P   IR+   +I L    GL 
Sbjct: 62  PNIVQYLGTEREEDNLYIFLELVPGGSLAK-LLKKYGSFPEPVIRLYTRQILL----GLE 116

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH   +R  ++RD K +NIL+D                    N ++      KL+DFG+
Sbjct: 117 YLH---DRNTVHRDIKGANILVDT-------------------NGVV------KLADFGM 148

Query: 311 AKDGPEGDKTHVSTRVM-----GTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRR 364
           AK         V          G+  + APE +   G     +D++S G  +LEM TG+ 
Sbjct: 149 AK--------QVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK- 199

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                 P  +   V  A   +G  +       P +  H S     +A      CL RDP 
Sbjct: 200 -----PPWSQLEGVA-AVFKIGRSKEL-----PPIPDHLS----DEAKDFILKCLQRDPS 244

Query: 425 ARPLMSEVVE 434
            RP  +E++E
Sbjct: 245 LRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 92/303 (30%), Positives = 127/303 (41%), Gaps = 79/303 (26%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V+ G W   NGT  V        AVKTL   G    + +L E   +  L H 
Sbjct: 14  LGAGQFGEVWMGTW---NGTTKV--------AVKTLK-PGTMSPEAFLQEAQIMKKLRHD 61

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
            LV+L   C E++   +V E+M +GSL + L     + L LP  + M  A   A+G+A+L
Sbjct: 62  KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM--AAQIAEGMAYL 119

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
                R  I+RD    NIL+     EN                        K++DFGLA+
Sbjct: 120 ES---RNYIHRDLAARNILVG----ENL---------------------VCKIADFGLAR 151

Query: 313 -------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
                     EG K  +         + APE    G  T +SDV+SFG++L E++T  R 
Sbjct: 152 LIEDDEYTAREGAKFPIK--------WTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRV 203

Query: 366 MDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                P  G  N     R  L +  R YR+  PR          ++   L   C  +DP+
Sbjct: 204 -----PYPGMTN-----REVLEQVERGYRM--PRPPNC-----PEELYDLMLQCWDKDPE 246

Query: 425 ARP 427
            RP
Sbjct: 247 ERP 249

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 90.7 bits (225), Expect = 2e-20
 Identities = 66/254 (25%), Positives = 104/254 (40%), Gaps = 54/254 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNF 188
           N      +G+G FG VF+      G  P +P T   VAVK L  +       ++  E   
Sbjct: 6   NIEYVRDIGQGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAAL 61

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------ 230
           + +  H N+VKL+G C       L++E+M  G L   L  RS                  
Sbjct: 62  MAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCG 121

Query: 231 ---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI 287
              LPL  + ++ IA   A G+A+L   +ER  ++RD  T N L+               
Sbjct: 122 LNPLPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVG-------------- 164

Query: 288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS 347
                      ++   K++DFGL+++    D    S        +  PE +     T+ S
Sbjct: 165 -----------ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTES 213

Query: 348 DVYSFGVVLLEMLT 361
           DV+++GVVL E+ +
Sbjct: 214 DVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 89.9 bits (223), Expect = 3e-20
 Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 41/237 (17%)

Query: 136 LLGEGGFGCVFKGW---IEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGD 191
            LG G FG V++G    I   G+ P++      VAVKTL      Q  KE+L E + + +
Sbjct: 2   FLGSGAFGEVYEGTATDILGPGSGPIR------VAVKTLRKGATDQEKKEFLKEAHLMSN 55

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-------FRRSLPLPWSIRMKIALG 244
             H N+VKL+G C+ ++ + ++ E M  G L ++L       F   L L     + I L 
Sbjct: 56  FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLD 114

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            AKG  +L +      I+RD    N L   V  + Y                   D   K
Sbjct: 115 VAKGCVYLEQMH---FIHRDLAARNCL---VSEKGYDA-----------------DRVVK 151

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           + DFGLA+D  + D        +    + APE ++ G  T++SDV+SFGV++ E+LT
Sbjct: 152 IGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 90.1 bits (224), Expect = 3e-20
 Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 59/308 (19%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW--LAEVNFLGD 191
           E ++G G FG V +G ++  G   +       VA+KTL   G    +    L E + +G 
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEI------DVAIKTL-KAGSSDKQRLDFLTEASIMGQ 61

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
             H N+++L G   +    +++ E+M  GSL+  L            + +  G A G+ +
Sbjct: 62  FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKY 121

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   +E   ++RD    NIL++                          +   K+SDFGL+
Sbjct: 122 L---SEMNYVHRDLAARNILVN-------------------------SNLVCKVSDFGLS 153

Query: 312 K--DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           +  +  E   T    ++     + APE +     TS SDV+SFG+V+ E+++        
Sbjct: 154 RRLEDSEATYTTKGGKI--PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS-------- 203

Query: 370 RPNGEHNLVEWARPH-LGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
              GE    + +    +      YRL  P               QL   C  +D   RP 
Sbjct: 204 --YGERPYWDMSNQDVIKAVEDGYRLPPPM-------DCPSALYQLMLDCWQKDRNERPT 254

Query: 429 MSEVVEAL 436
            S++V  L
Sbjct: 255 FSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 90.1 bits (224), Expect = 3e-20
 Identities = 67/236 (28%), Positives = 100/236 (42%), Gaps = 57/236 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG G  G V K           +P TG  +AVKT+  +      K+ L E++ L      
Sbjct: 9   LGAGNSGVVSK--------VLHRP-TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSP 59

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            +V   G    +    +  E+M  GSL+  L      +P  I  KIA+   KGL +LHE 
Sbjct: 60  YIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE- 118

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +  +I+RD K SNIL+++ R +                         KL DFG      
Sbjct: 119 -KHKIIHRDVKPSNILVNS-RGQ------------------------IKLCDFG------ 146

Query: 316 EGDKTHVSTRVM--------GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
                 VS +++        GT  Y APE +     + +SD++S G+ L+E+ TGR
Sbjct: 147 ------VSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 88.9 bits (221), Expect = 7e-20
 Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 46/231 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V KG          K G  + VAVKTL       G KE+L E + +  L H 
Sbjct: 3   LGHGNFGSVVKGVYLM------KSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHP 56

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            +V+LIG C  +   +LV E  P G L  +L +R   +P S   ++A   A G+A+L  E
Sbjct: 57  CIVRLIGVCKGE-PLMLVMELAPLGPLLKYLKKRRE-IPVSDLKELAHQVAMGMAYL--E 112

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++  V +RD    N+LL                            + AK+SDFG+++   
Sbjct: 113 SKHFV-HRDLAARNVLLVN-------------------------RHQAKISDFGMSRALG 146

Query: 316 EGDKTHVSTRVMGTYG-----YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            G   + +T    T G     + APE +  G  +S+SDV+S+GV L E  +
Sbjct: 147 AGSDYYRAT----TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 88.9 bits (220), Expect = 1e-19
 Identities = 72/241 (29%), Positives = 102/241 (42%), Gaps = 49/241 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E    +P K    + VAVK L    L   K++  E   L +L H +
Sbjct: 13  LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP----------------LPWSIRMK 240
           +VK  G C + D  ++V+E+M  G L N   R   P                L  S  + 
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 127

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           IA   A G+ +L   A +  ++RD  T N L+                      N+L   
Sbjct: 128 IASQIASGMVYL---ASQHFVHRDLATRNCLVG--------------------ANLL--- 161

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFG+++D    D   V    M    +  PE +M    T+ SDV+SFGV+L E+ 
Sbjct: 162 --VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 219

Query: 361 T 361
           T
Sbjct: 220 T 220

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 88.7 bits (220), Expect = 1e-19
 Identities = 83/320 (25%), Positives = 131/320 (40%), Gaps = 69/320 (21%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
           +LGEG FG V +G + ++  + +K      VAVKT+  D       +E+L+E   + D  
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLK------VAVKTMKLDIHTYSEIEEFLSEAACMKDFD 59

Query: 194 HLNLVKLIGYCIEDDQR------LLVYEFMPRGSLENHLFRRSLP-----LPWSIRMKIA 242
           H N++KLIG C E          +++  FM  G L + L    L      LP    +K  
Sbjct: 60  HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM 119

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A G+ +L   + R  I+RD         A R                 N ML +D  
Sbjct: 120 VDIALGMEYL---SNRNFIHRDL--------AAR-----------------NCMLREDMT 151

Query: 303 AKLSDFGLAKDGPEGD---KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
             ++DFGL+K    GD   +  ++   +    + A E +     TS+SDV++FGV + E+
Sbjct: 152 VCVADFGLSKKIYSGDYYRQGRIAKMPVK---WIAIESLADRVYTSKSDVWAFGVTMWEI 208

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
            T  R          H + ++        R   RL  P            +   L   C 
Sbjct: 209 AT--RGQTPYPGVENHEIYDYL-------RHGNRLKQPE-------DCLDELYDLMYSCW 252

Query: 420 SRDPKARPLMSEVVEALKPL 439
             DPK RP  +++ E L+ +
Sbjct: 253 RADPKDRPTFTKLREVLENI 272

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 87.6 bits (218), Expect = 2e-19
 Identities = 74/305 (24%), Positives = 120/305 (39%), Gaps = 75/305 (24%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLV 193
            +LG+G  G V+K              TG   A+K ++ DG  +  K+ L E+  L    
Sbjct: 7   KVLGQGSSGVVYKV---------RHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE 57

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
              +VK  G   ++ +  +V E+M  GSL + L ++   +P  +   IA    KGL +LH
Sbjct: 58  SPYVVKCYGAFYKEGEISIVLEYMDGGSLAD-LLKKVGKIPEPVLAYIARQILKGLDYLH 116

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK- 312
              +R +I+RD K SN+L++                              K++DFG++K 
Sbjct: 117 --TKRHIIHRDIKPSNLLIN-------------------------SKGEVKIADFGISKV 149

Query: 313 --DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
             +  +   T V     GT  Y +PE +     +  +D++S G+ LLE   G+       
Sbjct: 150 LENTLDQCNTFV-----GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204

Query: 371 PNGEHNLVEWARPHLGERRRFYRLID-------PRL-EGHFSIKGAQKAAQLAAHCLSRD 422
                               F+ L+        P L    FS     +     + CL +D
Sbjct: 205 QPS-----------------FFELMQAICDGPPPSLPAEEFS----PEFRDFISACLQKD 243

Query: 423 PKARP 427
           PK RP
Sbjct: 244 PKKRP 248

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 74/304 (24%), Positives = 117/304 (38%), Gaps = 64/304 (21%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V  G W  +           + VA+K +  +G     +++ E   +  L H 
Sbjct: 12  LGSGQFGVVHLGKWRGK-----------IDVAIKMI-REGAMSEDDFIEEAKVMMKLSHP 59

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           NLV+L G C +     +V E+M  G L N+L  R   L     + +     + + +L   
Sbjct: 60  NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK--- 312
                I+RD    N L+                          +D   K+SDFGLA+   
Sbjct: 120 G---FIHRDLAARNCLVG-------------------------EDNVVKVSDFGLARYVL 151

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
           D    D+   S        +A PE       +S+SDV+SFGV++ E+ +  +   +   N
Sbjct: 152 D----DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN 207

Query: 373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV 432
            E  +VE      G     YRL  P+L          +   +   C    P+ RP   ++
Sbjct: 208 SE--VVE--SVSAG-----YRLYRPKL-------APTEVYTIMYSCWHEKPEDRPAFKKL 251

Query: 433 VEAL 436
           +  L
Sbjct: 252 LSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 74/246 (30%), Positives = 102/246 (41%), Gaps = 38/246 (15%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHL 195
           LG G FG V++G         V+    L VAVKTL      Q   ++L E   +    H 
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVE----LQVAVKTLPESCSEQDESDFLMEALIMSKFNHQ 69

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL---PWSIRMK----IALGAAKG 248
           N+V+LIG   E   R ++ E M  G L++ L R + P    P S+ MK     A   AKG
Sbjct: 70  NIVRLIGVSFERLPRFILLELMAGGDLKSFL-RENRPRPERPSSLTMKDLLFCARDVAKG 128

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
             +L E      I+RD    N LL                              AK++DF
Sbjct: 129 CKYLEENH---FIHRDIAARNCLLTCKGPGRV----------------------AKIADF 163

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           G+A+D           R M    +  PE  + G  TS++DV+SFGV+L E+ +       
Sbjct: 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYP 223

Query: 369 NRPNGE 374
            R N E
Sbjct: 224 GRTNQE 229

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 86.7 bits (215), Expect = 4e-19
 Identities = 74/239 (30%), Positives = 108/239 (45%), Gaps = 62/239 (25%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V++G W   N T PV        AVKTL    +   K++LAE   +  L H 
Sbjct: 14  LGAGQFGEVWEGLW---NNTTPV--------AVKTLKPGTMDP-KDFLAEAQIMKKLRHP 61

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
            L++L   C  ++   +V E M  GSL  +L     R+L LP  I M  A   A G+A+L
Sbjct: 62  KLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDM--AAQVASGMAYL 119

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
                +  I+RD    N+L+        G+   C                 K++DFGLA+
Sbjct: 120 EA---QNYIHRDLAARNVLV--------GENNIC-----------------KVADFGLAR 151

Query: 313 -------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR 363
                  +  EG K  +         + APE  +    + +SDV+SFG++L E++T GR
Sbjct: 152 VIKEDIYEAREGAKFPIK--------WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGR 202

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 86.6 bits (215), Expect = 4e-19
 Identities = 82/309 (26%), Positives = 114/309 (36%), Gaps = 73/309 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQG-HKEWLAEVNFLGDLVH 194
           +G G FG V+           V   TG  +AVK +   D      KE   E+  L  L H
Sbjct: 8   IGGGTFGKVYTA---------VNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH 58

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            NLVK  G  +  ++  +  E+   G+LE  L      L   +     L   +GLA+LH 
Sbjct: 59  PNLVKYYGVEVHREKVYIFMEYCSGGTLEE-LLEHGRILDEHVIRVYTLQLLEGLAYLHS 117

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                +++RD K +NI LD                    N ++      KL DFG A   
Sbjct: 118 HG---IVHRDIKPANIFLD-------------------HNGVI------KLGDFGCAVKL 149

Query: 315 PEGDKTHVSTRV---MGTYGYAAPEYVMTGHLTSR---SDVYSFGVVLLEMLTGRR---S 365
                T +   V    GT  Y APE +  G        +D++S G V+LEM TG+R    
Sbjct: 150 KNN-TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSE 208

Query: 366 MDKNRPNGEHNLVEWA---RPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
           +D           E+        G +      +    EG   +            CL  D
Sbjct: 209 LDN----------EFQIMFHVGAGHKPPIPDSLQLSPEGKDFLD----------RCLESD 248

Query: 423 PKARPLMSE 431
           PK RP  SE
Sbjct: 249 PKKRPTASE 257

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 86.0 bits (214), Expect = 7e-19
 Identities = 67/322 (20%), Positives = 119/322 (36%), Gaps = 89/322 (27%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVN 187
            +     +G+G FG V+    + +G             +K   L++   +  ++ L EV 
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGK---------LYVLKEIDLSNMSEKEREDALNEVK 51

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLL-VYEFMPRGSLENHLFRRSL---PLP----WSIRM 239
            L  L H N++K      E+  +L  V E+   G L   + ++     P P        +
Sbjct: 52  ILKKLNHPNIIKYYE-SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFV 110

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           ++ L     L +LH    R +++RD K  NI L +                   N ++  
Sbjct: 111 QLCLA----LKYLHS---RKILHRDIKPQNIFLTS-------------------NGLV-- 142

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE------YVMTGHLTSRSDVYSFG 353
               KL DFG++K           T V GT  Y +PE      Y        +SD++S G
Sbjct: 143 ----KLGDFGISKV-LSSTVDLAKTVV-GTPYYLSPELCQNKPY------NYKSDIWSLG 190

Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID---PRLEGHFSIKGAQK 410
            VL E+ T +   +         L               +++    P +   +S     +
Sbjct: 191 CVLYELCTLKHPFEGENLLE---L-------------ALKILKGQYPPIPSQYS----SE 230

Query: 411 AAQLAAHCLSRDPKARPLMSEV 432
              L +  L +DP+ RP ++++
Sbjct: 231 LRNLVSSLLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 86.1 bits (213), Expect = 1e-18
 Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 68/325 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAP-------VKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNF 188
           LGEG FG V    +      P       V+ G  L VAVK L  D  +  + ++L EV  
Sbjct: 13  LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKI 72

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL---------------PL 233
           L  L   N+++L+G C+++D   ++ E+M  G L   L    L                L
Sbjct: 73  LSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCL 132

Query: 234 P---WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
           P   +S  + +AL  A G+ +L   +    ++RD  T N L+                  
Sbjct: 133 PAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVG----------------- 172

Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                   ++   K++DFG++++   GD   +  R +    + A E ++ G  T+ SDV+
Sbjct: 173 --------ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVW 224

Query: 351 SFGVVLLEMLTGRRSMDKNRPNGE---HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
           +FGV L E+L     + K +P GE     ++E A     ++ R   L  P          
Sbjct: 225 AFGVTLWEIL----MLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPP-------C 273

Query: 408 AQKAAQLAAHCLSRDPKARPLMSEV 432
            Q   +L   C SRD + RP  S++
Sbjct: 274 PQGLYELMLQCWSRDCRERPSFSDI 298

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 85.6 bits (212), Expect = 1e-18
 Identities = 76/238 (31%), Positives = 107/238 (44%), Gaps = 40/238 (16%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R+ +    LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  
Sbjct: 4   RHLKFIQQLGKGNFGSV-----ELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEI 58

Query: 189 LGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           L  L H N+VK  G C    +R   LV E++P GSL ++L +    L     +  A    
Sbjct: 59  LKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQIC 118

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KG+ +L     +  ++RD  T NIL   V +EN  K G                      
Sbjct: 119 KGMEYL---GSKRYVHRDLATRNIL---VESENRVKIG---------------------- 150

Query: 307 DFGLAKDGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           DFGL K  P+ DK +   R  G    + Y APE +     +  SDV+SFGVVL E+ T
Sbjct: 151 DFGLTKVLPQ-DKEYYKVREPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 83.9 bits (207), Expect = 5e-18
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 37/238 (15%)

Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEWL 183
           L     R   LLG G FG V KG WI E  +  +       VA+KT+ +  G Q  +E  
Sbjct: 4   LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIP------VAIKTIQDRSGRQTFQEIT 57

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
             +  +G L H  +V+L+G C       LV +  P GSL +H+ +    L     +   +
Sbjct: 58  DHMLAMGSLDHAYIVRLLGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCV 116

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L E     +++R+    NILL +                         D   
Sbjct: 117 QIAKGMYYLEEHR---MVHRNLAARNILLKS-------------------------DSIV 148

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +++DFG+A      DK +  +       + A E ++ G  T +SDV+S+GV + EM++
Sbjct: 149 QIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 82.7 bits (204), Expect = 8e-18
 Identities = 87/303 (28%), Positives = 133/303 (43%), Gaps = 58/303 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVH 194
           LLG+G FG VFKG +++             VAVKT   D  Q  K ++L+E   L    H
Sbjct: 2   LLGKGNFGEVFKGTLKDK----------TPVAVKTCKEDLPQELKIKFLSEARILKQYDH 51

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+VKLIG C +     +V E +P G   + L ++   L     +K AL AA G+A+L  
Sbjct: 52  PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE- 110

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD    N L+                     NN+L      K+SDFG+++  
Sbjct: 111 --SKNCIHRDLAARNCLVGE-------------------NNVL------KISDFGMSRQ- 142

Query: 315 PEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
            E D  + S+ +      + APE +  G  +S SDV+S+G++L E      S+      G
Sbjct: 143 -EDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF----SLGVCPYPG 197

Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
             N  + AR  +    + YR+  P+       K      ++   C    P+ RP  SE+ 
Sbjct: 198 MTN--QQAREQV---EKGYRMSCPQ-------KCPDDVYKVMQRCWDYKPENRPKFSELQ 245

Query: 434 EAL 436
           + L
Sbjct: 246 KEL 248

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 83.6 bits (206), Expect = 9e-18
 Identities = 72/238 (30%), Positives = 101/238 (42%), Gaps = 46/238 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E     P +    + VAVKTL        K++  E   L +L H +
Sbjct: 13  LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 68

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-------------LPWSIRMKIAL 243
           +VK  G C+E D  ++V+E+M  G L N   R   P             L  S  + IA 
Sbjct: 69  IVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ 127

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+ +L   A +  ++RD  T N L+                      N+L      
Sbjct: 128 QIAAGMVYL---ASQHFVHRDLATRNCLVG--------------------ENLL-----V 159

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K+ DFG+++D    D   V    M    +  PE +M    T+ SDV+S GVVL E+ T
Sbjct: 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 82.5 bits (204), Expect = 1e-17
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 44/233 (18%)

Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGDLV 193
           ++G+G FGCV+ G  I+ +G         +  AVK+LN    L+  +++L E   + D  
Sbjct: 2   VIGKGHFGCVYHGTLIDSDGQK-------IHCAVKSLNRITDLEEVEQFLKEGIIMKDFS 54

Query: 194 HLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLA 250
           H N++ L+G C+  +   L+V  +M  G L N  F RS     +++  I  G   AKG+ 
Sbjct: 55  HPNVLSLLGICLPSEGSPLVVLPYMKHGDLRN--FIRSETHNPTVKDLIGFGLQVAKGME 112

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +L   A +  ++RD    N +LD                         + +  K++DFGL
Sbjct: 113 YL---ASKKFVHRDLAARNCMLD-------------------------ESFTVKVADFGL 144

Query: 311 AKD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 145 ARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 66/232 (28%), Positives = 89/232 (38%), Gaps = 46/232 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLV 193
           LG+GGFG V          A     TG   A K L+   L   +G +  L E   L + V
Sbjct: 1   LGKGGFGEVC---------ACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL-EKV 50

Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAF 251
               +  + Y  E    L LV   M  G L+ H++    P  P +  +  A     GL  
Sbjct: 51  SSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH 110

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH+   R ++YRD K  N+LLD                            N ++SD GLA
Sbjct: 111 LHQ---RRIVYRDLKPENVLLD-------------------------DHGNVRISDLGLA 142

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
            +   G K        GT GY APE +         D ++ G  L EM+ GR
Sbjct: 143 VELKGGKKIKGRA---GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 45/242 (18%)

Query: 137 LGEGGFG----CVFKGWIEENG-TAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLG 190
           LGEG FG    C  +G  E  G  AP   G  + VAVK L  D  +    ++L E+  + 
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMS 72

Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI--------- 241
            L + N+++L+G C+ DD   ++ E+M  G L   L +R +   ++    I         
Sbjct: 73  RLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLL 132

Query: 242 --ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             A+  A G+ +L   A    ++RD  T N L+                           
Sbjct: 133 YMAVQIASGMKYL---ASLNFVHRDLATRNCLVG-------------------------N 164

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
            Y  K++DFG++++   GD   +  R +    + A E ++ G  T+ SDV++FGV L EM
Sbjct: 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEM 224

Query: 360 LT 361
            T
Sbjct: 225 FT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 82.6 bits (205), Expect = 2e-17
 Identities = 61/258 (23%), Positives = 95/258 (36%), Gaps = 64/258 (24%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEV 186
           +F+   ++GEG F  V             +  T    A+K L+   L   +  K    E 
Sbjct: 2   DFKFGKIIGEGSFSTVVLAK---------EKETNKEYAIKILDKRQLIKEKKVKYVKIEK 52

Query: 187 NFLGDL-VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-FRRSLPLPWSIRMKIAL 243
             L  L  H  ++KL  Y  +D++ L  V E+ P G L  ++    SL      R   A 
Sbjct: 53  EVLTRLNGHPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKC-TRFYAAE 110

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                L +LH    + +I+RD K  NILLD                         +D + 
Sbjct: 111 -ILLALEYLHS---KGIIHRDLKPENILLD-------------------------KDMHI 141

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVM------------------GTYGYAAPEYVMTGHLTS 345
           K++DFG AK          +                      GT  Y +PE +       
Sbjct: 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGK 201

Query: 346 RSDVYSFGVVLLEMLTGR 363
            SD+++ G ++ +MLTG+
Sbjct: 202 SSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 48/233 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN----HDGLQGHKEWLAEVNFLGDL 192
           +GEG  G VFK    E         TG TVA+K +       G+    + L E+  L   
Sbjct: 8   IGEGAHGIVFKAKDRE---------TGETVALKKVALRRLEGGIP--NQALREIKALQAC 56

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H  +VKL+         +LV E+MP   L   L     PLP +          KG+A++
Sbjct: 57  QHPYVVKLLDVFPHGSGFVLVMEYMPS-DLSEVLRDEERPLPEAQVKSYMRMLLKGVAYM 115

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      +++RD K +N+L+ A                         D   K++DFGLA+
Sbjct: 116 HANG---IMHRDLKPANLLISA-------------------------DGVLKIADFGLAR 147

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
              E +    S +V  T  Y APE ++ G        D+++ G +  E+L G 
Sbjct: 148 LFSEEEPRLYSHQV-ATRWYRAPE-LLYGARKYDPGVDLWAVGCIFAELLNGS 198

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 79/300 (26%), Positives = 114/300 (38%), Gaps = 55/300 (18%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
           S LGEG  G V K  +           TG+  A+KT+  D      K+ L E+       
Sbjct: 7   SRLGEGAGGSVTKCRL---------KNTGMIFALKTITTDPNPDLQKQILRELEINKSCK 57

Query: 194 HLNLVKLIGYCIEDDQRLL--VYEFMPRGSLEN---HLFRRSLPLPWSIRMKIALGAAKG 248
              +VK  G  +++    +    E+   GSL++    + +R   +   +  KIA    KG
Sbjct: 58  SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKG 117

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L++LH    R +I+RD K SNILL                          +    KL DF
Sbjct: 118 LSYLHS---RKIIHRDIKPSNILLT-------------------------RKGQVKLCDF 149

Query: 309 GLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           G++ +       T       GT  Y APE +     +  SDV+S G+ LLE+   R    
Sbjct: 150 GVSGELVNSLAGTFT-----GTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFP 204

Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
              P GE  L                L D   E    IK +++       CL +DP  RP
Sbjct: 205 ---PEGEPPLGPIELLSYIVNMPNPELKD---EPGNGIKWSEEFKDFIKQCLEKDPTRRP 258

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 81.4 bits (202), Expect = 4e-17
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 47/238 (19%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEV 186
           +     LGEG +G V+K   ++ G           VA+K +      +G+      L E+
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGE---------IVALKKIRLDNEEEGIP--STALREI 49

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           + L +L H N+VKL+     + +  LV+E+     L+ +L +R  PL  ++   I     
Sbjct: 50  SLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLL 108

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GLA+ H      +++RD K  NIL++                          D   KL+
Sbjct: 109 RGLAYCH---SHRILHRDLKPQNILINR-------------------------DGVLKLA 140

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+      +T+ +  V+ T  Y APE ++     S + D++S G +  EM+TG+
Sbjct: 141 DFGLARAFGIPLRTY-THEVV-TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 80.0 bits (197), Expect = 7e-17
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 51/235 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG FG V +G             TG  VAVK +  D     + +L E   +  L H N
Sbjct: 14  IGEGEFGAVLQG-----------EYTGQKVAVKNIKCDVTA--QAFLEETAVMTKLHHKN 60

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM-KIALGAAKGLAFLHEE 255
           LV+L+G  I  +   +V E M +G+L N L  R   L   I++ + +L  A+G+ +L   
Sbjct: 61  LVRLLG-VILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES- 118

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             + +++RD    NIL+                          +D  AK+SDFGLA+ G 
Sbjct: 119 --KKLVHRDLAARNILVS-------------------------EDGVAKVSDFGLARVGS 151

Query: 316 EG-DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
            G D + +  +      + APE +     +S+SDV+S+GV+L E+ + GR    K
Sbjct: 152 MGVDNSKLPVK------WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPK 200

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 80.3 bits (199), Expect = 8e-17
 Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 46/229 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--EVNFLGDLVH 194
           +GEG  G V+K              TG  VA+K +    L+   + L   E+  + D  H
Sbjct: 27  IGEGASGEVYKA---------TDRATGKEVAIKKMR---LRKQNKELIINEILIMKDCKH 74

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+V      +  D+  +V E+M  GSL + + +  + +       +     +GL +LH 
Sbjct: 75  PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH- 133

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              + VI+RD K+ NILL                          +D + KL+DFG A   
Sbjct: 134 --SQNVIHRDIKSDNILLS-------------------------KDGSVKLADFGFAAQL 166

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTG 362
            +      S  V+GT  + APE V+       + D++S G++ +EM  G
Sbjct: 167 TKEKSKRNS--VVGTPYWMAPE-VIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 67/240 (27%), Positives = 95/240 (39%), Gaps = 48/240 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E +   P +      VAVK L        +++  E   L  L H +
Sbjct: 13  LGEGAFGKVFLA--ECHNLLPEQDKM--LVAVKALKEASESARQDFQREAELLTVLQHQH 68

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRMKI 241
           +V+  G C E    L+V+E+M  G L N   R   P               L     + I
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAI 127

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
           A   A G+ +L   A    ++RD  T N L+                          Q  
Sbjct: 128 ASQIASGMVYL---ASLHFVHRDLATRNCLVG-------------------------QGL 159

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             K+ DFG+++D    D   V  R M    +  PE ++    T+ SD++SFGVVL E+ T
Sbjct: 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 79.1 bits (195), Expect = 2e-16
 Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 62/311 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--------NHDGLQGH--KEWLAE 185
           L+G+G +G V+   +  N T      TG  +AVK +         HD  Q    K   +E
Sbjct: 8   LIGKGTYGRVY---LALNVT------TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSE 58

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           +  L DL HLN+V+ +G+   ++   +  E++P GS+ +   R        +        
Sbjct: 59  IETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGS-CLRTYGRFEEQLVRFFTEQV 117

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            +GLA+LH +    +++RD K  N+L+DA         G C                 K+
Sbjct: 118 LEGLAYLHSKG---ILHRDLKADNLLVDAD--------GIC-----------------KI 149

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTGR 363
           SDFG++K   +      +  + G+  + APE + +     +++ D++S G V+LEM  GR
Sbjct: 150 SDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
                 RP  +   +  A   LG +R       P +    S+  +  A      C + +P
Sbjct: 210 ------RPWSDEEAIA-AMFKLGNKRS-----APPIPPDVSMNLSPVALDFLNACFTINP 257

Query: 424 KARPLMSEVVE 434
             RP   E+++
Sbjct: 258 DNRPTARELLQ 268

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 46/243 (18%)

Query: 137 LGEGGFGCV-------FKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNF 188
           LGEG FG V        + + E+           + VAVK L  D      +++L EV  
Sbjct: 13  LGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKI 72

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR----------SLPLPWSIR 238
           L  L   N+ +L+G C  D    ++ E+M  G L   L +           S  L +S  
Sbjct: 73  LSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTL 132

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           + +A   A G+ +L        ++RD  T N L+                          
Sbjct: 133 LYMATQIASGMRYL---ESLNFVHRDLATRNCLVGK------------------------ 165

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            +Y  K++DFG++++    D   V  R      + A E V+ G  T++SDV++FGV L E
Sbjct: 166 -NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWE 224

Query: 359 MLT 361
           +LT
Sbjct: 225 ILT 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 78.0 bits (192), Expect = 4e-16
 Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 58/235 (24%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G +G V++G W + +          LTVAVKTL  D ++   E+L E   + ++ H 
Sbjct: 14  LGGGQYGEVYEGVWKKYS----------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHP 62

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALGAAKGLAFLH 253
           NLV+L+G C  +    ++ EFM  G+L ++L    R   +   + + +A   +  + +L 
Sbjct: 63  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE 121

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK- 312
           +   +  I+RD    N L+                     N+++      K++DFGL++ 
Sbjct: 122 K---KNFIHRDLAARNCLVGE-------------------NHLV------KVADFGLSRL 153

Query: 313 ------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
                     G K  +         + APE +     + +SDV++FGV+L E+ T
Sbjct: 154 MTGDTYTAHAGAKFPIK--------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 77.5 bits (191), Expect = 5e-16
 Identities = 71/241 (29%), Positives = 110/241 (45%), Gaps = 50/241 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLA--- 184
           N+R   LLG+G FG V+               TG  +AVK +  D       KE  A   
Sbjct: 3   NWRRGKLLGQGAFGRVY---------LCYDVDTGRELAVKQVPFDPDSPETKKEVNALEC 53

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
           E+  L +L H  +V+  G C+ DD+ L ++ E+MP GS+++ L +    L  ++  K   
Sbjct: 54  EIQLLKNLQHERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQL-KAYGALTETVTRKYTR 111

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              +G+ +LH      +++RD K +NIL D+               G           N 
Sbjct: 112 QILEGVEYLHSNM---IVHRDIKGANILRDS--------------AG-----------NV 143

Query: 304 KLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-SDVYSFGVVLLEML 360
           KL DFG +K         T + + V GT  + +PE V++G    R +DV+S G  ++EML
Sbjct: 144 KLGDFGASKRLQTICSSGTGMKS-VTGTPYWMSPE-VISGEGYGRKADVWSVGCTVVEML 201

Query: 361 T 361
           T
Sbjct: 202 T 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 46/237 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G  +  G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 14  LGQGSFGMVYEGIAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 69

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P      +++A  
Sbjct: 70  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVQAPPSLKKMIQMAGE 127

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 128 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 159

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T
Sbjct: 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 216

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 75/324 (23%), Positives = 111/324 (34%), Gaps = 76/324 (23%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDL 192
            ++GEG +G V K   +          TG  VA+K    + D     K  L EV  L  L
Sbjct: 7   GVVGEGAYGVVLKCRNKA---------TGEIVAIKKFKESEDDEDVKKTALREVKVLRQL 57

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-HLFRRSLPLPWSIRMKIALGAAKGLAF 251
            H N+V L        +  LV+E++ R  LE        LP P ++R        + +A+
Sbjct: 58  RHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLP-PDAVR-SYIWQLLQAIAY 115

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H      +I+RD K  NIL+                          +    KL DFG A
Sbjct: 116 CHSHN---IIHRDIKPENILVS-------------------------ESGVLKLCDFGFA 147

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPE----YVMTGHLTSRSDVYSFGVVLLEMLTGR---- 363
           +       + ++  V  T  Y APE        G      DV++ G ++ E+L G     
Sbjct: 148 RALRARPASPLTDYV-ATRWYRAPELLVGDTNYG---KPVDVWAIGCIMAELLDGEPLFP 203

Query: 364 ------------RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPR----LEGHFSIKG 407
                       + +    P   H  +  + P            +P     LE  +  K 
Sbjct: 204 GDSDIDQLYLIQKCLGPLPP--SHQELFSSNPRF----AGVAFPEPSQPESLERRYPGKV 257

Query: 408 AQKAAQLAAHCLSRDPKARPLMSE 431
           +  A      CL  DPK R    E
Sbjct: 258 SSPALDFLKACLRMDPKERLTCDE 281

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 65/237 (27%), Positives = 99/237 (41%), Gaps = 57/237 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           +GEG +G V+K   +          TG  VA+K +    L+   E      L E+  L +
Sbjct: 7   IGEGTYGVVYKARDKL---------TGEIVAIKKIK---LRFESEGIPKTALREIKLLKE 54

Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
           L H N++KL+         L LV+EFM    L   +  R   LP S+         +GLA
Sbjct: 55  LNHPNIIKLLD-VFRHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLA 112

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           F H      +++RD K  N+L++                          +   KL+DFGL
Sbjct: 113 FCHSHG---ILHRDLKPENLLIN-------------------------TEGVLKLADFGL 144

Query: 311 AK--DGPEGDKTH-VSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR 363
           A+    P    TH V TR      Y APE ++     ++  D++S G +  E+L+ R
Sbjct: 145 ARSFGSPVRPYTHYVVTR-----WYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 76.9 bits (189), Expect = 1e-15
 Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 46/243 (18%)

Query: 137 LGEGGFG----CVFKG---WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNF 188
           LGEG FG    C  +G   +++++ +  V     + VAVK L  D  +  + ++L E+  
Sbjct: 13  LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKI 72

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLP----------WSIR 238
           +  L   N+++L+  CI  D   ++ E+M  G L   L R                +S  
Sbjct: 73  MSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTL 132

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           + +A   A G+ +L   +    ++RD  T N L+        GK                
Sbjct: 133 IFMATQIASGMKYL---SSLNFVHRDLATRNCLV--------GK---------------- 165

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            +Y  K++DFG++++   GD   +  R +    + + E ++ G  T+ SDV++FGV L E
Sbjct: 166 -NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWE 224

Query: 359 MLT 361
           +LT
Sbjct: 225 ILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 76.5 bits (188), Expect = 2e-15
 Identities = 74/230 (32%), Positives = 103/230 (44%), Gaps = 39/230 (16%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDLVHL 195
           LGEG FG V     E     P    TG  VAVK+L  +    H   L  E+  L +L H 
Sbjct: 12  LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 66

Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           N+VK  G C ED      L+ EF+P GSL+ +L R    +    ++K A+   KG+ +L 
Sbjct: 67  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL- 125

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               R  ++RD    N+L   V +E+  K G                      DFGL K 
Sbjct: 126 --GSRQYVHRDLAARNVL---VESEHQVKIG----------------------DFGLTK- 157

Query: 314 GPEGDKTHVSTR--VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             E DK + + +  +     + APE ++       SDV+SFGV L E+LT
Sbjct: 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 75.8 bits (186), Expect = 2e-15
 Identities = 76/318 (23%), Positives = 129/318 (40%), Gaps = 72/318 (22%)

Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           L  +  +    +G+G FG V  G              G  VAVK + +D     + +LAE
Sbjct: 3   LNMKELKLLQTIGKGEFGDVMLGDYR-----------GNKVAVKCIKNDATA--QAFLAE 49

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
            + +  L H NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L
Sbjct: 50  ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 109

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              + + +L        ++RD    N+L+                          +D  A
Sbjct: 110 DVCEAMEYLEANN---FVHRDLAARNVLVS-------------------------EDNVA 141

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           K+SDFGL K   E   T  + ++     + APE +     +++SDV+SFG++L E+ +  
Sbjct: 142 KVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA----QLAAHCL 419
           R             V + R  L +       + PR+E  + +            +   C 
Sbjct: 197 R-------------VPYPRIPLKD-------VVPRVEKGYKMDAPDGCPPVVYDVMKQCW 236

Query: 420 SRDPKARPLMSEVVEALK 437
             D   RP   ++ E L+
Sbjct: 237 HLDAATRPSFLQLREQLE 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 75.0 bits (184), Expect = 4e-15
 Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 41/236 (17%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           + ++G G FG VF+G ++  G   V       VA+KTL     +  + ++L+E + +G  
Sbjct: 10  QKVIGAGEFGEVFRGILKMPGRKEV------AVAIKTLKPGYTEKQRQDFLSEASIMGQF 63

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+++L G   +    +++ E+M  G+L+ +L            + +  G A G+ +L
Sbjct: 64  SHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              ++   ++RD    NIL+                     N+ L      K+SDFGL++
Sbjct: 124 ---SDMNYVHRDLAARNILV---------------------NSNL----ECKVSDFGLSR 155

Query: 313 ---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
              D PEG  T    ++     + APE +     TS SDV+SFG+V+ E+++ G R
Sbjct: 156 VLEDDPEGTYTTSGGKI--PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGER 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 75.4 bits (185), Expect = 5e-15
 Identities = 70/257 (27%), Positives = 107/257 (41%), Gaps = 58/257 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT-VAVKTLNHDGLQGH-KEWLAEVN 187
           N      LGEG FG V K          +K   G T VAVK L  +      ++ L+E N
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFR-----LKGRAGYTTVAVKMLKENASSSELRDLLSEFN 55

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---------------FRRSLP 232
            L  + H +++KL G C +D   LL+ E+   GSL + L                R S  
Sbjct: 56  LLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSY 115

Query: 233 L------PWSIRMKI--ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
           L        ++   I  A   ++G+ +L   AE  +++RD    N+L+   R        
Sbjct: 116 LDNPDERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRK------- 165

Query: 285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT 344
                              K+SDFGL++D  E D     ++      + A E +     T
Sbjct: 166 ------------------MKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT 207

Query: 345 SRSDVYSFGVVLLEMLT 361
           ++SDV+SFGV+L E++T
Sbjct: 208 TQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 74.7 bits (184), Expect = 5e-15
 Identities = 73/281 (25%), Positives = 111/281 (39%), Gaps = 56/281 (19%)

Query: 165 TVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
            VA+K ++ +  Q    E   EV  +    H N+VK     +  D+  LV  ++  GSL 
Sbjct: 28  KVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLL 87

Query: 224 NHLFRRSLP---LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY 280
             + + S P   L  +I   +     KGL +LH   +   I+RD K  NILL        
Sbjct: 88  -DIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ---IHRDIKAGNILLG------- 136

Query: 281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                             +D + K++DFG    LA  G       V    +GT  + APE
Sbjct: 137 ------------------EDGSVKIADFGVSASLADGG--DRTRKVRKTFVGTPCWMAPE 176

Query: 337 YVMTGH--LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRL 394
            VM        ++D++SFG+  +E+ TG     K  P     L     P           
Sbjct: 177 -VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDP----------- 224

Query: 395 IDPRLEGHFSIKGAQKA-AQLAAHCLSRDPKARPLMSEVVE 434
             P LE     K   K+  ++ + CL +DP  RP   E+++
Sbjct: 225 --PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 75.1 bits (184), Expect = 7e-15
 Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 37/228 (16%)

Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
           +LG G FG V+KG W+ E  T  +       VA+K LN   G + + E++ E   +  + 
Sbjct: 14  VLGSGAFGTVYKGIWVPEGETVKIP------VAIKILNETTGPKANVEFMDEALIMASMD 67

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H +LV+L+G C+    +L V + MP G L +++      +   + +   +  AKG+ +L 
Sbjct: 68  HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 126

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
           E   R +++RD    N+L   V++ N+                       K++DFGLA+ 
Sbjct: 127 E---RRLVHRDLAARNVL---VKSPNH----------------------VKITDFGLARL 158

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               +K + +        + A E +     T +SDV+S+GV + E++T
Sbjct: 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 74.6 bits (183), Expect = 7e-15
 Identities = 82/314 (26%), Positives = 131/314 (41%), Gaps = 64/314 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 14  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 69

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------PLPWSIRMKIALGA 245
           ++V+L+G   +    L+V E M  G L+++L  RSL          P P +++  I + A
Sbjct: 70  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPP-TLQEMIQMAA 126

Query: 246 --AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+A+L+    +  ++RD         A R                 N M+  D+  
Sbjct: 127 EIADGMAYLNA---KKFVHRDL--------AAR-----------------NCMVAHDFTV 158

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           K+ DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +  
Sbjct: 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-- 216

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
                        L E     L   +    ++D            ++   L   C   +P
Sbjct: 217 -------------LAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNP 262

Query: 424 KARPLMSEVVEALK 437
           K RP   E+V  LK
Sbjct: 263 KMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 73.6 bits (181), Expect = 1e-14
 Identities = 70/309 (22%), Positives = 117/309 (37%), Gaps = 65/309 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +F+    LG+G +G V+K     +             A+K ++  G    KE    VN +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQ---------FYALKEVDL-GSMSQKEREDAVNEI 50

Query: 190 GDLVHLNLVKLIGY--CIEDDQRL-LVYEFMPRGSLENHLFRRSL---PLPWSIRMKIAL 243
             L  +N   +I Y     D  +L +V E+ P G L   + +R      +P     +I +
Sbjct: 51  RILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              +GL  LHE   + +++RD K++NI                         +L  +   
Sbjct: 111 QLLRGLQALHE---QKILHRDLKSANI-------------------------LLVANDLV 142

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           K+ D G++K      K +++   +GT  Y APE       + +SD++S G +L EM T  
Sbjct: 143 KIGDLGISKVL----KKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA 198

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
              +             AR     R +  R   P +   +S    Q         L   P
Sbjct: 199 PPFE-------------ARSMQDLRYKVQRGKYPPIPPIYS----QDLQNFIRSMLQVKP 241

Query: 424 KARPLMSEV 432
           K RP   ++
Sbjct: 242 KLRPNCDKI 250

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 41/233 (17%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           F     LGEG +G V+K   +E G           VA+K +  +     +E + E++ L 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQ---------VVAIKVVPVEE--DLQEIIKEISILK 53

Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
                 +VK  G   ++    +V E+   GS+ + +   +  L       I     KGL 
Sbjct: 54  QCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLE 113

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH       I+RD K  NILL+                         ++  AKL+DFG+
Sbjct: 114 YLHS---NKKIHRDIKAGNILLN-------------------------EEGQAKLADFGV 145

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           +  G   D       V+GT  + APE +      +++D++S G+  +EM  G+
Sbjct: 146 S--GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 71/252 (28%), Positives = 101/252 (40%), Gaps = 67/252 (26%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-- 193
            LGEG FG V K   E  G     P    TVAVK L  D  +  K+       L DLV  
Sbjct: 19  PLGEGAFGQVVKA--EAVGL--DNPNETSTVAVKMLKDDATE--KD-------LSDLVSE 65

Query: 194 ---------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-------SLPLPWSI 237
                    H N++ L+G C ++    +V E+   G+L + L  R       S   P   
Sbjct: 66  MEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPP 125

Query: 238 RMKI--------ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
              +        A   A+G+ FL   A +  I+RD    N+L+                 
Sbjct: 126 EETLTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVT---------------- 166

Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
                    +D+  K++DFGLA+D    D    +T       + APE +     T +SDV
Sbjct: 167 ---------EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217

Query: 350 YSFGVVLLEMLT 361
           +SFGV+L E+ T
Sbjct: 218 WSFGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 60/245 (24%), Positives = 94/245 (38%), Gaps = 46/245 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN---HDGLQGHKEWLAEV 186
           +F    ++G+G FG V    +++  T           A+K +N          +  L E 
Sbjct: 1   HFELLRVIGKGAFGKVCI--VQKRDT-------KKMFAMKYMNKQKCVEKGSVRNVLNER 51

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
             L +L H  LV L  Y  +D++ + LV + +  G L  HL ++       ++  I    
Sbjct: 52  RILQELNHPFLVNLW-YSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWIC-EI 109

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              L +LH    + +I+RD K  NILLD                         Q +   +
Sbjct: 110 VLALEYLHS---KGIIHRDIKPDNILLDE------------------------QGH-VHI 141

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DF +A        T   T   GT GY APE +     +   D +S GV   E L G+R 
Sbjct: 142 TDFNIATKVTPDTLT---TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRP 198

Query: 366 MDKNR 370
              + 
Sbjct: 199 YRGHS 203

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 84/298 (28%), Positives = 129/298 (43%), Gaps = 70/298 (23%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V+ G W   NG           VAVKTL   G    + +L E   +  L H 
Sbjct: 14  LGNGQFGEVWMGTW---NGNT--------KVAVKTLK-PGTMSPESFLEEAQIMKKLRHD 61

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
            LV+L    + ++   +V E+M +GSL + L     R+L LP  + M  A   A G+A++
Sbjct: 62  KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDM--AAQVAAGMAYI 118

Query: 253 HEEAER-PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
               ER   I+RD +++NIL+                     + ++      K++DFGLA
Sbjct: 119 ----ERMNYIHRDLRSANILVG--------------------DGLV-----CKIADFGLA 149

Query: 312 KDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           +   + + T    R    +   + APE  + G  T +SDV+SFG++L E++T  R     
Sbjct: 150 RLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             N         R  L +  R YR+  P+              +L   C  +DP+ RP
Sbjct: 207 MNN---------REVLEQVERGYRMPCPQ-------DCPISLHELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 73.0 bits (179), Expect = 2e-14
 Identities = 81/318 (25%), Positives = 124/318 (38%), Gaps = 87/318 (27%)

Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
             LKL  +       LG G FG V+ G+   +            VA+K+L   G    + 
Sbjct: 6   ETLKLVKK-------LGAGQFGEVWMGYYNGH----------TKVAIKSLK-QGSMSPEA 47

Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIR 238
           +LAE N +  L H  LV+L    +  +   ++ E+M  GSL + L       L +   I 
Sbjct: 48  FLAEANLMKQLQHPRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLID 106

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           M  A   A+G+AF+     +  I+RD + +NIL+                          
Sbjct: 107 M--AAQIAEGMAFIER---KNYIHRDLRAANILVS------------------------- 136

Query: 299 QDYNAKLSDFGLAK-------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
           +    K++DFGLA+          EG K  +         + APE +  G  T +SDV+S
Sbjct: 137 ETLCCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGTFTIKSDVWS 188

Query: 352 FGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ 409
           FG++L E++T  R       N E   NL            R YR+  P           +
Sbjct: 189 FGILLTEIVTYGRIPYPGMTNPEVIQNL-----------ERGYRMPRPD-------NCPE 230

Query: 410 KAAQLAAHCLSRDPKARP 427
           +  +L   C    P+ RP
Sbjct: 231 ELYELMRLCWKEKPEERP 248

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 73.0 bits (179), Expect = 3e-14
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 42/214 (19%)

Query: 161 GTGLTVAVKTL----NHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY 214
            TG  +AVK +    N    Q    +    E+  +  L H ++++++G   ED    L  
Sbjct: 23  KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV 82

Query: 215 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
           E+M  GS+ +HL  +      ++ +       +GL++LH   E  +I+RD K +N+L+D+
Sbjct: 83  EWMAGGSV-SHLLSKYGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDS 138

Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTY 330
                                        +++DFG    LA  G    +     +++GT 
Sbjct: 139 T------------------------GQRLRIADFGAAARLAAKGTGAGE--FQGQLLGTI 172

Query: 331 GYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
            + APE V+ G    RS DV+S G V++EM T +
Sbjct: 173 AFMAPE-VLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 72.2 bits (177), Expect = 3e-14
 Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 56/311 (18%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDL 192
           E ++G G FG V +G ++  G   +       VA+KTL      +  +++L+E + +G  
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREI------FVAIKTLKSGYTEKQRRDFLSEASIMGQF 62

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N++ L G   +    +++ EFM  G+L++ L +          + +  G A G+ +L
Sbjct: 63  DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 122

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              +E   ++RD    NIL+++                    N++      K+SDFGL++
Sbjct: 123 ---SEMNYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 154

Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
              +       T  +G      + APE +     TS SDV+S+G+V+ E+++ G R    
Sbjct: 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 214

Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
                  N +E          + YRL  P       +       QL   C  +D  ARP 
Sbjct: 215 MSNQDVINAIE----------QDYRLPPP-------MDCPTALHQLMLDCWQKDRNARPK 257

Query: 429 MSEVVEALKPL 439
             ++V  L  +
Sbjct: 258 FGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 37/226 (16%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
            +GEG FG V++G               + VAVKT  +      +E +L E   +    H
Sbjct: 13  CIGEGQFGDVYQG------VYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH 66

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            ++VKLIG    ++   +V E  P G L ++L      L  +  +  +   +  LA+L  
Sbjct: 67  PHIVKLIGVI-TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES 125

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  ++RD    N+L+ +           C+                KL DFGL++  
Sbjct: 126 ---KRFVHRDIAARNVLVSSPD---------CV----------------KLGDFGLSR-Y 156

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            E +  + +++      + APE +     TS SDV+ FGV + E+L
Sbjct: 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 72.0 bits (176), Expect = 7e-14
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 21/229 (9%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 23  LGEGCFGQVVMA--EALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 80

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N++ L+G C +D    ++ E+  +G+L  +L  RR   + +S               + 
Sbjct: 81  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-------------IA 127

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
              +  + ++D  +    +   R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 128 RVPDEQMTFKDLVSCTYQV--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 185

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 186 DVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 72.0 bits (177), Expect = 8e-14
 Identities = 71/243 (29%), Positives = 97/243 (39%), Gaps = 66/243 (27%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD---------GLQGHKEWLAEV 186
           +LG+G FG V          A +K GT    AVK L  D              K  LA  
Sbjct: 2   VLGKGSFGKVL--------LAELK-GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALA 52

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSI--RMKIA 242
                L  L+       C +   RL  V E++  G L  H+ R      P +     +I 
Sbjct: 53  GKHPFLTQLHS------CFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIV 106

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           LG    L FLHE   R +IYRD K  N+LLD+         G                  
Sbjct: 107 LG----LQFLHE---RGIIYRDLKLDNVLLDSE--------GHI---------------- 135

Query: 303 AKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEML 360
            K++DFG+ K+G   G  T   +   GT  Y APE +++      + D ++ GV+L EML
Sbjct: 136 -KIADFGMCKEGILGGVTT---STFCGTPDYIAPE-ILSYQPYGPAVDWWALGVLLYEML 190

Query: 361 TGR 363
            G+
Sbjct: 191 AGQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 71.7 bits (176), Expect = 9e-14
 Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 41/231 (17%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    + VAVK L        +E L +E+  +  L  H
Sbjct: 43  LGAGAFGKV----VEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH 98

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLH 253
            N+V L+G C      L++ E+   G L N L R R   L     +  +   AKG+AFL 
Sbjct: 99  ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL- 157

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
             A +  I+RD    N+LL       +GK                     K+ DFGLA+D
Sbjct: 158 --ASKNCIHRDLAARNVLL------THGKI-------------------VKICDFGLARD 190

Query: 314 GPEGDKTHV---STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               D  +V   + R+     + APE +     T  SDV+S+G++L E+ +
Sbjct: 191 -IMNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 71.0 bits (175), Expect = 1e-13
 Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 60/240 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           +GEG +G V+K     N        TG  VA+K +    ++  KE      + E+  L  
Sbjct: 7   IGEGTYGQVYKA---RNKK------TGELVALKKIR---MENEKEGFPITAIREIKLLQK 54

Query: 192 LVHLNLVKLIGYCIEDDQR--LLVYEFMP---RGSLENHLFRRSLPLPWSIR--MKIALG 244
           L H N+V+L        +    +V+E+M     G L++   + +      I+  MK  L 
Sbjct: 55  LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTES---QIKCYMKQLL- 110

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GL +LH      +++RD K SNIL++                          D   K
Sbjct: 111 --EGLQYLHS---NGILHRDIKGSNILIN-------------------------NDGVLK 140

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+       +   T  + T  Y  PE ++         D++S G +L E+  G+
Sbjct: 141 LADFGLARP-YTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 73/309 (23%), Positives = 115/309 (37%), Gaps = 80/309 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVK-PGTGLTVAVKTLNHDGLQGH-KEWL-AEVNFLGDLV 193
           +G+G FG V K          V+    G  +  K +++  +    K+ L +EVN L +L 
Sbjct: 8   IGKGSFGTVRK----------VRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK 57

Query: 194 HLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLFRRS----LPLP----WSIRMKIAL 243
           H N+V+     I+   + L  V E+   G L   L ++       +     W I  ++ L
Sbjct: 58  HPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQ-LIQKCKKERKYIEEEFIWRILTQLLL 116

Query: 244 GAAKGLAFLH--EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                L   H   +    V++RD K +NI LDA                         + 
Sbjct: 117 A----LYECHNRSDPGNTVLHRDLKPANIFLDA-------------------------NN 147

Query: 302 NAKLSDFGLAKDGPEGD---KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           N KL DFGLAK         KT+V     GT  Y +PE +       +SD++S G ++ E
Sbjct: 148 NVKLGDFGLAKILGHDSSFAKTYV-----GTPYYMSPEQLNHMSYDEKSDIWSLGCLIYE 202

Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           +           P         AR  L    +       R+   +S     +  ++    
Sbjct: 203 LCAL-------SPPFT------ARNQLQLASKIKEGKFRRIPYRYS----SELNEVIKSM 245

Query: 419 LSRDPKARP 427
           L+ DP  RP
Sbjct: 246 LNVDPDKRP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 70/247 (28%), Positives = 100/247 (40%), Gaps = 66/247 (26%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVK-PGTGLTVAVKTLNHDGLQGHKE---WLA 184
            +F     LG G FG V            V+  G+G   A+K L+   +   K+    L 
Sbjct: 1   DDFEFIKTLGTGSFGRVML----------VRHKGSGKYYALKILSKAKIVKLKQVEHVLN 50

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRM--- 239
           E   L  + H  LV L G   +DD  L LV E++P G L +HL +    P P + R    
Sbjct: 51  EKRILQSIRHPFLVNLYG-SFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVA-RFYAA 108

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           ++ L     L +LH      ++YRD K  N+LLD                          
Sbjct: 109 QVVLA----LEYLHS---LDIVYRDLKPENLLLD-------------------------S 136

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVM---GTYGYAAPEYVM-TGHLTSRSDVYSFGVV 355
           D   K++DFG AK         V  R     GT  Y APE ++  G+     D ++ G++
Sbjct: 137 DGYIKITDFGFAK--------RVKGRTYTLCGTPEYLAPEIILSKGY-GKAVDWWALGIL 187

Query: 356 LLEMLTG 362
           + EML G
Sbjct: 188 IYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 53/243 (21%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK-----TLNHDGLQGHKEWLA----E 185
           +L+G G FG V+ G         +   +G  +AVK     +++       +  L     E
Sbjct: 6   ALIGSGSFGSVYLG---------MNASSGELMAVKQVELPSVSASSKDRKRSMLDALARE 56

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           +  L +L H N+V+ +G  ++ D   +  E++P GS+   L         ++        
Sbjct: 57  IALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAA-LLNNYGAFEETLVRNFVRQI 115

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KGL +LH    R +I+RD K +NIL+D     N G                      K+
Sbjct: 116 LKGLNYLHN---RGIIHRDIKGANILVD-----NKGGI--------------------KI 147

Query: 306 SDFGLAKDGPEGDKTHVSTR-----VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           SDFG++K   E +     T      + G+  + APE V     T ++D++S G +++EML
Sbjct: 148 SDFGISKK-LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML 206

Query: 361 TGR 363
           TG+
Sbjct: 207 TGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 21/229 (9%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 26  LGEGCFGQVVMA--EAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 83

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ + + 
Sbjct: 84  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYCYN 128

Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
             + P     FK   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 129 PTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 188

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 189 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 72.2 bits (177), Expect = 3e-13
 Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 53/282 (18%)

Query: 162 TGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLI--GYCIEDDQRLLVYEF 216
           TG  VA+K L  D  +   +   +  E      L H N+V L+  G          V+E+
Sbjct: 2   TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFEY 60

Query: 217 MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
           +P  +L   L      LP     ++ L     LA  H    + +++RD K  NI++    
Sbjct: 61  VPGRTLREVLAADG-ALPAGETGRLMLQVLDALACAHN---QGIVHRDLKPQNIMVSQTG 116

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP---EGDKTHVS--TRVMGTYG 331
                                    +AK+ DFG+    P   + D   ++  T V+GT  
Sbjct: 117 VRP----------------------HAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPT 154

Query: 332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF 391
           Y APE +    +T  SD+Y++G++ LE LTG+R +      G  ++ E     L      
Sbjct: 155 YCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQ-----GA-SVAEILYQQLSPVD-- 206

Query: 392 YRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
              + P + GH          Q+    L++DP+ R   +  +
Sbjct: 207 -VSLPPWIAGH-------PLGQVLRKALNKDPRQRAASAPAL 240

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 69.1 bits (169), Expect = 3e-13
 Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 56/300 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K    + VA+K +N +G    ++++ E   +  L H  
Sbjct: 12  LGSGQFGVVHLG----------KWRAQIKVAIKAIN-EGAMSEEDFIEEAKVMMKLSHPK 60

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     +V EFM  G L N+L +R   L   + + +     +G+ +L   +
Sbjct: 61  LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS 120

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               I+RD    N L+ +            +                K+SDFG+ +   +
Sbjct: 121 ---FIHRDLAARNCLVSST----------GV---------------VKVSDFGMTRYVLD 152

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
            D+   S+       ++ PE       +S+SDV+SFGV++ E+ T  +   + + N E  
Sbjct: 153 -DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-- 209

Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
           +VE          R +RL  P+L      +       +   C    P+ RP  +E++ A+
Sbjct: 210 VVE-------MISRGFRLYRPKLASMTVYE-------VMYSCWHEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 52/256 (20%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKE 181
           +L L+   F  E  LGE  FG ++KG +   G    +      VA+KTL + +  Q   E
Sbjct: 1   ELPLSAVRFMEE--LGECAFGKIYKGHLYLPGMDHAQ-----LVAIKTLKDINNPQQWGE 53

Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----------- 230
           +  E + + +L H N+V L+G   ++    +++E++ +G L   L  RS           
Sbjct: 54  FQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDE 113

Query: 231 -----LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
                  L     + IA+  A G+ +L   +    +++D    NIL+             
Sbjct: 114 DGTVKSSLDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIG------------ 158

Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                        +  + K+SD GL+++    D   V  + +    +  PE +M G  +S
Sbjct: 159 -------------EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSS 205

Query: 346 RSDVYSFGVVLLEMLT 361
            SD++SFGVVL E+ +
Sbjct: 206 DSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 68.9 bits (168), Expect = 4e-13
 Identities = 87/310 (28%), Positives = 133/310 (42%), Gaps = 70/310 (22%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R +  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 2   EIPRESLRLDVKLGQGCFGEVWMGTW---NGTT--------KVAIKTLK-PGTMMPEAFL 49

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMK 240
            E   +  L H  LV L    + ++   +V EFM +GSL + L     + L LP  + M 
Sbjct: 50  QEAQIMKKLRHDKLVPLYA-VVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDM- 107

Query: 241 IALGAAKGLAFLHEEAER-PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            A   A G+A++    ER   I+RD + +NIL+     +N      C             
Sbjct: 108 -AAQIADGMAYI----ERMNYIHRDLRAANILV----GDNL----VC------------- 141

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLL 357
               K++DFGLA+   + + T    R    +   + APE  + G  T +SDV+SFG++L 
Sbjct: 142 ----KIADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194

Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH 417
           E++T  R       N         R  L +  R YR+  P+          +   +L   
Sbjct: 195 ELVTKGRVPYPGMVN---------REVLEQVERGYRMPCPQ-------GCPESLHELMKL 238

Query: 418 CLSRDPKARP 427
           C  +DP  RP
Sbjct: 239 CWKKDPDERP 248

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 21/229 (9%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VH 194
           LGEG FG V +   E  G    +P   +TVAVK L  +   +   + ++E+  +  +  H
Sbjct: 20  LGEGCFGQVVRA--EAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH 77

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF-LH 253
            N++ L+G C ++    ++ E+  +G+L   L  R  P P                F + 
Sbjct: 78  KNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGP-------------DYTFDIT 124

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
           +  E  + ++D  +        R   Y +   CI+  L   N+L  + N  K++DFGLA+
Sbjct: 125 KVPEEQLSFKDLVSC--AYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLAR 182

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
              + D    ++       + APE +     T +SDV+SFG+++ E+ T
Sbjct: 183 GVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 70.0 bits (171), Expect = 5e-13
 Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D   +   + ++E+  +  +  H
Sbjct: 20  LGEGCFGQVVMA--EAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH 77

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P      M  +    K    L E
Sbjct: 78  KNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPP-----GMDYSFDTCK----LPE 128

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD 313
           E    + ++D  +        R   Y     CI+  L   N+L  + N  K++DFGLA+D
Sbjct: 129 EQ---LTFKDLVSC--AYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARD 183

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 184 VHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 73/309 (23%), Positives = 120/309 (38%), Gaps = 80/309 (25%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFL 189
           F     +G+G FG V+K   +          T   VA+K ++ +  +   E +  E+ FL
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKR---------TNQVVAIKVIDLEEAEDEIEDIQQEIQFL 53

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
                  + K  G  ++  +  ++ E+   GS  + L  +   L  +    I      GL
Sbjct: 54  SQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL--KPGKLDETYIAFILREVLLGL 111

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LHEE     I+RD K +NILL                           + + KL+DFG
Sbjct: 112 EYLHEEG---KIHRDIKAANILLSE-------------------------EGDVKLADFG 143

Query: 310 LAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           ++     G  T   ++    +GT  + APE +       ++D++S G+  +E+  G    
Sbjct: 144 VS-----GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKG---- 194

Query: 367 DKNRPNGE-HNLVEWARPHLGERRRFYRLID----PRLEGH-FS--IKGAQKAAQLAAHC 418
               P  + H +            R   LI     P LEG+ FS   K         + C
Sbjct: 195 --EPPLSDLHPM------------RVLFLIPKNNPPSLEGNKFSKPFKD------FVSLC 234

Query: 419 LSRDPKARP 427
           L++DPK RP
Sbjct: 235 LNKDPKERP 243

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 69.1 bits (169), Expect = 6e-13
 Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 51/242 (21%)

Query: 130 NFRPESL-----LGEGGFGCVFKGWIEENGTAPVKP-GTGLTVAVKTLNHDGLQG-HKEW 182
           + R E L     LG G  G V K          VK   TG  +A K ++        K+ 
Sbjct: 1   DLRNEDLETISDLGAGNGGSVSK----------VKHIPTGTVMAKKVVHIGAKSSVRKQI 50

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L E+  + +     +V   G  + ++   +  EFM  GSL+  ++++  P+P  I  KIA
Sbjct: 51  LRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDR-IYKKGGPIPVEILGKIA 109

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   +GL +L+      +++RD K SNIL+++ R +                        
Sbjct: 110 VAVVEGLTYLYNVHR--IMHRDIKPSNILVNS-RGQ------------------------ 142

Query: 303 AKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            KL DFG++     G+  + ++   +GT  Y +PE +  G  T +SDV+S G+ ++E+  
Sbjct: 143 IKLCDFGVS-----GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELAL 197

Query: 362 GR 363
           G+
Sbjct: 198 GK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 75/316 (23%), Positives = 118/316 (37%), Gaps = 57/316 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNF 188
           N +  + LG G FG VF    +         G    V VK L          E+  E++ 
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEE----GGETLVLVKALQKTKDENLQSEFRRELDM 61

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL------FRRSLPLPWSIRMKIA 242
              L H N+V+L+G C E +   ++ E+   G L+  L        +  P P S + K+A
Sbjct: 62  FRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVA 121

Query: 243 LGA--AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           L    A G+  L   +    ++RD    N                C+         +   
Sbjct: 122 LCTQIALGMDHL---SNARFVHRDLAARN----------------CL---------VSSQ 153

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+S   L+KD     + +     +    + APE V     +++SDV+SFGV++ E+ 
Sbjct: 154 REVKVSLLSLSKD-VYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF 212

Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T                 E     L +     RL   +LE         +  +L   C +
Sbjct: 213 T---------------QGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWA 257

Query: 421 RDPKARPLMSEVVEAL 436
            +PK RP  SE+V AL
Sbjct: 258 VNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 46/233 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V+K              TGL  A K +  +  +  ++++ E++ L +  H N
Sbjct: 13  LGDGAFGKVYKA---------QHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN 63

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V L      +++  ++ EF   G+L++ +      L       +     + L FLH   
Sbjct: 64  IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK 123

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K  NILL                           D + KL+DFG+ AK+  
Sbjct: 124 ---VIHRDLKAGNILLT-------------------------LDGDVKLADFGVSAKNKS 155

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEMLTGR 363
              K       +GT  + APE V            ++D++S G+ L+E+    
Sbjct: 156 TLQKRDT---FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME 205

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 68.0 bits (166), Expect = 1e-12
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 41/235 (17%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--WLAEVNFLGD 191
           E +LG G FG + +G ++     P K    L VA+ TL   G    +   +LAE   LG 
Sbjct: 10  ERILGTGRFGELCRGCLK----LPSK--RELPVAIHTL-RAGCSDKQRRGFLAEALTLGQ 62

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
             H N+V+L G     +  ++V E+M  G+L++ L +    L     M +  G A G+ +
Sbjct: 63  FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKY 122

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG-L 310
           L   +E   +++      +L+++                         D   K+S F  L
Sbjct: 123 L---SEMGYVHKGLAAHKVLVNS-------------------------DLVCKISGFRRL 154

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
            +D  E   T +S +      +AAPE +   H +S SDV+SFG+V+ E+++ G R
Sbjct: 155 QEDKSEAIYTTMSGKSPVL--WAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGER 207

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 68.0 bits (167), Expect = 1e-12
 Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 62/248 (25%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNH-----DGLQGHKEW 182
            +     LGEG +  V+K   +E G           VA+K   L       DG+  +   
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGR---------IVAIKKIKLGERKEAKDGI--NFTA 49

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL-PWSIR--M 239
           L E+  L +L H N++ L+          LV+EFM    LE  +  +S+ L P  I+  M
Sbjct: 50  LREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIKSYM 108

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            + L   +GL +LH      +++RD K +N+L+ +                         
Sbjct: 109 LMTL---RGLEYLH---SNWILHRDLKPNNLLIAS------------------------- 137

Query: 300 DYNAKLSDFGLAKD--GPEGDKTH-VSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVV 355
           D   KL+DFGLA+    P    TH V TR      Y APE +    H     D++S G +
Sbjct: 138 DGVLKLADFGLARSFGSPNRKMTHQVVTRW-----YRAPELLFGARHYGVGVDMWSVGCI 192

Query: 356 LLEMLTGR 363
             E+L   
Sbjct: 193 FAELLLRV 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 67.6 bits (166), Expect = 2e-12
 Identities = 66/247 (26%), Positives = 99/247 (40%), Gaps = 77/247 (31%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           LG+G FG V+    +E G           VA+K +     +    W     L EV  L  
Sbjct: 7   LGDGTFGSVYLARNKETGE---------LVAIKKMK----KKFYSWEECMNLREVKSLRK 53

Query: 192 L-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF-----RRSLPLPWSIRMKIALGA 245
           L  H N+VKL     E+D+   V+E+M     E +L+     R+  P   S+   I    
Sbjct: 54  LNEHPNIVKLKEVFRENDELYFVFEYM-----EGNLYQLMKDRKGKPFSESVIRSIIYQI 108

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            +GLA +H+       +RD K  N+L+                               K+
Sbjct: 109 LQGLAHIHKHG---FFHRDLKPENLLVS-------------------------GPEVVKI 140

Query: 306 SDFGLAKD----GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-----DVYSFGVVL 356
           +DFGLA++     P  D  +VSTR      Y APE +    L S S     D+++ G ++
Sbjct: 141 ADFGLAREIRSRPPYTD--YVSTR-----WYRAPEIL----LRSTSYSSPVDIWALGCIM 189

Query: 357 LEMLTGR 363
            E+ T R
Sbjct: 190 AELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 91/343 (26%), Positives = 137/343 (39%), Gaps = 61/343 (17%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-V 193
           +LG G FG V    +E +     K  +  TVAVK L        HK  ++E+  L  +  
Sbjct: 14  VLGHGAFGKV----VEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGN 69

Query: 194 HLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWS--------------- 236
           HLN+V L+G C + +  L+V  EF   G+L N L  +R    P+                
Sbjct: 70  HLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVE 129

Query: 237 ---IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF-------- 285
              +  +I  G A  L    + +         +T ++    +  E+   + F        
Sbjct: 130 QSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEF 189

Query: 286 -----CIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHV---STRVMGTYGYAAPE 336
                CI+  L   N+L  + N  K+ DFGLA+D  + D  +V   S R+     + APE
Sbjct: 190 LASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK-DPDYVRKGSARL--PLKWMAPE 246

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T++SDV+SFGV+L E+ +   S     P  + N     R   G R R      
Sbjct: 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGAS---PYPGVQINEEFCQRLKDGTRMRAPENAT 303

Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
           P +              +   C   DPK RP  S +VE L  L
Sbjct: 304 PEIYR------------IMLACWQGDPKERPTFSALVEILGDL 334

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
           +G G FG V+      N        T   VAVK +++ G Q +++W   + EV FL  L 
Sbjct: 29  IGHGSFGAVY---FATNSH------TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK 79

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N ++  G  +++    LV E+   GS  + L     PL       I  GA +GLA+LH
Sbjct: 80  HPNTIEYKGCYLKEHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH 138

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                 +I+RD K  NILL                          +    KL+DFG A  
Sbjct: 139 SHN---MIHRDIKAGNILLT-------------------------EPGQVKLADFGSAS- 169

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
                K+  +   +GT  + APE ++    G    + DV+S G+  +E+
Sbjct: 170 -----KSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 67.0 bits (163), Expect = 2e-12
 Identities = 84/305 (27%), Positives = 131/305 (42%), Gaps = 70/305 (22%)

Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L E   
Sbjct: 7   SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 54

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
           +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M  A   
Sbjct: 55  MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 111

Query: 246 AKGLAFLHEEAER-PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           A G+A++    ER   ++RD + +NIL+                      N++      K
Sbjct: 112 ASGMAYV----ERMNYVHRDLRAANILVG--------------------ENLV-----CK 142

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           ++DFGLA+   + + T    R    +   + APE  + G  T +SDV+SFG++L E+ T 
Sbjct: 143 VADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 199

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
            R       N         R  L +  R YR+  P        +  +    L   C  ++
Sbjct: 200 GRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKE 243

Query: 423 PKARP 427
           P+ RP
Sbjct: 244 PEERP 248

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 66.8 bits (163), Expect = 2e-12
 Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 76/315 (24%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW----------LAE 185
            LG G FGCV+K   + NG           +A+K +N       K+           ++E
Sbjct: 7   HLGSGAFGCVYKVRKKNNG--------QNLLALKEINVHNPAFGKDKRERDKSIGDIVSE 58

Query: 186 VNFLGD-LVHLNLVKLIGYCIEDDQRLLVYEFM---PRGSLENHLFRRSLPLP----WSI 237
           V  + + L H N+V+     +E+D+  +V + +   P G   N L  +         W+I
Sbjct: 59  VTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNI 118

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++ L     L +LH+E  + +++RD   +NI                         ML
Sbjct: 119 FVQMVLA----LRYLHKE--KRIVHRDLTPNNI-------------------------ML 147

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
            +D    ++DFGLAK      K    T V+GT  Y+ PE V       ++DV++FG +L 
Sbjct: 148 GEDDKVTITDFGLAKQKQPESKL---TSVVGTILYSCPEIVKNEPYGEKADVWAFGCILY 204

Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH 417
           +M T         P    N++  A       +    + +P  EG +S    +    +   
Sbjct: 205 QMCT------LQPPFYSTNMLSLA------TKIVEAVYEPLPEGMYS----EDVTDVITS 248

Query: 418 CLSRDPKARPLMSEV 432
           CL+ D +ARP + +V
Sbjct: 249 CLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 66.8 bits (163), Expect = 3e-12
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 48/240 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLA 184
             + E ++G G FG V  G ++  G   +       VA+KTL      G+ E     +L+
Sbjct: 5   CIKIEKVIGAGEFGEVCSGRLKLPGKREI------PVAIKTLK----AGYTEKQRRDFLS 54

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E + +G   H N++ L G   +    ++V E+M  GSL+  L +          + +  G
Sbjct: 55  EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRG 114

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+ +L   ++   ++RD    NIL+++                    N++      K
Sbjct: 115 IASGMKYL---SDMGYVHRDLAARNILVNS--------------------NLV-----CK 146

Query: 305 LSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +SDFGL++   D PE   T    ++     + APE +     TS SDV+S+G+V+ E+++
Sbjct: 147 VSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 77/327 (23%), Positives = 123/327 (37%), Gaps = 82/327 (25%)

Query: 124 LKLATRNFRPESLL------GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           L+L      P S L      GEG  G V                TG  VAVK ++    Q
Sbjct: 8   LQLVVDPGDPRSYLDNFVKIGEGSTGIV---------CIATDKSTGRQVAVKKMDLRKQQ 58

Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
             +    EV  + D  H N+V++    +  D+  +V EF+  G+L +        +    
Sbjct: 59  RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTD--------IVTHT 110

Query: 238 RMK------IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
           RM       + L   K L+FLH    + VI+RD K+ +ILL +                 
Sbjct: 111 RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTS----------------- 150

Query: 292 FFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS 347
                   D   KLSDFG    ++K+ P          ++GT  + APE +      +  
Sbjct: 151 --------DGRVKLSDFGFCAQVSKEVPR------RKSLVGTPYWMAPEVISRLPYGTEV 196

Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
           D++S G++++EM+ G        P             L   +R    + P+L+     K 
Sbjct: 197 DIWSLGIMVIEMVDGEPPYFNEPP-------------LQAMKRIRDNLPPKLKNL--HKV 241

Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVVE 434
           + +        L RDP  R   +E++ 
Sbjct: 242 SPRLRSFLDRMLVRDPAQRATAAELLN 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 59/235 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   N T          VAVKTL   G    + +L E N +  L H  
Sbjct: 14  LGAGQFGEVWMGYYN-NST---------KVAVKTLK-PGTMSVQAFLEEANLMKTLQHDK 62

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLH 253
           LV+L     +++   ++ E+M +GSL + L       + LP  I     +  A+G+A++ 
Sbjct: 63  LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 120

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK- 312
               +  I+RD + +N+L+                     +  L      K++DFGLA+ 
Sbjct: 121 R---KNYIHRDLRAANVLV---------------------SESLM----CKIADFGLARV 152

Query: 313 ------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
                    EG K  +         + APE +  G  T +SDV+SFG++L E++T
Sbjct: 153 IEDNEYTAREGAKFPIK--------WTAPEAINFGSFTIKSDVWSFGILLYEIVT 199

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 73/262 (27%), Positives = 104/262 (39%), Gaps = 68/262 (25%)

Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK-TLNHDGLQG-HKEWLA 184
             R++     LGEG FG V+K           +  TG  VA+K  L H+   G     L 
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKA---------RQIKTGRVVALKKILMHNEKDGFPITALR 56

Query: 185 EVNFLGDLVHLNLVKLIGYCIE-----DDQRLLVYEFMP------RGSLENHLFRRSLPL 233
           E+  L  L H N+V LI   +E       +R  VY   P       G LEN   + +   
Sbjct: 57  EIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTES- 115

Query: 234 PWSIR--MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
              I+  M   L   +G+ +LHE     +++RD K +NIL+D     N G          
Sbjct: 116 --QIKCYMLQLL---EGINYLHENH---ILHRDIKAANILID-----NQG---------- 152

Query: 292 FFNNMLFQDYNAKLSDFGLAK---------DGPEGDKTHVSTRVMGTYGYAAPEYVM-TG 341
                       K++DFGLA+          G  G  T   T ++ T  Y  PE ++   
Sbjct: 153 ----------ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGER 202

Query: 342 HLTSRSDVYSFGVVLLEMLTGR 363
             T+  D++  G V  EM T R
Sbjct: 203 RYTTAVDIWGIGCVFAEMFTRR 224

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 74/240 (30%), Positives = 93/240 (38%), Gaps = 64/240 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVK-PGTGLTVAVKTLNHD-----GLQGH----KEWLAEV 186
           LG GGFG V            VK      T A+K +        G Q H    KE L E 
Sbjct: 1   LGVGGFGRVEL----------VKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC 50

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVY---EFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
           N      H  +VKL  Y    D++  +Y   E+   G L   L  R L   ++ R  IA 
Sbjct: 51  N------HPFIVKL--YRTFKDKKY-IYMLMEYCLGGELWTILRDRGLFDEYTARFYIA- 100

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                  +LH    R +IYRD K  N+LLD          G+                  
Sbjct: 101 CVVLAFEYLHN---RGIIYRDLKPENLLLD--------SNGY-----------------V 132

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           KL DFG AK    G KT       GT  Y APE ++        D +S G++L E+LTGR
Sbjct: 133 KLVDFGFAKKLKSGQKTWT---FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 66.2 bits (161), Expect = 6e-12
 Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 52/256 (20%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HK 180
           ++ L+T  F  E  LGE  FG V+KG +   GTAP +      VA+KTL  D  +G   +
Sbjct: 1   EINLSTVRFMEE--LGEDRFGKVYKGHL--FGTAPGEQTQ--AVAIKTLK-DKAEGPLRE 53

Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------- 230
           E+  E      L H N+V L+G   ++    +++ +     L   L  RS          
Sbjct: 54  EFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDD 113

Query: 231 -----LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
                  L  +  + I    A G+ FL   +   V+++D  T N+L+             
Sbjct: 114 DKTVKSTLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLV------------- 157

Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                       F   N K+SD GL ++    D   +    +    + +PE +M G  + 
Sbjct: 158 ------------FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSI 205

Query: 346 RSDVYSFGVVLLEMLT 361
            SD++S+GVVL E+ +
Sbjct: 206 DSDIWSYGVVLWEVFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 65.5 bits (160), Expect = 6e-12
 Identities = 71/328 (21%), Positives = 125/328 (38%), Gaps = 83/328 (25%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLA 184
             NF+ E  +G+G F  V+K     +G           VA+K +    +   K   + L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDG---------RVVALKKVQIFEMMDAKARQDCLK 51

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE---NHLFRRSLPLP----WSI 237
           E++ L  L H N++K +   IE+++  +V E    G L     H  ++   +P    W  
Sbjct: 52  EIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKY 111

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++       L  +H    + +++RD K +N+ + A                       
Sbjct: 112 FVQL----CSALEHMH---SKRIMHRDIKPANVFITA----------------------- 141

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
                 KL D GL +      KT  +  ++GT  Y +PE +       +SD++S G +L 
Sbjct: 142 --TGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 197

Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGHFSIKGAQ 409
           EM                       P  G++   Y L          P    H+S    +
Sbjct: 198 EM------------------AALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYS----E 235

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVEALK 437
           +   L + C++ DP+ RP +S V++  K
Sbjct: 236 ELRDLVSRCINPDPEKRPDISYVLQVAK 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 65.3 bits (159), Expect = 6e-12
 Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 54/247 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--EVN 187
            +    ++G G FG V    +               V +K +  + +   +   A  E  
Sbjct: 1   KYEKIRVVGRGAFGIV---HLCRRKADQKL------VIIKQIPVEQMTKDERLAAQNECQ 51

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------NHLFRRSLPLPWSIRMK 240
            L  L H N+++     +ED   ++V E+ P G+L        N L      L + +++ 
Sbjct: 52  VLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQIL 111

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +A         LH    + +++RD KT NILLD  +                   ++   
Sbjct: 112 LA---------LHHVHTKLILHRDLKTQNILLDKHK------------------MVV--- 141

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFG++K      K+   T V+GT  Y +PE         +SD+++ G VL E+ 
Sbjct: 142 ---KIGDFGISKI--LSSKSKAYT-VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA 195

Query: 361 TGRRSMD 367
           + +R+ +
Sbjct: 196 SLKRAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 65.6 bits (160), Expect = 7e-12
 Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 46/239 (19%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-LAEVNF 188
           NF+    LGEG +  V+KG    N T      TG  VA+K ++ D  +G     + E++ 
Sbjct: 1   NFKQLEKLGEGTYATVYKG---RNRT------TGEIVALKEIHLDAEEGTPSTAIREISL 51

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMP---RGSLENHLFRRSLPLPWSIRMKIALGA 245
           + +L H N+V+L      +++ +LV+E+M    +  ++ H  R +L           L  
Sbjct: 52  MKELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQL-- 109

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KG+AF HE     V++RD K  N+L++                         +    KL
Sbjct: 110 LKGIAFCHENR---VLHRDLKPQNLLIN-------------------------KRGELKL 141

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           +DFGLA+       T  +  V  T  Y AP+ ++     S S D++S G ++ EM+TGR
Sbjct: 142 ADFGLARAFGIPVNTFSNEVV--TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 65.9 bits (161), Expect = 7e-12
 Identities = 77/266 (28%), Positives = 106/266 (39%), Gaps = 65/266 (24%)

Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           L +  +      NDL+           +G G  G V+K   ++ G           +AVK
Sbjct: 3   LTIDGQKYPADLNDLEN-------LGEIGSGTCGQVYKMRFKKTGH---------VMAVK 46

Query: 170 TLNHDGLQGHKEWLAEVNFLGDL-VHL------NLVKLIGYCIEDDQRLLVYEFMPRGSL 222
            +   G   +KE    +  L DL V L       +VK  GY I D    +  E M    L
Sbjct: 47  QMRRTG---NKEENKRI--LMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CL 100

Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
           +  L R   P+P  I  K+ +   K L +L E+    VI+RD K SNILLDA        
Sbjct: 101 DKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDA-------- 150

Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD-KTHVSTRVMGTYGYAAPEYVMTG 341
                              N KL DFG++  G   D K    TR  G   Y APE +   
Sbjct: 151 -----------------SGNVKLCDFGIS--GRLVDSKAK--TRSAGCAAYMAPERIDPP 189

Query: 342 HLTS----RSDVYSFGVVLLEMLTGR 363
                   R+DV+S G+ L+E+ TG+
Sbjct: 190 DPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 65.5 bits (160), Expect = 8e-12
 Identities = 69/234 (29%), Positives = 97/234 (41%), Gaps = 53/234 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK--TLNHDGLQGHKEWLAEVNFLGDLVH 194
           +GEG +G VFK    E         TG  VA+K    + D     K  L E+  L  L H
Sbjct: 9   IGEGSYGVVFKCRNRE---------TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH 59

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            NLV LI       ++L LV+E+    ++ N L +    +P  +  KI     + + F H
Sbjct: 60  PNLVNLI-EVFRRKRKLHLVFEYCDH-TVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCH 117

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK- 312
           +      I+RD K  NIL+                          +    KL DFG A+ 
Sbjct: 118 KHN---CIHRDVKPENILIT-------------------------KQGQIKLCDFGFARI 149

Query: 313 -DGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLT--SRSDVYSFGVVLLEMLTG 362
             GP  D T +V+TR      Y APE ++ G        DV++ G V  E+LTG
Sbjct: 150 LTGPGDDYTDYVATR-----WYRAPE-LLVGDTQYGPPVDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 56/182 (30%), Positives = 79/182 (43%), Gaps = 46/182 (25%)

Query: 204 CIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLP----WSIRMKIALGAAKGLAFLHEEAE 257
           C + + RL  V EF+  G L  H+ R R LP      +S  + +AL       FLHE   
Sbjct: 64  CFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALN------FLHE--- 114

Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG-PE 316
           R +IYRD K  N+LLDA                         + + KL+D+G+ K+G   
Sbjct: 115 RGIIYRDLKLDNVLLDA-------------------------EGHIKLTDYGMCKEGIRP 149

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGE 374
           GD T   +   GT  Y APE +         D ++ GV++ EM+ GR   D      N +
Sbjct: 150 GDTT---STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD 206

Query: 375 HN 376
            N
Sbjct: 207 QN 208

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 45/225 (20%)

Query: 204 CIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
           C +   RL LV E++  G L  H+ +R   LP       A      L FLHE   R +IY
Sbjct: 64  CFQTTSRLFLVIEYVNGGDLMFHM-QRQRKLPEEHARFYAAEICIALNFLHE---RGIIY 119

Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG-PEGDKTH 321
           RD K  N+LLD                          D + KL+D+G+ K+G   GD T 
Sbjct: 120 RDLKLDNVLLD-------------------------ADGHIKLTDYGMCKEGLGPGDTT- 153

Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 381
             +   GT  Y APE +         D ++ GV++ EM+ GR   D    N + N  ++ 
Sbjct: 154 --STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211

Query: 382 RPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
              + E+         R+    S+    KA+ +    L++DPK R
Sbjct: 212 FQVILEK-------PIRIPRFLSV----KASHVLKGFLNKDPKER 245

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 63/234 (26%), Positives = 93/234 (39%), Gaps = 51/234 (21%)

Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLVHLN 196
           G +G VF            K  TG   A+K +    +       + L E + L       
Sbjct: 4   GAYGRVFLA---------KKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPY 54

Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           +VKL  Y  +  + L LV E++P G L   L      L   +           L +LH  
Sbjct: 55  VVKLY-YSFQGKKNLYLVMEYLPGGDLA-SLLENVGSLDEDVARIYIAEIVLALEYLHSN 112

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               +I+RD K  NIL+D+                   N  L      KL+DFGL+K G 
Sbjct: 113 G---IIHRDLKPDNILIDS-------------------NGHL------KLTDFGLSKVGL 144

Query: 316 EGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTG 362
              + +++       R++GT  Y APE V+ G   S++ D +S G +L E L G
Sbjct: 145 VRRQINLNDDEKEDKRIVGTPDYIAPE-VILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 91/347 (26%), Positives = 135/347 (38%), Gaps = 66/347 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH-- 194
           LG G FG V    IE +     K  T  TVAVK L       H E  A ++ L  L+H  
Sbjct: 15  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIG 68

Query: 195 --LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRRSLP--- 232
             LN+V L+G C +    L+V  EF   G+L N+L                FR+      
Sbjct: 69  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYG 128

Query: 233 -LPWSIRMKI----ALGAAKGLAFLH---------EEAERPVIYRDFKTSNILL----DA 274
            +   ++ ++    +  ++    F+          EEAE+  +Y+   T   L+      
Sbjct: 129 DISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQV 188

Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
            +   +     CI+  L   N+L  + N  K+ DFGLA+D  +               + 
Sbjct: 189 AKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 248

Query: 334 APEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-RPHLGERRRFY 392
           APE +     T +SDV+SFGV+L E+     S+  +   G     E+  R   G R R  
Sbjct: 249 APETIFDRVYTIQSDVWSFGVLLWEIF----SLGASPYPGVKIDEEFCRRLKEGTRMRAP 304

Query: 393 RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
               P +             Q    C   +P  RP  SE+VE L  L
Sbjct: 305 DYTTPEM------------YQTMLDCWHGEPSQRPTFSELVEHLGNL 339

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 65.2 bits (159), Expect = 1e-11
 Identities = 88/308 (28%), Positives = 129/308 (41%), Gaps = 83/308 (26%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL------QGHKEWLAEVNF 188
            +LG+GG+G VF+  + +   A     TG   A+K L    +        H +  AE N 
Sbjct: 2   KVLGKGGYGKVFQ--VRKVTGA----DTGKIFAMKVLKKATIVRNQKDTAHTK--AERNI 53

Query: 189 LGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLP-----WSIRMKIA 242
           L  + H  +V LI Y  +   +L L+ E++  G L  HL R  + +      +   + +A
Sbjct: 54  LEAVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLA 112

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           L        LH++    +IYRD K  NILLDA               G           +
Sbjct: 113 LE------HLHQQG---IIYRDLKPENILLDA--------------QG-----------H 138

Query: 303 AKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
            KL+DFGL K+   EG  TH      GT  Y APE +M +GH     D +S G ++ +ML
Sbjct: 139 VKLTDFGLCKESIHEGTVTHT---FCGTIEYMAPEILMRSGH-GKAVDWWSLGALMYDML 194

Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQLAAHC 418
           TG                  A P   E R+  + ID  L+G  ++      +A  L    
Sbjct: 195 TG------------------APPFTAENRK--KTIDKILKGKLNLPPYLTPEARDLLKKL 234

Query: 419 LSRDPKAR 426
           L R+P +R
Sbjct: 235 LKRNPSSR 242

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 76/307 (24%), Positives = 115/307 (37%), Gaps = 74/307 (24%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFL 189
           ++   L+G G +G V++G             TG  VA+K +N D       +   EV  L
Sbjct: 3   YQRLELIGRGAYGAVYRG---------KHVPTGRVVALKIINLDTPDDDVSDIQREVALL 53

Query: 190 GDLVHL---NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK----I 241
             L      N+ K  G       RL ++ E+   GS+      R+L     I  K    I
Sbjct: 54  SQLRQSQPPNITKYYG-SYLKGPRLWIIMEYAEGGSV------RTLMKAGPIAEKYISVI 106

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                  L ++H+     VI+RD K +NIL+                             
Sbjct: 107 IREVLVALKYIHKV---GVIHRDIKAANILVTN-------------------------TG 138

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEML 360
           N KL DFG+A    +      ST V GT  + APE +  G    +++D++S G+ + EM 
Sbjct: 139 NVKLCDFGVAALLNQNSSKR-STFV-GTPYWMAPEVITEGKYYDTKADIWSLGITIYEMA 196

Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG-HFSIKGAQKAAQLAAHCL 419
           TG              L+  ++P             PRLE   +S    +   +  A CL
Sbjct: 197 TGNPPYSDVDAFRAMMLIPKSKP-------------PRLEDNGYS----KLLREFVAACL 239

Query: 420 SRDPKAR 426
             +PK R
Sbjct: 240 DEEPKER 246

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 64.2 bits (156), Expect = 1e-11
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHL 195
           LG G FGCV KG  +            + VA+K L ++  +    E + E   +  L + 
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQ-------IDVAIKVLKNENEKSVRDEMMREAEIMHQLDNP 55

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            +V++IG C E +  +LV E    G L   L  +   +  S  +++    + G+ +L   
Sbjct: 56  YIVRMIGVC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG- 113

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             +  ++RD    N+L                        ++ Q Y AK+SDFGL+K   
Sbjct: 114 --KNFVHRDLAARNVL------------------------LVNQHY-AKISDFGLSK-AL 145

Query: 316 EGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             D ++   R  G +   + APE +     +SRSDV+S+G+ + E  +
Sbjct: 146 GADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFS 193

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 73/270 (27%), Positives = 100/270 (37%), Gaps = 82/270 (30%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEV 186
           +F    ++G G FG V+               TG   A+K L    +    +     AE 
Sbjct: 2   DFEVIKVIGRGAFGEVWLVR---------DKDTGQVYAMKVLRKSDMIKRNQIAHVRAER 52

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MK 240
           + L D     +VKL  Y  +D++ L LV E+MP G L N L R+ +    + R     + 
Sbjct: 53  DILADADSPWIVKLY-YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELV 111

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +AL +   L F+H         RD K  NIL+DA                         D
Sbjct: 112 LALDSVHKLGFIH---------RDIKPDNILIDA-------------------------D 137

Query: 301 YNAKLSDFGLAKDGPEGDKT----------------------HVSTRVM-----GTYGYA 333
            + KL+DFGL K   +                          H   RV      GT  Y 
Sbjct: 138 GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYI 197

Query: 334 APEYVMTGH-LTSRSDVYSFGVVLLEMLTG 362
           APE V+ G       D +S GV+L EML G
Sbjct: 198 APE-VLRGTPYGLECDWWSLGVILYEMLYG 226

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 64/265 (24%)

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRM 239
           L E+  L  L H N++    + ++D+  L+  E+   G+L + + R+          +  
Sbjct: 47  LNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWY 106

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
              + +A  ++++H+     +++RD KT NI L         K G               
Sbjct: 107 LFQIVSA--VSYIHKAG---ILHRDIKTLNIFLT--------KAGL-------------- 139

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
               KL DFG++K    G +  ++  V+GT  Y +PE         +SD+++ G VL E+
Sbjct: 140 ---IKLGDFGISKI--LGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYEL 194

Query: 360 LTGRRSMDKNRPNGEHNLV------EWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           LT +R+ D   P    NLV       +                P +  +     + +   
Sbjct: 195 LTLKRTFDATNPL---NLVVKIVQGNYT---------------PVVSVY-----SSELIS 231

Query: 414 LAAHCLSRDPKARPLMSEVVEALKP 438
           L    L +DP+ RP   EV++    
Sbjct: 232 LVHSLLQQDPEKRPTADEVLDQPLL 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 63.8 bits (155), Expect = 3e-11
 Identities = 85/307 (27%), Positives = 124/307 (40%), Gaps = 72/307 (23%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVN 187
           FR   +LG+GGFG V    +           TG   A K L    ++   G    L E  
Sbjct: 2   FRQYRVLGKGGFGEVCACQVR---------ATGKMYACKRLEKKRIKKRKGESMALNEKQ 52

Query: 188 FLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            L + V+   V  + Y  E  D   LV   M  G L+ H++  ++  P     +    AA
Sbjct: 53  IL-EKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIY--NMGNPGFEEERALFYAA 109

Query: 247 K---GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           +   GL  LH E     +YRD K  NILLD     +YG                    + 
Sbjct: 110 EILCGLEDLHREN---TVYRDLKPENILLD-----DYG--------------------HI 141

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           ++SD GLA   PEG+   +  RV GT GY APE +     T   D +  G ++ EM+ G+
Sbjct: 142 RISDLGLAVKIPEGES--IRGRV-GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYR-LIDPRL---EGHFSIKGAQKAAQLAAHCL 419
                              P  G + +  R  +D R+   E  +S K +++A  +    L
Sbjct: 199 ------------------SPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLL 240

Query: 420 SRDPKAR 426
           ++DPK R
Sbjct: 241 TKDPKQR 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 64.0 bits (156), Expect = 3e-11
 Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 32/149 (21%)

Query: 215 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
           E M  GSL+  L +++  +P +I  KI++   +GL +L E+    +++RD K SNIL+++
Sbjct: 79  EHMDGGSLDQVL-KKAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNS 135

Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 334
            R E                         KL DFG++  G   D   ++   +GT  Y +
Sbjct: 136 -RGE------------------------IKLCDFGVS--GQLIDS--MANSFVGTRSYMS 166

Query: 335 PEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           PE +   H T +SD++S G+ L+EM  GR
Sbjct: 167 PERLQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 63.1 bits (153), Expect = 4e-11
 Identities = 73/322 (22%), Positives = 121/322 (37%), Gaps = 75/322 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEV 186
           NFR E  +G G F  V++     +G           VA+K +    L   +   + + E+
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGV---------PVALKKVQIFDLMDAKARADCIKEI 53

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLFRRSLPLPWSIRMKIAL 243
           + L  L H N++K     IED++  +V E    G L     H  ++   +P     K  +
Sbjct: 54  DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFV 113

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                L  +H    R V++RD K +N+ + A      G  G     G FF++        
Sbjct: 114 QLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGL----GRFFSS-------- 158

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
                          KT  +  ++GT  Y +PE +       +SD++S G +L EM    
Sbjct: 159 ---------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM---- 199

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGHFSIKGAQKAAQLA 415
                              P  G++   Y L          P    H+S    ++  QL 
Sbjct: 200 --------------AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS----EELRQLV 241

Query: 416 AHCLSRDPKARPLMSEVVEALK 437
             C++ DP+ RP ++ V +  K
Sbjct: 242 NMCINPDPEKRPDITYVYDVAK 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 63.1 bits (154), Expect = 4e-11
 Identities = 65/249 (26%), Positives = 94/249 (37%), Gaps = 69/249 (27%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H 194
           ++GEG +G V+K    +         TG  VA+K ++       +E   E N L     H
Sbjct: 13  VIGEGTYGKVYKA-RHKK--------TGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNH 62

Query: 195 LNLVKLIG------YCIEDDQRLLVYEFMPRGSLEN-----HLFRRSLPLPWSIRMKIAL 243
            N+    G          DDQ  LV E    GS+ +         + L   W     IA 
Sbjct: 63  PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW-----IAY 117

Query: 244 ---GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GLA+LHE     VI+RD K  NILL                          ++
Sbjct: 118 ILRETLRGLAYLHE---NKVIHRDIKGQNILLT-------------------------KN 149

Query: 301 YNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFG 353
              KL DFG++   D   G + +      GT  + APE +           +RSDV+S G
Sbjct: 150 AEVKLVDFGVSAQLDSTLG-RRNTFI---GTPYWMAPEVIACDEQPDASYDARSDVWSLG 205

Query: 354 VVLLEMLTG 362
           +  +E+  G
Sbjct: 206 ITAIELADG 214

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 63.5 bits (154), Expect = 4e-11
 Identities = 82/301 (27%), Positives = 115/301 (38%), Gaps = 60/301 (19%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVN 187
           FR   +LG+GGFG V    +           TG   A K L    ++   G    L E  
Sbjct: 2   FRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGESMALNEKQ 52

Query: 188 FLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGA 245
            L + V+   V  + Y  E  D   LV   M  G L+ H++            +  A   
Sbjct: 53  IL-EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEI 111

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             GL  LH+E    ++YRD K  NILLD                            + ++
Sbjct: 112 CCGLEDLHQER---IVYRDLKPENILLD-------------------------DHGHIRI 143

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           SD GLA   PEG    +  RV GT GY APE V     T   D ++ G +L EM+ G+  
Sbjct: 144 SDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
             + +   +   VE             RL+   ++  +S K +  A  L    L +DPK 
Sbjct: 201 FQQRKKKIKREEVE-------------RLVK-EVQEEYSEKFSPDARSLCKMLLCKDPKE 246

Query: 426 R 426
           R
Sbjct: 247 R 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 63.1 bits (153), Expect = 4e-11
 Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 48/238 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAEVNFLGDLVH 194
           LGEG FG V +G + ++ +        L VAVKT+          +++L+E   + +  H
Sbjct: 7   LGEGEFGSVMEGQLNQDDSI-------LKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH 59

Query: 195 LNLVKLIGYCIEDDQR------LLVYEFMPRGSLENHLFRRSLP-----LPWSIRMKIAL 243
            N+++LIG C++  +       +++  FM  G L + L    L      LP  + +K   
Sbjct: 60  PNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMT 119

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+ +L   + +  I+RD         A R                 N ML ++ N 
Sbjct: 120 DIASGMEYL---SSKSFIHRDL--------AAR-----------------NCMLNENMNV 151

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            ++DFGL+K    GD             + A E +     T++SDV+SFGV + E+ T
Sbjct: 152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 51/235 (21%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVK----PGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFL 189
           +LG+G FG VF           V+    P  G   A+K L    L+         E + L
Sbjct: 3   VLGQGSFGKVFL----------VRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDIL 52

Query: 190 GDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
            ++ H  +VKL  Y  + + +L L+ +F+  G L   L +  +     ++  +A   A  
Sbjct: 53  AEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALA 110

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L  LH      +IYRD K  NILLD                          + + KL+DF
Sbjct: 111 LDHLHSLG---IIYRDLKPENILLDE-------------------------EGHIKLTDF 142

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-MTGHLTSRSDVYSFGVVLLEMLTG 362
           GL+K+  + +K   S    GT  Y APE V   GH  S +D +SFGV++ EMLTG
Sbjct: 143 GLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQS-ADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 63.1 bits (153), Expect = 5e-11
 Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 44/228 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V+K   +E         TG+  A K ++    +  ++++ E++ L    H N
Sbjct: 13  LGDGAFGKVYKAQNKE---------TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 63

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +VKL+     ++   ++ EF   G+++  +     PL       +     + L +LHE  
Sbjct: 64  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K  NIL                            D + KL+DFG++     
Sbjct: 124 ---IIHRDLKAGNILFTL-------------------------DGDIKLADFGVSAKNTR 155

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVVLLEM 359
             +   S   +GT  + APE VM      R     +DV+S G+ L+EM
Sbjct: 156 TIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 63.1 bits (153), Expect = 6e-11
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 48/230 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V+K   +E         TG   A K +     +  ++++ E+  L    H  
Sbjct: 20  LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYMVEIEILATCNHPY 70

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VKL+G    D +  ++ EF P G+++  +    R L  P  I++ I     + L +LH 
Sbjct: 71  IVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-QIQV-ICRQMLEALQYLH- 127

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                +I+RD K  N+LL                           D + KL+DFG++   
Sbjct: 128 --SMKIIHRDLKAGNVLLT-------------------------LDGDIKLADFGVSAKN 160

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEM 359
            +  +   S   +GT  + APE VM   +       ++D++S G+ L+EM
Sbjct: 161 VKTLQRRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 63.1 bits (153), Expect = 8e-11
 Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 51/245 (20%)

Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI      P      + VA+K L      + +KE L
Sbjct: 4   LKETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEIL 57

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-------ENHLFRRSLPLPWS 236
            E   +  + + ++ +L+G C+    +L + + MP G L       ++++  + L L W 
Sbjct: 58  DEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL-LNWC 115

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +++      AKG+ +L E   R +++RD    N+L+   +                    
Sbjct: 116 VQI------AKGMNYLEE---RRLVHRDLAARNVLVKTPQ-------------------- 146

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
                + K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV +
Sbjct: 147 -----HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 201

Query: 357 LEMLT 361
            E++T
Sbjct: 202 WELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 62.4 bits (151), Expect = 9e-11
 Identities = 75/308 (24%), Positives = 127/308 (41%), Gaps = 59/308 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
           +G+G FG VFKG   +N T  V       VA+K ++ +  +   E +  E+  L      
Sbjct: 12  IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 62

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + K  G  ++D +  ++ E++  GS  + L     PL  +    I     KGL +LH E
Sbjct: 63  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 120

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL       +G+                     KL+DFG+A  G 
Sbjct: 121 KK---IHRDIKAANVLL-----SEHGE--------------------VKLADFGVA--GQ 150

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +      S++D++S G+  +E+  G     +  P    
Sbjct: 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL 210

Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            L+    P             P LEG++S    +   +    CL+++P  RP   E+++ 
Sbjct: 211 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKH 253

Query: 436 LKPLPNLK 443
              +   K
Sbjct: 254 KFIVRFAK 261

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 62.0 bits (150), Expect = 1e-10
 Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 44/229 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           +G G FG VF G +  + T          VAVK+         K ++L E   L    H 
Sbjct: 3   IGRGNFGEVFSGRLRADNTP---------VAVKSCRETLPPDLKAKFLQEARILKQYSHP 53

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V+LIG C +     +V E +  G     L      L     +++   AA G+ +L  +
Sbjct: 54  NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK 113

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDG 314
                                         CI+  L   N L  + N  K+SDFG++++ 
Sbjct: 114 H-----------------------------CIHRDLAARNCLVTEKNVLKISDFGMSRE- 143

Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            E D  + ST  M      + APE +  G  +S SDV+SFG++L E  +
Sbjct: 144 -EEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 50/229 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
           +G G FG V+                   VA+K +++ G Q +++W   + EV FL  L 
Sbjct: 23  IGHGSFGAVYFARDVRTNE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR 73

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N ++  G  + +    LV E+   GS  + L     PL       I  GA +GLA+LH
Sbjct: 74  HPNTIEYKGCYLREHTAWLVMEYC-LGSASDILEVHKKPLQEVEIAAICHGALQGLAYLH 132

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                  I+RD K  NILL                          +    KL+DFG A  
Sbjct: 133 SHER---IHRDIKAGNILLT-------------------------EPGTVKLADFGSAS- 163

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
                    +   +GT  + APE ++    G    + DV+S G+  +E+
Sbjct: 164 -----LVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 61.5 bits (149), Expect = 2e-10
 Identities = 67/234 (28%), Positives = 91/234 (38%), Gaps = 50/234 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLV 193
           LG+GGFG        E     VK  TG   A K L+   L+   G K  L E   L  + 
Sbjct: 1   LGKGGFG--------EVCAVQVK-NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN 51

Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGL 249
              +V L  Y  E    L LV   M  G L+ H++    R L +   I     +    G+
Sbjct: 52  SPFIVNL-AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQI--TCGI 108

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             LH      ++YRD K  N+LLD                            N +LSD G
Sbjct: 109 LHLHSMD---IVYRDMKPENVLLD-------------------------DQGNCRLSDLG 140

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           LA +  +G      T+  GT GY APE +     +   D ++ G  + EM+ GR
Sbjct: 141 LAVELKDGKTI---TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 61.5 bits (149), Expect = 2e-10
 Identities = 57/239 (23%), Positives = 96/239 (40%), Gaps = 47/239 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
           +LG+G FG V +  ++         G+   VAVK L  D       +E+L E   + +  
Sbjct: 6   MLGKGEFGSVREAQLKSED------GSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD 59

Query: 194 HLNLVKLIGYCIED--DQRL----LVYEFMPRGSLENHLFRRSL-----PLPWSIRMKIA 242
           H N++KLIG  +      RL    ++  FM  G L   L    +      LP    ++  
Sbjct: 60  HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM 119

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A G+ +L   + +  I+RD    N +L+                         ++  
Sbjct: 120 IDIASGMEYL---SSKNFIHRDLAARNCMLN-------------------------ENMT 151

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             ++DFGL+K    GD             + A E +     T+ SDV++FGV + E++T
Sbjct: 152 VCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT 210

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 40/178 (22%)

Query: 208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT 267
           D   LV E++  G   + L +    LP     +       G+  LH+   R +I+RD K 
Sbjct: 70  DYLYLVMEYLNGGDCAS-LIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKP 125

Query: 268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM 327
            N+L+D                         Q  + KL+DFGL+++G        + + +
Sbjct: 126 ENLLID-------------------------QTGHLKLTDFGLSRNG------LENKKFV 154

Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-----NGEHNLVEW 380
           GT  Y APE ++       SD +S G V+ E L G        P     N     + W
Sbjct: 155 GTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 61/248 (24%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL 192
           E ++GEG FG V +  I+       K G  +  A+K L     +  H+++  E+  L  L
Sbjct: 7   EDVIGEGNFGQVIRAMIK-------KDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKL 59

Query: 193 -VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL---PWSIR---------- 238
             H N++ L+G C       +  E+ P G+L + L R+S  L   P   +          
Sbjct: 60  GHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFL-RKSRVLETDPAFAKEHGTASTLTS 118

Query: 239 ---MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              ++ A   A G+ +L   +E+  I+RD    N+L+                       
Sbjct: 119 QQLLQFASDVATGMQYL---SEKQFIHRDLAARNVLVG---------------------- 153

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG--YAAPEYVMTGHLTSRSDVYSFG 353
              ++  +K++DFGL++    G++ +V  + MG     + A E +     T++SDV+SFG
Sbjct: 154 ---ENLASKIADFGLSR----GEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFG 205

Query: 354 VVLLEMLT 361
           V+L E+++
Sbjct: 206 VLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 60.9 bits (148), Expect = 3e-10
 Identities = 85/332 (25%), Positives = 120/332 (36%), Gaps = 90/332 (27%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLV 193
           L+GEG +G V K   +E         TG  VA+K    + D     K  + E+  L  L 
Sbjct: 8   LVGEGSYGMVMKCKHKE---------TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR 58

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H NLV LI       +  LV+EF+    L + L +    L  S   K      +G+ F H
Sbjct: 59  HENLVNLIEVFRRKKRLYLVFEFVDHTVL-DDLEKYPNGLDESRVRKYLFQILRGIEFCH 117

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK- 312
                 +I+RD K  NIL+                          Q    KL DFG A+ 
Sbjct: 118 SHN---IIHRDIKPENILVS-------------------------QSGVVKLCDFGFART 149

Query: 313 -DGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTG------- 362
              P    T +V+TR      Y APE ++      R+ D+++ G ++ EMLTG       
Sbjct: 150 LAAPGEVYTDYVATR-----WYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204

Query: 363 --------------------RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH 402
                               +    KN       L E  +      +RF     P+L G 
Sbjct: 205 SDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPE-VKEIEPLEKRF-----PKLSG- 257

Query: 403 FSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                      LA  CL  DP  RP  S+++ 
Sbjct: 258 -------LVLDLAKQCLRIDPDDRPSSSQLLH 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 64/301 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   +  L H  
Sbjct: 12  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMKLSHEK 60

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     +V E+M  G L N+L         S  +++     +G+A+L    
Sbjct: 61  LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLES-- 118

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  I+RD    N L+D                              K+SDFGL++    
Sbjct: 119 -KQFIHRDLAARNCLVD-------------------------DQGCVKVSDFGLSR--YV 150

Query: 317 GDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPN 372
            D  + S+  +G+     ++ PE ++    +S+SDV++FGV++ E+ + G+   ++   N
Sbjct: 151 LDDEYTSS--VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN-N 207

Query: 373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV 432
            E   VE     + +  R YR   P L        ++K   +   C     + RP   ++
Sbjct: 208 SE--TVE----KVSQGLRLYR---PHL-------ASEKVYAIMYSCWHEKAEERPTFQQL 251

Query: 433 V 433
           +
Sbjct: 252 L 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 63/251 (25%)

Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWL 183
           L     +   +LG G FG V+KG WI      P      + VA+K L  +   + +KE L
Sbjct: 4   LKETELKKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEIL 57

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH-------LFRRSLPLPWS 236
            E   +  +    + +L+G C+    +L V + MP G L ++       +  + L L W 
Sbjct: 58  DEAYVMAGVGSPYVCRLLGICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDL-LNWC 115

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +++      AKG+++L E     +++RD    N+L   V++ N+                
Sbjct: 116 VQI------AKGMSYLEEVR---LVHRDLAARNVL---VKSPNH---------------- 147

Query: 297 LFQDYNAKLSDFGLAK----DGPE--GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                  K++DFGLA+    D  E   D   V  + M      A E ++    T +SDV+
Sbjct: 148 ------VKITDFGLARLLDIDETEYHADGGKVPIKWM------ALESILHRRFTHQSDVW 195

Query: 351 SFGVVLLEMLT 361
           S+GV + E++T
Sbjct: 196 SYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 61.2 bits (149), Expect = 3e-10
 Identities = 72/245 (29%), Positives = 97/245 (39%), Gaps = 61/245 (24%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH---------DGLQGHKE 181
           FR  ++LG G FG V          A  K  TG   A+K L           + L   K 
Sbjct: 1   FRCLAVLGRGHFGKVL--------LAEYKK-TGELYAIKALKKGDIIARDEVESLMCEKR 51

Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
                N      H  LV L   C + +  +  V E+   G L  H+       P   R  
Sbjct: 52  IFETAN---SERHPFLVNLFA-CFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEP---RAV 104

Query: 241 I-ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             A     GL +LHE     ++YRD K  N+LLD    E +                   
Sbjct: 105 FYAACVVLGLQYLHE---NKIVYRDLKLDNLLLD---TEGF------------------- 139

Query: 300 DYNAKLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLL 357
               K++DFGL K+G   GD+T  ST   GT  + APE V+T    +R+ D +  GV++ 
Sbjct: 140 ---VKIADFGLCKEGMGFGDRT--ST-FCGTPEFLAPE-VLTETSYTRAVDWWGLGVLIY 192

Query: 358 EMLTG 362
           EML G
Sbjct: 193 EMLVG 197

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 60/249 (24%)

Query: 131 FRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEWLAEVNF 188
                LL EG FG +F G  I+E      KPG    V VKT+ +H         L E   
Sbjct: 8   VTLSDLLQEGTFGRIFYGILIDE------KPGKEEEVFVKTVKDHASEIQVTLLLQESCL 61

Query: 189 LGDLVHLNLVKLIGYCIED-DQRLLVYEFMPRGSLENHLFRRSLPL-----PWSIRMK-- 240
           L  L H N++ ++  CIED +   ++Y +M  G+L+  LF +   L     P ++  +  
Sbjct: 62  LYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLK--LFLQQCRLGEANNPQALSTQQL 119

Query: 241 --IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
             +A+  A G+++LH+   R VI++D    N ++D                         
Sbjct: 120 VHMAIQIACGMSYLHK---RGVIHKDIAARNCVID------------------------- 151

Query: 299 QDYNAKLSDFGLAKD-GPE-----GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
           ++   K++D  L++D  P      GD  +   + M      A E ++    +S SDV+SF
Sbjct: 152 EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWM------ALESLVNKEYSSASDVWSF 205

Query: 353 GVVLLEMLT 361
           GV+L E++T
Sbjct: 206 GVLLWELMT 214

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 60/238 (25%), Positives = 90/238 (37%), Gaps = 49/238 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G     G +  +      V VK L           +L EV    +L H 
Sbjct: 3   IGNGWFGKVLLGEAH-RGMSKAR------VVVKELRASATPDEQLLFLQEVQPYRELNHP 55

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-----FRRSLPLPWSIRMKIALGAAKGLA 250
           N+++ +G CIE    LLV EF P G L+N+L         +     +  ++A   A GL 
Sbjct: 56  NVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQK-DVLQRMACEVASGLL 114

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH+      I+ D    N  L A                         D + K+ D+GL
Sbjct: 115 WLHQAD---FIHSDLALRNCQLTA-------------------------DLSVKIGDYGL 146

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYV-------MTGHLTSRSDVYSFGVVLLEMLT 361
           A +    D             + APE V       +    T +S+++S GV + E+ T
Sbjct: 147 ALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 62.1 bits (151), Expect = 4e-10
 Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 69/270 (25%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG----HKEWLAEVNFLGD 191
           L+G+GG G V+  +          P     VA+K +  D L       K +L E     D
Sbjct: 9   LIGKGGMGEVYLAY---------DPVCSRRVALKKIRED-LSENPLLKKRFLREAKIAAD 58

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMP--RGSLENHLFR-----RSLPLPWSIR------ 238
           L+H  +V +  Y I  D    VY  MP   G     L +      SL    + +      
Sbjct: 59  LIHPGIVPV--YSICSDGDP-VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAF 115

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           + I       + ++H    + V++RD K  NILL        G FG           ++ 
Sbjct: 116 LSIFHKICATIEYVHS---KGVLHRDLKPDNILL--------GLFG----------EVVI 154

Query: 299 QDYNAKLS-----DFGLAKDGPEGDKTH----VSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
            D+ A +      +  L  D  E +  +    +  +++GT  Y APE ++    +  +D+
Sbjct: 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDI 214

Query: 350 YSFGVVLLEMLT---------GRRSMDKNR 370
           Y+ GV+L +MLT         GR+   ++ 
Sbjct: 215 YALGVILYQMLTLSFPYRRKKGRKISYRDV 244

Length = 932

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 60.2 bits (146), Expect = 5e-10
 Identities = 68/237 (28%), Positives = 91/237 (38%), Gaps = 53/237 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLV 193
           LG+GGFG V          A     TG   A K LN   L   +G++  + E   L   V
Sbjct: 1   LGKGGFGEVS---------ACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAK-V 50

Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GL 249
           H   +  + Y  +    L LV   M  G L  H++      P     +     A+   GL
Sbjct: 51  HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGL 110

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             LH+   R +IYRD K  N+LLD                          D N ++SD G
Sbjct: 111 EHLHQ---RRIIYRDLKPENVLLD-------------------------NDGNVRISDLG 142

Query: 310 LA---KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           LA   KDG    K +      GT G+ APE +         D ++ GV L EM+  R
Sbjct: 143 LAVELKDGQSKTKGYA-----GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 60.6 bits (147), Expect = 5e-10
 Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 32/123 (26%)

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A GL FLH    + +IYRD K  N++LDA                         + + K+
Sbjct: 111 AIGLFFLHS---KGIIYRDLKLDNVMLDA-------------------------EGHIKI 142

Query: 306 SDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           +DFG+ K+   G KT   TR   GT  Y APE +         D ++FGV+L EML G+ 
Sbjct: 143 ADFGMCKENIFGGKT---TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 199

Query: 365 SMD 367
             D
Sbjct: 200 PFD 202

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 59.7 bits (144), Expect = 6e-10
 Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 60/241 (24%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV 193
           E  LG G FG V+     ++            VAVKT+   G    + +LAE N +  L 
Sbjct: 11  EKKLGAGQFGEVWMATYNKH----------TKVAVKTMK-PGSMSVEAFLAEANVMKTLQ 59

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLA 250
           H  LVKL    +  +   ++ EFM +GSL + L        PLP  I     +  A+G+A
Sbjct: 60  HDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMA 116

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           F+ +   R  I+RD + +NIL+ A                             K++DFGL
Sbjct: 117 FIEQ---RNYIHRDLRAANILVSASLV-------------------------CKIADFGL 148

Query: 311 AK-------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           A+          EG K  +         + APE +  G  T +SDV+SFG++L+E++T  
Sbjct: 149 ARVIEDNEYTAREGAKFPIK--------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200

Query: 364 R 364
           R
Sbjct: 201 R 201

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 59.8 bits (145), Expect = 6e-10
 Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 62/300 (20%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA---EVNFLGDL 192
           LG+G F  ++KG    ++    V PG  ++V +K L       H++ LA     + +  L
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLG----SDHRDSLAFFETASLMSQL 58

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H +LVKL G C+ D + ++V E++  G L+  L R    +    ++ +A   A  L +L
Sbjct: 59  SHKHLVKLYGVCVRD-ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYL 117

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
            ++    +++ +    NIL+                YGL    + F     KLSD G+  
Sbjct: 118 EDKK---LVHGNVCGKNILV--------------ARYGLNEGYVPF----IKLSDPGIPI 156

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
                 +     R+     + APE +  G   LT  +D +SFG  LLE+ +         
Sbjct: 157 --TVLSREERVERI----PWIAPECIRNGQASLTIAADKWSFGTTLLEICS--------- 201

Query: 371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA---HCLSRDPKARP 427
            NGE  L   +     E+ RFY+      + H         A+LA     C + DP  RP
Sbjct: 202 -NGEEPLSTLSS---SEKERFYQ------DQH--RLPMPDCAELANLINQCWTYDPTKRP 249

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 60.0 bits (145), Expect = 6e-10
 Identities = 81/306 (26%), Positives = 121/306 (39%), Gaps = 70/306 (22%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVN 187
           FR   +LG+GGFG V    +           TG   A K L    ++   G    L E  
Sbjct: 2   FRHYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGEAMALNEKR 52

Query: 188 FLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            L + V+   V  + Y  E  D   LV   M  G L+ H++  ++  P     +    AA
Sbjct: 53  IL-EKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY--NMGNPGFDEQRAIFYAA 109

Query: 247 K---GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           +   GL  L  E    ++YRD K  NILLD     + G                    + 
Sbjct: 110 ELCCGLEDLQRER---IVYRDLKPENILLD-----DRG--------------------HI 141

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           ++SD GLA   PEG+   V  RV GT GY APE +     T   D +  G ++ EM+ G+
Sbjct: 142 RISDLGLAVQIPEGET--VRGRV-GTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQ 198

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL---EGHFSIKGAQKAAQLAAHCLS 420
               K +       V+               +D R+   +  +S K ++ A  +    L+
Sbjct: 199 SPFRKRKER-----VKREE------------VDRRVKEDQEEYSEKFSEDAKSICRMLLT 241

Query: 421 RDPKAR 426
           ++PK R
Sbjct: 242 KNPKER 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 59.6 bits (145), Expect = 7e-10
 Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 58/234 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G +G V+K      G           VA+K +  +     +    E++ L +  H N
Sbjct: 11  IGSGTYGDVYKARDIATGE---------LVAIKVIKLEPGDDFEIIQQEISMLKECRHPN 61

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLEN--HLFRRSLPLPWSIRMKIAL---GAAKGLAF 251
           +V   G  +  D+  +V E+   GSL++   + R  L        +IA       KGLA+
Sbjct: 62  IVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSEL-----QIAYVCRETLKGLAY 116

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LHE      I+RD K +NILL                          +D + KL+DFG++
Sbjct: 117 LHE---TGKIHRDIKGANILLT-------------------------EDGDVKLADFGVS 148

Query: 312 KDGPEGDKTHVSTR---VMGTYGYAAPEYV---MTGHLTSRSDVYSFGVVLLEM 359
                   T    +    +GT  + APE       G    + D+++ G+  +E+
Sbjct: 149 -----AQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIEL 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 59.9 bits (146), Expect = 9e-10
 Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 80/258 (31%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNF 188
           +     +G G +G V            V   TG  VA+K +++  D L   K  L E+  
Sbjct: 2   YELLKPIGSGAYGVVCSA---------VDKRTGRKVAIKKISNVFDDLIDAKRILREIKL 52

Query: 189 LGDLVHLNLVKLIGYCIEDDQRL------LVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L  L H N++ L+   +            +V E M     E  L +        I+    
Sbjct: 53  LRHLRHENIIGLLDI-LRPPSPEDFNDVYIVTELM-----ETDLHK-------VIKSPQP 99

Query: 243 LGAA----------KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           L             +GL +LH      VI+RD K SNIL+++                  
Sbjct: 100 LTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNS------------------ 138

Query: 293 FNNMLFQDYNAKLSDFGLAK-DGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSR 346
            N  L      K+ DFGLA+   P+ D+      +V TR      Y APE +++    ++
Sbjct: 139 -NCDL------KICDFGLARGVDPDEDEKGFLTEYVVTRW-----YRAPELLLSSSRYTK 186

Query: 347 S-DVYSFGVVLLEMLTGR 363
           + D++S G +  E+LT +
Sbjct: 187 AIDIWSVGCIFAELLTRK 204

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 72/233 (30%), Positives = 95/233 (40%), Gaps = 50/233 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVN-FLGDL 192
           +G+G FG V     +           G   AVK L    +   KE    +AE N  L ++
Sbjct: 3   IGKGSFGKVLLAKHKA---------DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV 53

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMKI-ALGAAKGL 249
            H  LV L  Y  +   +L  V +++  G L  HL R RS P P   R +  A   A  L
Sbjct: 54  KHPFLVGL-HYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEP---RARFYAAEIASAL 109

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH      +IYRD K  NILLD+                           +  L+DFG
Sbjct: 110 GYLHS---LNIIYRDLKPENILLDS-------------------------QGHVVLTDFG 141

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           L K+G E  KT  ++   GT  Y APE +         D +  G VL EML G
Sbjct: 142 LCKEGIEHSKT--TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 59.7 bits (144), Expect = 1e-09
 Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 42/240 (17%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWL 183
           +L   +F   S LG G  G VFK           KP +GL +A K ++ +       + +
Sbjct: 1   ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLIMARKLIHLEIKPAIRNQII 51

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E+  L +     +V   G    D +  +  E M  GSL+  + +++  +P  I  K+++
Sbjct: 52  RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI 110

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              KGL +L E+ +  +++RD K SNIL+++ R E                         
Sbjct: 111 AVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------I 143

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           KL DFG++  G   D   ++   +GT  Y +PE +   H + +SD++S G+ L+EM  GR
Sbjct: 144 KLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 59.0 bits (143), Expect = 1e-09
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 30/116 (25%)

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL FLH+   + +IYRD K  N+LLD                         +D + K++D
Sbjct: 108 GLQFLHK---KGIIYRDLKLDNVLLD-------------------------KDGHIKIAD 139

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           FG+ K+   G+    ++   GT  Y APE +         D +SFGV+L EML G+
Sbjct: 140 FGMCKENMNGEGK--ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 42/226 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           LG G FG V KG  +   +         TVAVK L +D        E L E N +  L +
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEK-------TVAVKILKNDNNDPALKDELLREANVMQQLDN 55

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
             +V++IG C E +  +LV E    G L   L +       +I  ++    + G+ +L E
Sbjct: 56  PYIVRMIGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNI-TELVHQVSMGMKYLEE 113

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                 ++RD    N+LL                        + Q Y AK+SDFGL+K  
Sbjct: 114 TN---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-A 144

Query: 315 PEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
              D+ +   +  G +   + APE +     +S+SDV+SFGV++ E
Sbjct: 145 LGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 64/303 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LG G  G V+K +            T   +AVK +  D  ++  K+ ++E+  L      
Sbjct: 9   LGHGNGGTVYKAYH---------LLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSP 59

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            ++   G    +++  +  EFM  GSL+  ++R+   +P  +  +IA+   KGL +L   
Sbjct: 60  YIIGFYGAFFVENRISICTEFMDGGSLD--VYRK---IPEHVLGRIAVAVVKGLTYLWS- 113

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               +++RD K SN+L++  R +                         KL DFG++    
Sbjct: 114 --LKILHRDVKPSNMLVNT-RGQ------------------------VKLCDFGVSTQLV 146

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
                 ++   +GT  Y APE +        SDV+S G+  +E+  GR    + + N   
Sbjct: 147 NS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKN--- 199

Query: 376 NLVEWARPHLGERRRFYRLID---PRL-EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE 431
                 +  L   +    ++D   P L  G FS    +K       C+ + PK RP    
Sbjct: 200 ------QGSLMPLQLLQCIVDEDPPVLPVGQFS----EKFVHFITQCMRKQPKERPAPEN 249

Query: 432 VVE 434
           +++
Sbjct: 250 LMD 252

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 57/232 (24%)

Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFR-RSLPLP----WSIRMKIALGAAKGLAFLHEEAE 257
           C + + RL  V E++  G L  H+ R R LP      +S  + +AL       +LHE   
Sbjct: 64  CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN------YLHE--- 114

Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE- 316
           R +IYRD K  N+LLD+                         + + KL+D+G+ K+G   
Sbjct: 115 RGIIYRDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRP 149

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGE 374
           GD T   +   GT  Y APE +         D ++ GV++ EM+ GR   D   +  N +
Sbjct: 150 GDTT---STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 206

Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
            N  ++    + E++        R+    S+    KAA +    L++DPK R
Sbjct: 207 QNTEDYLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 247

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 62/249 (24%)

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL--PWSIRMKIALGAAKGLAF 251
           H ++V L G C+ D + ++V EF+  G L+  + R+S  L  PW  + K+A   A  L++
Sbjct: 63  HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPW--KFKVAKQLASALSY 120

Query: 252 LHEEAERPVIYRDFKTSNILL--DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
           L    ++ +++ +  T NILL  + +  E  G F                    KLSD G
Sbjct: 121 LE---DKDLVHGNVCTKNILLAREGIDGE-CGPF-------------------IKLSDPG 157

Query: 310 LAKDGPEGDKTHVSTR--VMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           +           V +R   +    + APE V  + +L+  +D +SFG  L E+       
Sbjct: 158 IP--------ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICY----- 204

Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRDPK 424
                NGE  L +     L E+ RFY       EG   +     ++ A L  HC++ DP 
Sbjct: 205 -----NGEIPLKD---KTLAEKERFY-------EGQCMLVTPSCKELADLMTHCMNYDPN 249

Query: 425 ARPLMSEVV 433
            RP    ++
Sbjct: 250 QRPFFRAIM 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 61/246 (24%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVH 194
           ++GEG FG V K  I+       K G  +  A+K +     +  H+++  E+  L  L H
Sbjct: 2   VIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 54

Query: 195 L-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL---PWSIR------------ 238
             N++ L+G C       L  E+ P G+L + L R+S  L   P                
Sbjct: 55  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQ 113

Query: 239 -MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +  A   A+G+ +L   +++  I+RD    NIL+     ENY                 
Sbjct: 114 LLHFAADVARGMDYL---SQKQFIHRDLAARNILV----GENYV---------------- 150

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG--YAAPEYVMTGHLTSRSDVYSFGVV 355
                AK++DFGL++    G + +V  + MG     + A E +     T+ SDV+S+GV+
Sbjct: 151 -----AKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 200

Query: 356 LLEMLT 361
           L E+++
Sbjct: 201 LWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 58/257 (22%)

Query: 117 RKFTFNDLKLATRNFR--PESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
           R  +  D ++A   F+  PE L      +G G FG V+  +  +  T  V       VA+
Sbjct: 5   RAGSLKDPEIAELFFKEDPEKLFTDLREIGHGSFGAVY--FARDVRTNEV-------VAI 55

Query: 169 KTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 225
           K +++ G Q +++W   + EV FL  + H N ++  G  + +    LV E+   GS  + 
Sbjct: 56  KKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC-LGSASDL 114

Query: 226 LFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
           L     PL       I  GA +GLA+LH      +I+RD K  NILL             
Sbjct: 115 LEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLT------------ 159

Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GH 342
                        +    KL+DFG A      +        +GT  + APE ++    G 
Sbjct: 160 -------------EPGQVKLADFGSASIASPANS------FVGTPYWMAPEVILAMDEGQ 200

Query: 343 LTSRSDVYSFGVVLLEM 359
              + DV+S G+  +E+
Sbjct: 201 YDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 67/223 (30%)

Query: 225 HLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
            ++ + L +P  I  KIA+   K L +LH +    VI+RD K SN+L++       G+  
Sbjct: 92  KVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINR-----NGQV- 143

Query: 285 FCIYYGLFFNNMLFQDYNAKLSDFG--------LAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                              KL DFG        +AK    G K            Y APE
Sbjct: 144 -------------------KLCDFGISGYLVDSVAKTIDAGCKP-----------YMAPE 173

Query: 337 YV----MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFY 392
            +           +SDV+S G+ ++E+ TGR   D            W  P   + ++  
Sbjct: 174 RINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS-----------WKTP-FQQLKQVV 221

Query: 393 RLIDPRL-EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
               P+L    FS     +       CL ++ K RP   E+++
Sbjct: 222 EEPSPQLPAEKFSP----EFQDFVNKCLKKNYKERPNYPELLQ 260

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 55/245 (22%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL 192
           + ++GEG FG V K  I+       K G  +  A+K +     +  H+++  E+  L  L
Sbjct: 12  QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 64

Query: 193 -VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA------LGA 245
             H N++ L+G C       L  E+ P G+L + L R+S  L       IA      L +
Sbjct: 65  GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSS 123

Query: 246 AKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
            + L F  + A       ++  I+RD    NIL+                          
Sbjct: 124 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG------------------------- 158

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG--YAAPEYVMTGHLTSRSDVYSFGVVL 356
           ++Y AK++DFGL++    G + +V  + MG     + A E +     T+ SDV+S+GV+L
Sbjct: 159 ENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213

Query: 357 LEMLT 361
            E+++
Sbjct: 214 WEIVS 218

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 44/241 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA---EV 186
           N+R   LLG+G FG V+  +        V  G  L       + +  +  KE  A   E+
Sbjct: 3   NWRRGKLLGQGAFGRVYLCY-------DVDTGRELAAKQVQFDPESPETSKEVSALECEI 55

Query: 187 NFLGDLVHLNLVKLIGYCIED--DQRLLVY-EFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
             L +L H  +V+  G C+ D  ++ L ++ E+MP GS+++ L +    L  S+  K   
Sbjct: 56  QLLKNLQHERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQL-KAYGALTESVTRKYTR 113

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              +G+++LH      +++RD K +NIL D+                           N 
Sbjct: 114 QILEGMSYLHSNM---IVHRDIKGANILRDSAG-------------------------NV 145

Query: 304 KLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           KL DFG +K       +    R V GT  + +PE +       ++DV+S G  ++EMLT 
Sbjct: 146 KLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTE 205

Query: 363 R 363
           +
Sbjct: 206 K 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 56/247 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLA--- 184
           N+R   LLG+G FG V+  +  +         TG  +AVK +  + +  +  KE  A   
Sbjct: 3   NWRLGKLLGQGAFGRVYLCYDAD---------TGRELAVKQVQFDPESPETSKEVNALEC 53

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           E+  L +L+H  +V+  G   +  +R L    E MP GS+++ L +    L  ++  K  
Sbjct: 54  EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQL-KSYGALTENVTRKYT 112

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               +G+++LH      +++RD K +NIL D+V                          N
Sbjct: 113 RQILEGVSYLHSNM---IVHRDIKGANILRDSVG-------------------------N 144

Query: 303 AKLSDFGLAKD------GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
            KL DFG +K          G K+     V GT  + +PE +       ++D++S G  +
Sbjct: 145 VKLGDFGASKRLQTICLSGTGMKS-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199

Query: 357 LEMLTGR 363
           +EMLT +
Sbjct: 200 VEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 57/242 (23%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVN 187
           + +     +G+G  G V+        TA +   TG  VA+K +N    Q  KE +  E+ 
Sbjct: 19  KKYTRFEKIGQGASGTVY--------TA-IDVATGQEVAIKQMNLQQ-QPKKELIINEIL 68

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA- 246
            + +  H N+V  +   +  D+  +V E++  GSL + +            M     AA 
Sbjct: 69  VMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--------MDEGQIAAV 120

Query: 247 -----KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                + L FLH      VI+RD K+ NILL                 G+        D 
Sbjct: 121 CRECLQALEFLHS---NQVIHRDIKSDNILL-----------------GM--------DG 152

Query: 302 NAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           + KL+DFG  A+  PE  K    + ++GT  + APE V       + D++S G++ +EM+
Sbjct: 153 SVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209

Query: 361 TG 362
            G
Sbjct: 210 EG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 53/245 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K   +          TG  VA+K +  D    G+      + E
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKL---------TGEVVALKKIRLDTETEGVPSTA--IRE 49

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIA 242
           ++ L +L H N+VKL+     +++  LV+EF+     +   F  + P   +P  +     
Sbjct: 50  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---HQDLKKFMDASPLSGIPLPLIKSYL 106

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               +GLAF H  + R V++RD K  N+L++                          +  
Sbjct: 107 FQLLQGLAFCH--SHR-VLHRDLKPQNLLINT-------------------------EGA 138

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLT 361
            KL+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T
Sbjct: 139 IKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 196

Query: 362 GRRSM 366
            RR++
Sbjct: 197 -RRAL 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 50/236 (21%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG+G +G V+         A     T + +A+K +     +  +    E+     L H 
Sbjct: 15  VLGKGTYGIVY---------AARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHR 65

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA--KGLAFLH 253
           N+V+ +G   E+    +  E +P GSL   L  +  PL  + +  I       +GL +LH
Sbjct: 66  NIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH 125

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG---- 309
           +     +++RD K  N+L++              Y G+            K+SDFG    
Sbjct: 126 DNQ---IVHRDIKGDNVLVNT-------------YSGV-----------VKISDFGTSKR 158

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTGR 363
           LA   P       +    GT  Y APE +  G     + +D++S G  ++EM TG+
Sbjct: 159 LAGINP------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 67/246 (27%), Positives = 97/246 (39%), Gaps = 72/246 (29%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG+G FG VF         A +K GT    A+K L  D           V  + D V  
Sbjct: 2   MLGKGSFGKVF--------LAELK-GTNQFFAIKALKKD-----------VVLMDDDVEC 41

Query: 196 NLV--KLIG-----------YCI--EDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSI 237
            +V  +++            YC     +    V E++  G L  H+    +  LP     
Sbjct: 42  TMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFY 101

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
             +I  G    L FLH +    ++YRD K  NILLD                        
Sbjct: 102 AAEIICG----LQFLHSKG---IVYRDLKLDNILLD------------------------ 130

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
             D + K++DFG+ K+   GD    +    GT  Y APE ++     +  D +SFGV+L 
Sbjct: 131 -TDGHIKIADFGMCKENMLGDAK--TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLY 187

Query: 358 EMLTGR 363
           EML G+
Sbjct: 188 EMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 57.9 bits (140), Expect = 3e-09
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 45/263 (17%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    I+ +     K  +  TVAVK L        +K  + E+  L  +  H
Sbjct: 15  LGRGAFGKV----IQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH 70

Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR------MKIALGAA 246
           LN+V L+G C +    L+V  E+   G+L N+L  +R    P+  +      MK   G  
Sbjct: 71  LNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKK 130

Query: 247 --------------------KGLAFLHEEAERPVIYRDFKTSNILL----DAVRAENYGK 282
                               K L+ + E+ E   +Y++  T   L+       R   +  
Sbjct: 131 QRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA 190

Query: 283 FGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHV---STRVMGTYGYAAPEYV 338
              CI+  L   N+L  + N  K+ DFGLA+D  + D  +V     R+     + APE +
Sbjct: 191 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYK-DPDYVRKGDARL--PLKWMAPESI 247

Query: 339 MTGHLTSRSDVYSFGVVLLEMLT 361
                T++SDV+SFGV+L E+ +
Sbjct: 248 FDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 42/240 (17%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWL 183
           +L   +F   S LG G  G V K           KP +GL +A K ++ +       + +
Sbjct: 1   ELKDDDFERISELGAGNGGVVTK--------VQHKP-SGLIMARKLIHLEIKPAIRNQII 51

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E+  L +     +V   G    D +  +  E M  GSL+  + + +  +P  I  K+++
Sbjct: 52  RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSI 110

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              +GLA+L E+ +  +++RD K SNIL+++ R E                         
Sbjct: 111 AVLRGLAYLREKHQ--IMHRDVKPSNILVNS-RGE------------------------I 143

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           KL DFG++  G   D   ++   +GT  Y +PE +   H + +SD++S G+ L+E+  GR
Sbjct: 144 KLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 57.5 bits (139), Expect = 4e-09
 Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 39/166 (23%)

Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI 261
           Y  + D +L L+ +++  G L  HL++R       +R+ IA      L  LH+     +I
Sbjct: 72  YAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIA-EIVLALDHLHQ---LGII 127

Query: 262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD--GPEGDK 319
           YRD K  NILLD                          + +  L+DFGL+K+    E ++
Sbjct: 128 YRDIKLENILLD-------------------------SEGHVVLTDFGLSKEFLAEEEER 162

Query: 320 THVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLTG 362
            +      GT  Y APE +     GH     D +S GV+  E+LTG
Sbjct: 163 AY---SFCGTIEYMAPEVIRGGSGGH-DKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 57.4 bits (138), Expect = 4e-09
 Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 59/299 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
           +G+G FG V+KG   +N T  V       VA+K ++ +  +   E +  E+  L      
Sbjct: 12  IGKGSFGEVYKGI--DNRTKEV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 62

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + +  G  ++  +  ++ E++  GS  + L  +  PL  +    I     KGL +LH E
Sbjct: 63  YITRYYGSYLKGTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE 120

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL                          +  + KL+DFG+A  G 
Sbjct: 121 RK---IHRDIKAANVLLS-------------------------EQGDVKLADFGVA--GQ 150

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +       ++D++S G+  +E+  G        P    
Sbjct: 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL 210

Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            L+    P             P LEG +S    +   +    CL++DP+ RP   E+++
Sbjct: 211 FLIPKNSP-------------PTLEGQYS----KPFKEFVEACLNKDPRFRPTAKELLK 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 72/239 (30%), Positives = 100/239 (41%), Gaps = 48/239 (20%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           FR   +LG+GGFG V          A     TG   A K L    ++  K     +N   
Sbjct: 2   FRHYRVLGKGGFGEV---------CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 52

Query: 191 DLVHLN--LVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            L  +N   V  + Y  E  D   LV   M  G L+ H++  ++  P     +    AA+
Sbjct: 53  ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY--NMGNPGFDEERAVFYAAE 110

Query: 248 ---GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
              GL  LH E    ++YRD K  NILLD     +YG                    + +
Sbjct: 111 ITCGLEDLHRER---IVYRDLKPENILLD-----DYG--------------------HIR 142

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           +SD GLA + PEG+   +  RV GT GY APE V     T   D +  G ++ EM+ G+
Sbjct: 143 ISDLGLAVEIPEGET--IRGRV-GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 75/309 (24%), Positives = 123/309 (39%), Gaps = 65/309 (21%)

Query: 133 PESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-E 185
           PE L      +G+G FG VFKG   +N T  V       VA+K ++ +  +   E +  E
Sbjct: 2   PEELFTKLERIGKGSFGEVFKGI--DNRTQQV-------VAIKIIDLEEAEDEIEDIQQE 52

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           +  L       + K  G  ++  +  ++ E++  GS  + L  R+ P        +    
Sbjct: 53  ITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEI 110

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KGL +LH E +   I+RD K +N+LL                          +  + KL
Sbjct: 111 LKGLDYLHSEKK---IHRDIKAANVLLS-------------------------EQGDVKL 142

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFG+A  G   D        +GT  + APE +      S++D++S G+  +E+  G   
Sbjct: 143 ADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 200

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                P     L+    P             P L G FS    +   +    CL++DP  
Sbjct: 201 NSDMHPMRVLFLIPKNNP-------------PTLTGEFS----KPFKEFIDACLNKDPSF 243

Query: 426 RPLMSEVVE 434
           RP   E+++
Sbjct: 244 RPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 56.7 bits (137), Expect = 6e-09
 Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 55/237 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-----EVNFLGD 191
           +GEG +G V+KG             TG  VA+K +    L+  +E +      E++ L +
Sbjct: 8   IGEGTYGVVYKG---------RNKKTGQIVAMKKIR---LESEEEGVPSTAIREISLLKE 55

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI---RMKIAL-GAAK 247
           L H N+V L    +++ +  L++EF+    L+ +L   SLP    +    +K  L    +
Sbjct: 56  LQHPNIVCLQDVLMQESRLYLIFEFLSM-DLKKYL--DSLPKGQYMDAELVKSYLYQILQ 112

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+ F H    R V++RD K  N+L+D     N G     I                KL+D
Sbjct: 113 GILFCH---SRRVLHRDLKPQNLLID-----NKG----VI----------------KLAD 144

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           FGLA+    G    V T  + T  Y APE ++     S   D++S G +  EM T +
Sbjct: 145 FGLAR--AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 56.6 bits (136), Expect = 9e-09
 Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 56/239 (23%)

Query: 133 PESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---L 183
           PE L      +G G FG V+      N            VA+K +++ G Q +++W   +
Sbjct: 13  PEKLFSDLREIGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDII 63

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            EV FL  L H N ++  G  + +    LV E+   GS  + L     PL       +  
Sbjct: 64  KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTH 122

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           GA +GLA+LH      +I+RD K  NILL                          +    
Sbjct: 123 GALQGLAYLHSHN---MIHRDVKAGNILLS-------------------------EPGLV 154

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
           KL DFG A           +   +GT  + APE ++    G    + DV+S G+  +E+
Sbjct: 155 KLGDFGSAS------IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 74/260 (28%), Positives = 104/260 (40%), Gaps = 68/260 (26%)

Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK--TLNHDGL 176
           FT  DLK           +G G FG V K   + +GT          +AVK      D  
Sbjct: 1   FTAEDLK-------DLGEIGRGAFGTVNKMLHKPSGT---------IMAVKRIRSTVDEK 44

Query: 177 QGHKEWLAEVNFLGDLVH-----LNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-----HL 226
           +  K  L ++    D+V        +VK  G    +    +  E M   SL+      + 
Sbjct: 45  E-QKRLLMDL----DVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYE 98

Query: 227 FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
             +S+ +P  I  KIA+   K L +L EE +  +I+RD K SNILLD             
Sbjct: 99  VLKSV-IPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLD------------- 142

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS- 345
                       ++ N KL DFG++  G   D     TR  G   Y APE +        
Sbjct: 143 ------------RNGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAPERIDPSARDGY 187

Query: 346 --RSDVYSFGVVLLEMLTGR 363
             RSDV+S G+ L E+ TG+
Sbjct: 188 DVRSDVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 67/322 (20%), Positives = 121/322 (37%), Gaps = 71/322 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGW-IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           NF+ E  +G G F  V++   + +     +K        V+       +  ++ + E++ 
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALK-------KVQIFEMMDAKARQDCVKEIDL 55

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLFRRSLPLPWSIRMKIALGA 245
           L  L H N++K +   IED++  +V E    G L     +  ++   +P     K  +  
Sbjct: 56  LKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              +  +H    R V++RD K +N+ + A      G  G     G FF++          
Sbjct: 116 CSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGL----GRFFSS---------- 158

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
                        KT  +  ++GT  Y +PE +       +SD++S G +L EM      
Sbjct: 159 -------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM------ 199

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID-------PRLEG-HFSIKGAQKAAQLAAH 417
                            P  G++   + L         P L   H+S    +K  +L + 
Sbjct: 200 ------------AALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYS----EKLRELVSM 243

Query: 418 CLSRDPKARPLMSEVVEALKPL 439
           C+  DP  RP +  V +  K +
Sbjct: 244 CIYPDPDQRPDIGYVHQIAKQM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 30/115 (26%)

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L FLH      VIYRD K  NILLDA         G C                 KL+DF
Sbjct: 109 LMFLHRHG---VIYRDLKLDNILLDAE--------GHC-----------------KLADF 140

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           G+ K+G     T  +T   GT  Y APE +         D ++ GV++ EM+ G+
Sbjct: 141 GMCKEGILNGVT--TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 75/288 (26%)

Query: 84  PAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFG 143
           P+++  SS+++S + S  S +K   EL+   R+ +                  +G G  G
Sbjct: 50  PSSSSSSSSSSSASGSAPSAAKSLSELE---RVNR------------------IGSGAGG 88

Query: 144 CVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLVHLNLVKLI 201
            V+K          +   TG   A+K +  NH+     ++   E+  L D+ H N+VK  
Sbjct: 89  TVYK---------VIHRPTGRLYALKVIYGNHED-TVRRQICREIEILRDVNHPNVVKCH 138

Query: 202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI 261
                + +  ++ EFM  GSLE         L       +A     G+A+LH    R ++
Sbjct: 139 DMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLA-----DVARQILSGIAYLHR---RHIV 190

Query: 262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG-DKT 320
           +RD K SN+L+++ +                         N K++DFG+++   +  D  
Sbjct: 191 HRDIKPSNLLINSAK-------------------------NVKIADFGVSRILAQTMDPC 225

Query: 321 HVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVVLLEMLTGR 363
           + S   +GT  Y +PE + T            D++S GV +LE   GR
Sbjct: 226 NSS---VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGR 270

Length = 353

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 96/388 (24%), Positives = 144/388 (37%), Gaps = 93/388 (23%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDL 192
           LLG+G FG V    ++E  T       G   A+K L  + +    E    L E   L + 
Sbjct: 2   LLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 52

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA--AKGL 249
            H  L  L  Y  +   RL  V E+   G L  HL R  +   +S       GA     L
Sbjct: 53  RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSAL 108

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH  +E+ V+YRD K  N++LD                         +D + K++DFG
Sbjct: 109 DYLH--SEKNVVYRDLKLENLMLD-------------------------KDGHIKITDFG 141

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           L K+G +   T  +    GT  Y APE +         D +  GVV+ EM+ GR      
Sbjct: 142 LCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK----- 424
                  L+      L E  RF R + P            +A  L +  L +DPK     
Sbjct: 200 DHEKLFELI------LMEEIRFPRTLSP------------EAKSLLSGLLKKDPKQRLGG 241

Query: 425 ----ARPLMS---------EVVEALKPLPNLKDMASSS----YYFQTMQAERIGSSPNTR 467
               A+ +M          + V   K +P  K   +S     Y+ +   A+ I  +P  +
Sbjct: 242 GPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITPPDQ 301

Query: 468 NGIRAQGGSLSRNGQRSLSIPNGSYASP 495
           +       +     +R    P  SY++ 
Sbjct: 302 DDSMETVDN-----ERRPHFPQFSYSAS 324

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 55/252 (21%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G GGFG V+            K  TG   A+K L+   ++  +    E   L + + L
Sbjct: 1   IIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNERIML 48

Query: 196 NLVKL--------IGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           +LV          + Y      +L  + + M  G L  HL +  +     +R   A    
Sbjct: 49  SLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRF-YATEII 107

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            GL  +H    R V+YRD K +NILLD                         +  + ++S
Sbjct: 108 LGLEHMHN---RFVVYRDLKPANILLD-------------------------EHGHVRIS 139

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS 365
           D GLA D  +  K H S   +GT+GY APE +  G    S +D +S G +L ++L G   
Sbjct: 140 DLGLACDFSK-KKPHAS---VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195

Query: 366 MDKNRPNGEHNL 377
             +++   +H +
Sbjct: 196 FRQHKTKDKHEI 207

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 72/281 (25%), Positives = 99/281 (35%), Gaps = 83/281 (29%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN-------FL 189
           +G+GG+G VF            K  TG  VA+K +    L      L EV         L
Sbjct: 9   VGQGGYGQVF---------LAKKKDTGEIVALKRMKKSLLF----KLNEVRHVLTERDIL 55

Query: 190 GDLVHLNLVKLIGYCIEDDQRL-LVYEFMP----------RGSLENHLFRRSLPLPWSIR 238
                  LVKL+ Y  +DD+ L L  E++P           G L     R  +       
Sbjct: 56  TTTKSEWLVKLL-YAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYM-----AE 109

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           M  A+ A   L ++H         RD K  N L+D                         
Sbjct: 110 MFEAVDALHELGYIH---------RDLKPENFLID------------------------- 135

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLL 357
              + KL+DFGL+K          +  V+G+  Y APE V+ G     + D +S G +L 
Sbjct: 136 ASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPE-VLRGKGYDFTVDYWSLGCMLY 189

Query: 358 EMLTGRRSMDKNRPNGEH-NLVEWA----RPHLGERRRFYR 393
           E L G      + PN    NL  W     RP   + R    
Sbjct: 190 EFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLS 230

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 42/229 (18%)

Query: 159 KPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
           KPG    V +K     G +G    L E   L ++ H +++++    +      +V   +P
Sbjct: 87  KPGQPDPVVLKI----GQKGTT--LIEAMLLQNVNHPSVIRMKDTLVSGAITCMV---LP 137

Query: 219 --RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
                L  +L +RS PLP    + I     +GL +LH  A+R +I+RD KT NI ++ V 
Sbjct: 138 HYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH--AQR-IIHRDVKTENIFINDVD 194

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
               G  G              Q      +  GLA                GT    APE
Sbjct: 195 QVCIGDLGAA------------QFPVVAPAFLGLA----------------GTVETNAPE 226

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 385
            +      S++D++S G+VL EML    ++ ++ P+     V+    HL
Sbjct: 227 VLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHL 275

Length = 357

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 30/116 (25%)

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL FLH +    +IYRD K  N++LD                         +D + K++D
Sbjct: 108 GLQFLHSKG---IIYRDLKLDNVMLD-------------------------RDGHIKIAD 139

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           FG+ K+   GD    ++   GT  Y APE +     T   D +SFGV+L EML G+
Sbjct: 140 FGMCKENVFGDNR--ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.9 bits (133), Expect = 3e-08
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 61/242 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-----EVNFLGD 191
           LG+G +G V+K          +   T   VA+K +  D  +   +  A     E+ FL +
Sbjct: 15  LGKGAYGIVWKA---------IDRRTKEVVALKKI-FDAFRNATD--AQRTFREIMFLQE 62

Query: 192 LV-HLNLVKLIG-YCIEDDQRL-LVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
           L  H N+VKL+     E+D+ + LV+E+M     E  L    R ++      R  I    
Sbjct: 63  LGDHPNIVKLLNVIKAENDKDIYLVFEYM-----ETDLHAVIRANILEDVHKRY-IMYQL 116

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            K L ++H      VI+RD K SNILL++                         D   KL
Sbjct: 117 LKALKYIHS---GNVIHRDLKPSNILLNS-------------------------DCRVKL 148

Query: 306 SDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLT 361
           +DFGLA+   +  E  +  V T  + T  Y APE ++     ++  D++S G +L EML 
Sbjct: 149 ADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL 208

Query: 362 GR 363
           G+
Sbjct: 209 GK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 54.6 bits (131), Expect = 3e-08
 Identities = 78/302 (25%), Positives = 118/302 (39%), Gaps = 72/302 (23%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVH 194
           ++G GGFG V+            K  TG   A+K L+   ++  + E LA    L + + 
Sbjct: 1   IIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLA----LNERIM 47

Query: 195 LNLVKL--------IGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           L+LV          + Y      +L  + + M  G L  HL +  +     +R   A   
Sbjct: 48  LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRF-YAAEI 106

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             GL  +H    R V+YRD K +NILLD        + G                 + ++
Sbjct: 107 ILGLEHMHN---RFVVYRDLKPANILLD--------EHG-----------------HVRI 138

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR 364
           SD GLA D  +  K H S   +GT+GY APE +  G    S +D +S G +L ++L G  
Sbjct: 139 SDLGLACDFSK-KKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 194

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
              +++   +H           E  R    +   L   FS     +   L    L RD  
Sbjct: 195 PFRQHKTKDKH-----------EIDRMTLTMAVELPDSFS----PELRSLLEGLLQRDVN 239

Query: 425 AR 426
            R
Sbjct: 240 RR 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 33/170 (19%)

Query: 194 HLNLVKLIGYCIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
           H  L +L   C +   RL  V EF+  G L  H+ ++S     +     A      L FL
Sbjct: 55  HPFLTQLY-CCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEITSALMFL 112

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H+   + +IYRD K  N+LLD                          + + KL+DFG+ K
Sbjct: 113 HD---KGIIYRDLKLDNVLLD-------------------------HEGHCKLADFGMCK 144

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           +G    KT  ++   GT  Y APE +         D ++ GV+L EML G
Sbjct: 145 EGIFNGKT--TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 73/308 (23%), Positives = 120/308 (38%), Gaps = 76/308 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V          A VK  +G  VAVK ++    Q  +    EV  + D  H N
Sbjct: 28  IGEGSTGIVC--------IATVK-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L +        +    RM       + L   K L+
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLKALS 130

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 131 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 162

Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 163 CAQVSKEVPR------RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216

Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  + +    + P L+G                 L RDP  R
Sbjct: 217 FNEPPLKAMKMI---RDNLPPKLKNLHKVSPSLKGFLD------------RLLVRDPAQR 261

Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 262 ATAAELLK 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 85/300 (28%), Positives = 113/300 (37%), Gaps = 73/300 (24%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDL 192
           LLG+G FG V    + E  T       G   A+K L  + +    E    + E   L + 
Sbjct: 2   LLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 52

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA--AKGL 249
            H  L  L  Y  +   RL  V E+   G L  HL R  +      R     GA     L
Sbjct: 53  RHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF---YGAEIVSAL 108

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH    R V+YRD K  N++LD                         +D + K++DFG
Sbjct: 109 EYLHS---RDVVYRDIKLENLMLD-------------------------KDGHIKITDFG 140

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR---RSM 366
           L K+G     T  +    GT  Y APE +         D +  GVV+ EM+ GR    + 
Sbjct: 141 LCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198

Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           D  R      L E     L E  RF R + P            +A  L A  L +DPK R
Sbjct: 199 DHER------LFELI---LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 54.8 bits (132), Expect = 4e-08
 Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 39/206 (18%)

Query: 161 GTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFM 217
           GTG   A+K L    +   K+      E + L +L H  +V ++    ++++   + EF+
Sbjct: 41  GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFV 100

Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
             G L  HL R++   P  +             +LH    + +IYRD K  N+LLD    
Sbjct: 101 VGGELFTHL-RKAGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLD---- 152

Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 337
                                   + K++DFG AK  P+   T     + GT  Y APE 
Sbjct: 153 ---------------------NKGHVKVTDFGFAKKVPDRTFT-----LCGTPEYLAPEV 186

Query: 338 VMT-GHLTSRSDVYSFGVVLLEMLTG 362
           + + GH     D ++ GV+L E + G
Sbjct: 187 IQSKGH-GKAVDWWTMGVLLYEFIAG 211

Length = 329

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 53.9 bits (130), Expect = 6e-08
 Identities = 65/255 (25%), Positives = 102/255 (40%), Gaps = 77/255 (30%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAE 185
            F   + +GEG +G V++              +G  VA+K +      DG+      L E
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTT---------SGEIVALKKVRMDNERDGIPISS--LRE 56

Query: 186 VNFLGDLVHLNLVKL---------------IGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
           +  L +L H N+V+L               + YC +D   LL  + MP            
Sbjct: 57  ITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLL--DNMPT----------- 103

Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            P   S    + L   +GL +LHE     +I+RD K SN+LL      + G    C+   
Sbjct: 104 -PFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLT-----DKG----CL--- 147

Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHLTSRSD 348
                        K++DFGLA+    G      T  + T  Y APE +   T + T+  D
Sbjct: 148 -------------KIADFGLAR--TYGLPAKPMTPKVVTLWYRAPELLLGCTTY-TTAID 191

Query: 349 VYSFGVVLLEMLTGR 363
           +++ G +L E+L  +
Sbjct: 192 MWAVGCILAELLAHK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 53.9 bits (129), Expect = 6e-08
 Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 67/283 (23%)

Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
           TG  VAVK ++    Q  +    EV  + D  H N+V +    +  D+  +V EF+  G+
Sbjct: 46  TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105

Query: 222 LENHLFRRSLPLPWSIRMK------IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV 275
           L +        +    RM       + L   + L++LH +    VI+RD K+ +ILL + 
Sbjct: 106 LTD--------IVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTS- 153

Query: 276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 331
                                   D   KLSDFG    ++K+ P+         ++GT  
Sbjct: 154 ------------------------DGRIKLSDFGFCAQVSKEVPK------RKSLVGTPY 183

Query: 332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF 391
           + APE +      +  D++S G++++EM+ G                 +  P L   RR 
Sbjct: 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY-------------FNEPPLQAMRRI 230

Query: 392 YRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
              + PR++    +    +        L R+P  R    E+++
Sbjct: 231 RDNLPPRVKDSHKVSSVLRG--FLDLMLVREPSQRATAQELLQ 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 53.9 bits (129), Expect = 6e-08
 Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 46/208 (22%)

Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
           +G  VAVK ++    Q  +    EV  + D  H N+V++    +  ++  ++ EF+  G+
Sbjct: 45  SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104

Query: 222 LENHLFRRSLPLPWSIRMKIAL---GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
           L + + +  L        +IA       + L +LH +    VI+RD K+ +ILL      
Sbjct: 105 LTDIVSQTRLN-----EEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTL---- 152

Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAA 334
                                D   KLSDFG    ++KD P+         ++GT  + A
Sbjct: 153 ---------------------DGRVKLSDFGFCAQISKDVPK------RKSLVGTPYWMA 185

Query: 335 PEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           PE +      +  D++S G++++EM+ G
Sbjct: 186 PEVISRTPYGTEVDIWSLGIMVIEMVDG 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.5 bits (128), Expect = 6e-08
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 58/246 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLA--- 184
           N+R   LLG G FG V+  +  +         TG  +AVK +  + D  +  KE  A   
Sbjct: 3   NWRLGKLLGRGAFGEVYLCYDAD---------TGRELAVKQVPFDPDSQETSKEVNALEC 53

Query: 185 EVNFLGDLVHLNLVKLIGYCIED--DQRLLVY-EFMPRGSLENHLFRRSLPLPWSIRMKI 241
           E+  L +L H  +V+  G C+ D  +++L ++ E+MP GS+++ L +    L  ++  + 
Sbjct: 54  EIQLLKNLRHDRIVQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQL-KAYGALTENVTRRY 111

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +G+++LH      +++RD K +NIL D+                           
Sbjct: 112 TRQILQGVSYLHSNM---IVHRDIKGANILRDSAG------------------------- 143

Query: 302 NAKLSDFGLAKD------GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
           N KL DFG +K          G K+     V GT  + +PE +       ++DV+S    
Sbjct: 144 NVKLGDFGASKRIQTICMSGTGIKS-----VTGTPYWMSPEVISGEGYGRKADVWSVACT 198

Query: 356 LLEMLT 361
           ++EMLT
Sbjct: 199 VVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 52.7 bits (126), Expect = 1e-07
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 42/192 (21%)

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH-------LFRRSLPLPWSI 237
           EV  L  + H N+V       E+ +  +V E+   G L          LF     L W +
Sbjct: 49  EVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFV 108

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
             +I+LG    L  +H+   R +++RD K+ NI L                     N M+
Sbjct: 109 --QISLG----LKHIHD---RKILHRDIKSQNIFLSK-------------------NGMV 140

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
                AKL DFG+A+     D   ++   +GT  Y +PE        +++D++S G VL 
Sbjct: 141 -----AKLGDFGIARQ--LNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLY 193

Query: 358 EMLTGRRSMDKN 369
           E+ T +   + N
Sbjct: 194 ELCTLKHPFEGN 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 57/238 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           +GEG +G V+K              T  T+A+K +    L+   E      + E++ L +
Sbjct: 10  IGEGTYGVVYKARDRV---------TNETIALKKIR---LEQEDEGVPSTAIREISLLKE 57

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-----FRRSLPLPWSIRMKIALGAA 246
           + H N+V+L      + +  LV+E++    L+ H+     F ++  L  +   +I     
Sbjct: 58  MQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI----L 112

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +G+A+ H      V++RD K  N+L+D                     N L      KL+
Sbjct: 113 RGIAYCH---SHRVLHRDLKPQNLLIDRRT------------------NAL------KLA 145

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+    G      T  + T  Y APE ++ + H ++  D++S G +  EM+  +
Sbjct: 146 DFGLAR--AFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK 201

Length = 294

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 53.5 bits (129), Expect = 1e-07
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 117 RGLKYIHSAN---VLHRDLKPSNLLLNTN----------C---------------DLKIC 148

Query: 307 DFGLAK-DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   PE D T   T  + T  Y APE ++     +++ D++S G +L EML+ R
Sbjct: 149 DFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 52/187 (27%)

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHL-----FRRSLPLPWSI 237
           E   L ++ H  +++L  +  E DQR L  + E++P G L ++L     F  S  L ++ 
Sbjct: 51  EKRVLKEVSHPFIIRL--FWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYAS 108

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +  AL       +LH    + ++YRD K  NILLD                        
Sbjct: 109 EIVCAL------EYLHS---KEIVYRDLKPENILLD------------------------ 135

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVM-TGHLTSRSDVYSFGVV 355
            ++ + KL+DFG AK      K    T  + GT  Y APE +   GH  +  D ++ G++
Sbjct: 136 -KEGHIKLTDFGFAK------KLRDRTWTLCGTPEYLAPEVIQSKGHNKA-VDWWALGIL 187

Query: 356 LLEMLTG 362
           + EML G
Sbjct: 188 IYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 72/233 (30%), Positives = 98/233 (42%), Gaps = 48/233 (20%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVN-FLGD 191
           ++G+G FG V     + +G            AVK L    +   KE    +AE N  L +
Sbjct: 2   VIGKGSFGKVLLAKRKLDGKC---------YAVKVLQKKIVLNRKEQKHIMAERNVLLKN 52

Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGL 249
           + H  LV L  Y  +  ++L  V +F+  G L  HL R RS P P + R   A   A  L
Sbjct: 53  VKHPFLVGL-HYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRA-RFYAA-EIASAL 109

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH      ++YRD K  NILLD+         G  +                 L+DFG
Sbjct: 110 GYLHS---INIVYRDLKPENILLDSQ--------GHVV-----------------LTDFG 141

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           L K+G     T  +T   GT  Y APE +      +  D +  G VL EML G
Sbjct: 142 LCKEGIAQSDT--TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 67/216 (31%), Positives = 83/216 (38%), Gaps = 51/216 (23%)

Query: 212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL 271
           LV  F+  G L +HL R         R   A    + L  L    +  VIYRD K  NIL
Sbjct: 70  LVLAFINGGELFHHLQREGRFDLSRARFYTA----ELLCALENLHKFNVIYRDLKPENIL 125

Query: 272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK-DGPEGDKTHVSTRVMGTY 330
           LD              Y G           +  L DFGL K +  + DKT+      GT 
Sbjct: 126 LD--------------YQG-----------HIALCDFGLCKLNMKDDDKTNT---FCGTP 157

Query: 331 GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR 390
            Y APE ++    T   D ++ GV+L EMLTG        P  + N+ E  R  L E  R
Sbjct: 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL------PPFYDENVNEMYRKILQEPLR 211

Query: 391 FYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           F    D            + A  L    LSRDP  R
Sbjct: 212 FPDGFD------------RDAKDLLIGLLSRDPTRR 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 70/244 (28%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           +GEG +G V+K   +          TG  VA+K +    L+   E      + E++ L +
Sbjct: 7   IGEGTYGVVYKARDKL---------TGEIVALKKIR---LETEDEGVPSTAIREISLLKE 54

Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA---- 246
           L H N+V+L+   +  + +L LV+EF+    L+   +  S P          L       
Sbjct: 55  LNHPNIVRLLD-VVHSENKLYLVFEFL---DLDLKKYMDSSP-------LTGLDPPLIKS 103

Query: 247 ------KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +G+A+ H      V++RD K  N+L+D                         ++
Sbjct: 104 YLYQLLQGIAYCHS---HRVLHRDLKPQNLLID-------------------------RE 135

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEM 359
              KL+DFGLA+    G      T  + T  Y APE ++     S   D++S G +  EM
Sbjct: 136 GALKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEM 193

Query: 360 LTGR 363
           +  R
Sbjct: 194 VNRR 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 52.5 bits (126), Expect = 2e-07
 Identities = 87/300 (29%), Positives = 116/300 (38%), Gaps = 73/300 (24%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDL 192
           LLG+G FG V    + E  T       G   A+K L  + +    E    L E   L + 
Sbjct: 2   LLGKGTFGKVI--LVREKAT-------GKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT 52

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA--AKGL 249
            H  L  L  Y  +   RL  V E+   G L  HL R  +      R     GA     L
Sbjct: 53  RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF---YGAEIVSAL 108

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH      V+YRD K  N++LD                         +D + K++DFG
Sbjct: 109 GYLHS---CDVVYRDLKLENLMLD-------------------------KDGHIKITDFG 140

Query: 310 LAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMD 367
           L K+G  +G          GT  Y APE V+  +   R+ D +  GVV+ EM+ GR    
Sbjct: 141 LCKEGISDGATM---KTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF- 195

Query: 368 KNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               N +H  L E     L E  RF R + P            +A  L A  L +DPK R
Sbjct: 196 ---YNQDHEKLFELI---LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 52.5 bits (126), Expect = 2e-07
 Identities = 67/248 (27%), Positives = 100/248 (40%), Gaps = 64/248 (25%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFL 189
             +GEG +G V+K              TG  VA+K +    L   KE      + E+  L
Sbjct: 13  GQIGEGTYGQVYKA---------RDKDTGELVALKKVR---LDNEKEGFPITAIREIKIL 60

Query: 190 GDLVHLNLVKLIGYCIEDDQRL----------LVYEFMPR---GSLENHLFRRSLPLPWS 236
             L H N+V L     +    L          LV+E+M     G LE+ L   S     S
Sbjct: 61  RQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKS 120

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
             MK  L   +GL + H+   +  ++RD K SNILL+     N G+              
Sbjct: 121 F-MKQLL---EGLNYCHK---KNFLHRDIKCSNILLN-----NKGQI------------- 155

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVV 355
                  KL+DFGLA+     +    + +V+ T  Y  PE ++       + DV+S G +
Sbjct: 156 -------KLADFGLARLYNSEESRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCI 207

Query: 356 LLEMLTGR 363
           L E+ T +
Sbjct: 208 LGELFTKK 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 64/248 (25%), Positives = 99/248 (39%), Gaps = 56/248 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEV 186
           +F    +LG+G FG V          A  K GT    A+K L  D +    +    + E 
Sbjct: 1   DFNFLMVLGKGSFGKVM--------LAERK-GTDELYAIKILKKDVVIQDDDVECTMVEK 51

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLPWSIRMK 240
             L        +  +  C +   RL  V E++  G L  H+     F+    + ++  + 
Sbjct: 52  RVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 111

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +      GL FLH    R +IYRD K  N++LD+                         +
Sbjct: 112 V------GLFFLHR---RGIIYRDLKLDNVMLDS-------------------------E 137

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
            + K++DFG+ K   E     V+TR   GT  Y APE +         D +++GV+L EM
Sbjct: 138 GHIKIADFGMCK---EHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 194

Query: 360 LTGRRSMD 367
           L G+   D
Sbjct: 195 LAGQPPFD 202

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 48/169 (28%), Positives = 66/169 (39%), Gaps = 44/169 (26%)

Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSI----RMKIALGAAKGLAFLHEEAE 257
           Y  +DD+ L +V E+MP G L N +    +P  W+      + +AL A   + F+H    
Sbjct: 110 YAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIH---- 165

Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
                RD K  N+LLD       G                      KL+DFG        
Sbjct: 166 -----RDVKPDNMLLDK-----SGHL--------------------KLADFGTCMKMDAN 195

Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
                 T V GT  Y +PE + +    G+     D +S GV L EML G
Sbjct: 196 GMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 52.4 bits (125), Expect = 3e-07
 Identities = 68/252 (26%), Positives = 101/252 (40%), Gaps = 40/252 (15%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ----GHKEWLA 184
           +F    ++G G FG V             K  TG   A+K L   D L+    GH    A
Sbjct: 2   DFESLKVIGRGAFGEV---------RLVQKKDTGHVYAMKILRKADMLEKEQVGHIR--A 50

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIA- 242
           E + L +   L +VK+  Y  +D   L L+ EF+P G +   L ++        +  IA 
Sbjct: 51  ERDILVEADSLWVVKMF-YSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAE 109

Query: 243 ----LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
               + +   L F+H         RD K  N+LLD+        FG C           +
Sbjct: 110 TVLAIDSIHQLGFIH---------RDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160

Query: 299 QDYNAKL-SDFGL----AKDGPEG---DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
           ++ N  L SDF      +K   E    ++  ++   +GT  Y APE  M        D +
Sbjct: 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWW 220

Query: 351 SFGVVLLEMLTG 362
           S GV++ EML G
Sbjct: 221 SLGVIMYEMLIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +F    ++G G FG V             K  TG   A+K L    +   KE +A +   
Sbjct: 2   DFESLKVIGRGAFGEV---------RLVQKKDTGHIYAMKILRKADML-EKEQVAHIRAE 51

Query: 190 GD-LVHLN---LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKI--- 241
            D LV  +   +VK+  Y  +D + L L+ EF+P G +   L ++      + +  I   
Sbjct: 52  RDILVEADGAWVVKMF-YSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAET 110

Query: 242 --ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL-------F 292
             A+ A   L F+H         RD K  N+LLDA        FG C   GL       F
Sbjct: 111 VLAIDAIHQLGFIH---------RDIKPDNLLLDAKGHVKLSDFGLCT--GLKKAHRTEF 159

Query: 293 FNNML--------FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT 344
           + N+         FQ+ N+K       K+     +  ++   +GT  Y APE  M     
Sbjct: 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKN-----RRQLAYSTVGTPDYIAPEVFMQTGYN 214

Query: 345 SRSDVYSFGVVLLEMLTG 362
              D +S GV++ EML G
Sbjct: 215 KLCDWWSLGVIMYEMLIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 51.9 bits (124), Expect = 4e-07
 Identities = 68/232 (29%), Positives = 96/232 (41%), Gaps = 46/232 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVN-FLGD 191
           ++G+G FG V     + +G+           AVK L    +   KE    +AE N  L +
Sbjct: 2   VIGKGSFGKVLLAKRKSDGS---------FYAVKVLQKKTILKKKEQNHIMAERNVLLKN 52

Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
           L H  LV L  Y  +  ++L  V +++  G L  HL R    L    R   A   A  + 
Sbjct: 53  LKHPFLVGL-HYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARF-YAAEVASAIG 110

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      +IYRD K  NILLD+                           +  L+DFGL
Sbjct: 111 YLHSLN---IIYRDLKPENILLDS-------------------------QGHVVLTDFGL 142

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+G E ++T  ++   GT  Y APE +         D +  G VL EML G
Sbjct: 143 CKEGVEPEET--TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 56/214 (26%)

Query: 166 VAVKTLNHDGLQGHKEWLA----EVNFLGDLVHLNLVKLIGYCIEDDQRL----LVYEFM 217
           V ++T      +GHK  +     E+  L  +   N++K+ G+ I+    L    L+ E+ 
Sbjct: 46  VIIRTFKKFH-KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104

Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
            RG L   L  +   L +  ++ +A+   KGL  L++   +P  Y++  + + L+     
Sbjct: 105 TRGYLREVL-DKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVT---- 157

Query: 278 ENYG-KFGFCIYYGLF----FNN---MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
           ENY  K        +     F N   M++  Y      F                     
Sbjct: 158 ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFS-------------------- 197

Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
                 EY      T + D+YS GVVL E+ TG+
Sbjct: 198 ------EY------TIKDDIYSLGVVLWEIFTGK 219

Length = 283

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 51.2 bits (123), Expect = 5e-07
 Identities = 66/255 (25%), Positives = 99/255 (38%), Gaps = 43/255 (16%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEV-- 186
           +F    ++G G FG V             K  TG   A+K L   + L+  KE +A V  
Sbjct: 2   DFESIKVIGRGAFGEV---------RLVQKKDTGHIYAMKKLRKSEMLE--KEQVAHVRA 50

Query: 187 --NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKI-- 241
             + L +  +  +VKL  Y  +D+  L L+ E++P G +   L ++        R  I  
Sbjct: 51  ERDILAEADNPWVVKLY-YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAE 109

Query: 242 ---ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
              A+ +   L ++H         RD K  N+LLDA        FG C           +
Sbjct: 110 TILAIDSIHKLGYIH---------RDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160

Query: 299 QDYN-AKLSDFGLAKDGPEGDKTHVST-----RVM-----GTYGYAAPEYVMTGHLTSRS 347
           +  + A  S+F      P   K    T     R +     GT  Y APE  +        
Sbjct: 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC 220

Query: 348 DVYSFGVVLLEMLTG 362
           D +S GV++ EML G
Sbjct: 221 DWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 51.2 bits (122), Expect = 6e-07
 Identities = 49/170 (28%), Positives = 69/170 (40%), Gaps = 45/170 (26%)

Query: 203 YC-IEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEA 256
           +C  +DD+ L +V E+MP G L N +    +P  W    +  + +AL A   +  +H   
Sbjct: 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH--- 165

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
                 RD K  N+LLD        K G                 + KL+DFG      E
Sbjct: 166 ------RDVKPDNMLLD--------KHG-----------------HLKLADFGTCMKMDE 194

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
                  T V GT  Y +PE + +    G+     D +S GV L EML G
Sbjct: 195 TGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 50.5 bits (120), Expect = 8e-07
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 47/229 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G VF           +   TG  VA+K +N       +  + E+  + +L + N
Sbjct: 27  IGQGASGTVFTA---------IDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPN 77

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL---GAAKGLAFLH 253
           +V  +   +  D+  +V E++  GSL + +    +        +IA       + L FLH
Sbjct: 78  IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMD-----EAQIAAVCRECLQALEFLH 132

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                 VI+RD K+ N+LL    +     FGFC                        A+ 
Sbjct: 133 ANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFC------------------------AQI 165

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            PE  K    + ++GT  + APE V       + D++S G++ +EM+ G
Sbjct: 166 TPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 41/150 (27%), Positives = 58/150 (38%), Gaps = 29/150 (19%)

Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
           RS PLP    + I     + LA+LH    R +I+RD KT NI LD               
Sbjct: 178 RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLD--------------- 219

Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                     +  NA L DFG A        T       GT    +PE +      +++D
Sbjct: 220 ----------EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTD 269

Query: 349 VYSFGVVLLEMLTGRRSM-DKNRPNGEHNL 377
           ++S G+VL EM     ++  K   +    L
Sbjct: 270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299

Length = 392

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 50.4 bits (120), Expect = 1e-06
 Identities = 76/310 (24%), Positives = 121/310 (39%), Gaps = 70/310 (22%)

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIA 242
           +E++ L    H  +VK       DD+ LL+ E+   G L   + +R    LP+    ++ 
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQ-EYEVG 172

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           L   + +  L E   R +++RD K++NI              F +  G+           
Sbjct: 173 LLFYQIVLALDEVHSRKMMHRDLKSANI--------------FLMPTGII---------- 208

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG +K   +     V++   GT  Y APE       + ++D++S GV+L E+LT 
Sbjct: 209 -KLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT- 266

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRR------FYRLIDPRLEGHFSIKGAQKAAQLAA 416
                              RP  G  +R       Y   DP     F    +     L  
Sbjct: 267 -----------------LHRPFKGPSQREIMQQVLYGKYDP-----FPCPVSSGMKALLD 304

Query: 417 HCLSRDPKARPLMSEVV--EALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQG 474
             LS++P  RP   +++  E LK + NL         FQ +       SP+ R  I  Q 
Sbjct: 305 PLLSKNPALRPTTQQLLHTEFLKYVANL---------FQDIVRHSETISPHDREEILRQ- 354

Query: 475 GSLSRNGQRS 484
             L  +G+R+
Sbjct: 355 --LQESGERA 362

Length = 478

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 66/239 (27%), Positives = 99/239 (41%), Gaps = 53/239 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G +  +G  P +      V VK L     +Q   ++L E      L H 
Sbjct: 3   IGNGWFGKVILGEVN-SGYTPAQ------VVVKELRVSASVQEQMKFLEEAQPYRSLQHS 55

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-------LPLPWSIRMKIALGAAKG 248
           NL++ +G C E    LLV EF P G L+ +L  RS        P P +++ ++A   A G
Sbjct: 56  NLLQCLGQCTEVTPYLLVMEFCPLGDLKGYL--RSCRKAELMTPDPTTLQ-RMACEIALG 112

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L  LH+      I+ D    N LL A                         D   K+ D+
Sbjct: 113 LLHLHKNN---FIHSDLALRNCLLTA-------------------------DLTVKIGDY 144

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHL-----TSRSDVYSFGVVLLEML 360
           GL+ +  + D      ++     + APE V  + G+L     T  S+V+S GV + E+ 
Sbjct: 145 GLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELF 203

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 83/351 (23%), Positives = 127/351 (36%), Gaps = 77/351 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
           LG G FG V    +E       K    +TVAVK L        +E L      +++LG+ 
Sbjct: 43  LGAGAFGKV----VEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 97

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H+N+V L+G C      L++ E+   G L N L R+            A  A       
Sbjct: 98  -HINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLH 156

Query: 253 HEE--AERPVIYRDFK---------------------------TSNILLD---AVRAENY 280
             E   +    Y D K                           TS IL +   A+  E+ 
Sbjct: 157 QREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDL 216

Query: 281 GKFGFCIYYGLFF---NNMLFQDYNA-----------KLSDFGLAKDGPEGDKTHVSTRV 326
             F + +  G+ F    N + +D  A           K+ DFGLA+D        V    
Sbjct: 217 LSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNA 276

Query: 327 MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 386
                + APE +     T  SDV+S+G++L E+ +               L     P + 
Sbjct: 277 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS---------------LGSSPYPGMP 321

Query: 387 ERRRFYRLIDPRLEGH--FSIKGA-QKAAQLAAHCLSRDPKARPLMSEVVE 434
              +FY++I    EG+   S + A  +   +   C   DP  RP   ++V+
Sbjct: 322 VDSKFYKMIK---EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 48.4 bits (115), Expect = 4e-06
 Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 48/232 (20%)

Query: 137 LGEGGFGCVFKGW--IEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLV 193
           LGEG +  VFKG   + EN            VA+K +  +  +G     + EV+ L DL 
Sbjct: 14  LGEGTYATVFKGRSKLTEN-----------LVALKEIRLEHEEGAPCTAIREVSLLKDLK 62

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAFL 252
           H N+V L      D    LV+E++ +  L+ ++      +     +KI L    +GLA+ 
Sbjct: 63  HANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMH-NVKIFLYQILRGLAYC 120

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H    R V++RD K  N+L++  R E                         KL+DFGLA+
Sbjct: 121 HR---RKVLHRDLKPQNLLINE-RGE------------------------LKLADFGLAR 152

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
                 KT+ +  V  T  Y  P+ ++ +   +++ D++  G +  EM +GR
Sbjct: 153 AKSVPTKTYSNEVV--TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 48.9 bits (116), Expect = 4e-06
 Identities = 61/284 (21%), Positives = 119/284 (41%), Gaps = 62/284 (21%)

Query: 91  STTTSNAESNSSTSKLEEELKVASRLRKFTFNDL-KLATRNFRPESLLGEGGFGCVFKGW 149
                    N++  + E+E K+         ND+ +   ++++  +++G G FG V++  
Sbjct: 34  KLDEEERSHNNNAGEDEDEEKMID-------NDINRSPNKSYKLGNIIGNGSFGVVYEA- 85

Query: 150 IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGY----CI 205
                   +   T   VA+K +  D    ++E L     + +L H+N++ L  Y    C 
Sbjct: 86  --------ICIDTSEKVAIKKVLQDPQYKNRELL----IMKNLNHINIIFLKDYYYTECF 133

Query: 206 EDDQRLL----VYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP 259
           + +++ +    V EF+P+       H  R +  LP  +    +    + LA++H +    
Sbjct: 134 KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--- 190

Query: 260 VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK 319
           + +RD K  N+L+D                           +  KL DFG AK+   G +
Sbjct: 191 ICHRDLKPQNLLIDP------------------------NTHTLKLCDFGSAKNLLAGQR 226

Query: 320 THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
              S   + +  Y APE ++   + T+  D++S G ++ EM+ G
Sbjct: 227 ---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267

Length = 440

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 48.5 bits (115), Expect = 4e-06
 Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 38/166 (22%)

Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
           Y  +DD+ L +V E+MP G L N +    +P  W    +  + +AL A   + F+H    
Sbjct: 110 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 165

Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK-DGPE 316
                RD K  N+LLD         FG C+                K++  G+ + D   
Sbjct: 166 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVRCDTAV 204

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           G   ++S  V+ + G         G+     D +S GV L EML G
Sbjct: 205 GTPDYISPEVLKSQG-------GDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 48.2 bits (114), Expect = 5e-06
 Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 43/227 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA++ +N       +  + E+  + +  + N
Sbjct: 28  IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K+ NILL                           D + KL+DFG  A+  P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G
Sbjct: 169 EQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 36/119 (30%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SNI   AV                       +D   K+ 
Sbjct: 129 RGLKYIHSAG---IIHRDLKPSNI---AVN----------------------EDCELKIL 160

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE +M    H     D++S G ++ E+LTG+
Sbjct: 161 DFGLARHTDDEMTGYVATR-----WYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 47.8 bits (113), Expect = 5e-06
 Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 43/227 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA+K +N       +  + E+  + +  + N
Sbjct: 27  IGQGASGTVYTA---------IDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPN 77

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 78  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALDFLHSNQ 135

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K+ NILL                           D + KL+DFG  A+  P
Sbjct: 136 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 167

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G
Sbjct: 168 EQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 44/171 (25%)

Query: 204 CIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLPWSIRMKIALGAAKGLAFLHEEAE 257
           C +   RL  V E++  G L   +     F+    + ++  + I      GL FLH +  
Sbjct: 69  CFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAI------GLFFLHSKG- 121

Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
             +IYRD K  N++LD+                         + + K++DFG+ K   E 
Sbjct: 122 --IIYRDLKLDNVMLDS-------------------------EGHIKIADFGMCK---EN 151

Query: 318 DKTHVSTRVM-GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
               V+T+   GT  Y APE +         D ++FGV+L EML G+   +
Sbjct: 152 MWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 48.3 bits (115), Expect = 6e-06
 Identities = 52/176 (29%), Positives = 72/176 (40%), Gaps = 42/176 (23%)

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           +H    + +I+RD K++NILL             C       +N L      KL DFG +
Sbjct: 156 VHHVHSKHMIHRDIKSANILL-------------C-------SNGL-----VKLGDFGFS 190

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           K         V     GT  Y APE       + ++D++S GV+L E+LT +R  D    
Sbjct: 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD---- 246

Query: 372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
            GE N+ E     L  R       DP L    S     +  ++    LS DPK RP
Sbjct: 247 -GE-NMEEVMHKTLAGR------YDP-LPPSIS----PEMQEIVTALLSSDPKRRP 289

Length = 496

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 47.6 bits (114), Expect = 6e-06
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 71/243 (29%)

Query: 139 EGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGDLV 193
           EG +G V++              TG  VA+K L  +     KE      L E+N L  L 
Sbjct: 15  EGTYGVVYRA---------RDKKTGEIVALKKLKMEK---EKEGFPITSLREINILLKLQ 62

Query: 194 HLNLVKL----IGYCIEDDQRLLVYEFMP---RGSLENHLFRRSLPLPWSIR-----MKI 241
           H N+V +    +G  +  D+  +V E++    +  +E          P+        M  
Sbjct: 63  HPNIVTVKEVVVGSNL--DKIYMVMEYVEHDLKSLMETM------KQPFLQSEVKCLMLQ 114

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            L    G+A LH+     +++RD KTSN+LL+     N G                    
Sbjct: 115 LL---SGVAHLHD---NWILHRDLKTSNLLLN-----NRGIL------------------ 145

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             K+ DFGLA+    G      T+++ T  Y APE ++     ++  D++S G +  E+L
Sbjct: 146 --KICDFGLAR--EYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL 201

Query: 361 TGR 363
           T +
Sbjct: 202 TKK 204

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 47.2 bits (112), Expect = 6e-06
 Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 49/185 (26%)

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLP------WSIRMKIALGAAKGL 249
           N+V L  Y + +D   LV +    G L +H+ +  L +P      W+  M +AL A    
Sbjct: 46  NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDA---- 100

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             LH E    ++ RD   +NILLD                            + +L+ F 
Sbjct: 101 --LHREG---IVCRDLNPNNILLD-------------------------DRGHIQLTYFS 130

Query: 310 LAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
              +     D   V         Y APE       T   D +S G +L E+LTG +++ +
Sbjct: 131 RWSEVEDSCDGEAVENM------YCAPEVGGISEETEACDWWSLGAILFELLTG-KTLVE 183

Query: 369 NRPNG 373
             P+G
Sbjct: 184 CHPSG 188

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 47.9 bits (114), Expect = 7e-06
 Identities = 64/269 (23%), Positives = 103/269 (38%), Gaps = 82/269 (30%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           DL     + RP   LG G  G VF         + V       VAVK +     Q  K  
Sbjct: 2   DLGSRYMDLRP---LGCGSNGLVF---------SAVDSDCDKRVAVKKIVLTDPQSVKHA 49

Query: 183 LAEVNFLGDLVHLNLVKL--------------IGYCIEDDQRLLVYEFMP--------RG 220
           L E+  +  L H N+VK+              +G   E +   +V E+M         +G
Sbjct: 50  LREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG 109

Query: 221 SL-ENH--LFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
            L E H  LF   L               +GL ++H      V++RD K +N+ ++    
Sbjct: 110 PLSEEHARLFMYQL--------------LRGLKYIHSAN---VLHRDLKPANVFINT--- 149

Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAP 335
                                +D   K+ DFGLA+  D     K ++S  ++  + Y +P
Sbjct: 150 ---------------------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKW-YRSP 187

Query: 336 EYVMT-GHLTSRSDVYSFGVVLLEMLTGR 363
             +++  + T   D+++ G +  EMLTG+
Sbjct: 188 RLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 35/164 (21%)

Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI 261
           Y  + D +L L+ +++  G L  HL +R       +++         L  LH+     +I
Sbjct: 72  YAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSG-EIVLALEHLHKLG---II 127

Query: 262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH 321
           YRD K  NILLD+                         + +  L+DFGL+K+  E D+  
Sbjct: 128 YRDIKLENILLDS-------------------------NGHVVLTDFGLSKEFHE-DEVE 161

Query: 322 VSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTG 362
            +    GT  Y AP+ V     GH     D +S GV++ E+LTG
Sbjct: 162 RAYSFCGTIEYMAPDIVRGGDGGH-DKAVDWWSMGVLMYELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 44/230 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           LGEG +  V+KG    NG           VA+K ++    +G     + E + L  L H 
Sbjct: 13  LGEGSYATVYKGISRINGQ---------LVALKVISMKTEEGVPFTAIREASLLKGLKHA 63

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
           N+V L       +    V+E+M    L  ++ +    L P+++R+       +GLA++H 
Sbjct: 64  NIVLLHDIIHTKETLTFVFEYM-HTDLAQYMIQHPGGLHPYNVRL-FMFQLLRGLAYIH- 120

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              + +++RD K  N+L+               Y G             KL+DFGLA+  
Sbjct: 121 --GQHILHRDLKPQNLLIS--------------YLG-----------ELKLADFGLARAK 153

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
               +T+ S  V  T  Y  P+ ++     +S  D++  G + +EML G+
Sbjct: 154 SIPSQTYSSEVV--TLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ 201

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 40/206 (19%)

Query: 162 TGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMP 218
           TG  VA+K +          K    E+  L  L H N++ L    I   + +  V E + 
Sbjct: 34  TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL- 92

Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
               + H    S PL             +GL ++H      V++RD K SNIL++    E
Sbjct: 93  --GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILIN----E 143

Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
           N      C               + K+ DFGLA+        +VSTR      Y APE +
Sbjct: 144 N------C---------------DLKICDFGLARIQDPQMTGYVSTRY-----YRAPEIM 177

Query: 339 MTGH-LTSRSDVYSFGVVLLEMLTGR 363
           +T        D++S G +  EML G+
Sbjct: 178 LTWQKYDVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 51/170 (30%)

Query: 230 SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
           S PL     ++ +   A+G+ FL   A +  I+RD    N+LL   R             
Sbjct: 206 SWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRV------------ 250

Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT----YGYAAPEYVMTGHLTS 345
                        AK+ DFGLA+D    D  +V   V G       + APE +     T 
Sbjct: 251 -------------AKICDFGLARD-IMNDSNYV---VKGNARLPVKWMAPESIFDCVYTV 293

Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI 395
           +SDV+S+G++L E+     S+ K+             P +    +FY+++
Sbjct: 294 QSDVWSYGILLWEIF----SLGKS-----------PYPGILVNSKFYKMV 328

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 57/250 (22%), Positives = 89/250 (35%), Gaps = 73/250 (29%)

Query: 138 GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVH 194
           G G +G V+K               G   A+K    D  Q     +    E+  L +L H
Sbjct: 9   GRGTYGRVYKAK-------RKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 195 LNLVKLIGYCIEDDQRL--LVYEFMPRGSLENHLF----------RRSLP------LPWS 236
            N+V L+   +E   +   L++++      E+ L+          R S+P      L W 
Sbjct: 62  ENVVSLVEVFLEHADKSVYLLFDYA-----EHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ 116

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE----NYGKFGFCIYYGLF 292
           I          G+ +LH      V++RD K +NIL+     E      G  G        
Sbjct: 117 I--------LNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGL----ARL 161

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYS 351
           FN  L                  + D       V+ T  Y APE ++   H T   D+++
Sbjct: 162 FNAPLKPLA--------------DLDP------VVVTIWYRAPELLLGARHYTKAIDIWA 201

Query: 352 FGVVLLEMLT 361
            G +  E+LT
Sbjct: 202 IGCIFAELLT 211

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 59/265 (22%), Positives = 97/265 (36%), Gaps = 87/265 (32%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
            ++P   +G G +G V            +   +G  VA+K + H  D     K  L E+ 
Sbjct: 6   RYKPIENIGSGAYGVVCSA---------IDTRSGKKVAIKKIPHAFDVPTLAKRTLRELK 56

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR---------LLVYEFM---------PRGSLENHLFRR 229
            L    H N++      I D  R          +V + M             L     R 
Sbjct: 57  ILRHFKHDNII-----AIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRY 111

Query: 230 SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
            L   + +         +GL ++H      VI+RD K SN+L++                
Sbjct: 112 FL---YQL--------LRGLKYIHSAN---VIHRDLKPSNLLVN---------------- 141

Query: 290 GLFFNNMLFQDYNAKLSDFGLAK---DGPEGDKT----HVSTRVMGTYGYAAPEYVMTGH 342
                    +D   ++ DFG+A+     P   K     +V+TR      Y APE +++  
Sbjct: 142 ---------EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATR-----WYRAPELLLSLP 187

Query: 343 LTSRS-DVYSFGVVLLEMLTGRRSM 366
             + + D++S G +  EML GRR +
Sbjct: 188 EYTTAIDMWSVGCIFAEML-GRRQL 211

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 63/241 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK--TLNHDGLQGHKEWLAEVNFLGDLVH 194
           +GEG +G VFK    E         T   VA+K   L+ D        L E+  L +L H
Sbjct: 8   IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 58

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMP----------RGSLENHLFRRSLPLPWSIRMKIALG 244
            N+V+L      D +  LV+E+             G ++  + +  +             
Sbjct: 59  KNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFM-----------FQ 107

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             KGLAF H      V++RD K  N+L++                    N  L      K
Sbjct: 108 LLKGLAFCHSHN---VLHRDLKPQNLLINK-------------------NGEL------K 139

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      +  + T  Y  P+ +    L S S D++S G +  E+    
Sbjct: 140 LADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197

Query: 364 R 364
           R
Sbjct: 198 R 198

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 54/245 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL------QGHKEWL 183
           NF    +LG G +G VF   + +         TG   A+K L    L        H    
Sbjct: 1   NFELLKVLGTGAYGKVF--LVRKVT----GHDTGKLYAMKVLQKAALVQKAKTVEHTR-- 52

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRM--- 239
            E N L  +     +  + Y  + + +L L+ +++  G +  HL++R       +R    
Sbjct: 53  TERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSG 112

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           +I L     L  LH+     ++YRD K  NILLD+                         
Sbjct: 113 EIILA----LEHLHKLG---IVYRDIKLENILLDS------------------------- 140

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHLTSRSDVYSFGVVLL 357
           + +  L+DFGL+K+    +K    +   GT  Y APE +    GH     D +S G+++ 
Sbjct: 141 EGHVVLTDFGLSKEFLSEEKERTYS-FCGTIEYMAPEIIRGKGGH-GKAVDWWSLGILIF 198

Query: 358 EMLTG 362
           E+LTG
Sbjct: 199 ELLTG 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 30/118 (25%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL +LH      +++RD K  N+L++                    +N +      K+ 
Sbjct: 114 RGLKYLHSAG---ILHRDIKPGNLLVN--------------------SNCVL-----KIC 145

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+     +  H++  V+  Y Y APE +M + H TS  D++S G +  E+L  R
Sbjct: 146 DFGLARVEEPDESKHMTQEVVTQY-YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 64/232 (27%), Positives = 90/232 (38%), Gaps = 45/232 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDL 192
           LLG+G FG V    + E  +       G   A+K L  + +    E    L E   L + 
Sbjct: 2   LLGKGTFGKVI--LVREKAS-------GKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT 52

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
            H  L  L  Y  +   RL  V E++  G L  HL R  +      R   A      L +
Sbjct: 53  RHPFLTSL-KYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGA-EIVSALDY 110

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      ++YRD K  N++LD                         +D + K++DFGL 
Sbjct: 111 LHSGK---IVYRDLKLENLMLD-------------------------KDGHIKITDFGLC 142

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           K+G     T  +    GT  Y APE +         D +  GVV+ EM+ GR
Sbjct: 143 KEGITDAATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 75/313 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLVH 194
           LG+G +G V+K           +P TG+T+A+K +  + L   K  + + E++ L   V 
Sbjct: 9   LGKGNYGSVYK--------VLHRP-TGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVS 58

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIALGAAKGLAF 251
             +V   G    +    +  E+M  GSL+  L+   +    +P  +  +I     KGL F
Sbjct: 59  PYIVDFYGAFFIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRRITYAVVKGLKF 117

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L EE    +I+RD K +N+L++                          +   KL DFG++
Sbjct: 118 LKEEHN--IIHRDVKPTNVLVNG-------------------------NGQVKLCDFGVS 150

Query: 312 KDGPEG-DKTHVSTRVMGTYGYAAPEYVMTGHLTSR------SDVYSFGVVLLEMLTGRR 364
            +      KT++     G   Y APE + +G           SDV+S G+ +LEM  GR 
Sbjct: 151 GNLVASLAKTNI-----GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY 205

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLID---PRLEGHFSIKGAQKAAQLAAHCLSR 421
                 P    N+            +   ++D   P L   +S      A    A CL++
Sbjct: 206 PYP---PETYANIFA----------QLSAIVDGDPPTLPSGYS----DDAQDFVAKCLNK 248

Query: 422 DPKARPLMSEVVE 434
            P  RP  ++++E
Sbjct: 249 IPNRRPTYAQLLE 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 42/229 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           LGEG +  VFKG  +          T   VA+K +  +  +G     + EV+ L +L H 
Sbjct: 13  LGEGTYATVFKGRSKL---------TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHA 63

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V L      +    LV+E++    L+ +L      +             +GL++ H+ 
Sbjct: 64  NIVTLHDIIHTERCLTLVFEYL-DSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK- 121

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R +++RD K  N+L++  + E                         KL+DFGLA+   
Sbjct: 122 --RKILHRDLKPQNLLINE-KGE------------------------LKLADFGLARAKS 154

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
              KT+ +  V  T  Y  P+ ++ +   ++  D++  G +L EM TGR
Sbjct: 155 VPTKTYSNEVV--TLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 58/244 (23%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEV 186
           + P + +G G +G V+K            P +G  VA+K++    N DGL      + EV
Sbjct: 2   YEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVQTNEDGLP--LSTVREV 50

Query: 187 NFLGDLVHL---NLVKLIGYC--IEDDQRL---LVYEFMPRGSLENHLFRRSLP-LPWSI 237
             L  L      N+V+L+  C     D+     LV+E + +  L  +L +   P LP   
Sbjct: 51  ALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAET 109

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
              +     +GL FLH      +++RD K  NIL+ +                       
Sbjct: 110 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS----------------------- 143

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVS-TRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
                 KL+DFGLA+         ++ T V+ T  Y APE ++     +  D++S G + 
Sbjct: 144 --GGQVKLADFGLARIY----SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 197

Query: 357 LEML 360
            EM 
Sbjct: 198 AEMF 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 53/209 (25%), Positives = 77/209 (36%), Gaps = 70/209 (33%)

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           L  LH+     ++YRD K  NILLDA                           +  L DF
Sbjct: 109 LEHLHKY---DIVYRDLKPENILLDA-------------------------TGHIALCDF 140

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           GL+K     +KT  +    GT  Y APE ++   G+ T   D +S GV++ EM  G    
Sbjct: 141 GLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGY-TKHVDFWSLGVLVFEMCCG---- 193

Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLID------PR----LEGHFSIKGAQKAAQLAA 416
                        W+  +  + ++ YR I       P+     EG   +KG         
Sbjct: 194 -------------WSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKG--------- 231

Query: 417 HCLSRDPKARPLMSEVVEALKPLPNLKDM 445
             L+R+P+ R         LK  P   D+
Sbjct: 232 -LLNRNPQHRLGAHRDAVELKEHPFFADI 259

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 59/200 (29%), Positives = 80/200 (40%), Gaps = 35/200 (17%)

Query: 167 AVKTLNHDGLQGHKE---WLAEVN-FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL 222
           AVK L    +   KE    ++E N  L ++ H  LV L       D+   V +++  G L
Sbjct: 24  AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 83

Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
             HL R    L    R   A   A  L +LH      ++YRD K  NILLD+        
Sbjct: 84  FYHLQRERCFLEPRARF-YAAEIASALGYLHS---LNIVYRDLKPENILLDSQ------- 132

Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
            G  +                 L+DFGL K+  E + T  ++   GT  Y APE +    
Sbjct: 133 -GHIV-----------------LTDFGLCKENIEHNGT--TSTFCGTPEYLAPEVLHKQP 172

Query: 343 LTSRSDVYSFGVVLLEMLTG 362
                D +  G VL EML G
Sbjct: 173 YDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 62/239 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK--TLNHDGLQGHK-EWLAEVNFLGDLV 193
           LGEG +  V+KG  +  G           VA+K   L H+  +G     + E + L DL 
Sbjct: 13  LGEGSYATVYKGRSKLTGQL---------VALKEIRLEHE--EGAPFTAIREASLLKDLK 61

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRG---SLENHLFRRSLPLPWSIRM---KIAL-GAA 246
           H N+V L           LV+E++       +++            + M   ++ L    
Sbjct: 62  HANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDC--------GGGLSMHNVRLFLFQLL 113

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GLA+ H+   R V++RD K  N+L+   R E                         KL+
Sbjct: 114 RGLAYCHQ---RRVLHRDLKPQNLLISE-RGE------------------------LKLA 145

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+      KT+ +  V  T  Y  P+ ++  T + TS  D++  G +  EM TGR
Sbjct: 146 DFGLARAKSVPSKTYSNEVV--TLWYRPPDVLLGSTEYSTS-LDMWGVGCIFYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 57/249 (22%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL----- 183
           + +   + +GEG +G VFK    +NG        G  VA+K +    +Q  +E +     
Sbjct: 1   QQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVR---VQTGEEGMPLSTI 49

Query: 184 ---AEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LP 234
              A +  L    H N+V+L   C       + +  LV+E + +  L  +L +   P +P
Sbjct: 50  REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 108

Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
                 +     +GL FLH      V++RD K  NIL+ +                    
Sbjct: 109 TETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS-------------------- 145

Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
                    KL+DFGLA+           T V+ T  Y APE ++     +  D++S G 
Sbjct: 146 -----SGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 197

Query: 355 VLLEMLTGR 363
           +  EM   +
Sbjct: 198 IFAEMFRRK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 44.7 bits (105), Expect = 5e-05
 Identities = 81/321 (25%), Positives = 126/321 (39%), Gaps = 77/321 (23%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           F    L+G G +G V+KG         VK  TG   A+K ++  G +  +E   E+N L 
Sbjct: 8   FELVELVGNGTYGQVYKG-------RHVK--TGQLAAIKVMDVTGDE-EEEIKQEINMLK 57

Query: 191 DLVH-LNLVKLIGYCIE------DDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMK 240
              H  N+    G  I+      DDQ  LV EF   GS+ + +      +L   W     
Sbjct: 58  KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AY 115

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL+ LH+     VI+RD K  N+LL                          ++
Sbjct: 116 ICREILRGLSHLHQHK---VIHRDIKGQNVLLT-------------------------EN 147

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYVMTGH-----LTSRSDVYSFG 353
              KL DFG++    + D+T V  R   +GT  + APE +            +SD++S G
Sbjct: 148 AEVKLVDFGVSA---QLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 203

Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           +  +EM  G   +    P     L+              R   PRL+   S K ++K   
Sbjct: 204 ITAIEMAEGAPPLCDMHPMRALFLIP-------------RNPAPRLK---SKKWSKKFQS 247

Query: 414 LAAHCLSRDPKARPLMSEVVE 434
               CL ++   RP   ++++
Sbjct: 248 FIESCLVKNHSQRPTTEQLMK 268

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 44.6 bits (105), Expect = 8e-05
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 131 RGLKYIHSAD---IIHRDLKPSNLAVN-------------------------EDCELKIL 162

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 163 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 44.6 bits (105), Expect = 8e-05
 Identities = 61/256 (23%), Positives = 99/256 (38%), Gaps = 48/256 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL---AEVNFLGDLV 193
           LG G FG V             K  T    A+KTL    +    +     AE + L +  
Sbjct: 9   LGIGAFGEV---------CLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD 59

Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-----RSLPLPWSIRMKIALGAAK 247
           +  +VKL  Y  +D   L  V +++P G + + L R       L   +   + +A+ +  
Sbjct: 60  NEWVVKLY-YSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVH 118

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN----- 302
            + F+H         RD K  NIL+D         FG C  +    N+  +Q  +     
Sbjct: 119 KMGFIH---------RDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQD 169

Query: 303 -AKLSDF--------------GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS 347
             + SD                L +   +  +  ++  ++GT  Y APE ++    T   
Sbjct: 170 SMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLC 229

Query: 348 DVYSFGVVLLEMLTGR 363
           D +S GV+L EML G+
Sbjct: 230 DWWSVGVILFEMLVGQ 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 46/231 (19%)

Query: 137 LGEGGFGCVFKGW--IEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLV 193
           LGEG +  V+KG   + +N            VA+K +  +  +G     + EV+ L DL 
Sbjct: 14  LGEGTYATVYKGRSKLTDN-----------LVALKEIRLEHEEGAPCTAIREVSLLKDLK 62

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N+V L      +    LV+E++ +  L+ +L      +             +GL + H
Sbjct: 63  HANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH 121

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               R V++RD K  N+L++  R E                         KL+DFGLA+ 
Sbjct: 122 R---RKVLHRDLKPQNLLINE-RGE------------------------LKLADFGLARA 153

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
                KT+ +  V  T  Y  P+ ++ +   +++ D++  G +  EM TGR
Sbjct: 154 KSIPTKTYSNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 9e-05
 Identities = 62/242 (25%), Positives = 100/242 (41%), Gaps = 64/242 (26%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT----LNHDGLQGHKEWLAEVNFLG 190
           + +GEG +G V+K              TG  VA+K     L+ +G+      L E+  L 
Sbjct: 5   AEIGEGAYGTVYKA---------RDLNTGRFVALKKVRVPLSEEGIP--LSTLREIALLK 53

Query: 191 DLV---HLNLVKLIGYC--IEDDQRL---LVYEFMPR---GSLENHLFRRSLPLPWSIR- 238
            L    H N+V+L+  C     D+ L   LV+E + +     L     +  LP P +I+ 
Sbjct: 54  QLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCP-KPGLP-PETIKD 111

Query: 239 -MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            M+  L   +G+ FLH      +++RD K  NIL+ +                       
Sbjct: 112 LMRQLL---RGVDFLHSHR---IVHRDLKPQNILVTS----------------------- 142

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
             D   K++DFGLA+           T V+ T  Y APE ++     +  D++S G +  
Sbjct: 143 --DGQVKIADFGLAR---IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFA 197

Query: 358 EM 359
           E+
Sbjct: 198 EL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 43.7 bits (103), Expect = 9e-05
 Identities = 71/307 (23%), Positives = 120/307 (39%), Gaps = 71/307 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           +GEG FG       +E+G   V         +K +N   +     +E   EV  L ++ H
Sbjct: 8   IGEGSFGKAILVKSKEDGKQYV---------IKEINISKMSPKEREESRKEVAVLSNMKH 58

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-------ENHLFRRSLPLPWSIRMKIALGAAK 247
            N+V+      E+    +V ++   G L          LF     L W +++ +AL    
Sbjct: 59  PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLAL---- 114

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
               +H+   R +++RD K+ NI L                          +D   KL D
Sbjct: 115 --KHVHD---RKILHRDIKSQNIFLT-------------------------KDGTIKLGD 144

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FG+A+         ++   +GT  Y +PE        ++SD+++ G VL EM T + + +
Sbjct: 145 FGIAR--VLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
                   NLV      L   R  Y    P +  H+S       +QL      R+P+ RP
Sbjct: 203 A---GNMKNLV------LKIIRGSY----PPVSSHYSYDLRNLVSQL----FKRNPRDRP 245

Query: 428 LMSEVVE 434
            ++ ++E
Sbjct: 246 SVNSILE 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 34/118 (28%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            GL ++H      +I+RD K  N+ ++                         +D   K+ 
Sbjct: 128 CGLKYIHSAG---IIHRDLKPGNLAVN-------------------------EDCELKIL 159

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+        +V TR      Y APE ++   H     D++S G ++ EMLTG+
Sbjct: 160 DFGLARHADAEMTGYVVTR-----WYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 43.5 bits (103), Expect = 2e-04
 Identities = 69/265 (26%), Positives = 103/265 (38%), Gaps = 71/265 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           +G+G FG VFK        A  K  T   VA+K +    ++  KE      L E+  L  
Sbjct: 20  IGQGTFGEVFK--------ARHKK-TKQIVALKKVL---MENEKEGFPITALREIKILQL 67

Query: 192 LVHLNLVKLIGYCIEDDQR--------LLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
           L H N+V LI  C               LV+EF      G L N   + +L     + MK
Sbjct: 68  LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKV-MK 126

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           + L    GL ++H      +++RD K +NIL+                     + +L   
Sbjct: 127 MLL---NGLYYIHRNK---ILHRDMKAANILITK-------------------DGIL--- 158

Query: 301 YNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-----DVYSFG 353
              KL+DFGLA+     +  K +  T  + T  Y  PE +    L  R      D++  G
Sbjct: 159 ---KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELL----LGERDYGPPIDMWGAG 211

Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLV 378
            ++ EM T    M  N    +  L+
Sbjct: 212 CIMAEMWTRSPIMQGNTEQHQLTLI 236

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 34/118 (28%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KGL ++H      +I+RD K  N+ ++                         +D   K+ 
Sbjct: 129 KGLKYIHAAG---IIHRDLKPGNLAVN-------------------------EDCELKIL 160

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+        +V TR      Y APE ++   H T   D++S G ++ EMLTG+
Sbjct: 161 DFGLARQTDSEMTGYVVTR-----WYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 54/239 (22%)

Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H++L  + G C+   + ++V EF+  G L+  L +    +P + ++ +A   A  L++L 
Sbjct: 75  HIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE 134

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
           +   + +++ +    NILL         + G       F           KLSD G++  
Sbjct: 135 D---KNLVHGNVCAKNILL--------ARLGLAEGTSPFI----------KLSDPGVSFT 173

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
               ++     RV     + APE V  G  L++ +D +SFG  LLE+            +
Sbjct: 174 ALSREE-----RV-ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF----------D 217

Query: 373 GEHNLVEWARPHLGERRRFY----RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           GE  L E       E+ RFY    RL +P           ++ A L + CL+ +P  RP
Sbjct: 218 GEVPLKERTPS---EKERFYEKKHRLPEP---------SCKELATLISQCLTYEPTQRP 264

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 64/253 (25%), Positives = 92/253 (36%), Gaps = 51/253 (20%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F     LG G FG V          A  K      VA+K      +   K+   
Sbjct: 26  KMKYEDFNFIRTLGTGSFGRVI--------LATYKNEDFPPVAIKRFEKSKIIKQKQVDH 77

Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
             +E   L  + H   V L G   ++    LV EF+  G     L RR+   P  +    
Sbjct: 78  VFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFL-RRNKRFPNDVG--- 133

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
              AA+ +          ++YRD K  N+LLD        K GF                
Sbjct: 134 CFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD--------KDGFI--------------- 170

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
             K++DFG AK         V TR   + GT  Y APE ++       +D ++ G+ + E
Sbjct: 171 --KMTDFGFAKV--------VDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYE 220

Query: 359 MLTGRRSMDKNRP 371
           +L G      N P
Sbjct: 221 ILVGCPPFYANEP 233

Length = 340

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 68/249 (27%), Positives = 100/249 (40%), Gaps = 61/249 (24%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           F    ++G G +G V+KG         VK  TG   A+K ++    +  +E   E+N L 
Sbjct: 18  FELVEVVGNGTYGQVYKG-------RHVK--TGQLAAIKVMDVTEDE-EEEIKLEINMLK 67

Query: 191 DLVH-LNLVKLIGYCIE------DDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMK 240
              H  N+    G  I+      DDQ  LV EF   GS+ + +      +L   W     
Sbjct: 68  KYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWI--AY 125

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GLA LH      VI+RD K  N+LL                          ++
Sbjct: 126 ICREILRGLAHLHAHK---VIHRDIKGQNVLLT-------------------------EN 157

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYVMTGH-----LTSRSDVYSFG 353
              KL DFG++    + D+T V  R   +GT  + APE +            RSD++S G
Sbjct: 158 AEVKLVDFGVSA---QLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 213

Query: 354 VVLLEMLTG 362
           +  +EM  G
Sbjct: 214 ITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 60/246 (24%), Positives = 93/246 (37%), Gaps = 53/246 (21%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
              + P   +G G +G V          +     T   VA+K + +  D     K  L E
Sbjct: 4   DTKYVPIKPIGRGAYGIV---------CSAKNSETNEKVAIKKIANAFDNRIDAKRTLRE 54

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQR------LLVYEFMPRGSLENH-LFRRSLPLPWSIR 238
           +  L  L H N++ +    +    R       +VYE M     + H + R S  L     
Sbjct: 55  IKLLRHLDHENVIAIKD-IMPPPHREAFNDVYIVYELM---DTDLHQIIRSSQTLSDDHC 110

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
                   +GL ++H      V++RD K SN+LL+A                   N  L 
Sbjct: 111 QYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNA-------------------NCDL- 147

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLL 357
                K+ DFGLA+     +K    T  + T  Y APE ++     T+  DV+S G +  
Sbjct: 148 -----KICDFGLAR--TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA 200

Query: 358 EMLTGR 363
           E+L  +
Sbjct: 201 ELLGRK 206

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 62/244 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK----TLNHDGLQGHKEWLAEVNFLGDL 192
           +GEG +G V+K              TG  VA+K     ++ +G+      L E++ L  L
Sbjct: 9   IGEGTYGKVYKA---------RDKNTGKLVALKKTRLEMDEEGIPPTA--LREISLLQML 57

Query: 193 VHLN-LVKLIGYCIEDDQR-------LLVYEFMP---RGSLENHLFRRSLPLPWSIRMKI 241
                +V+L+   +E  +         LV+E++    +  ++++      PLP       
Sbjct: 58  SESIYIVRLL--DVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSF 115

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                KG+A  H+     V++RD K  N+L+D        K    +              
Sbjct: 116 MYQLLKGVAHCHK---HGVMHRDLKPQNLLVD--------KQKGLL-------------- 150

Query: 302 NAKLSDFGLAKDG--PEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLE 358
             K++D GL +    P    TH     + T  Y APE ++   H ++  D++S G +  E
Sbjct: 151 --KIADLGLGRAFSIPVKSYTH----EIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAE 204

Query: 359 MLTG 362
           M   
Sbjct: 205 MSRK 208

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 63/245 (25%), Positives = 94/245 (38%), Gaps = 48/245 (19%)

Query: 137 LGEGGFGCVFKGWIEENGT----APVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGD 191
           LGEG +G V K +    G       VK         K     G+ G H   L E+  + +
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           + H N++ L+   +E D   LV + M    L+  +  R + L  S    I L    GL  
Sbjct: 77  IKHENIMGLVDVYVEGDFINLVMDIM-ASDLKK-VVDRKIRLTESQVKCILLQILNGLNV 134

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH+      ++RD   +NI ++          G C                 K++DFGLA
Sbjct: 135 LHK---WYFMHRDLSPANIFIN--------SKGIC-----------------KIADFGLA 166

Query: 312 K--------DGPEGDKTHVSTRVMG----TYGYAAPEYVM-TGHLTSRSDVYSFGVVLLE 358
           +        D    D+T      M     T  Y APE +M         D++S G +  E
Sbjct: 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAE 226

Query: 359 MLTGR 363
           +LTG+
Sbjct: 227 LLTGK 231

Length = 335

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 42.7 bits (100), Expect = 4e-04
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 36/206 (17%)

Query: 184 AEVNFLGDLVHLNLVKLIGYCIED-DQRLLVYEFMPRGSLENHL-----FRRSLPLPWSI 237
           AE + L +  +  +V+L  Y  +D D    V +++P G + + L     F   L   +  
Sbjct: 50  AERDILAEADNEWVVRLY-YSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIA 108

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +  A+ +   + F+H         RD K  NIL+D         FG C  +    ++  
Sbjct: 109 ELTCAVESVHKMGFIH---------RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159

Query: 298 FQ--DYNAKLS-DFGLAKDGPE----GDKTH-------------VSTRVMGTYGYAAPEY 337
           +Q  D+  + S DF      P     GD+               ++  ++GT  Y APE 
Sbjct: 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEV 219

Query: 338 VMTGHLTSRSDVYSFGVVLLEMLTGR 363
           ++    T   D +S GV+L EML G+
Sbjct: 220 LLRTGYTQLCDWWSVGVILYEMLVGQ 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 60/246 (24%), Positives = 96/246 (39%), Gaps = 67/246 (27%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           ++    +GEG F  V K    + G            A+K +       H + L +VN L 
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGK---------YYAIKCMKK-----HFKSLEQVNNLR 46

Query: 191 DLV-------HLNLVKLIGYCIEDDQ--RL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           ++        H N+++LI   + D +  RL LV+E M   +L   +  R  PLP      
Sbjct: 47  EIQALRRLSPHPNILRLIE-VLFDRKTGRLALVFELM-DMNLYELIKGRKRPLPEKRVKS 104

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 K L  +H      + +RD K  NIL+                           D
Sbjct: 105 YMYQLLKSLDHMHRNG---IFHRDIKPENILIK--------------------------D 135

Query: 301 YNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV 355
              KL+DFG  +      P  +  ++STR      Y APE ++T G+   + D+++ G V
Sbjct: 136 DILKLADFGSCRGIYSKPPYTE--YISTR-----WYRAPECLLTDGYYGPKMDIWAVGCV 188

Query: 356 LLEMLT 361
             E+L+
Sbjct: 189 FFEILS 194

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 41.8 bits (98), Expect = 4e-04
 Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 41/233 (17%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G F  +FKG   E G       T   V +K L+       + +    + +  L H +
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKT--EVLLKVLDKSHRNYSESFFEAASMMSQLSHKH 60

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF-LHEE 255
           LV   G C+  D+ ++V E++  GSL+ +L +    +  S ++++    AK LA+ LH  
Sbjct: 61  LVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEV----AKQLAWALHFL 116

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG-----L 310
            ++ + + +    N+LL        G   F                  KLSD G     L
Sbjct: 117 EDKGLTHGNVCAKNVLLIREEDRKTGNPPFI-----------------KLSDPGISITVL 159

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTG 362
            K+        +  R+     +  PE +    +L+  +D +SFG  L E+ +G
Sbjct: 160 PKE-------ILLERI----PWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 39/210 (18%)

Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLPWSIRMKIALGAAKGLA 250
           +VKL  Y  +D   L  V +++P G + + L     F   L   +   +  A+ +   + 
Sbjct: 63  VVKLY-YSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG 121

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI---------YYGLFFNNMLFQD- 300
           F+H         RD K  NIL+D         FG C          YY     +   QD 
Sbjct: 122 FIH---------RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQK--GDHHRQDS 170

Query: 301 --YNAKLSDFGLAKDGP-EGDKTHVSTRVM-----GTYGYAAPEYVM-TGHLTSRSDVYS 351
              + + S+    +  P E  +     R +     GT  Y APE ++ TG+ T   D +S
Sbjct: 171 MEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWS 229

Query: 352 FGVVLLEMLTGRRSMDKNRPNG-EHNLVEW 380
            GV+L EML G+     + P   +  ++ W
Sbjct: 230 VGVILYEMLVGQPPFLADTPAETQLKVINW 259

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 44/168 (26%), Positives = 64/168 (38%), Gaps = 36/168 (21%)

Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI 261
           Y  +D   L LV E+ P G L + L R        +        A+ +  +H   +   +
Sbjct: 68  YAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDM---AQFYLAELVLAIHSVHQMGYV 124

Query: 262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH 321
           +RD K  N+L+D        + G                 + KL+DFG A      +K  
Sbjct: 125 HRDIKPENVLID--------RTG-----------------HIKLADFGSAA-RLTANKMV 158

Query: 322 VSTRVMGTYGYAAPEY--VMTGHLTSRSDV----YSFGVVLLEMLTGR 363
            S   +GT  Y APE    M G       V    +S GV+  EM+ GR
Sbjct: 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 47/238 (19%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEW-LAEVNF 188
           F    ++GEG +G V K   +E         T   VA+K   + +  +  KE  L E+  
Sbjct: 3   FEVLGVVGEGAYGVVLKCRHKE---------TKEIVAIKKFKDSEENEEVKETTLRELKM 53

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIALGA 245
           L  L   N+V+L        +  LV+E++ +  LE       +P    P  +R  I    
Sbjct: 54  LRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLE---LLEEMPNGVPPEKVRSYI-YQL 109

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            K + + H+     +++RD K  N+L+                     N++L      KL
Sbjct: 110 IKAIHWCHKND---IVHRDIKPENLLISH-------------------NDVL------KL 141

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
            DFG A++  EG   +  T  + T  Y +PE ++        D++S G +L E+  G+
Sbjct: 142 CDFGFARNLSEGSNANY-TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 65/272 (23%), Positives = 93/272 (34%), Gaps = 80/272 (29%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAE 185
           ++F+   LLG+G  G VF   +   GT  +        A+K L+   +    +    L E
Sbjct: 1   KHFKKIKLLGKGDVGRVF--LVRLKGTGKL-------FALKVLDKKEMIKRNKVKRVLTE 51

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIA 242
              L  L H  L  L      +    LV ++ P G L      +  P   L   +     
Sbjct: 52  QEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGEL--FRLLQRQPGKCLSEEV---AR 106

Query: 243 LGAAK---GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             AA+    L +LH      ++YRD K  NILL                          +
Sbjct: 107 FYAAEVLLALEYLHLLG---IVYRDLKPENILLH-------------------------E 138

Query: 300 DYNAKLSDFGLAK--------------DGPEGDKTH----------VSTRVM---GTYGY 332
             +  LSDF L+K               G      +           S R     GT  Y
Sbjct: 139 SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEY 198

Query: 333 AAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
            APE +   GH  S  D ++ G++L EML G 
Sbjct: 199 IAPEVISGDGH-GSAVDWWTLGILLYEMLYGT 229

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 41.4 bits (97), Expect = 6e-04
 Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 61/283 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLT-VAVKTLNHD-GLQGHKEWLAEVNFLGDLVH 194
           +G G FG V    I           TG+  V VK L  +   +   E+L + +    L H
Sbjct: 3   IGNGWFGKVLLSEI--------YTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH 54

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL------FRRSLPLPWSIRMKIALGAAKG 248
            N+++ +G C+E    LLV+E+   G L+++L       R S  L   +  ++A   A G
Sbjct: 55  PNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLL---LLQRMACEIAAG 111

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           +  +H+         +F  S++   A+R                 N  L  D   K+ D+
Sbjct: 112 VTHMHKH--------NFLHSDL---ALR-----------------NCFLTSDLTVKVGDY 143

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-------MTGHLTSRSDVYSFGVVLLEMLT 361
           G+     + D             + APE V       +T   T  S+V++ GV L E+  
Sbjct: 144 GIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELF- 202

Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS 404
                 +N      +L +    +   + +  +L  P+LE  +S
Sbjct: 203 ------ENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS 239

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 41.9 bits (98), Expect = 7e-04
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 11/105 (10%)

Query: 56  SRSKVDSSVSGTSTHYESKSTNDTSRDQPA-AAVISSTTTSNAESNSSTSKLEEELKVAS 114
           SRS   +  SG+    E+ ++ D+ R +    A  +   T+   +N   +   ++ KV  
Sbjct: 45  SRSTNSARRSGSKRDRETATSTDSGRTKSHEGAATTKQATTTPTTNVEVAPPPKKKKVTY 104

Query: 115 RLRKFTFN----------DLKLATRNFRPESLLGEGGFGCVFKGW 149
            L   +            D+ ++T+ F+  SLLGEG FG V + W
Sbjct: 105 ALPNQSREEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAW 149

Length = 467

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 41.1 bits (96), Expect = 8e-04
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 49/251 (19%)

Query: 185 EVNFLGDLVHLNLVKLI-GYCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIA 242
           E   L  L H N+V     +  ED    +V  F   G L + L  ++   LP +  ++  
Sbjct: 49  EAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWF 108

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A  L +LHE+    +++RD KT N+ L                      N++     
Sbjct: 109 VQIAMALQYLHEKH---ILHRDLKTQNVFLTR-------------------TNII----- 141

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ D G+A+     ++  +++ ++GT  Y +PE         +SDV++ G  + EM T 
Sbjct: 142 -KVGDLGIAR--VLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATL 198

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
           + + +    N   +LV             YR+I+ +L        + +  +L A  LS+ 
Sbjct: 199 KHAFNAKDMN---SLV-------------YRIIEGKLP-PMPKDYSPELGELIATMLSKR 241

Query: 423 PKARPLMSEVV 433
           P+ RP +  ++
Sbjct: 242 PEKRPSVKSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 41.1 bits (96), Expect = 8e-04
 Identities = 67/246 (27%), Positives = 96/246 (39%), Gaps = 66/246 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDLV-H 194
           +G+G +G V+K   +++G+           AVK L  D +    E + AE N L  L  H
Sbjct: 30  IGKGTYGKVYKVTNKKDGS---------LAAVKIL--DPISDVDEEIEAEYNILQSLPNH 78

Query: 195 LNLVKLIGYCIEDD-----QRLLVYEFMPRGS---LENHLFRRSLPLPWSIRMKIALGAA 246
            N+VK  G   + D     Q  LV E    GS   L   L      L  ++   I  GA 
Sbjct: 79  PNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGAL 138

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            GL  LH      +I+RD K +NILL                           +   KL 
Sbjct: 139 LGLQHLHNNR---IIHRDVKGNNILLTT-------------------------EGGVKLV 170

Query: 307 DFGLAKDGPEGDKTHVSTRV-----MGTYGYAAPEYVMTGH-----LTSRSDVYSFGVVL 356
           DFG++           STR+     +GT  + APE +           +R DV+S G+  
Sbjct: 171 DFGVSAQ-------LTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITA 223

Query: 357 LEMLTG 362
           +E+  G
Sbjct: 224 IELGDG 229

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 68/242 (28%), Positives = 94/242 (38%), Gaps = 58/242 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLAEVNFLGDLV- 193
           +G+G +G VFK   ++NG+           AVK L+  HD     +E  AE N L  L  
Sbjct: 26  IGKGTYGKVFKVLNKKNGS---------KAAVKILDPIHDI---DEEIEAEYNILKALSD 73

Query: 194 HLNLVKLIG-YCIED----DQRLLVYEFMPRGS---LENHLFRRSLPLPWSIRMKIALGA 245
           H N+VK  G Y  +D    DQ  LV E    GS   L     +R   +   I   I   A
Sbjct: 74  HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEA 133

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             GL  LH       I+RD K +NILL                           +   KL
Sbjct: 134 LMGLQHLHVNK---TIHRDVKGNNILLTT-------------------------EGGVKL 165

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----MTGHLTSRSDVYSFGVVLLEML 360
            DFG++               +GT  + APE +     +     +R DV+S G+  +E+ 
Sbjct: 166 VDFGVSAQ--LTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG 223

Query: 361 TG 362
            G
Sbjct: 224 DG 225

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 48/197 (24%)

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A+G+ FL   A +  ++RD    N+LL        GK                     K+
Sbjct: 247 ARGMEFL---ASKNCVHRDLAARNVLL------AQGKI-------------------VKI 278

Query: 306 SDFGLAKDGPEGDKTHVST-RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
            DFGLA+D    D  +VS         + APE +     T+ SDV+S+G++L E+ +   
Sbjct: 279 CDFGLARDIMH-DSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS--- 334

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                       L     P +     FY  I             Q+   +   C + +P+
Sbjct: 335 ------------LGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPE 382

Query: 425 ARPL---MSEVVEALKP 438
            RP    +S++VE+L P
Sbjct: 383 KRPSFLHLSDIVESLLP 399

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 38/180 (21%)

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-----RSLPLPWSIRM 239
           E   L  L H  +VK     +E D   ++ E+     L+  L       ++L        
Sbjct: 52  EAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEW 111

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            I L    G+ ++H+   R +++RD K  NI L                     NN+L  
Sbjct: 112 FIQL--LLGVHYMHQ---RRILHRDLKAKNIFLK--------------------NNLL-- 144

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
               K+ DFG+++         ++T   GT  Y +PE +      S+SD++S G +L EM
Sbjct: 145 ----KIGDFGVSR--LLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 70/305 (22%), Positives = 110/305 (36%), Gaps = 65/305 (21%)

Query: 78  DTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLL 137
            ++ D P+ A  S  +  + +     +     L  A    K   +D  LA  +FR    L
Sbjct: 103 ASAGDGPSGAEDSDASHLDFDEAPPDAAGPVPLAQA----KLKHDDEFLA--HFRVIDDL 156

Query: 138 GEGGFG----CVFKGWIEE-------NGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV 186
             G FG    C  +   EE       N T   KP     +A +           E   E+
Sbjct: 157 PAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLE--NEI 214

Query: 187 NFLGDLVHLNLVKL--------IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
             LG L H N++K+          Y I       +Y FM   + +     +  PL    R
Sbjct: 215 LALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFD----WKDRPLLKQTR 270

Query: 239 --MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
             MK  L A   + ++H+   + +I+RD K  NI L+                       
Sbjct: 271 AIMKQLLCA---VEYIHD---KKLIHRDIKLENIFLNC---------------------- 302

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
              D    L DFG A    E ++       +GT    +PE +        +D++S G++L
Sbjct: 303 ---DGKIVLGDFGTAMPF-EKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358

Query: 357 LEMLT 361
           L+ML+
Sbjct: 359 LDMLS 363

Length = 501

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 44/229 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           LGEG +  V+KG  + NG           VA+K +     +G     + E + L  L H 
Sbjct: 13  LGEGSYATVYKGKSKVNGK---------LVALKVIRLQEEEGTPFTAIREASLLKGLKHA 63

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
           N+V L       +   LV+E++    L  ++ +    L P ++++ +     +GL+++H 
Sbjct: 64  NIVLLHDIIHTKETLTLVFEYV-HTDLCQYMDKHPGGLHPENVKLFL-FQLLRGLSYIH- 120

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             +R +++RD K  N+L+      + G+                     KL+DFGLA+  
Sbjct: 121 --QRYILHRDLKPQNLLI-----SDTGEL--------------------KLADFGLAR-- 151

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
            +   +H  +  + T  Y  P+ ++ +   ++  D++  G + +EM+ G
Sbjct: 152 AKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQG 200

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 34/118 (28%)

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   ++ 
Sbjct: 129 RGLKYIHSAG---IIHRDLKPSNVAVN-------------------------EDCELRIL 160

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+L G+
Sbjct: 161 DFGLARQADDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 74/329 (22%), Positives = 121/329 (36%), Gaps = 72/329 (21%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNF 188
           ++ + ++G+G +G V          + +   TG  VA+K +N   + +      L E+  
Sbjct: 2   YKIQEVIGKGSYGVV---------CSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKL 52

Query: 189 LGDLVHLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
           L  L H ++V++    +   +R      +V+E M   S  + + + +  L          
Sbjct: 53  LRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHHQFFLY 110

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              + L ++H      V +RD K  NIL +A                         D   
Sbjct: 111 QLLRALKYIHTAN---VFHRDLKPKNILANA-------------------------DCKL 142

Query: 304 KLSDFGLAK----DGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLL 357
           K+ DFGLA+    D P        T  + T  Y APE   +     T   D++S G +  
Sbjct: 143 KICDFGLARVAFNDTP---TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFA 199

Query: 358 EMLTGRRSMDKNRPNGEH------NLVEWARPHLGER------RRFYRLIDPRLEGHFSI 405
           E+LTG+        N  H      +L+    P    R      RR+   +  +    FS 
Sbjct: 200 EVLTGKPLFPGK--NVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQ 257

Query: 406 K---GAQKAAQLAAHCLSRDPKARPLMSE 431
           K       A +L    L+ DPK RP   E
Sbjct: 258 KFPNADPLALRLLERLLAFDPKDRPTAEE 286

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 34/127 (26%)

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL ++H      V++RD K  N+L++A                         D   K+ D
Sbjct: 117 GLKYIHSAN---VLHRDLKPGNLLVNA-------------------------DCELKICD 148

Query: 308 FGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           FGLA+   + P  +   + T  + T  Y APE +++    +++ DV+S G +L E+L GR
Sbjct: 149 FGLARGFSENPGENAGFM-TEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GR 206

Query: 364 RSMDKNR 370
           + + K +
Sbjct: 207 KPVFKGK 213

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G +G V+K              TG   A+K +  +  +       E+  + D  H N
Sbjct: 17  IGSGTYGDVYKA---------RNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN 67

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V   G  +  D+  +  EF   GSL++ ++  + PL  S    ++    +GL +LH + 
Sbjct: 68  IVAYFGSYLRRDKLWICMEFCGGGSLQD-IYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126

Query: 257 ERPVIYRDFKTSNILL 272
           +   ++RD K +NILL
Sbjct: 127 K---MHRDIKGANILL 139

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	511
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
PTZ00284	467	protein kinase; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	99.98
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.98
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.92
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.92
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.92
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.91
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.9
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.88
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.87
PRK10345	210	hypothetical protein; Provisional	99.86
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.86
PRK12274	218	serine/threonine protein kinase; Provisional	99.86
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.86
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.86
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.85
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.84
PRK14879	211	serine/threonine protein kinase; Provisional	99.79
smart00090	237	RIO RIO-like kinase.	99.79
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.78
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.78
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.76
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.71
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.68
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.67
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.65
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.51
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.48
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.47
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.41
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.41
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.37
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.34
KOG1243	690	consensus Protein kinase [General function predict	99.28
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.26
KOG3087	229	consensus Serine/threonine protein kinase [General	99.25
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.18
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.03
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.95
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.89
COG4248	637	Uncharacterized protein with protein kinase and he	98.74
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.7
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.66
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.57
PRK09902	216	hypothetical protein; Provisional	98.51
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.5
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.45
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.44
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.38
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.32
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.27
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.19
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.18
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.17
PF01636	239	APH: Phosphotransferase enzyme family This family	98.14
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.98
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.96
PLN02876	822	acyl-CoA dehydrogenase	97.92
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.86
PRK10593	297	hypothetical protein; Provisional	97.85
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.83
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.52
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.46
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.42
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.36
PRK05231	319	homoserine kinase; Provisional	97.34
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.28
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.21
KOG2270	520	consensus Serine/threonine protein kinase involved	97.21
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.07
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.87
PLN02236	344	choline kinase	96.77
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.76
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.53
KOG1236	565	consensus Predicted unusual protein kinase [Genera	96.36
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.09
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	95.97
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.64
PLN02756	418	S-methyl-5-thioribose kinase	95.58
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.43
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	95.4
PRK12396	409	5-methylribose kinase; Reviewed	95.1
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.77
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.6
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.5
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.38
PRK11768	325	serine/threonine protein kinase; Provisional	93.66
PRK06148	1013	hypothetical protein; Provisional	92.76
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	92.62
PHA03111	444	Ser/Thr kinase; Provisional	92.31
PTZ00384	383	choline kinase; Provisional	92.09

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-54  Score=430.70  Aligned_cols=290  Identities=58%  Similarity=0.995  Sum_probs=252.4

Q ss_pred             cccccChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC
Q 010432          115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH  194 (511)
Q Consensus       115 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H  194 (511)
                      ....|++.++..++++|....+||+|+||.||+|...+          |..||||++.........+|.+|+.+|.+++|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~----------~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H  130 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD----------GTVVAVKRLSSNSGQGEREFLNEVEILSRLRH  130 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC----------CCEEEEEEecCCCCcchhHHHHHHHHHhcCCC
Confidence            34579999999999999999999999999999999864          47899998877654314569999999999999


Q ss_pred             CCcceEeeEEEeCC-eEEEEEEccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       195 ~nIv~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      ||||+|+|||.+.+ ..+||+||+++|+|.++|+.... .++|..+++|+.++|.||+|||....++||||||||+||||
T Consensus       131 ~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL  210 (361)
T KOG1187|consen  131 PNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL  210 (361)
T ss_pred             cCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence            99999999999988 59999999999999999987665 89999999999999999999999887899999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      |                         +++.+||+|||+|+..... .....+...||.+|+|||++..+..+.|+|||||
T Consensus       211 D-------------------------~~~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySF  264 (361)
T KOG1187|consen  211 D-------------------------EDFNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSF  264 (361)
T ss_pred             C-------------------------CCCCEEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccc
Confidence            9                         5899999999999776541 1211221179999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccC-CCCCH-HHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE-GHFSI-KGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ||+|+||+||+.+.+...+.....+..|+...+.+. .+.+++|+.+. ..+.. .....+..+..+|++.+|.+||+|.
T Consensus       265 GVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~  343 (361)
T KOG1187|consen  265 GVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMS  343 (361)
T ss_pred             hHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHH
Confidence            999999999999998766566666888987776665 78899999987 56664 5778899999999999999999999


Q ss_pred             HHHHHhcCCCC
Q 010432          431 EVVEALKPLPN  441 (511)
Q Consensus       431 eil~~L~~l~~  441 (511)
                      +|++.|+.+..
T Consensus       344 ~Vv~~L~~~~~  354 (361)
T KOG1187|consen  344 QVVKELEGILS  354 (361)
T ss_pred             HHHHHHHhhcc
Confidence            99999965543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-53  Score=409.02  Aligned_cols=258  Identities=26%  Similarity=0.379  Sum_probs=210.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-------HHHHHHHHHHHhCCCCCCcce
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-------HKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-------~~~~~~E~~il~~l~H~nIv~  199 (511)
                      ..+.|.+.+.||+|+||.|-+|..+.         ||+.||||++++.....       ...+.+|++||++|+|||||+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~---------tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~  240 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKK---------TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVR  240 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcc---------cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEE
Confidence            45678889999999999999998765         89999999998653321       223579999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ++++|...+..||||||+.||+|.+++..++ .+.+.....++.|++.||.|||++|   |+||||||+|||+....   
T Consensus       241 ~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~---  313 (475)
T KOG0615|consen  241 IKDFFEVPDSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDA---  313 (475)
T ss_pred             EeeeeecCCceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCC---
Confidence            9999999999999999999999999997653 6788888999999999999999999   99999999999998532   


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC---CCccccchhHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVL  356 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~---~~~~~DIwSlGvil  356 (511)
                                         ++..+||+|||+|+..+...   ...+.|||+.|.|||++.+..   +..++||||+||||
T Consensus       314 -------------------e~~llKItDFGlAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvL  371 (475)
T KOG0615|consen  314 -------------------EDCLLKITDFGLAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVL  371 (475)
T ss_pred             -------------------cceEEEecccchhhccccce---ehhhhcCCccccChhheecCCeecccchheeeeccceE
Confidence                               36789999999999886543   355689999999999998654   34488999999999


Q ss_pred             HHHHhCCCCCCCCCCCC-chhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNG-EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |-+|+|.+||....... ....+...+.              .+........+++..+||.+||..||++|||+.|+|++
T Consensus       372 fvcLsG~pPFS~~~~~~sl~eQI~~G~y--------------~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  372 FVCLSGYPPFSEEYTDPSLKEQILKGRY--------------AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             EEEeccCCCcccccCCccHHHHHhcCcc--------------cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            99999999998654322 1111111110              01122334567899999999999999999999999985


Q ss_pred             h
Q 010432          436 L  436 (511)
Q Consensus       436 L  436 (511)
                      -
T Consensus       438 p  438 (475)
T KOG0615|consen  438 P  438 (475)
T ss_pred             h
Confidence            4

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-53  Score=401.87  Aligned_cols=251  Identities=26%  Similarity=0.402  Sum_probs=210.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +++.++.||+|..|+|||++|+.         |++.+|+|++.... ....+++.+|++|+++.+||+||.+||+|..+.
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~---------t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~  150 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKP---------TGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG  150 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcC---------CCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence            45556789999999999999986         78899999995443 234567899999999999999999999999988


Q ss_pred             -eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          209 -QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       209 -~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       .+.|+||||++|+|..++..- +.+++...-.|+.+|++||.|||. ++   ||||||||+|||+..            
T Consensus       151 ~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNs------------  214 (364)
T KOG0581|consen  151 EEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNS------------  214 (364)
T ss_pred             ceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeecc------------
Confidence             599999999999999998544 579999999999999999999996 66   999999999999994            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                   .+.|||||||.++.+.+.    ...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||
T Consensus       215 -------------kGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~  277 (364)
T KOG0581|consen  215 -------------KGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPY  277 (364)
T ss_pred             -------------CCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCC
Confidence                         888999999999987664    356689999999999999999999999999999999999999999


Q ss_pred             CCCCC--CCchhHHHhhhhhhccccccccccCCccCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          367 DKNRP--NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI-KGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       367 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ....+  .....+..+             +++.. .+..+. .+++++++|+..||++||.+||++.++++|-
T Consensus       278 ~~~~~~~~~~~~Ll~~-------------Iv~~p-pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp  336 (364)
T KOG0581|consen  278 PPPNPPYLDIFELLCA-------------IVDEP-PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP  336 (364)
T ss_pred             CCcCCCCCCHHHHHHH-------------HhcCC-CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence            76422  112222221             22211 122222 3678999999999999999999999999853

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.4e-53  Score=423.79  Aligned_cols=249  Identities=27%  Similarity=0.437  Sum_probs=213.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..|...++||+|||+.||.+++..         +|..||+|++.+...   ...+.+.+|++|.+.|+|||||+++++|+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~---------tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE   88 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLD---------TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE   88 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcC---------CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee
Confidence            569999999999999999999866         788999999987433   33467889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+++|||+|+|..++|..++. +...+++.+++.++.||+.||.|||+++   |||||||..|+||+            
T Consensus        89 Ds~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~------------  152 (592)
T KOG0575|consen   89 DSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLN------------  152 (592)
T ss_pred             cCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeec------------
Confidence            9999999999999999999986 4568999999999999999999999999   99999999999999            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   ++.+|||+|||||..+......  ..+.||||.|+|||++....++..+||||+|||||-||+|++|
T Consensus       153 -------------~~~~VKIgDFGLAt~le~~~Er--k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PP  217 (592)
T KOG0575|consen  153 -------------ENMNVKIGDFGLATQLEYDGER--KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPP  217 (592)
T ss_pred             -------------CcCcEEecccceeeeecCcccc--cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCC
Confidence                         5889999999999988754332  3458999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |...........+...              +.    .++...+.++++||.++|+.||.+|||+++|+.+
T Consensus       218 Fetk~vkety~~Ik~~--------------~Y----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  218 FETKTVKETYNKIKLN--------------EY----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             cccchHHHHHHHHHhc--------------Cc----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            9865332222111111              11    1122346788999999999999999999999975

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8e-53  Score=405.36  Aligned_cols=255  Identities=28%  Similarity=0.464  Sum_probs=204.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..+|.+.+.||+|+||+||+|+++.         ++..||||.+.+...  +..+.+..|+.||+.|+|||||+|++++.
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~---------~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~   79 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKK---------SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE   79 (429)
T ss_pred             cccceehhhccCcceEEEEEeEecc---------CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe
Confidence            3578889999999999999999987         567999999987743  33456789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++.+|||||||.||||.+||++++ .+++..++.++.|||.||++||+++   ||||||||+||||+....        
T Consensus        80 ~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~--------  147 (429)
T KOG0595|consen   80 DDDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTAR--------  147 (429)
T ss_pred             cCCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCC--------
Confidence            9999999999999999999997654 7999999999999999999999999   999999999999986311        


Q ss_pred             eeecccccccccccc--CceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          286 CIYYGLFFNNMLFQD--YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~--~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                   .+  ..+||+|||+|+.+....   ...+.||++.|||||++..+.|+.|+|+||+|+|||+|++|+
T Consensus       148 -------------~~~~~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~  211 (429)
T KOG0595|consen  148 -------------NDTSPVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGK  211 (429)
T ss_pred             -------------CCCCceEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCC
Confidence                         12  679999999999987543   245689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      .||+.........   +...    ..        .+....+...+..+.+|+...|+.+|.+|-++.+-..
T Consensus       212 ~Pf~a~t~~eL~~---~~~k----~~--------~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  212 PPFDAETPKELLL---YIKK----GN--------EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD  267 (429)
T ss_pred             CCccccCHHHHHH---HHhc----cc--------cccCchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence            9998654322111   1110    00        0111122222334456777777777777766655443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-52  Score=397.99  Aligned_cols=263  Identities=29%  Similarity=0.374  Sum_probs=214.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|+++++||+|+||+||.++.++         |++.||+|++++.....   .+....|..||.+++||+||+++..|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~d---------t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF   94 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKD---------TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF   94 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcc---------cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec
Confidence            3579999999999999999999875         78899999998765432   35578999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ++.+.+|||+||+.||.|..+|.+. ..+++..+..++.+|+.||.|||+++   ||||||||+||||+           
T Consensus        95 Qt~~kLylVld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd-----------  159 (357)
T KOG0598|consen   95 QTEEKLYLVLDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLD-----------  159 (357)
T ss_pred             ccCCeEEEEEeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeec-----------
Confidence            9999999999999999999999654 57999999999999999999999999   99999999999999           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .+++++|+||||++........  ..++|||+.|||||++.+..|+..+|+|||||++|||++|.+
T Consensus       160 --------------~~GHi~LtDFgL~k~~~~~~~~--t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~p  223 (357)
T KOG0598|consen  160 --------------EQGHIKLTDFGLCKEDLKDGDA--TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKP  223 (357)
T ss_pred             --------------CCCcEEEeccccchhcccCCCc--cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCC
Confidence                          5899999999999965443322  344899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCCCCc
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD  444 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~~~  444 (511)
                      ||.......      +.......+           ....+.-.+.++++|+.++|..||++|.....=...++..+.+..
T Consensus       224 PF~~~~~~~------~~~~I~~~k-----------~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  224 PFYAEDVKK------MYDKILKGK-----------LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             CCcCccHHH------HHHHHhcCc-----------CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence            998654322      111111111           011111235788999999999999999743333333555655555


Q ss_pred             CCC
Q 010432          445 MAS  447 (511)
Q Consensus       445 ~~~  447 (511)
                      +.+
T Consensus       287 inW  289 (357)
T KOG0598|consen  287 INW  289 (357)
T ss_pred             CCH
Confidence            543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-51  Score=410.76  Aligned_cols=255  Identities=35%  Similarity=0.583  Sum_probs=210.9

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcE-EEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT-VAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~-vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +.+.+.||+|+||+||+|.++           |.. ||||++.......  .+.|.+|+.+|.+|+|||||+|+|+|.+.
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~-----------g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~  111 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWR-----------GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP  111 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeC-----------CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            344456999999999999995           445 9999998754332  35899999999999999999999999988


Q ss_pred             C-eEEEEEEccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 D-QRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 ~-~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      . ..+|||||+++|+|.+++.. ....+++..++.|+.|||.||.|||++++  ||||||||+||||+.           
T Consensus       112 ~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~-----------  178 (362)
T KOG0192|consen  112 PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDL-----------  178 (362)
T ss_pred             CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcC-----------
Confidence            7 79999999999999999987 47789999999999999999999999874  999999999999994           


Q ss_pred             eeeccccccccccccC-ceeeecCCCcccCCCCCcceeeeeccccccccCCcccc--cCCCCccccchhHHHHHHHHHhC
Q 010432          286 CIYYGLFFNNMLFQDY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~-~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DIwSlGvil~elltg  362 (511)
                                    +. ++||||||+++......  ...+...||+.|||||++.  ...|+.|+||||||++||||+||
T Consensus       179 --------------~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~  242 (362)
T KOG0192|consen  179 --------------KGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG  242 (362)
T ss_pred             --------------CCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHC
Confidence                          54 89999999998765432  1233468999999999999  56999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      +.||.......   ..             ..++....+..++..+++.+..||.+||+.||..||++.+|+..|+.+..
T Consensus       243 ~~Pf~~~~~~~---~~-------------~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  243 EIPFEDLAPVQ---VA-------------SAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCCCCCCHHH---HH-------------HHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            99998654311   11             11111122333344467889999999999999999999999999986643

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=8.7e-52  Score=382.94  Aligned_cols=267  Identities=27%  Similarity=0.335  Sum_probs=214.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      +.|+.+.++|+|+||+||+|++++         ||+.||||++......  -.+-.+||+++|++|+|+|+|.|+.+|..
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~---------TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr   72 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKD---------TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR   72 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCC---------cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh
Confidence            357888899999999999999887         8999999999755332  23457899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ...++||+|||+. ++.+-|.+....++...+..|+.|++.|+.|+|+++   ||||||||+||||+             
T Consensus        73 krklhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit-------------  135 (396)
T KOG0593|consen   73 KRKLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILIT-------------  135 (396)
T ss_pred             cceeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEe-------------
Confidence            9999999999966 666667777778999999999999999999999999   99999999999999             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||||||+|+.+.....  ..+..+.|.+|+|||++.+ ..|+..+||||+||++.||++|.+.
T Consensus       136 ------------~~gvvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL  201 (396)
T KOG0593|consen  136 ------------QNGVVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPL  201 (396)
T ss_pred             ------------cCCcEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcC
Confidence                        488899999999998874332  3566789999999999987 6899999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhc--------cccccccccCCccCCC--CC---HHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLG--------ERRRFYRLIDPRLEGH--FS---IKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~---~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |.+..+.+..-.+......+.        ....+..+.-|.....  ..   ...+.-+.+|+..||+.||++|++.+++
T Consensus       202 ~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql  281 (396)
T KOG0593|consen  202 WPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL  281 (396)
T ss_pred             CCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH
Confidence            998876655443333222211        1111111111111111  11   1234578899999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +.+
T Consensus       282 l~H  284 (396)
T KOG0593|consen  282 LHH  284 (396)
T ss_pred             hcC
Confidence            863

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.8e-52  Score=379.01  Aligned_cols=255  Identities=24%  Similarity=0.338  Sum_probs=206.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEee-EEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIG-YCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~-~~~  205 (511)
                      .+|+++++||+|+||+||++.+..         +|..||.|.++.....  ....+..|+.+|++|+|||||++++ .|.
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~---------~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~   89 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLL---------DGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI   89 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeecc---------CcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh
Confidence            468888999999999999999876         6889999999865443  3356889999999999999999998 455


Q ss_pred             eCCe-EEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecccCCCcEEeccccccc
Q 010432          206 EDDQ-RLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLHEEAERP--VIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~~-~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~--iiHrDLKp~NILl~~~~~~~  279 (511)
                      ++.. ++||||||.+|||.+.+.   .....+++..+++++.|++.||.++|..- ++  |+||||||.||+|+      
T Consensus        90 ~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~------  162 (375)
T KOG0591|consen   90 EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLT------  162 (375)
T ss_pred             ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEc------
Confidence            5555 789999999999999885   34567999999999999999999999843 33  99999999999999      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+||||++.+.....  .....+|||.||+||.+.+.+|+.++||||+||++|||
T Consensus       163 -------------------~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM  221 (375)
T KOG0591|consen  163 -------------------ANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM  221 (375)
T ss_pred             -------------------CCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence                               478899999999998765433  35568999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +.-+.||.+...   ..+...+.             .-.+..-.....+.++..||..|+..||..||+...++..+
T Consensus       222 caL~~PF~g~n~---~~L~~KI~-------------qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  222 CALQSPFYGDNL---LSLCKKIE-------------QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             HhcCCCcccccH---HHHHHHHH-------------cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence            999999987621   11111111             00111111245678999999999999999999855554443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-50  Score=401.67  Aligned_cols=261  Identities=30%  Similarity=0.454  Sum_probs=215.6

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      .+.+..+.+.+++.||+|.||.||+|++..          ...||+|.++..... .+.|.+|+++|++|+|+|||+|++
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~----------~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~g  268 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGEVWLGKWNG----------STKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYG  268 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccceEEEEEEcC----------CCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEE
Confidence            333444556667789999999999999964          337999999876433 467999999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +|..++.++||||||+.|+|.++|.. .+..+.....+.++.|||+||+||++++   +|||||.++||||+        
T Consensus       269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~--------  337 (468)
T KOG0197|consen  269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVD--------  337 (468)
T ss_pred             EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeec--------
Confidence            99998899999999999999999986 4567899999999999999999999999   99999999999999        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ++..+||+|||||+...+ +.+.......-++.|.|||.+..+.|+.|||||||||+||||+|
T Consensus       338 -----------------~~~~vKIsDFGLAr~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT  399 (468)
T KOG0197|consen  338 -----------------EDLVVKISDFGLARLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFT  399 (468)
T ss_pred             -----------------cCceEEEcccccccccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhc
Confidence                             578899999999995444 33333444445789999999999999999999999999999999


Q ss_pred             -CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          362 -GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       362 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                       |+.||......   ++              .+.++...+-..|..|+..+.+||..||+.+|++||||..+...|+.+.
T Consensus       400 ~G~~py~~msn~---ev--------------~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  400 YGRVPYPGMSNE---EV--------------LELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             cCCCCCCCCCHH---HH--------------HHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence             77777654321   11              1222333333445567899999999999999999999999998887653

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-50  Score=393.83  Aligned_cols=267  Identities=26%  Similarity=0.341  Sum_probs=215.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHH--HHHHHHHHhCCC-CCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--WLAEVNFLGDLV-HLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~--~~~E~~il~~l~-H~nIv~l~~~  203 (511)
                      .-++|.++++||.|+||.||+|+.+.         +|..||||.++..-.. .++  -+||+..|++|+ |||||+|.++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~---------~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Ev   77 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKE---------TGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEV   77 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecC---------CCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHH
Confidence            34678999999999999999999876         6779999999876433 233  368999999998 9999999999


Q ss_pred             EEeCC-eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          204 CIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       204 ~~~~~-~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +.+.+ .+++||||| ..+|++++..+...+++..++.|+.||+.||+|+|.+|   +.||||||+|||+..        
T Consensus        78 i~d~~~~L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~--------  145 (538)
T KOG0661|consen   78 IRDNDRILYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISG--------  145 (538)
T ss_pred             hhccCceEeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecc--------
Confidence            99988 999999999 45999999988889999999999999999999999999   999999999999983        


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHHHh
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ...+||+|||+||.......   .|..+-|.+|+|||++. .+-|+.++||||+|||++|+.+
T Consensus       146 -----------------~~~iKiaDFGLARev~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~s  205 (538)
T KOG0661|consen  146 -----------------NDVIKIADFGLAREVRSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYS  205 (538)
T ss_pred             -----------------cceeEecccccccccccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHH
Confidence                             66799999999998766443   45678899999999886 5678999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhh-----hcccccccccc--------CCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPH-----LGERRRFYRLI--------DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      -++.|.+..+.+....+-.+...     +.+...+-..+        ...+..-++ .++.++.+||.+||.+||++|||
T Consensus       206 LrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpT  284 (538)
T KOG0661|consen  206 LRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPT  284 (538)
T ss_pred             hcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCcc
Confidence            99999987765443222211111     11101111111        111111222 26788999999999999999999


Q ss_pred             HHHHHHHh
Q 010432          429 MSEVVEAL  436 (511)
Q Consensus       429 ~~eil~~L  436 (511)
                      |.+++++-
T Consensus       285 A~~al~~p  292 (538)
T KOG0661|consen  285 ASQALQHP  292 (538)
T ss_pred             HHHHhcCc
Confidence            99999853

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-49  Score=390.22  Aligned_cols=254  Identities=26%  Similarity=0.359  Sum_probs=212.3

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCC-CCCCcceEe
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      ....+|..++.||+|+|++|++|+.+.         +++.||||++.+.-...   .+-+.+|-.+|.+| .||.||+||
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~---------t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy  140 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKA---------TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLY  140 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecC---------CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEE
Confidence            345689999999999999999999876         78899999997653322   23467899999999 899999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ..|+++..+|+|+||+++|+|.++|.+. +.|++..++.++.+|+.||+|||++|   ||||||||+||||+        
T Consensus       141 ~TFQD~~sLYFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd--------  208 (604)
T KOG0592|consen  141 FTFQDEESLYFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLD--------  208 (604)
T ss_pred             EEeecccceEEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEc--------
Confidence            9999999999999999999999999665 57999999999999999999999999   99999999999999        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc---------e--eeeeccccccccCCcccccCCCCccccch
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---------H--VSTRVMGTYGYAAPEYVMTGHLTSRSDVY  350 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---------~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DIw  350 (511)
                                       +++++||+|||.|+.+......         .  ....++||..|.+||+|.....+..+|||
T Consensus       209 -----------------~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiW  271 (604)
T KOG0592|consen  209 -----------------KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLW  271 (604)
T ss_pred             -----------------CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchH
Confidence                             5999999999999976542221         0  12458999999999999999999999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      +||||||+|+.|.+||.+.++.-.                +.+++.  +.-.|+..+++.+.+|+.++|..||.+|+++.
T Consensus       272 AlGCilyQmlaG~PPFra~Neyli----------------FqkI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~  333 (604)
T KOG0592|consen  272 ALGCILYQMLAGQPPFRAANEYLI----------------FQKIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQ  333 (604)
T ss_pred             HHHHHHHHHhcCCCCCccccHHHH----------------HHHHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHH
Confidence            999999999999999986543211                111211  11123334458899999999999999999998


Q ss_pred             HHHHH
Q 010432          431 EVVEA  435 (511)
Q Consensus       431 eil~~  435 (511)
                      +|.+|
T Consensus       334 qIk~H  338 (604)
T KOG0592|consen  334 QIKAH  338 (604)
T ss_pred             HHhhC
Confidence            87764

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.4e-49  Score=387.06  Aligned_cols=270  Identities=25%  Similarity=0.308  Sum_probs=216.5

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ...+.|+.+++||+|.||.||+|++..         +|+.||+|.+..+..  .......|||.||++|+|||||+|.+.
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~---------tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~ei  184 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLE---------TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEI  184 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecc---------cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeE
Confidence            345678899999999999999999876         788999999987653  334557899999999999999999998


Q ss_pred             EEeC--CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ..+.  ..+|||+|||+. ||.-++......|++.++..|+.||+.||+|||+++   |+|||||.+||||+        
T Consensus       185 vt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLid--------  252 (560)
T KOG0600|consen  185 VTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILID--------  252 (560)
T ss_pred             EEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEc--------
Confidence            8876  689999999966 999999887788999999999999999999999999   99999999999999        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~ell  360 (511)
                                       +++.+||+|||||+.+....... .+..+-|.+|+|||+++|. .|+.++|+||.||||.||+
T Consensus       253 -----------------n~G~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~  314 (560)
T KOG0600|consen  253 -----------------NNGVLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELF  314 (560)
T ss_pred             -----------------CCCCEEeccccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHH
Confidence                             58899999999999766544332 4556779999999999864 7999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccc-cc---c--ccccCC------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGER-RR---F--YRLIDP------RLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~---~--~~~~~~------~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      +|++.|.+..+......+-..+..-.+. +.   +  .....+      .+... ....+....+|+..||..||.+|.|
T Consensus       315 ~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~t  393 (560)
T KOG0600|consen  315 LGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGT  393 (560)
T ss_pred             cCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCcccccc
Confidence            9999999887655544443332211110 00   0  011111      01111 1123567889999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      |.++|+.
T Consensus       394 A~~aL~s  400 (560)
T KOG0600|consen  394 ASSALQS  400 (560)
T ss_pred             HHHHhcC
Confidence            9999874

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=7.8e-49  Score=389.24  Aligned_cols=266  Identities=26%  Similarity=0.336  Sum_probs=210.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEee
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      ...++|+++++||+|+||.||+|+-+.         ||..||+|++++.....   .+.+..|-.+|...++++||+||.
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~---------Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyY  208 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKD---------TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYY  208 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEcc---------CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEE
Confidence            346799999999999999999998765         89999999999875433   345778999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .|++.+++||||||++|||+..+|.+. ..|++..+..++.+++.|++.||..|   +|||||||+|+|||.        
T Consensus       209 sFQD~~~LYLiMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~--------  276 (550)
T KOG0605|consen  209 SFQDKEYLYLIMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDA--------  276 (550)
T ss_pred             EecCCCeeEEEEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecC--------
Confidence            999999999999999999999999655 47999999999999999999999999   999999999999994        


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCC----------------------CCcc--------------------
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE----------------------GDKT--------------------  320 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~----------------------~~~~--------------------  320 (511)
                                       .+++||+||||+.-+..                      .+..                    
T Consensus       277 -----------------~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  339 (550)
T KOG0605|consen  277 -----------------KGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKR  339 (550)
T ss_pred             -----------------CCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHh
Confidence                             78888888888852210                      0000                    


Q ss_pred             ---eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCC
Q 010432          321 ---HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDP  397 (511)
Q Consensus       321 ---~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (511)
                         ......+|||.|||||++.+..|+..+|+||||||+||||.|.+||....+......+...+..+..          
T Consensus       340 nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f----------  409 (550)
T KOG0605|consen  340 NRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF----------  409 (550)
T ss_pred             hhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC----------
Confidence               0011368999999999999999999999999999999999999999987765443322221211111          


Q ss_pred             ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCCCCcC
Q 010432          398 RLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDM  445 (511)
Q Consensus       398 ~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~~~~  445 (511)
                          .-....+.++++||.+||. ||++|.. ..=++.++..+.++.+
T Consensus       410 ----P~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  410 ----PEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGV  451 (550)
T ss_pred             ----CCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccC
Confidence                1111234789999999999 9999986 2223333444444443

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.5e-48  Score=355.71  Aligned_cols=266  Identities=26%  Similarity=0.370  Sum_probs=215.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .+|..+++||+|.||+||+|++..         ||+.||||.++.....+  ....+||++.|+.++|+||+.|+++|..
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~---------t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~   72 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTE---------TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH   72 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecC---------CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC
Confidence            467888899999999999999876         78899999998764432  3467899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+.+-||+||++. ||+..|+.+...+....+..++.++++||+|||++.   |+||||||.|+|++             
T Consensus        73 ~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis-------------  135 (318)
T KOG0659|consen   73 KSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLIS-------------  135 (318)
T ss_pred             CCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEc-------------
Confidence            9999999999954 999999888889999999999999999999999999   99999999999999             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+|+.........  +..+-|.+|+|||++.| ..|+..+||||.|||+.||+-|.+-
T Consensus       136 ------------~~g~lKiADFGLAr~f~~p~~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~  201 (318)
T KOG0659|consen  136 ------------SDGQLKIADFGLARFFGSPNRIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPF  201 (318)
T ss_pred             ------------CCCcEEeecccchhccCCCCccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCC
Confidence                        48899999999999987765543  22367999999999986 4799999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhh-----hhccccc------cccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARP-----HLGERRR------FYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      |.+.++.+....+-.+..     .+++...      +...-.+.+.. .-..++.++.+|+.+||.+||.+|+++.|+++
T Consensus       202 fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  202 FPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             CCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            988766544333322211     1111111      11111111111 22334677799999999999999999999987


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       281 ~  281 (318)
T KOG0659|consen  281 H  281 (318)
T ss_pred             c
Confidence            4

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-48  Score=377.70  Aligned_cols=259  Identities=30%  Similarity=0.443  Sum_probs=205.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .++...+.||+|+||.||++.+.+         +|..+|||.+........+.+.+|+.+|.+|+|||||+++|......
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~---------~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~   87 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKK---------TGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE   87 (313)
T ss_pred             chhhhhccccCccceEEEEEEecC---------CCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc
Confidence            356677899999999999999876         57899999998764333456889999999999999999999754444


Q ss_pred             --eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          209 --QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       209 --~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                        .++|.|||+++|+|.+++.+.+..+++..++.+++||+.||.|||+++   ||||||||+||||+.            
T Consensus        88 ~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~------------  152 (313)
T KOG0198|consen   88 NDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDP------------  152 (313)
T ss_pred             CeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeC------------
Confidence              688999999999999999876558999999999999999999999999   999999999999983            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCC-CCcceeeeeccccccccCCcccccCC-CCccccchhHHHHHHHHHhCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~-~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DIwSlGvil~elltg~~  364 (511)
                                  .++.+||+|||+++.... ...........||+.|||||++..+. ...++|||||||++.||+||+.
T Consensus       153 ------------~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~  220 (313)
T KOG0198|consen  153 ------------SNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKP  220 (313)
T ss_pred             ------------CCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCC
Confidence                        157899999999987653 11111223468999999999998632 3359999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ||...  ...   ..+..          .+......+.++...+.++.+++.+|+..||.+||||.++|++.-.
T Consensus       221 PW~~~--~~~---~~~~~----------~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  221 PWSEF--FEE---AEALL----------LIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             cchhh--cch---HHHHH----------HHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            99753  111   11111          1111111223444457889999999999999999999999987643

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-48  Score=357.59  Aligned_cols=239  Identities=28%  Similarity=0.363  Sum_probs=206.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ..++|+.++.||.|+||+|.+++.+.         +|..||+|++++...-.   .+...+|..+|+.+.||+++++++.
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~---------~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t  112 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKH---------SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGT  112 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEcc---------CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEe
Confidence            34689999999999999999999887         67899999998765433   3456789999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      |.+.+.+||||||++||.|..+|++ .+++++..++.++.||+.||+|||+++   ||+|||||+|||||          
T Consensus       113 ~~d~~~lymvmeyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD----------  178 (355)
T KOG0616|consen  113 FKDNSNLYMVMEYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLD----------  178 (355)
T ss_pred             eccCCeEEEEEeccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeec----------
Confidence            9999999999999999999999954 458999999999999999999999999   99999999999999          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                     .++.+||+|||+|+.....     ..+.||||.|+|||++...+|+.++|+|||||++|||+.|.
T Consensus       179 ---------------~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~  238 (355)
T KOG0616|consen  179 ---------------QNGHIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGY  238 (355)
T ss_pred             ---------------cCCcEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCC
Confidence                           5899999999999987553     34579999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      +||...++....+.                ++..  .-.++..++.++++|+.++|+.|-.+|
T Consensus       239 pPF~~~~~~~iY~K----------------I~~~--~v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  239 PPFYDDNPIQIYEK----------------ILEG--KVKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             CCCcCCChHHHHHH----------------HHhC--cccCCcccCHHHHHHHHHHHhhhhHhh
Confidence            99987765322211                1111  112344456789999999999999999

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-47  Score=383.81  Aligned_cols=252  Identities=27%  Similarity=0.345  Sum_probs=208.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC----c-ccHHHHHHHHHHHhCCC-CCCcceE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG----L-QGHKEWLAEVNFLGDLV-HLNLVKL  200 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~----~-~~~~~~~~E~~il~~l~-H~nIv~l  200 (511)
                      ..++|.+.+.||+|+||+|++|++..         ++..||||++....    . ...+.+.+|+.+++.++ ||||+++
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~---------t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l   85 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRL---------TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRL   85 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeecc---------CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEE
Confidence            45689999999999999999999876         67899999877641    1 22345668999999998 9999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.++.....+++|||||.||+|.+++.. ..++.+..+..++.||+.||+|||+++   |+||||||+|||++.      
T Consensus        86 ~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~------  155 (370)
T KOG0583|consen   86 LEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDG------  155 (370)
T ss_pred             EEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecC------
Confidence            9999999999999999999999999987 668999999999999999999999999   999999999999994      


Q ss_pred             CCcceeeecccccccccccc-CceeeecCCCcccCC-CCCcceeeeeccccccccCCcccccCC-CC-ccccchhHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQD-YNAKLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGH-LT-SRSDVYSFGVVL  356 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~-~~~kl~DFGla~~~~-~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~-~~~DIwSlGvil  356 (511)
                                         + +.+||+|||++.... ...   ...+.+||+.|+|||++.+.. |+ .++||||+||+|
T Consensus       156 -------------------~~~~~Kl~DFG~s~~~~~~~~---~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViL  213 (370)
T KOG0583|consen  156 -------------------NEGNLKLSDFGLSAISPGEDG---LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVIL  213 (370)
T ss_pred             -------------------CCCCEEEeccccccccCCCCC---cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHH
Confidence                               5 889999999999874 222   245689999999999999877 85 789999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG-AQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.|++|+.||........      .........            .++... +.++..|+.+||..||.+|+++.+|+.+
T Consensus       214 y~ml~G~~PF~d~~~~~l------~~ki~~~~~------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h  275 (370)
T KOG0583|consen  214 YVLLCGRLPFDDSNVPNL------YRKIRKGEF------------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH  275 (370)
T ss_pred             HHHHhCCCCCCCccHHHH------HHHHhcCCc------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence            999999999986322111      111111101            111122 6788999999999999999999999954


Q ss_pred             hc
Q 010432          436 LK  437 (511)
Q Consensus       436 L~  437 (511)
                      =+
T Consensus       276 ~w  277 (370)
T KOG0583|consen  276 PW  277 (370)
T ss_pred             hh
Confidence            43

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.1e-47  Score=380.80  Aligned_cols=248  Identities=29%  Similarity=0.392  Sum_probs=211.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|.+.+.||+|+||+||||+.+.         +.+.||||.+.+....  ..+.+.+|++|+++|+|||||.++++|..
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~---------t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt   72 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKY---------TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET   72 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccc---------ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc
Confidence            468888999999999999998776         7889999999765433  34568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ..++|+|+|||.| +|..+|... ..++++.+..|+.|++.||.|||+++   |+|||+||.|||++             
T Consensus        73 ~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~-------------  134 (808)
T KOG0597|consen   73 SAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLE-------------  134 (808)
T ss_pred             cceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeec-------------
Confidence            9999999999965 999999654 57999999999999999999999999   99999999999999             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  ..+.+|+||||+|+....  .+.+.+.+.|||.|||||++.+++|+..+|+||+|||+|||++|++||
T Consensus       135 ------------~~~~~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF  200 (808)
T KOG0597|consen  135 ------------KGGTLKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPF  200 (808)
T ss_pred             ------------CCCceeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence                        488999999999998765  345678899999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ....   ...++.   ....+         +.   ..+...+..+..|+..+|.+||.+|.+..+++.+
T Consensus       201 ~a~s---i~~Lv~---~I~~d---------~v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  201 YARS---ITQLVK---SILKD---------PV---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             hHHH---HHHHHH---HHhcC---------CC---CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            7432   111111   11111         11   1223557889999999999999999999999874

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.2e-48  Score=403.95  Aligned_cols=268  Identities=29%  Similarity=0.456  Sum_probs=225.2

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .+.+.+.+..+.||+|.||+||+|+......    ......||||.++..... .+.+|.||+++|..|+|||||+|+|+
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p----~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV  557 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLP----GQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV  557 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCC----CccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            3445566777889999999999998764321    124568999999987665 66789999999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhC---------CC----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRR---------SL----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~---------~~----~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                      |..++.+|||+|||..|||.+||..+         +.    +++..+.+.|+.|||.||+||-++.   +|||||..+|+
T Consensus       558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNC  634 (774)
T KOG1026|consen  558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNC  634 (774)
T ss_pred             EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhc
Confidence            99999999999999999999999643         12    2788899999999999999999988   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccch
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  350 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIw  350 (511)
                      ||.                         ++..|||+||||++.....+++.......-.++|||||.|+.++|+++||||
T Consensus       635 LVg-------------------------e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVW  689 (774)
T KOG1026|consen  635 LVG-------------------------ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVW  689 (774)
T ss_pred             eec-------------------------cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhh
Confidence            999                         5889999999999998888877766555668899999999999999999999


Q ss_pred             hHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          351 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       351 SlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      ||||+|||+++ |+.||.+......   ++.++.             ..+ -..+..++.+++.||..||+.+|.+||+|
T Consensus       690 s~GVvLWEIFsyG~QPy~glSn~EV---Ie~i~~-------------g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF  752 (774)
T KOG1026|consen  690 SFGVVLWEIFSYGKQPYYGLSNQEV---IECIRA-------------GQL-LSCPENCPTEVYSLMLECWNENPKRRPSF  752 (774)
T ss_pred             hhhhhhhhhhccccCcccccchHHH---HHHHHc-------------CCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCH
Confidence            99999999998 8899987654322   222211             111 33455678999999999999999999999


Q ss_pred             HHHHHHhcCCCC
Q 010432          430 SEVVEALKPLPN  441 (511)
Q Consensus       430 ~eil~~L~~l~~  441 (511)
                      .||-..|+.+..
T Consensus       753 ~eI~~~L~~~~~  764 (774)
T KOG1026|consen  753 KEIHSRLQAWAQ  764 (774)
T ss_pred             HHHHHHHHHHHh
Confidence            999999986644

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-47  Score=381.67  Aligned_cols=252  Identities=25%  Similarity=0.369  Sum_probs=214.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ...|....+||+|+.|.||.|+...         +++.||||++........+-+++|+.+|+.++|+|||++++.|...
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~---------~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~  342 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKIS---------TKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG  342 (550)
T ss_pred             hhhhcchhhhccccccceeeeeecc---------CCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc
Confidence            3568888899999999999998765         6779999999988777767789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|+||||++||+|.+.+..  ..+++.++..|+++++.||+|||.++   |||||||.+|||++              
T Consensus       343 deLWVVMEym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~--------------  403 (550)
T KOG0578|consen  343 DELWVVMEYMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLT--------------  403 (550)
T ss_pred             ceeEEEEeecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEec--------------
Confidence            999999999999999998843  35899999999999999999999999   99999999999999              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||++..+.....  ...+.+||+.|||||++....|++++||||||++++||+-|.+||.
T Consensus       404 -----------~~g~vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYl  470 (550)
T KOG0578|consen  404 -----------MDGSVKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYL  470 (550)
T ss_pred             -----------cCCcEEEeeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCcc
Confidence                       477899999999988766443  2455789999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...+.....++.  .             ........+...+..+++|+.+||+.|+.+|+++.|+|++
T Consensus       471 nE~PlrAlyLIa--~-------------ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  471 NENPLRALYLIA--T-------------NGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             CCChHHHHHHHh--h-------------cCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            544322111110  0             0111222334557899999999999999999999999984

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-48  Score=382.62  Aligned_cols=247  Identities=28%  Similarity=0.425  Sum_probs=206.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+....++-||.|+-|.||+|+++           ++.||||.++.-       -..+++-|++|+|+||+.|.|+|..
T Consensus       122 PFe~IsELeWlGSGaQGAVF~Grl~-----------netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtq  183 (904)
T KOG4721|consen  122 PFEEISELEWLGSGAQGAVFLGRLH-----------NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQ  183 (904)
T ss_pred             CHHHhhhhhhhccCcccceeeeecc-----------CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecC
Confidence            3344455678999999999999985           568999988632       1357888999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ..-+|||||||..|-|++.|.. ...+.......|..+||.||.|||.+.   |||||||.-||||..            
T Consensus       184 sPcyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~------------  247 (904)
T KOG4721|consen  184 SPCYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISY------------  247 (904)
T ss_pred             CceeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeec------------
Confidence            9999999999999999999954 457888889999999999999999999   999999999999995            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                   +..|||+|||.++...+..   ....++||..|||||++.+.+.+.|+|||||||||||||||..||
T Consensus       248 -------------~d~VKIsDFGTS~e~~~~S---TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPY  311 (904)
T KOG4721|consen  248 -------------DDVVKISDFGTSKELSDKS---TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPY  311 (904)
T ss_pred             -------------cceEEeccccchHhhhhhh---hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCc
Confidence                         6679999999999876542   244589999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .+......                ++..-...+....+..+++.++-||+.||+..|..||+|.+|+.+|+-.
T Consensus       312 kdVdssAI----------------IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  312 KDVDSSAI----------------IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             cccchhee----------------EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            75432110                1111122234445666788999999999999999999999999998643

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.3e-47  Score=356.91  Aligned_cols=268  Identities=24%  Similarity=0.289  Sum_probs=213.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|+.+..|++|+||.||+|+++.         |++.||+|+++.+...  -.-.-+||+.+|.+++|||||.+-.+..
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~---------t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVv  145 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKK---------TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVV  145 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCC---------cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEe
Confidence            3578888999999999999999876         7889999999865421  1124589999999999999999998876


Q ss_pred             e--CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          206 E--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       206 ~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      .  -+.+|||||||+. ||..++.....++...++..++.|++.||+|||.+.   |+|||||++|+|+.          
T Consensus       146 G~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~----------  211 (419)
T KOG0663|consen  146 GSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLS----------  211 (419)
T ss_pred             ccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeec----------
Confidence            5  3679999999966 999999888889999999999999999999999999   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg  362 (511)
                                     +.+.+||+|||+|+.+.....  ..+..+-|.+|+|||++.+. .|++++|+||+|||+.||+++
T Consensus       212 ---------------~~G~lKiaDFGLAR~ygsp~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~  274 (419)
T KOG0663|consen  212 ---------------HKGILKIADFGLAREYGSPLK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQ  274 (419)
T ss_pred             ---------------cCCcEEecccchhhhhcCCcc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhc
Confidence                           588899999999999877643  25566789999999999864 699999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhh--------hcccc-----ccccccCCccCCCCCHH-HHHHHHHHHHHhcccCCCCCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPH--------LGERR-----RFYRLIDPRLEGHFSIK-GAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      ++.|.+....+..+.+-.....        +.+..     .+.......++..|... .++...+|+..+|.+||.+|.|
T Consensus       275 kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t  354 (419)
T KOG0663|consen  275 KPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT  354 (419)
T ss_pred             CCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc
Confidence            9999988766554433222111        00000     00000001122223222 3577889999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.+.|++
T Consensus       355 A~~~L~h  361 (419)
T KOG0663|consen  355 AEDGLKH  361 (419)
T ss_pred             HHHhhcc
Confidence            9999875

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-47  Score=380.85  Aligned_cols=270  Identities=26%  Similarity=0.440  Sum_probs=216.9

Q ss_pred             ccChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCC
Q 010432          118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHL  195 (511)
Q Consensus       118 ~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~  195 (511)
                      ..+..++.+..+.+.+...||+|.||+||+|+|..            .||||+++......  .+.|..|+.+|++-+|.
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG------------dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~  448 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG------------DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE  448 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeeccccc------------ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh
Confidence            34456777777888899999999999999999976            79999998775543  45799999999999999


Q ss_pred             CcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       196 nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      ||+-++|||..+.. .||+.+|+|-+|+.+|+.....|.....+.|++||+.||.|||.++   |||||||..||+|.  
T Consensus       449 NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~--  522 (678)
T KOG0193|consen  449 NILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLH--  522 (678)
T ss_pred             hheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEc--
Confidence            99999999988776 9999999999999999877778999999999999999999999999   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhH
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSF  352 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSl  352 (511)
                                             ++..|||+||||+.....-..........|...|||||+++   ..+|+..+|||||
T Consensus       523 -----------------------~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaF  579 (678)
T KOG0193|consen  523 -----------------------EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAF  579 (678)
T ss_pred             -----------------------cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhh
Confidence                                   47899999999997533222111223356889999999997   4589999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ||++|||++|..||.........    |   ..+...     +.+.+ ......+++++++|+..||.+++++||.+.+|
T Consensus       580 GiV~YELltg~lPysi~~~dqIi----f---mVGrG~-----l~pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~i  646 (678)
T KOG0193|consen  580 GIVWYELLTGELPYSIQNRDQII----F---MVGRGY-----LMPDL-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQL  646 (678)
T ss_pred             hHHHHHHHhCcCCcCCCChhheE----E---Eecccc-----cCccc-hhhhccCHHHHHHHHHHHHhcCcccCccHHHH
Confidence            99999999999999833221110    0   011110     00000 11223457899999999999999999999999


Q ss_pred             HHHhcCCCC
Q 010432          433 VEALKPLPN  441 (511)
Q Consensus       433 l~~L~~l~~  441 (511)
                      +..|+.+..
T Consensus       647 l~~l~~l~~  655 (678)
T KOG0193|consen  647 LSKLEELLP  655 (678)
T ss_pred             HHHHHHhhh
Confidence            997766544

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-46  Score=362.26  Aligned_cols=263  Identities=25%  Similarity=0.357  Sum_probs=213.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH-HHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~-~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .+.|++.+.||.|..++||+|++..         ++..||||+++.+..... +.+.+|+..|+.++||||++++..|..
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p---------~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv   95 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIP---------TNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV   95 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecc---------cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe
Confidence            4689999999999999999999876         678999999988766543 678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +..+|+||.||.+|++.+++... ...+++..+..|+++++.||.|||.+|   .||||||+.||||+            
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~------------  160 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILID------------  160 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEc------------
Confidence            99999999999999999999643 345899999999999999999999999   99999999999999            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCC-cceee-eeccccccccCCcccc--cCCCCccccchhHHHHHHHHHh
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD-KTHVS-TRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~-~~~~~-~~~~Gt~~y~aPE~~~--~~~~~~~~DIwSlGvil~ellt  361 (511)
                                   .++.|||+|||.+-.+.... ..... ..++||+.|||||++.  ...|+.|+||||||++..||.+
T Consensus       161 -------------~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~  227 (516)
T KOG0582|consen  161 -------------SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH  227 (516)
T ss_pred             -------------CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc
Confidence                         58999999999987654433 22222 5679999999999965  3589999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..||....+.....+      .+.....  ...-..+..+....++..+++++..||++||.+|||+++++++
T Consensus       228 G~aPf~k~pPmkvLl~------tLqn~pp--~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  228 GHAPFSKYPPMKVLLL------TLQNDPP--TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             CCCCcccCChHHHHHH------HhcCCCC--CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            9999987655322111      1111110  0000111222223345689999999999999999999999864

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-47  Score=370.96  Aligned_cols=250  Identities=25%  Similarity=0.354  Sum_probs=211.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..|+.+++||+|+||.||+|.+..         +++.||||++..+.... .+++.+|+.+|..++++||.++|+.+..+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~---------t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g   83 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNK---------TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG   83 (467)
T ss_pred             cccccchhccccccceeeeeeecc---------ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec
Confidence            357777899999999999999876         78899999998775443 46788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++++||||.||++.+.|.. +..+.+..+..++++++.||.|||.++   .||||||+.|||+..             
T Consensus        84 ~~LwiiMey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~-------------  146 (467)
T KOG0201|consen   84 TKLWIIMEYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSE-------------  146 (467)
T ss_pred             ccHHHHHHHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEec-------------
Confidence            999999999999999999854 345578888889999999999999999   999999999999984             


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                  ++.+||+|||.+..+......  ..+++||+.|||||++.+..|+.|+||||||++.+||++|.+|+.
T Consensus       147 ------------~g~vkl~DfgVa~ql~~~~~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s  212 (467)
T KOG0201|consen  147 ------------SGDVKLADFGVAGQLTNTVKR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHS  212 (467)
T ss_pred             ------------cCcEEEEecceeeeeechhhc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCc
Confidence                        688999999999887664433  356899999999999998899999999999999999999999998


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...+....                 -++.....+.....+++.+++|+..||++||+.||+|.+++++
T Consensus       213 ~~hPmrvl-----------------flIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  213 KLHPMRVL-----------------FLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             ccCcceEE-----------------EeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            76553211                 1222222223333556889999999999999999999999874

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-46  Score=379.02  Aligned_cols=249  Identities=27%  Similarity=0.371  Sum_probs=209.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +-|++++.||.|+-|.|-+|++..         ||+.+|||++.+...   .....+.+|+-||+-|.||||++||++|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~---------TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe   82 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAE---------TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE   82 (786)
T ss_pred             cceeccccccCCCCceehhhhccc---------ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec
Confidence            458888999999999999999876         899999999977621   11245779999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +..++|||+||+++|.|+++|.++ +++++..+.+++.||+.|+.|+|..+   |+||||||+|+||+.           
T Consensus        83 ~~~~lylvlEyv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~-----------  147 (786)
T KOG0588|consen   83 NKQHLYLVLEYVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDV-----------  147 (786)
T ss_pred             cCceEEEEEEecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhc-----------
Confidence            999999999999999999999765 47999999999999999999999999   999999999999994           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~~  364 (511)
                                    +..+||+|||+|.....+.   ...+.||++.|.|||++.+.+| +.++||||+|||||-||||+.
T Consensus       148 --------------~~nIKIADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~L  210 (786)
T KOG0588|consen  148 --------------KNNIKIADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKL  210 (786)
T ss_pred             --------------ccCEeeeccceeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCC
Confidence                          5569999999998765543   2445799999999999999999 579999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||++.+   ...+...++..               .-+++...+.++.+||.+||..||.+|.|+.||++|-
T Consensus       211 PFdDdN---ir~LLlKV~~G---------------~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP  264 (786)
T KOG0588|consen  211 PFDDDN---IRVLLLKVQRG---------------VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP  264 (786)
T ss_pred             CCCCcc---HHHHHHHHHcC---------------cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence            998542   12222111110               1112233467899999999999999999999999875

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-46  Score=382.44  Aligned_cols=246  Identities=26%  Similarity=0.405  Sum_probs=207.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCC-CCCCcceE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDL-VHLNLVKL  200 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l-~H~nIv~l  200 (511)
                      ....++|.++++||+|+||+|+++..+.         +++.||||+++++..-   ..+..+.|.+|+... +||.+++|
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~---------~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L  434 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKG---------TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNL  434 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcC---------CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeec
Confidence            3456789999999999999999999876         6789999999988653   345678899998877 59999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.+|+..+++|+||||+.||||..++  +...+++..+..|+..|+.||+|||+++   |||||||.+|||||       
T Consensus       435 ~~~fQT~~~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD-------  502 (694)
T KOG0694|consen  435 FSCFQTKEHLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLD-------  502 (694)
T ss_pred             ccccccCCeEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEc-------
Confidence            99999999999999999999965544  3357999999999999999999999999   99999999999999       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .++++||+|||+++.......  ...++|||+.|||||++.+..|+.++|+|||||+|||||
T Consensus       503 ------------------~eGh~kiADFGlcKe~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML  562 (694)
T KOG0694|consen  503 ------------------TEGHVKIADFGLCKEGMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEML  562 (694)
T ss_pred             ------------------ccCcEEecccccccccCCCCC--ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHH
Confidence                              489999999999998653322  245699999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      .|..||.+.++....+.                ++..  ...++.-.+.++..||+++|.+||++|..+
T Consensus       563 ~Gq~PF~gddEee~Fds----------------I~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  563 VGESPFPGDDEEEVFDS----------------IVND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             cCCCCCCCCCHHHHHHH----------------HhcC--CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            99999987654332211                1111  122334457889999999999999999855

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.9e-46  Score=376.72  Aligned_cols=267  Identities=29%  Similarity=0.432  Sum_probs=205.9

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      +..++|++.++||+|+||.||+|.+....    ...++..||||+++.... .....+.+|+.+|.++ +|||||+++++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~   79 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGID----KKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGA   79 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccC----CcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence            34568999999999999999999864211    112567899999975432 2235688999999999 89999999998


Q ss_pred             EEeC-CeEEEEEEccCCCCHHHHHhhCC----------------------------------------------------
Q 010432          204 CIED-DQRLLVYEFMPRGSLENHLFRRS----------------------------------------------------  230 (511)
Q Consensus       204 ~~~~-~~~~lv~E~~~~g~L~~~l~~~~----------------------------------------------------  230 (511)
                      +... ..+++|||||++|+|.+++....                                                    
T Consensus        80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T cd05102          80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP  159 (338)
T ss_pred             ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence            8764 45889999999999999986421                                                    


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccC
Q 010432          231 ---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY  301 (511)
Q Consensus       231 ---------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (511)
                               ..+++..++.++.||+.||+|||+++   |+||||||+|||++                         +++
T Consensus       160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~-------------------------~~~  211 (338)
T cd05102         160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLS-------------------------ENN  211 (338)
T ss_pred             chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEc-------------------------CCC
Confidence                     24777888999999999999999988   99999999999998                         477


Q ss_pred             ceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHh
Q 010432          302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEW  380 (511)
Q Consensus       302 ~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~  380 (511)
                      .+||+|||+++...............+|+.|||||++.+..++.++|||||||+||||++ |..||.......  .+...
T Consensus       212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~~~  289 (338)
T cd05102         212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFCQR  289 (338)
T ss_pred             cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHH
Confidence            899999999987543322222233456789999999999999999999999999999997 999997643211  11110


Q ss_pred             hhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          381 ARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                          .....          ....+...+..+.+|+.+||+.||.+||++.+|++.|+.+.
T Consensus       290 ----~~~~~----------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         290 ----LKDGT----------RMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             ----HhcCC----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                00000          00111223567899999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-46  Score=362.27  Aligned_cols=262  Identities=26%  Similarity=0.345  Sum_probs=208.5

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------------cHHHHHHHHHHHh
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------------GHKEWLAEVNFLG  190 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------------~~~~~~~E~~il~  190 (511)
                      ....++|++++.||+|.||.|-+|++..         +++.||||++.+....              ..+.+.+|+.||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~---------~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailK  163 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEV---------DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILK  163 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecC---------CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHH
Confidence            3456899999999999999999999876         6789999999754321              1246889999999


Q ss_pred             CCCCCCcceEeeEEEe--CCeEEEEEEccCCCCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC
Q 010432          191 DLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT  267 (511)
Q Consensus       191 ~l~H~nIv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~-l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp  267 (511)
                      +|+|||||+|+.+..+  .+.+|||+|||..|.+...  ....+ +.+.+++.|+++++.||+|||.++   ||||||||
T Consensus       164 kl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~--p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKP  238 (576)
T KOG0585|consen  164 KLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC--PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKP  238 (576)
T ss_pred             hcCCcCeeEEEEeecCcccCceEEEEEeccCCccccC--CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccch
Confidence            9999999999999876  4689999999999887532  22334 899999999999999999999999   99999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc---ceeeeeccccccccCCcccccCC--
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK---THVSTRVMGTYGYAAPEYVMTGH--  342 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~---~~~~~~~~Gt~~y~aPE~~~~~~--  342 (511)
                      +|+||+                         .++++||+|||.+.....+..   .......+|||.|||||++.++.  
T Consensus       239 sNLLl~-------------------------~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~  293 (576)
T KOG0585|consen  239 SNLLLS-------------------------SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSF  293 (576)
T ss_pred             hheEEc-------------------------CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCc
Confidence            999999                         479999999999986632211   11123368999999999987632  


Q ss_pred             --CCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcc
Q 010432          343 --LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       343 --~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~  420 (511)
                        .+.+.||||+||+||.|+.|+.||.+......                +..++...+......+..+.+++||.+||.
T Consensus       294 ~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l----------------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~  357 (576)
T KOG0585|consen  294 SYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL----------------FDKIVNDPLEFPENPEINEDLKDLIKRLLE  357 (576)
T ss_pred             cccchhhhhhhhhhhHHHhhhccCCcccchHHHH----------------HHHHhcCcccCCCcccccHHHHHHHHHHhh
Confidence              35689999999999999999999976533211                122333333333333457889999999999


Q ss_pred             cCCCCCCCHHHHHHHhcCCCC
Q 010432          421 RDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       421 ~dP~~RPs~~eil~~L~~l~~  441 (511)
                      +||.+|.+..+|..+......
T Consensus       358 KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  358 KDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             cChhheeehhhheecceeccC
Confidence            999999999999988876544

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.9e-45  Score=352.26  Aligned_cols=296  Identities=23%  Similarity=0.256  Sum_probs=220.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH---HHHHHHHHHHhCCCCCCcceEe
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~---~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .+..+.|++++.||.|.-|+||+|+.+.         ++..+|+|++.+......   .+...|-+||+.++||.++.||
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~---------t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLY  143 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRG---------TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLY  143 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecC---------CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhh
Confidence            3455678889999999999999999876         567999999987765433   3466799999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.|..+...|||||||+||+|..+++++ +..+++..++.++.+|+.||+|||-.|   ||+|||||+||||...+..++
T Consensus       144 a~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIML  220 (459)
T KOG0610|consen  144 ASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIML  220 (459)
T ss_pred             heeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEe
Confidence            9999999999999999999999988754 567999999999999999999999999   999999999999998777777


Q ss_pred             CCcceeeeccccccccc-----ccc--Ccee---e----------------ecCCCcccCC---CCCcceeeeecccccc
Q 010432          281 GKFGFCIYYGLFFNNML-----FQD--YNAK---L----------------SDFGLAKDGP---EGDKTHVSTRVMGTYG  331 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~-----~~~--~~~k---l----------------~DFGla~~~~---~~~~~~~~~~~~Gt~~  331 (511)
                      +||+++........-..     ...  ..+.   +                .|++......   ..........++||-.
T Consensus       221 sDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThE  300 (459)
T KOG0610|consen  221 SDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHE  300 (459)
T ss_pred             eeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccc
Confidence            77777754421000000     000  0000   0                1222110000   0011112445899999


Q ss_pred             ccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHH
Q 010432          332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA  411 (511)
Q Consensus       332 y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (511)
                      |+|||++.+...+.++|+|+|||+||||+.|..||.+......                +..++-..+...-....+..+
T Consensus       301 YlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T----------------l~NIv~~~l~Fp~~~~vs~~a  364 (459)
T KOG0610|consen  301 YLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET----------------LRNIVGQPLKFPEEPEVSSAA  364 (459)
T ss_pred             cccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh----------------HHHHhcCCCcCCCCCcchhHH
Confidence            9999999999999999999999999999999999987654321                222222222222222456789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhcCCCCCCcCCCC
Q 010432          412 AQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASS  448 (511)
Q Consensus       412 ~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~~~~~~~  448 (511)
                      ++||+++|.+||.+|.....=...+++.+.++.+++.
T Consensus       365 kDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  365 KDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             HHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence            9999999999999999855444555667777766653

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-46  Score=353.70  Aligned_cols=269  Identities=27%  Similarity=0.343  Sum_probs=209.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecC--CCcccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ...|..++.||+|+||.|..|.+..         +|+.||||.+..  ......++.+||+++|+.++|+|||.+++.+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~---------t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~   91 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKR---------TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFR   91 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcC---------CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence            4567778899999999999999876         778999999973  33334467889999999999999999999886


Q ss_pred             e-----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 E-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~-----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .     -..+|+|+|+| +.||.+.|.. +..+....+..++.||+.||.|+|+.+   |+||||||.|+|++.      
T Consensus        92 p~~~~~f~DvYiV~elM-etDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~------  160 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELM-ETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNA------  160 (359)
T ss_pred             cccccccceeEEehhHH-hhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeecc------
Confidence            5     34689999999 6699988854 345999999999999999999999999   999999999999994      


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~el  359 (511)
                                         +..+||||||+|+...........+..+-|.+|+|||++. ...|+.++||||.||||.||
T Consensus       161 -------------------~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEm  221 (359)
T KOG0660|consen  161 -------------------DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEM  221 (359)
T ss_pred             -------------------CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHH
Confidence                               7778999999999875432233346678899999999886 56899999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccc----------cccccccCCccCCCCC---HHHHHHHHHHHHHhcccCCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGER----------RRFYRLIDPRLEGHFS---IKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~---~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      ++|++.|.+........++......-.+.          ..+.+.+.......+.   ....+.+.+|+.+||..||.+|
T Consensus       222 L~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kR  301 (359)
T KOG0660|consen  222 LTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKR  301 (359)
T ss_pred             HcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCcccc
Confidence            99999999876554444333222111000          0011111111111111   1345789999999999999999


Q ss_pred             CCHHHHHHH
Q 010432          427 PLMSEVVEA  435 (511)
Q Consensus       427 Ps~~eil~~  435 (511)
                      +|++|.|++
T Consensus       302 ita~eAL~h  310 (359)
T KOG0660|consen  302 ITAEEALAH  310 (359)
T ss_pred             CCHHHHhcC
Confidence            999999985

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-47  Score=343.88  Aligned_cols=259  Identities=24%  Similarity=0.327  Sum_probs=211.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      +.++|++.+.||+|.|+.||++.+..         +|+.+|+|+++....  ...+++.+|++|.+.|+|||||+|++.+
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~---------tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti   79 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKT---------TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI   79 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhcc---------chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh
Confidence            45678888899999999999997765         899999999976543  3457788999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ......|||+|++.||+|..-|..+ ..+++..+-.+++||+.+|.|+|.++   |||||+||+|+||.+..        
T Consensus        80 ~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~--------  147 (355)
T KOG0033|consen   80 QEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKA--------  147 (355)
T ss_pred             cccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeecc--------
Confidence            9999999999999999998877655 45788889999999999999999999   99999999999998643        


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    ..--+||+|||+|..+..+.   .....+|||.|||||++...+|+..+|||+.|||||-|+.|++
T Consensus       148 --------------~~A~vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~  210 (355)
T KOG0033|consen  148 --------------KGAAVKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP  210 (355)
T ss_pred             --------------CCCceeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCC
Confidence                          24568999999999887332   2445789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ||.+....   .+.+.+...           +-...+......++++++|+++||..||.+|.|+.|.|++-+
T Consensus       211 PF~~~~~~---rlye~I~~g-----------~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW  269 (355)
T KOG0033|consen  211 PFWDEDQH---RLYEQIKAG-----------AYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW  269 (355)
T ss_pred             CCCCccHH---HHHHHHhcc-----------ccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence            99864321   121111110           000111122234678999999999999999999999998643

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-45  Score=353.41  Aligned_cols=249  Identities=23%  Similarity=0.355  Sum_probs=211.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHH---HHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~---~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .+|++.+.||+|.||.|-+|....         .|+.||||.++++...+..   .+.+|++||..|+||||+.+|.+|.
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~---------sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE  123 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHK---------SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE  123 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhcc---------CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc
Confidence            468888999999999999998754         6889999999988766544   3678999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+.+.|||||..+|.|++|+..+ +.+++..+..+++||+.|+.|+|.++   ++|||||.+|||||            
T Consensus       124 NkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD------------  187 (668)
T KOG0611|consen  124 NKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLD------------  187 (668)
T ss_pred             CCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeec------------
Confidence            999999999999999999999665 47999999999999999999999998   99999999999999            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~~  364 (511)
                                   ++.++||+||||+..+....   ..+++||++-|.+||++.+.+| ++.+|-|||||+||.|+.|..
T Consensus       188 -------------~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtM  251 (668)
T KOG0611|consen  188 -------------QNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTM  251 (668)
T ss_pred             -------------CCCCeeeeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhccc
Confidence                         58889999999998876543   3566999999999999999998 678999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ||++...   ..++..+.             ...+.   ..+.+..+.-||++||..||++|.|+.+|..+++
T Consensus       252 PFDG~Dh---k~lvrQIs-------------~GaYr---EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  252 PFDGRDH---KRLVRQIS-------------RGAYR---EPETPSDASGLIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             ccCCchH---HHHHHHhh-------------ccccc---CCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence            9987532   12222111             11111   1112456778999999999999999999999875

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=5.8e-45  Score=348.07  Aligned_cols=266  Identities=25%  Similarity=0.321  Sum_probs=206.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCC-cceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLN-LVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~n-Iv~l~~~~~  205 (511)
                      ..|..+++||+|+||+||+|+.+.         +|+.||+|.+......  .....++|+.+|++|+|+| ||.|++++.
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~---------~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~   81 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKR---------TGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIH   81 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEec---------CCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeee
Confidence            346666789999999999999876         7889999999876432  2345789999999999999 999999999


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      ..+      .++||+||+ .-+|..++....   ..++...+..++.||+.||+|||+++   |+||||||.||||+   
T Consensus        82 ~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~---  154 (323)
T KOG0594|consen   82 TSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLIS---  154 (323)
T ss_pred             ecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEEC---
Confidence            877      789999999 459999997654   46788899999999999999999999   99999999999999   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVV  355 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvi  355 (511)
                                            +.+.+||+|||+|+........  .+..++|.+|+|||++.+. .|+..+||||+|||
T Consensus       155 ----------------------~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcI  210 (323)
T KOG0594|consen  155 ----------------------SSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCI  210 (323)
T ss_pred             ----------------------CCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHH
Confidence                                  4888999999999976544332  4556889999999999976 79999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccccccc---ccCC--ccCC-----CCCHH---HHHHHHHHHHHhcccC
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYR---LIDP--RLEG-----HFSIK---GAQKAAQLAAHCLSRD  422 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~-----~~~~~---~~~~~~~Li~~cl~~d  422 (511)
                      ++||++++..|.+..+......+-..... +....+..   +.+-  .+..     .+...   ......+|+.+||+++
T Consensus       211 faEm~~~~~LFpG~se~~ql~~If~~lGt-P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~  289 (323)
T KOG0594|consen  211 FAEMFTRRPLFPGDSEIDQLFRIFRLLGT-PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYD  289 (323)
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHHHcCC-CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccC
Confidence            99999999999887653221111111110 00000100   0000  0000     00111   1247889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|.|+..++.+
T Consensus       290 p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  290 PAKRISAKGALTH  302 (323)
T ss_pred             cccCcCHHHHhcC
Confidence            9999999999986

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.4e-44  Score=356.59  Aligned_cols=252  Identities=29%  Similarity=0.408  Sum_probs=202.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .|++.+.||+|+||.||+|.+..         +++.||||.+......   ....+.+|+.+|++++|+||+++++++..
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~   71 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRA---------TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET   71 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEec---------CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc
Confidence            37778899999999999999876         6789999998754322   22457889999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++..++|||||++|+|.+++... ...+++..++.++.||+.||+|||+.+   |+||||||+|||++            
T Consensus        72 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~------------  136 (285)
T cd05631          72 KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLD------------  136 (285)
T ss_pred             CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEEC------------
Confidence            99999999999999999887543 346899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||++........   .....||..|||||++.+..++.++|||||||++|||++|+.|
T Consensus       137 -------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p  200 (285)
T cd05631         137 -------------DRGHIRISDLGLAVQIPEGET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP  200 (285)
T ss_pred             -------------CCCCEEEeeCCCcEEcCCCCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCC
Confidence                         467899999999987543221   2335799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      |.............   .....           ....++...+..+.+|+.+||+.||.+||+     +++++++
T Consensus       201 f~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         201 FRKRKERVKREEVD---RRVKE-----------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             CCCCCcchhHHHHH---HHhhc-----------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            98654322111110   00000           011122234578899999999999999997     7788764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4.9e-44  Score=355.95  Aligned_cols=272  Identities=28%  Similarity=0.445  Sum_probs=207.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCC-------CccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcce
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTA-------PVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~-------~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      .++|++.++||+|+||.||+|.+......       .+..+++..||||++...... ....|.+|+.+|.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            45788999999999999999987543211       122345668999999765332 2356889999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCC------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVI  261 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~ii  261 (511)
                      +++++...+..+|||||+++|+|.+++....                  ..+++..++.++.||+.||.|||+++   |+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            9999999999999999999999999985421                  23677888999999999999999998   99


Q ss_pred             ecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC
Q 010432          262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG  341 (511)
Q Consensus       262 HrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~  341 (511)
                      ||||||+|||++                         +++.+||+|||+++...............++..|||||++.+.
T Consensus       161 H~dlkp~Nill~-------------------------~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  215 (304)
T cd05096         161 HRDLATRNCLVG-------------------------ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG  215 (304)
T ss_pred             ccCcchhheEEc-------------------------CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC
Confidence            999999999998                         4778999999999876544333333345568899999999888


Q ss_pred             CCCccccchhHHHHHHHHHh--CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhc
Q 010432          342 HLTSRSDVYSFGVVLLEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       342 ~~~~~~DIwSlGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl  419 (511)
                      .++.++|||||||++|||++  +..||......   ...............       ......+..++..+.+|+.+||
T Consensus       216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~cl  285 (304)
T cd05096         216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDE---QVIENAGEFFRDQGR-------QVYLFRPPPCPQGLYELMLQCW  285 (304)
T ss_pred             CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH---HHHHHHHHHhhhccc-------cccccCCCCCCHHHHHHHHHHc
Confidence            99999999999999999987  55677654321   111111111110000       0000111223567899999999


Q ss_pred             ccCCCCCCCHHHHHHHhc
Q 010432          420 SRDPKARPLMSEVVEALK  437 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~L~  437 (511)
                      +.||.+|||+.+|.+.|+
T Consensus       286 ~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         286 SRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             cCCchhCcCHHHHHHHHh
Confidence            999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-45  Score=330.22  Aligned_cols=251  Identities=26%  Similarity=0.387  Sum_probs=210.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|-||.||+|+.+.         ++..||+|++.+...   ....++.+|++|-..|+||||+++|++|
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekk---------s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f   91 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKK---------SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF   91 (281)
T ss_pred             hhhccccccccCCccccEeEeeecc---------CCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence            4679999999999999999999876         677999999976542   2345788999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      .+....||++||...|+|...|.. ....+++.....++.|+|.||.|+|..+   ||||||||+|+|++.         
T Consensus        92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~---------  159 (281)
T KOG0580|consen   92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGS---------  159 (281)
T ss_pred             eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCC---------
Confidence            999999999999999999999973 3456899999999999999999999988   999999999999994         


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                      .+.+||+|||.+.......    ..+.|||..|.+||++.+..++..+|+|++|++.||++.|.
T Consensus       160 ----------------~~~lkiAdfGwsV~~p~~k----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~  219 (281)
T KOG0580|consen  160 ----------------AGELKIADFGWSVHAPSNK----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGL  219 (281)
T ss_pred             ----------------CCCeeccCCCceeecCCCC----ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcC
Confidence                            7789999999998765332    34579999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      +||.........   ..+.           -+    .-.++...+..+.+||.+||..+|.+|....|++++-.
T Consensus       220 ppFes~~~~etY---krI~-----------k~----~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw  275 (281)
T KOG0580|consen  220 PPFESQSHSETY---KRIR-----------KV----DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW  275 (281)
T ss_pred             CchhhhhhHHHH---HHHH-----------Hc----cccCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence            999765421111   1000           01    11122334678899999999999999999999998753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=8.6e-45  Score=371.88  Aligned_cols=264  Identities=26%  Similarity=0.394  Sum_probs=205.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.++||+|+||.||+|++...    ....++..||||+++.... ...+.+.+|+.+|..+ +|||||+++++|
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~----~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGL----FKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEecc----ccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            345788999999999999999976321    1123567899999975432 2335688999999999 899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC------------------------------------------------------
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS------------------------------------------------------  230 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~------------------------------------------------------  230 (511)
                      ...+..++|||||++|+|.+++....                                                      
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS  188 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence            99999999999999999999986421                                                      


Q ss_pred             --------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          231 --------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       231 --------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                                          ..+++..++.++.||+.||.|||+++   |+||||||+|||++                 
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~-----------------  248 (375)
T cd05104         189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLT-----------------  248 (375)
T ss_pred             cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEE-----------------
Confidence                                24678889999999999999999988   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKN  369 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~  369 (511)
                              ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus       249 --------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~  320 (375)
T cd05104         249 --------HGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGM  320 (375)
T ss_pred             --------CCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence                    467799999999987654332222223345678999999999999999999999999999998 88888654


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ....  .........              .....+...+.++.+|+.+||+.||++||++.+|++.|+.
T Consensus       321 ~~~~--~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         321 PVDS--KFYKMIKEG--------------YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CchH--HHHHHHHhC--------------ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            3211  111111110              0000111124678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2e-45  Score=365.77  Aligned_cols=251  Identities=26%  Similarity=0.371  Sum_probs=212.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|..+++||+|+||.+++++++.         .+..|++|.+.......  ++...+|+.+++++.|||||.+++.|..
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~---------~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~   74 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKS---------DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEE   74 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhcc---------CCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhc
Confidence            578899999999999999999876         45689999998766443  3457899999999999999999999999


Q ss_pred             CCe-EEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 DDQ-RLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 ~~~-~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ++. ++|||+||+||+|.+.|.... ..++++.+..|+.||+.||.|||+++   |+|||||+.||++..          
T Consensus        75 ~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk----------  141 (426)
T KOG0589|consen   75 DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTK----------  141 (426)
T ss_pred             CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccc----------
Confidence            887 999999999999999997554 67999999999999999999999888   999999999999994          


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                     +..|||+|||+|+.+.....  ...+.+||+.||+||++.+.+|+.|+|||||||++|||++-++
T Consensus       142 ---------------~~~VkLgDfGlaK~l~~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~  204 (426)
T KOG0589|consen  142 ---------------DKKVKLGDFGLAKILNPEDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKP  204 (426)
T ss_pred             ---------------cCceeecchhhhhhcCCchh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccc
Confidence                           67789999999999876542  2445789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|...+..   .++..+..              ......+...+.+++.|+..||..+|..||++.++|..
T Consensus       205 aF~a~~m~---~Li~ki~~--------------~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  205 AFKASNMS---ELILKINR--------------GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ccCccchH---HHHHHHhh--------------ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            99865432   12111111              11222344457889999999999999999999999975

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-44  Score=378.63  Aligned_cols=262  Identities=24%  Similarity=0.309  Sum_probs=211.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeE-
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGY-  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~-  203 (511)
                      +...++++.++|.+|||+.||+|.+..         .|..||+|++-..+....+.+.+|+++|++|. |+|||.|++. 
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~---------~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss  104 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVK---------GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSS  104 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecC---------CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccc
Confidence            344577888999999999999999875         34799999998776666778899999999996 9999999993 


Q ss_pred             EEe------CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          204 CIE------DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       204 ~~~------~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      ...      .-+++|.||||.||.|-+++..+ ...|.+.++++|+.|+++|+.+||... +||||||||-+||||.   
T Consensus       105 ~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls---  180 (738)
T KOG1989|consen  105 AINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLS---  180 (738)
T ss_pred             cccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEc---
Confidence            221      13567999999999999999754 345999999999999999999999987 8899999999999999   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-ee------eeeccccccccCCcccc---cCCCCcc
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HV------STRVMGTYGYAAPEYVM---TGHLTSR  346 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~------~~~~~Gt~~y~aPE~~~---~~~~~~~  346 (511)
                                            .++..||||||.|......... ..      .-...-|+.|+|||++.   +.+++.|
T Consensus       181 ----------------------~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eK  238 (738)
T KOG1989|consen  181 ----------------------ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEK  238 (738)
T ss_pred             ----------------------CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcch
Confidence                                  4778999999999753322110 00      00124699999999885   6789999


Q ss_pred             ccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       347 ~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      +|||||||+||-|+....||.....                    ..+++..+...-....+..+.+||..||+.||++|
T Consensus       239 sDIWALGclLYkLCy~t~PFe~sg~--------------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~R  298 (738)
T KOG1989|consen  239 SDIWALGCLLYKLCYFTTPFEESGK--------------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDER  298 (738)
T ss_pred             hHHHHHHHHHHHHHHhCCCcCcCcc--------------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccC
Confidence            9999999999999999999975422                    12333333333334668899999999999999999


Q ss_pred             CCHHHHHHHhcCCCCC
Q 010432          427 PLMSEVVEALKPLPNL  442 (511)
Q Consensus       427 Ps~~eil~~L~~l~~~  442 (511)
                      |++-+|+..+.++.+.
T Consensus       299 PnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  299 PNIYQVLEEIFELANK  314 (738)
T ss_pred             CCHHHHHHHHHHHhcC
Confidence            9999999988776554

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-45  Score=350.49  Aligned_cols=260  Identities=26%  Similarity=0.367  Sum_probs=201.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC--
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED--  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~--  207 (511)
                      .|...+++|.|+||.||+|....         +++.||||.+..+..-    -.+|+.||++++|||||+|+.+|...  
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e---------~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~   91 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRE---------TEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTE   91 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcC---------CCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCC
Confidence            46667899999999999999986         5779999998765422    23799999999999999999888753  


Q ss_pred             -C--eEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          208 -D--QRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       208 -~--~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                       +  ...|||||++. +|.+.++.   .+..++...+.-+..||.+||.|||+.+   |+||||||.|||+|.       
T Consensus        92 ~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~-------  160 (364)
T KOG0658|consen   92 SDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDP-------  160 (364)
T ss_pred             CchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcC-------
Confidence             2  23499999976 99998863   3567888889999999999999999988   999999999999996       


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~ell  360 (511)
                                       +.+.+||||||.|+.+..+...   .....|..|+|||.+.+. .|+.+.||||.|||+.||+
T Consensus       161 -----------------~tg~LKicDFGSAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl  220 (364)
T KOG0658|consen  161 -----------------DTGVLKICDFGSAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELL  220 (364)
T ss_pred             -----------------CCCeEEeccCCcceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHh
Confidence                             5789999999999987665543   234568999999999864 7999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhh-cccc------------ccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHL-GERR------------RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      -|++.|.+......  +...+...- +...            .+.++....+...+....++++.+|+.++|+++|.+|.
T Consensus       221 ~g~plFpG~s~~dQ--L~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~  298 (364)
T KOG0658|consen  221 KGQPLFPGDSSVDQ--LVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRL  298 (364)
T ss_pred             cCCcccCCCCHHHH--HHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcC
Confidence            99999998654333  222222110 0000            11111111111112334468899999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+++.+
T Consensus       299 ~~~~~l~h  306 (364)
T KOG0658|consen  299 SALEALAH  306 (364)
T ss_pred             CHHHHhcc
Confidence            99999863

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.3e-44  Score=355.65  Aligned_cols=267  Identities=23%  Similarity=0.330  Sum_probs=203.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.++||.|+||.||+|++..         ++..||+|+++.... .....+.+|+.++++++||||+++++++..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   75 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKL---------TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE   75 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECC---------CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            579999999999999999998865         677999999975432 2234678999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+. |+|.+++......+++..+..++.||+.||+|||+++   |+||||||+|||++              
T Consensus        76 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~--------------  137 (288)
T cd07871          76 RCLTLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLIN--------------  137 (288)
T ss_pred             CeEEEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEC--------------
Confidence            99999999996 5999998766666889999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+++........  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus       138 -----------~~~~~kl~DfG~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf  204 (288)
T cd07871         138 -----------EKGELKLADFGLARAKSVPTKT--YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMF  204 (288)
T ss_pred             -----------CCCCEEECcCcceeeccCCCcc--ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence                       4778999999999865432221  223568999999998875 56899999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhh--------hhhccccccccccCCccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          367 DKNRPNGEHNLVEWAR--------PHLGERRRFYRLIDPRLEGH----FSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ...........+....        ........+.....+.....    .....+.++.+||.+||+.||.+|||+.|+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         205 PGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             CCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            7654322211111000        00000011111111110000    00122467889999999999999999999987


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       285 h  285 (288)
T cd07871         285 H  285 (288)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=8.8e-45  Score=371.58  Aligned_cols=266  Identities=26%  Similarity=0.396  Sum_probs=207.5

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      ...++|++.+.||+|+||.||+|++...+.    ..++..||||+++..... ....+.+|+.+|+.+ +|+|||+++++
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~  110 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGK----EDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGA  110 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCc----ccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence            344579999999999999999998754221    124568999999765332 235688999999999 89999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCC-----------------------------------------------------
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRS-----------------------------------------------------  230 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------------------------------------------  230 (511)
                      |...+..++|||||++|+|.+++....                                                     
T Consensus       111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (374)
T cd05106         111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS  190 (374)
T ss_pred             ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence            999999999999999999999985321                                                     


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccccc
Q 010432          231 ----------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN  294 (511)
Q Consensus       231 ----------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~  294 (511)
                                      ..+++..++.|+.||+.||.|||+++   |+||||||+|||++                     
T Consensus       191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~---------------------  246 (374)
T cd05106         191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLT---------------------  246 (374)
T ss_pred             ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEe---------------------
Confidence                            24678889999999999999999988   99999999999998                     


Q ss_pred             ccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCC
Q 010432          295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNG  373 (511)
Q Consensus       295 ~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~  373 (511)
                          ++..+||+|||+++...............++..|||||++.+..++.++|||||||++|||++ |+.||.......
T Consensus       247 ----~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~  322 (374)
T cd05106         247 ----DGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS  322 (374)
T ss_pred             ----CCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence                467899999999987654332222223345678999999998999999999999999999997 999997543211


Q ss_pred             chhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                        .......    .          ......+...+.++.+|+.+||+.||.+||++.+|++.|+.+
T Consensus       323 --~~~~~~~----~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         323 --KFYKMVK----R----------GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             --HHHHHHH----c----------ccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              1111100    0          001111111246789999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2e-44  Score=361.97  Aligned_cols=243  Identities=31%  Similarity=0.388  Sum_probs=197.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      ++||+|+||.||+|++..         +|+.||||+++....   .....+.+|+.+|++++||||+++++++...+..|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~   71 (323)
T cd05571           1 KLLGKGTFGKVILVREKA---------TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLC   71 (323)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEE
Confidence            369999999999999865         678999999975432   22345788999999999999999999999999999


Q ss_pred             EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccc
Q 010432          212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL  291 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~  291 (511)
                      |||||+++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++                  
T Consensus        72 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~------------------  129 (323)
T cd05571          72 FVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLD------------------  129 (323)
T ss_pred             EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEEC------------------
Confidence            999999999999998654 47899999999999999999999998   99999999999998                  


Q ss_pred             cccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 010432          292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP  371 (511)
Q Consensus       292 ~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~  371 (511)
                             .++.+||+|||+++........  ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       130 -------~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~  200 (323)
T cd05571         130 -------KDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  200 (323)
T ss_pred             -------CCCCEEEeeCCCCcccccCCCc--ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH
Confidence                   4778999999999864322211  2335799999999999999999999999999999999999999975422


Q ss_pred             CCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      .   .+....   ...        +    ..++...+..+.+||.+||+.||++||     ++.+++++
T Consensus       201 ~---~~~~~~---~~~--------~----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         201 E---KLFELI---LME--------E----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             H---HHHHHH---HcC--------C----CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            1   111110   000        0    011223357789999999999999999     78888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.6e-44  Score=363.58  Aligned_cols=246  Identities=26%  Similarity=0.370  Sum_probs=201.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .+|++.+.||+|+||.||+|++..         +++.||||++.....   .....+.+|+.+|++++||||+++++++.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   88 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKG---------TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ   88 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECC---------CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            578899999999999999999875         678999999975422   22356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..++|||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        89 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~------------  152 (329)
T PTZ00263         89 DENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLD------------  152 (329)
T ss_pred             cCCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEC------------
Confidence            999999999999999999999654 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       153 -------------~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  214 (329)
T PTZ00263        153 -------------NKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPP  214 (329)
T ss_pred             -------------CCCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCC
Confidence                         47789999999998764422     235799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      |.......   .....   ....            ..++...+..+.+||.+||+.||.+||+     +.+++.+
T Consensus       215 f~~~~~~~---~~~~i---~~~~------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        215 FFDDTPFR---IYEKI---LAGR------------LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             CCCCCHHH---HHHHH---hcCC------------cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            97543211   11110   0000            0111123467889999999999999996     5666654

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-45  Score=371.15  Aligned_cols=272  Identities=28%  Similarity=0.439  Sum_probs=215.5

Q ss_pred             HHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcc
Q 010432          122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       122 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv  198 (511)
                      ..+++..++..+.++||+|+||.||+|+++..+..     ....||||..+...   .....+|++|+++|++++|||||
T Consensus       150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~-----~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV  224 (474)
T KOG0194|consen  150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGF-----KVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV  224 (474)
T ss_pred             cccEEeccCccccceeecccccEEEEEEEEecCCc-----eeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence            44455556777779999999999999999753221     01228999998633   23346799999999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ++||++.....++||||+|.||+|.++|......++..+.+.++.++|.||+|||+++   +|||||..+|||++.    
T Consensus       225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~----  297 (474)
T KOG0194|consen  225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSK----  297 (474)
T ss_pred             EEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecC----
Confidence            9999999999999999999999999999887767999999999999999999999999   999999999999983    


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                           +..+||+|||+++....-  ........-+..|+|||.+....|+.++|||||||++||
T Consensus       298 ---------------------~~~vKISDFGLs~~~~~~--~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E  354 (474)
T KOG0194|consen  298 ---------------------KGVVKISDFGLSRAGSQY--VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE  354 (474)
T ss_pred             ---------------------CCeEEeCccccccCCcce--eeccccccCcceecChhhhccCccccccchhheeeeEEe
Confidence                                 566899999999875411  111111134689999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          359 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       359 llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      +++ |..||.+.....   +..++             +...++...+...+..+..++.+||..||++||+|.++.+.|+
T Consensus       355 if~~g~~Py~g~~~~~---v~~kI-------------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~  418 (474)
T KOG0194|consen  355 IFENGAEPYPGMKNYE---VKAKI-------------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE  418 (474)
T ss_pred             eeccCCCCCCCCCHHH---HHHHH-------------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence            999 788997654321   11111             0111122223344678899999999999999999999999998


Q ss_pred             CCCCCCc
Q 010432          438 PLPNLKD  444 (511)
Q Consensus       438 ~l~~~~~  444 (511)
                      .+.....
T Consensus       419 ~~~~~~~  425 (474)
T KOG0194|consen  419 ALEKKKE  425 (474)
T ss_pred             HHHhccc
Confidence            7765433

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-44  Score=357.57  Aligned_cols=247  Identities=24%  Similarity=0.307  Sum_probs=202.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|.+..         +++.||||++.....   .....+.+|+.+|++++||||+++++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   71 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRI---------SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH   71 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcC---------CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc
Confidence            368899999999999999999875         677999999975432   22345788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~------------  135 (291)
T cd05612          72 DQRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLD------------  135 (291)
T ss_pred             cCCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEEC------------
Confidence            999999999999999999999654 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       136 -------------~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~p  197 (291)
T cd05612         136 -------------KEGHIKLTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP  197 (291)
T ss_pred             -------------CCCCEEEEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                         47789999999998764321     235799999999999988999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHh
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  436 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~L  436 (511)
                      |.......   .....   ....            ..++...+..+.+||.+||+.||.+||+     +.+++++-
T Consensus       198 f~~~~~~~---~~~~i---~~~~------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~  255 (291)
T cd05612         198 FFDDNPFG---IYEKI---LAGK------------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR  255 (291)
T ss_pred             CCCCCHHH---HHHHH---HhCC------------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence            97643211   11110   0000            0112223567899999999999999995     88887653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4e-44  Score=353.04  Aligned_cols=245  Identities=20%  Similarity=0.318  Sum_probs=198.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEEEe----C
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIE----D  207 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~~~----~  207 (511)
                      ..||+|++|.||+|.+           +|+.||||+++......   .+.+.+|+.+|.+++|||||++++++.+    .
T Consensus        26 ~~i~~g~~~~v~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~   94 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-----------NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL   94 (283)
T ss_pred             eEEeeCCceEEEEEEE-----------CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCC
Confidence            5799999999999987           46799999998654333   3567799999999999999999999877    3


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ...++|||||++|+|.+++... ..+++...+.++.|++.||.|||.. +   ++||||||+|||++             
T Consensus        95 ~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~-------------  157 (283)
T PHA02988         95 PRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVT-------------  157 (283)
T ss_pred             CceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEEC-------------
Confidence            5688999999999999999654 4688999999999999999999984 6   88999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc--CCCCccccchhHHHHHHHHHhCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                  +++.+||+|||+++......     ....||..|+|||++.+  ..++.++|||||||++|||++|+.
T Consensus       158 ------------~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~  220 (283)
T PHA02988        158 ------------ENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKI  220 (283)
T ss_pred             ------------CCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCC
Confidence                        47789999999998654322     22468999999999875  689999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ||.......   +....   ...          .....++..++..+.+|+.+||+.||.+|||+.+|++.|+.+.
T Consensus       221 Pf~~~~~~~---~~~~i---~~~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        221 PFENLTTKE---IYDLI---INK----------NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             CCCCCCHHH---HHHHH---Hhc----------CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            997543211   11111   000          0011122234678999999999999999999999999997654

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=4.4e-44  Score=353.08  Aligned_cols=268  Identities=23%  Similarity=0.298  Sum_probs=203.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|+++.         +++.||||++.....  ...+.+.+|+.+++.++|+||+++++++..
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   71 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKE---------TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR   71 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECC---------CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec
Confidence            368999999999999999999875         677999999975432  223567899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||++++.|..+. .....+++..++.++.||+.||.|||+.+   |+||||||+|||++             
T Consensus        72 ~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~-------------  134 (287)
T cd07848          72 RGKLYLVFEYVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLIS-------------  134 (287)
T ss_pred             CCEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEc-------------
Confidence            99999999999887665443 44457899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       135 ------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf  201 (287)
T cd07848         135 ------------HNDVLKLCDFGFARNLSEGSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLF  201 (287)
T ss_pred             ------------CCCcEEEeeccCcccccccccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCC
Confidence                        4778999999999876443221 123357899999999999889999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhc--------cccccccccCCccC------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLG--------ERRRFYRLIDPRLE------GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~------~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ...........+........        ....+.....+...      .......+..+.+||.+||+.||++|||+.++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~  281 (287)
T cd07848         202 PGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC  281 (287)
T ss_pred             CCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence            76433221111111000000        00000000000000      00111235679999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       282 l~h  284 (287)
T cd07848         282 LNH  284 (287)
T ss_pred             hcC
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-44  Score=359.44  Aligned_cols=259  Identities=26%  Similarity=0.312  Sum_probs=217.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCC-CCCcceEee
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLV-HLNLVKLIG  202 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~-H~nIv~l~~  202 (511)
                      ....|++.+.||+|.||.||+|+.+.         +|+.||+|++.+.....   ...+.+|+.||++|. |||||.+++
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~---------tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~  103 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKS---------TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKD  103 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecC---------CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            34578888999999999999999876         78899999998765532   357899999999998 999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +|.+.+.+++|||+|.||.|.+.|...  .+++..+..++.||+.++.|||+.+   |+||||||+|+|+.....     
T Consensus       104 ~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~-----  173 (382)
T KOG0032|consen  104 AFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDE-----  173 (382)
T ss_pred             EEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccC-----
Confidence            999999999999999999999999776  3999999999999999999999999   999999999999985321     


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .+..+|++|||++.......   .....+||+.|+|||++....|+..+||||+||++|.|++|
T Consensus       174 ----------------~~~~ik~~DFGla~~~~~~~---~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G  234 (382)
T KOG0032|consen  174 ----------------GSGRIKLIDFGLAKFIKPGE---RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSG  234 (382)
T ss_pred             ----------------CCCcEEEeeCCCceEccCCc---eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhC
Confidence                            24589999999999876622   34568999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ..||.+.........+.  ..            +..+........+..+.+++..||..||.+|+++.++|++-+
T Consensus       235 ~~PF~~~~~~~~~~~i~--~~------------~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  235 VPPFWGETEFEIFLAIL--RG------------DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             CCCCcCCChhHHHHHHH--cC------------CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence            99998765443222111  10            011222233345788999999999999999999999999743

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-44  Score=362.14  Aligned_cols=255  Identities=24%  Similarity=0.313  Sum_probs=205.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|++..         +++.||||+++....   .....+.+|+.+|..++||||+++++++.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~   71 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKD---------TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ   71 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECC---------CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE
Confidence            368899999999999999999875         677999999975422   23356789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..|||||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~------------  135 (333)
T cd05600          72 DDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLID------------  135 (333)
T ss_pred             cCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEC------------
Confidence            999999999999999999999644 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+++....     ......||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       136 -------------~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~p  197 (333)
T cd05600         136 -------------ASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPP  197 (333)
T ss_pred             -------------CCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCC
Confidence                         477899999999986543     12345799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |...........+....          ...............+.++.+||.+||..+|.+||++.+++++-
T Consensus       198 f~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~  258 (333)
T cd05600         198 FSGSTPNETWENLKYWK----------ETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP  258 (333)
T ss_pred             CCCCCHHHHHHHHHhcc----------ccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence            97643321111110000          00000000000113357889999999999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=5.5e-44  Score=348.68  Aligned_cols=260  Identities=24%  Similarity=0.387  Sum_probs=207.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++....      ..+..||+|.++..... ....+.+|+.++.+++||||+++++++..
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~------~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   77 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPS------KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR   77 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCC------CceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec
Confidence            357889999999999999999875422      24679999999865332 23568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..+|||||+++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++             
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~-------------  141 (266)
T cd05064          78 GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVN-------------  141 (266)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEc-------------
Confidence            99999999999999999999766567899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .+..+||+|||.+......... ......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       142 ------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  208 (266)
T cd05064         142 ------------SDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             ------------CCCcEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCC
Confidence                        4778999999988764322111 1112345678999999999999999999999999999875 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.......   .....    ...          .....+..++..+.+++.+||+.+|.+||++.+|++.|..+
T Consensus       209 ~~~~~~~~---~~~~~----~~~----------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         209 YWDMSGQD---VIKAV----EDG----------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             cCcCCHHH---HHHHH----HCC----------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            97543211   11111    000          00111223456789999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-44  Score=354.35  Aligned_cols=251  Identities=24%  Similarity=0.345  Sum_probs=216.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH--HHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~--~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .=|.+.+.||+|.|++|-+|++.-         ||..||||++.+......  ..+++|++.|+-++|||||+||.+...
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVF---------TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT   88 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVF---------TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT   88 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhc---------ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc
Confidence            458888899999999999998866         889999999988765433  468899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ...+|||+|+-.+|+|++||.+....+.+..+.+++.||+.|+.|+|..+   +|||||||+|+++-.            
T Consensus        89 QTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFE------------  153 (864)
T KOG4717|consen   89 QTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFE------------  153 (864)
T ss_pred             cceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEee------------
Confidence            99999999999999999999988888999999999999999999999988   999999999998864            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCC-ccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT-SRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~-~~~DIwSlGvil~elltg~~p  365 (511)
                                  +-+-|||.|||++..+..+..   .++.||+..|-|||++.+..|+ +++||||||||||.|++|++|
T Consensus       154 ------------KlGlVKLTDFGFSNkf~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~P  218 (864)
T KOG4717|consen  154 ------------KLGLVKLTDFGFSNKFQPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPP  218 (864)
T ss_pred             ------------ecCceEeeeccccccCCCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCc
Confidence                        467799999999988776554   4568999999999999999996 579999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |...+......+                ++|=  .-..+...+.++++||..||..||.+|.+.++|+..-
T Consensus       219 FqeANDSETLTm----------------ImDC--KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~  271 (864)
T KOG4717|consen  219 FQEANDSETLTM----------------IMDC--KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTS  271 (864)
T ss_pred             cccccchhhhhh----------------hhcc--cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccc
Confidence            986654322111                1111  1234556688999999999999999999999998643

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=7.1e-44  Score=359.24  Aligned_cols=264  Identities=23%  Similarity=0.328  Sum_probs=205.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++++.||+|+||.||++++..         ++..||+|++..... .....+.+|+++|++++||||+++++++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   74 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKP---------SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS   74 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECC---------CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence            4689999999999999999999875         678999999976532 223568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +   |+||||||+|||++            
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~------------  138 (331)
T cd06649          75 DGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVN------------  138 (331)
T ss_pred             CCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEc------------
Confidence            99999999999999999998654 4688999999999999999999974 4   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||++.......    .....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       139 -------------~~~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p  201 (331)
T cd06649         139 -------------SRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP  201 (331)
T ss_pred             -------------CCCcEEEccCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence                         47789999999998654322    2335799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhh-hhcccc-------------------------------cc-ccccCCccCCCCCHHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARP-HLGERR-------------------------------RF-YRLIDPRLEGHFSIKGAQKAA  412 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~-~~~~~~-------------------------------~~-~~~~~~~~~~~~~~~~~~~~~  412 (511)
                      |.......   +...... ......                               .. ..+.............+.++.
T Consensus       202 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  278 (331)
T cd06649         202 IPPPDAKE---LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQ  278 (331)
T ss_pred             CCCCCHHH---HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHH
Confidence            96543211   1110000 000000                               00 000000000001112457899


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHh
Q 010432          413 QLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       413 ~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +||.+||+.||++|||+.+|+++.
T Consensus       279 ~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         279 EFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             HHHHHHccCCcccCCCHHHHhcCh
Confidence            999999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.4e-44  Score=366.53  Aligned_cols=267  Identities=22%  Similarity=0.316  Sum_probs=209.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-C-----CCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H-----LNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H-----~nIv~l~  201 (511)
                      ..+|+++++||+|+||.|.+|++..         |++.||||++++.. ....+...|+.||..|+ |     -|||+++
T Consensus       185 ~~rY~V~e~LGkGtFGQVvk~~d~~---------T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~  254 (586)
T KOG0667|consen  185 AYRYEVLEVLGKGSFGQVVKAYDHK---------TGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRML  254 (586)
T ss_pred             EEEEEEEEEecccccceeEEEEecC---------CCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEee
Confidence            3478999999999999999999876         78899999998764 22345677999999996 4     4899999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ++|...+++|||+|++ .-+|+++|..+. ..++...++.++.||+.||.+||+.+   |||+||||+||||...     
T Consensus       255 d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~-----  325 (586)
T KOG0667|consen  255 DYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDP-----  325 (586)
T ss_pred             eccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccC-----
Confidence            9999999999999999 569999997653 56999999999999999999999999   9999999999999853     


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        ....|||+|||.|+.......     +.+-+..|+|||++.+.+|+.+.||||||||++||+
T Consensus       326 ------------------~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~  382 (586)
T KOG0667|consen  326 ------------------KRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELF  382 (586)
T ss_pred             ------------------CcCceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHh
Confidence                              245799999999998655432     356788999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhh--------hcccccccc------------------------------ccCCccC--
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPH--------LGERRRFYR------------------------------LIDPRLE--  400 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~--------~~~~~~~~~------------------------------~~~~~~~--  400 (511)
                      +|.+.|.+..+.+....+..+...        ......++.                              ..+....  
T Consensus       383 tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~  462 (586)
T KOG0667|consen  383 TGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPG  462 (586)
T ss_pred             cCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCC
Confidence            999999887665443322211100        000000000                              0000001  


Q ss_pred             -----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          401 -----GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       401 -----~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                           ..........+.+++.+||.+||.+|+|..++++|-
T Consensus       463 ~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hp  503 (586)
T KOG0667|consen  463 SRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHP  503 (586)
T ss_pred             CcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCc
Confidence                 011113356789999999999999999999999864

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-44  Score=386.73  Aligned_cols=265  Identities=29%  Similarity=0.425  Sum_probs=216.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+.++.+.||+|.||.||.|.........    ....||||.++.... +...+|++|..+|++++|||||+++|++.+
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~----~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~  766 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSV----SPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD  766 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCc----cceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence            456677789999999999999987532210    134699999987643 445689999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ....+|++|||++|||..||+..      ...+.....+.++.|||.|+.||++++   +|||||..+|+||+.      
T Consensus       767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~------  837 (1025)
T KOG1095|consen  767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDE------  837 (1025)
T ss_pred             CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecc------
Confidence            99999999999999999999865      566899999999999999999999998   999999999999994      


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                         ...|||+|||+|+.....+.+.......-...|||||.+..+.|+.|+|||||||+|||++
T Consensus       838 -------------------~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif  898 (1025)
T KOG1095|consen  838 -------------------RRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF  898 (1025)
T ss_pred             -------------------cCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence                               6789999999999776666554444334467999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          361 T-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       361 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      | |..||..........   .    +.+..          +-..+..++..+.+||..||+.+|++||++..|++.+..+
T Consensus       899 slG~~PY~~~~n~~v~~---~----~~~gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i  961 (1025)
T KOG1095|consen  899 SLGATPYPSRSNFEVLL---D----VLEGG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI  961 (1025)
T ss_pred             hCCCCCCCCcchHHHHH---H----HHhCC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence            9 778887654322111   0    00101          2223445678899999999999999999999999977765


Q ss_pred             CC
Q 010432          440 PN  441 (511)
Q Consensus       440 ~~  441 (511)
                      .+
T Consensus       962 ~~  963 (1025)
T KOG1095|consen  962 SN  963 (1025)
T ss_pred             hh
Confidence            44

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.1e-43  Score=353.32  Aligned_cols=266  Identities=21%  Similarity=0.309  Sum_probs=201.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   74 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKV---------NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT   74 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECC---------CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec
Confidence            3679999999999999999999865         5779999999754322 23457889999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||+ .++|.+++......+++..+..++.||+.||+|||+++   |+||||||+|||++             
T Consensus        75 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~-------------  137 (303)
T cd07869          75 KETLTLVFEYV-HTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLIS-------------  137 (303)
T ss_pred             CCeEEEEEECC-CcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC-------------
Confidence            99999999999 56898888766667899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.+||+|||+++.......  ......||+.|+|||++.+ ..++.++|||||||++|||++|..|
T Consensus       138 ------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  203 (303)
T cd07869         138 ------------DTGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAA  203 (303)
T ss_pred             ------------CCCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                        477899999999975433221  1233568999999998875 4588999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhcc--cc---ccc---cccCCccC----CCCC-----HHHHHHHHHHHHHhcccCCCCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGE--RR---RFY---RLIDPRLE----GHFS-----IKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~--~~---~~~---~~~~~~~~----~~~~-----~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |.......  ............  ..   ...   ......+.    ....     ...+..+.+|+.+||+.||.+|||
T Consensus       204 f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s  281 (303)
T cd07869         204 FPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS  281 (303)
T ss_pred             CCCCccHH--HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC
Confidence            97643211  111111000000  00   000   00000000    0000     011356889999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.+++++
T Consensus       282 ~~~~l~h  288 (303)
T cd07869         282 AQAALSH  288 (303)
T ss_pred             HHHHhcC
Confidence            9999874

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-44  Score=358.18  Aligned_cols=272  Identities=26%  Similarity=0.405  Sum_probs=225.4

Q ss_pred             ccChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCC
Q 010432          118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLN  196 (511)
Q Consensus       118 ~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~n  196 (511)
                      ..+..+..+..+...+.++||.|.||.||+|.+....     ++...-||||..+.+. ....+.|+.|..+|++++|||
T Consensus       378 ~P~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~-----kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHph  452 (974)
T KOG4257|consen  378 TPTVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPE-----KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPH  452 (974)
T ss_pred             CCCCCcceeehhhccHHHhhcCCcccceeeeEecccc-----cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcc
Confidence            3344445556667777889999999999999987642     3356679999999854 344577999999999999999


Q ss_pred             cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       197 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      ||+|+|+|.+. ..|||||+++.|.|..||..+...++......++.||+.||.|||+..   +|||||..+|||+.+  
T Consensus       453 IikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsS--  526 (974)
T KOG4257|consen  453 IIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSS--  526 (974)
T ss_pred             hhheeeeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecC--
Confidence            99999999754 589999999999999999988889999999999999999999999988   999999999999995  


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil  356 (511)
                                             ...|||+|||+++...+...+... +..-++.|||||.+....++.++|||-|||.+
T Consensus       527 -----------------------p~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCm  582 (974)
T KOG4257|consen  527 -----------------------PQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCM  582 (974)
T ss_pred             -----------------------cceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHH
Confidence                                   455999999999998876665543 44567899999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||++. |..||.+-...+..                 ..+...-+...+..|++.+..|+.+||++||.+||.+.+|...
T Consensus       583 WEIl~lGvkPfqgvkNsDVI-----------------~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~  645 (974)
T KOG4257|consen  583 WEILSLGVKPFQGVKNSDVI-----------------GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI  645 (974)
T ss_pred             HHHHHhcCCccccccccceE-----------------EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence            99886 89999865433211                 1111222344566778999999999999999999999999998


Q ss_pred             hcCCCC
Q 010432          436 LKPLPN  441 (511)
Q Consensus       436 L~~l~~  441 (511)
                      |..+..
T Consensus       646 lsdv~q  651 (974)
T KOG4257|consen  646 LSDVLQ  651 (974)
T ss_pred             HHHHHH
Confidence            876644

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.7e-43  Score=348.12  Aligned_cols=262  Identities=28%  Similarity=0.472  Sum_probs=209.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||.||+|.+.....    ..+...||+|.+...... ....+.+|+.++.+++||||+++++++...
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   80 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNE----RLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE   80 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCC----CcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence            478889999999999999998765321    124568999999755332 235688999999999999999999999998


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      ...+++|||+++|+|.+++....               ..+++..++.++.||+.||.|||+++   |+||||||+|||+
T Consensus        81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~  157 (283)
T cd05048          81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLV  157 (283)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEE
Confidence            99999999999999999996431               35788889999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +                         +++.+||+|||+++...............+++.|+|||++.+..++.++|||||
T Consensus       158 ~-------------------------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl  212 (283)
T cd05048         158 G-------------------------EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF  212 (283)
T ss_pred             c-------------------------CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence            8                         477899999999987544333222334567889999999988899999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          353 GVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       353 Gvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||++|||++ |..||.+....   .+...+..              ......+..++..+.+|+.+||+.||.+||++.+
T Consensus       213 G~il~el~~~g~~p~~~~~~~---~~~~~i~~--------------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~  275 (283)
T cd05048         213 GVVLWEIFSYGLQPYYGFSNQ---EVIEMIRS--------------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKD  275 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHH---HHHHHHHc--------------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            999999998 99999764332   11111110              0111122344678999999999999999999999


Q ss_pred             HHHHhcCC
Q 010432          432 VVEALKPL  439 (511)
Q Consensus       432 il~~L~~l  439 (511)
                      |+++|+.+
T Consensus       276 i~~~l~~~  283 (283)
T cd05048         276 IHTRLRSW  283 (283)
T ss_pred             HHHHHhcC
Confidence            99999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.4e-43  Score=356.46  Aligned_cols=244  Identities=29%  Similarity=0.374  Sum_probs=197.9

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      ++||+|+||.||++++..         ++..||||++.....   .....+.+|+.+|+.++||||+++++++..++..+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   71 (328)
T cd05593           1 KLLGKGTFGKVILVREKA---------SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLC   71 (328)
T ss_pred             CeeeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEE
Confidence            369999999999999865         678999999975432   22346788999999999999999999999999999


Q ss_pred             EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccc
Q 010432          212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL  291 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~  291 (511)
                      |||||+++|+|..++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++                  
T Consensus        72 lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~------------------  129 (328)
T cd05593          72 FVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLD------------------  129 (328)
T ss_pred             EEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEEC------------------
Confidence            999999999999888543 46899999999999999999999998   99999999999998                  


Q ss_pred             cccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 010432          292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP  371 (511)
Q Consensus       292 ~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~  371 (511)
                             .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       130 -------~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~  200 (328)
T cd05593         130 -------KDGHIKITDFGLCKEGITDAA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  200 (328)
T ss_pred             -------CCCcEEEecCcCCccCCCccc--ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH
Confidence                   477899999999986432211  12345799999999999989999999999999999999999999975432


Q ss_pred             CCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHh
Q 010432          372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  436 (511)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~L  436 (511)
                      .   .....   ....        ..    .++...+.++.+|+.+||+.||.+||     ++.+++++-
T Consensus       201 ~---~~~~~---~~~~--------~~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  252 (328)
T cd05593         201 E---KLFEL---ILME--------DI----KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS  252 (328)
T ss_pred             H---HHHHH---hccC--------Cc----cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence            1   11110   0000        00    11222356789999999999999997     899998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6e-43  Score=352.64  Aligned_cols=256  Identities=29%  Similarity=0.361  Sum_probs=200.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      +|++.+.||+|+||.||+++...+.      .++..||+|++.....    ...+.+.+|+.+|..+ +|+||+++++++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~   74 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGH------DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF   74 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccC------CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE
Confidence            5888999999999999999875322      2688999999975321    2234577899999999 599999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..++..++|||||++|+|.+++..+ ..+++..+..++.||+.||.|||+++   |+||||||+|||++           
T Consensus        75 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~-----------  139 (332)
T cd05614          75 QTEAKLHLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLD-----------  139 (332)
T ss_pred             ecCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEEC-----------
Confidence            9999999999999999999998654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~  363 (511)
                                    .++.+||+|||+++........ ......||+.|||||++.+. .++.++|||||||+||||++|+
T Consensus       140 --------------~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~  204 (332)
T cd05614         140 --------------SEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA  204 (332)
T ss_pred             --------------CCCCEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC
Confidence                          4778999999999865433222 12245799999999998865 4789999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      .||............  .....        ..++.    ++...+..+.+|+.+||+.||++||     ++.+++++
T Consensus       205 ~pf~~~~~~~~~~~~--~~~~~--------~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         205 SPFTLEGERNTQSEV--SRRIL--------KCDPP----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCCCCCCCCCCHHHH--HHHHh--------cCCCC----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            999754322111110  00000        01111    1222356789999999999999999     67777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.5e-43  Score=355.56  Aligned_cols=244  Identities=31%  Similarity=0.377  Sum_probs=197.3

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      +.||+|+||.||++++..         +|..||+|+++....   .....+.+|+.+++.++||||+++++++...+..|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~   71 (323)
T cd05595           1 KLLGKGTFGKVILVREKA---------TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   71 (323)
T ss_pred             CeeeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEE
Confidence            369999999999999865         678999999975422   22345778999999999999999999999999999


Q ss_pred             EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccc
Q 010432          212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL  291 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~  291 (511)
                      |||||+++|+|..++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++                  
T Consensus        72 lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~------------------  129 (323)
T cd05595          72 FVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLD------------------  129 (323)
T ss_pred             EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEc------------------
Confidence            999999999999888554 46899999999999999999999998   99999999999998                  


Q ss_pred             cccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 010432          292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP  371 (511)
Q Consensus       292 ~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~  371 (511)
                             .++.+||+|||+++........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       130 -------~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~  200 (323)
T cd05595         130 -------KDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  200 (323)
T ss_pred             -------CCCCEEecccHHhccccCCCCc--cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH
Confidence                   4778999999998864332211  2235799999999999999999999999999999999999999975432


Q ss_pred             CCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHh
Q 010432          372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  436 (511)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~L  436 (511)
                      ..   ....   .....        .    .++...++.+.+||.+||+.||.+||     ++.+++++-
T Consensus       201 ~~---~~~~---~~~~~--------~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         201 ER---LFEL---ILMEE--------I----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             HH---HHHH---HhcCC--------C----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence            11   1110   00000        0    11223357789999999999999998     888888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-43  Score=353.78  Aligned_cols=241  Identities=32%  Similarity=0.340  Sum_probs=194.8

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||+|+||.||+|++..         +++.||||+++...   ......+.+|+.+|.+++||||+++++++...+..++|
T Consensus         1 lg~G~~g~Vy~~~~~~---------~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   71 (312)
T cd05585           1 IGKGSFGKVMQVRKRD---------TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLV   71 (312)
T ss_pred             CCcCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEE
Confidence            7999999999999875         67799999997532   22234678899999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      ||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                    
T Consensus        72 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~--------------------  127 (312)
T cd05585          72 LAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLD--------------------  127 (312)
T ss_pred             EcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEEC--------------------
Confidence            9999999999999654 46899999999999999999999998   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG  373 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~  373 (511)
                           .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... 
T Consensus       128 -----~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-  199 (312)
T cd05585         128 -----YQGHIALCDFGLCKLNMKDDD--KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-  199 (312)
T ss_pred             -----CCCcEEEEECcccccCccCCC--ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-
Confidence                 477899999999986433221  123467999999999999999999999999999999999999999754221 


Q ss_pred             chhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010432          374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL---MSEVVEA  435 (511)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs---~~eil~~  435 (511)
                           .........            ...++...+..+.+||.+||+.||.+||+   +.+++.+
T Consensus       200 -----~~~~~~~~~------------~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         200 -----EMYRKILQE------------PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             -----HHHHHHHcC------------CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence                 111111111            01122233577899999999999999985   5566554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=4e-43  Score=369.91  Aligned_cols=285  Identities=20%  Similarity=0.283  Sum_probs=200.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC------CC
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH------LN  196 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H------~n  196 (511)
                      ++....++|+++++||+|+||+||+|++..         +++.||||+++... .....+..|+.++..++|      .+
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~---------~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~  192 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRK---------RKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFP  192 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcC---------CCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcc
Confidence            344556889999999999999999999865         57799999996532 122345567777776654      45


Q ss_pred             cceEeeEEEeC-CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEecc
Q 010432          197 LVKLIGYCIED-DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       197 Iv~l~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~  274 (511)
                      |+++++++... .++|||||++ +++|.+++.+. ..+++..+..|+.||+.||+|||+ .+   ||||||||+||||+.
T Consensus       193 i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~  267 (467)
T PTZ00284        193 LMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMET  267 (467)
T ss_pred             eeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEec
Confidence            88999988764 5789999998 78999988654 478999999999999999999997 47   999999999999985


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHH
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV  354 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGv  354 (511)
                      .+....  ..       .......+...+||+|||++......     .+..+||+.|||||++.+..|+.++|||||||
T Consensus       268 ~~~~~~--~~-------~~~~~~~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv  333 (467)
T PTZ00284        268 SDTVVD--PV-------TNRALPPDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC  333 (467)
T ss_pred             CCcccc--cc-------cccccCCCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcCCCCcHHHHHHHHH
Confidence            321000  00       00001112346999999998653321     23468999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc----------cccccc---cCCccC-----------CCCCHHHHHH
Q 010432          355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER----------RRFYRL---IDPRLE-----------GHFSIKGAQK  410 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~~-----------~~~~~~~~~~  410 (511)
                      +||||++|+.||...........+......+...          ..++..   +.+...           ..........
T Consensus       334 il~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (467)
T PTZ00284        334 IIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDL  413 (467)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHH
Confidence            9999999999997654322222211111100000          000000   000000           0000112456


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          411 AAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       411 ~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +.+||.+||++||.+|||+.|+++|-
T Consensus       414 ~~dli~~mL~~dP~~R~ta~e~L~Hp  439 (467)
T PTZ00284        414 LCDLIYGLLHYDRQKRLNARQMTTHP  439 (467)
T ss_pred             HHHHHHHhCCcChhhCCCHHHHhcCc
Confidence            78999999999999999999999854

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.7e-43  Score=373.21  Aligned_cols=253  Identities=23%  Similarity=0.289  Sum_probs=203.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      .|.+.+.||+|+||.||+|....+        .+..||+|.+..........+.+|+.+|+.++|||||++++++..++.
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~--------~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~  139 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSD--------PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDK  139 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCC--------CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE
Confidence            488899999999999999987542        256899998765544444567789999999999999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          210 RLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +||||||+++|+|.++|..   ....+++..+..++.||+.||.|||+++   ||||||||+||||+             
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-------------  203 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLM-------------  203 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEEC-------------
Confidence            9999999999999998853   2446889999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||+++..............+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       204 ------------~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf  271 (478)
T PTZ00267        204 ------------PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPF  271 (478)
T ss_pred             ------------CCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence                        47789999999998765433222334567999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......   .+....   ...      ..     ..++...+..+.+||.+||+.||++||++.+++.+
T Consensus       272 ~~~~~~---~~~~~~---~~~------~~-----~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        272 KGPSQR---EIMQQV---LYG------KY-----DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             CCCCHH---HHHHHH---HhC------CC-----CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            753221   111110   000      00     01112235678999999999999999999998753

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2.8e-43  Score=358.08  Aligned_cols=249  Identities=24%  Similarity=0.342  Sum_probs=194.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|+.+++||+|+||.||+|++..         +++.||||++...... ....+.+|+.+|+.++|+||+++++++...
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  144 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRP---------TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN  144 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECC---------CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC
Confidence            356677899999999999998865         5779999999654322 235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+++|||||++|+|....     ...+..+..++.||+.||.|||+++   |+||||||+|||++              
T Consensus       145 ~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~--------------  202 (353)
T PLN00034        145 GEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLIN--------------  202 (353)
T ss_pred             CeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEc--------------
Confidence            9999999999999986532     3567778899999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----CCCCccccchhHHHHHHHHHhC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DIwSlGvil~elltg  362 (511)
                                 +++.+||+|||+++.......  ......||..|+|||++..     ..++.++|||||||++|||++|
T Consensus       203 -----------~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g  269 (353)
T PLN00034        203 -----------SAKNVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLG  269 (353)
T ss_pred             -----------CCCCEEEcccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhC
Confidence                       477899999999987543221  1233579999999998742     2345689999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||..........+.....  ..            .........+.++.+||.+||+.||++||++.||+++
T Consensus       270 ~~pf~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        270 RFPFGVGRQGDWASLMCAIC--MS------------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CCCCCCCCCccHHHHHHHHh--cc------------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            99997432222111111000  00            0111122345789999999999999999999999985

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.4e-43  Score=358.01  Aligned_cols=247  Identities=26%  Similarity=0.304  Sum_probs=200.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|.+.+.||+|+||.||+|.+...        .+..||+|++....   ......+.+|+.+++.++|||||++++++.
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~  101 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNE--------DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK  101 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECC--------CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE
Confidence            5788999999999999999987541        23589999986532   122356788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..|+|||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus       102 ~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~------------  165 (340)
T PTZ00426        102 DESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLD------------  165 (340)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEEC------------
Confidence            999999999999999999999654 46899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+++.....     .....||+.|||||++.+..++.++|||||||++|||++|..|
T Consensus       166 -------------~~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P  227 (340)
T PTZ00426        166 -------------KDGFIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPP  227 (340)
T ss_pred             -------------CCCCEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCC
Confidence                         4778999999999875432     1235799999999999988999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      |.......   .....   ....            ..++...+..+.+||.+||+.||.+|+     ++.+++++
T Consensus       228 f~~~~~~~---~~~~i---~~~~------------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        228 FYANEPLL---IYQKI---LEGI------------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             CCCCCHHH---HHHHH---hcCC------------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            97543211   00000   0000            011122346788999999999999995     78888765

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.9e-43  Score=363.74  Aligned_cols=267  Identities=23%  Similarity=0.361  Sum_probs=207.9

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCC-CCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLV-HLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~-H~nIv~l~~~  203 (511)
                      ...++|++.++||+|+||.||+|.+.....    ..++..||||+++..... ..+.+.+|+.+|+++. |||||+++++
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~----~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~  109 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSR----SQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGA  109 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCC----CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence            345789999999999999999998753211    123568999999754332 2356889999999996 9999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCC-----------------------------------------------------
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRS-----------------------------------------------------  230 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------------------------------------------  230 (511)
                      |...+..|||||||++|+|.++|....                                                     
T Consensus       110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (400)
T cd05105         110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV  189 (400)
T ss_pred             EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence            999999999999999999999885421                                                     


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCC
Q 010432          231 ------------------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS  268 (511)
Q Consensus       231 ------------------------------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~  268 (511)
                                                                ..+++..++.++.||+.||.|||+++   |+||||||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~  266 (400)
T cd05105         190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAAR  266 (400)
T ss_pred             hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChH
Confidence                                                      23677888899999999999999988   999999999


Q ss_pred             cEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCcccc
Q 010432          269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD  348 (511)
Q Consensus       269 NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D  348 (511)
                      |||++                         ++..+||+|||+++...............++..|+|||++.+..++.++|
T Consensus       267 Nill~-------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  321 (400)
T cd05105         267 NVLLA-------------------------QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSD  321 (400)
T ss_pred             hEEEe-------------------------CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhh
Confidence            99998                         46779999999998754433222223345788999999999889999999


Q ss_pred             chhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          349 VYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       349 IwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      ||||||++|||++ |..||.......  ......    ...          .....+...+..+.+|+.+||+.||++||
T Consensus       322 iwSlGvil~ellt~g~~P~~~~~~~~--~~~~~~----~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RP  385 (400)
T cd05105         322 VWSYGILLWEIFSLGGTPYPGMIVDS--TFYNKI----KSG----------YRMAKPDHATQEVYDIMVKCWNSEPEKRP  385 (400)
T ss_pred             HHHHHHHHHHHHHCCCCCCcccchhH--HHHHHH----hcC----------CCCCCCccCCHHHHHHHHHHCccCHhHCc
Confidence            9999999999997 999987532211  010000    000          01111223457889999999999999999


Q ss_pred             CHHHHHHHhcCCC
Q 010432          428 LMSEVVEALKPLP  440 (511)
Q Consensus       428 s~~eil~~L~~l~  440 (511)
                      ++.+|.+.|+.+.
T Consensus       386 t~~~l~~~l~~l~  398 (400)
T cd05105         386 SFLHLSDIVESLL  398 (400)
T ss_pred             CHHHHHHHHHHHc
Confidence            9999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.2e-43  Score=353.33  Aligned_cols=262  Identities=23%  Similarity=0.377  Sum_probs=206.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|++.+.||+|+||.||+|++...+..     ....||||+++.... ....++.+|+.+++.++||||+++++++..
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~   80 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT   80 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCc-----cceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence            35799999999999999999987653221     234699999975432 234578899999999999999999999876


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      . ..++|+||+++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++             
T Consensus        81 ~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~-------------  143 (316)
T cd05108          81 S-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVK-------------  143 (316)
T ss_pred             C-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEec-------------
Confidence            5 578999999999999999876667899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       144 ------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p  211 (316)
T cd05108         144 ------------TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  211 (316)
T ss_pred             ------------CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence                        467899999999997654333222222345678999999999999999999999999999998 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |.+....   .+....    ....          ....+..++..+.+|+.+||..||.+||++.+++..|..+.
T Consensus       212 ~~~~~~~---~~~~~~----~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         212 YDGIPAS---EISSIL----EKGE----------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             CCCCCHH---HHHHHH----hCCC----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9753221   111111    0000          00111123467889999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.8e-43  Score=355.10  Aligned_cols=266  Identities=26%  Similarity=0.372  Sum_probs=203.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||.||+|.+..         ++..||+|++...... ....+.+|+++|++++|+||++++++|..
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   74 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKP---------SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS   74 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECC---------CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE
Confidence            4689999999999999999998865         6779999998765322 23568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++..+|||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +   |+||||||+|||++            
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~------------  138 (333)
T cd06650          75 DGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVN------------  138 (333)
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEc------------
Confidence            99999999999999999998654 4688999999999999999999974 5   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||++.......    .....||..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       139 -------------~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  201 (333)
T cd06650         139 -------------SRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP  201 (333)
T ss_pred             -------------CCCCEEEeeCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                         46779999999997653321    2235689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhh-hhccc------c-----------------ccccccC---CccCCCC-CHHHHHHHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARP-HLGER------R-----------------RFYRLID---PRLEGHF-SIKGAQKAAQLAAH  417 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~-~~~~~------~-----------------~~~~~~~---~~~~~~~-~~~~~~~~~~Li~~  417 (511)
                      |................. .....      .                 ....+.+   ....... ....+.++.+|+.+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  281 (333)
T cd06650         202 IPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNK  281 (333)
T ss_pred             CCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHH
Confidence            975432111100000000 00000      0                 0000000   0000000 01134678999999


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 010432          418 CLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       418 cl~~dP~~RPs~~eil~~  435 (511)
                      ||+.||++||++.+++.+
T Consensus       282 ~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         282 CLIKNPAERADLKQLMVH  299 (333)
T ss_pred             hccCCcccCcCHHHHhhC
Confidence            999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.6e-43  Score=361.97  Aligned_cols=254  Identities=25%  Similarity=0.302  Sum_probs=197.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .|++++.||+|+||+||+|++..         ++..||||++.....   .....+.+|+.+|++++|+|||++++++.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~---------~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~   72 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVD---------THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD   72 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec
Confidence            58889999999999999999865         678999999976432   223457899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+.++||||||++|+|.+++... ..+++..+..++.||+.||+|||+.+   |+||||||+||||+             
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~-------------  135 (381)
T cd05626          73 KDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILID-------------  135 (381)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEEC-------------
Confidence            99999999999999999998654 46889999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCc---------------------------------------------ce
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK---------------------------------------------TH  321 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~---------------------------------------------~~  321 (511)
                                  .++.+||+|||+++.......                                             ..
T Consensus       136 ------------~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (381)
T cd05626         136 ------------LDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRC  203 (381)
T ss_pred             ------------CCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccc
Confidence                        367899999999864311000                                             00


Q ss_pred             eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCC
Q 010432          322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG  401 (511)
Q Consensus       322 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (511)
                      .....+||+.|||||++.+..++.++|||||||++|||++|..||.........  ...    .....        .+..
T Consensus       204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~i----~~~~~--------~~~~  269 (381)
T cd05626         204 LAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQ--LKV----INWEN--------TLHI  269 (381)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHH--HHH----Hcccc--------ccCC
Confidence            012357999999999999899999999999999999999999999764322110  000    00000        0000


Q ss_pred             CCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHH
Q 010432          402 HFSIKGAQKAAQLAAHCL--SRDPKARPLMSEVVEA  435 (511)
Q Consensus       402 ~~~~~~~~~~~~Li~~cl--~~dP~~RPs~~eil~~  435 (511)
                      ......+.++.+||.+||  ..+|..||++.+|+.+
T Consensus       270 ~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         270 PPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             CCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            001123567889998844  5566669999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.8e-43  Score=368.96  Aligned_cols=262  Identities=24%  Similarity=0.372  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..+|++.++||+|+||.||+|.+..         +++.||||++....    ....+|+.+|+.++|+|||++++++...
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~---------~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~  131 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICID---------TSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTE  131 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECC---------CCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeec
Confidence            4679999999999999999999865         67799999986542    2345799999999999999999887532


Q ss_pred             --------CeEEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          208 --------DQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       208 --------~~~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                              ..+++||||++ ++|.+++.   .....+++..++.++.||+.||+|||+++   ||||||||+||||+.  
T Consensus       132 ~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~--  205 (440)
T PTZ00036        132 CFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDP--  205 (440)
T ss_pred             ccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcC--
Confidence                    24679999996 57877664   23457899999999999999999999998   999999999999984  


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVV  355 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvi  355 (511)
                                            +...+||+|||+|+.......   .....||+.|||||++.+. .|+.++|||||||+
T Consensus       206 ----------------------~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  260 (440)
T PTZ00036        206 ----------------------NTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCI  260 (440)
T ss_pred             ----------------------CCCceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHH
Confidence                                  245699999999987644322   2235789999999998764 68999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc--------c-----ccccccCCccCCCCCHHHHHHHHHHHHHhcccC
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER--------R-----RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~d  422 (511)
                      ||||++|.+||.+......  +...........        .     .+.......+...++...+.++.+||.+||+.|
T Consensus       261 l~elltG~~pf~~~~~~~~--~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d  338 (440)
T PTZ00036        261 IAEMILGYPIFSGQSSVDQ--LVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE  338 (440)
T ss_pred             HHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC
Confidence            9999999999976543211  111110000000        0     000000011111122233578999999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|||+.+++++
T Consensus       339 P~~R~ta~e~l~h  351 (440)
T PTZ00036        339 PLKRLNPIEALAD  351 (440)
T ss_pred             hhHCcCHHHHhCC
Confidence            9999999999975

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-43  Score=362.43  Aligned_cols=254  Identities=23%  Similarity=0.325  Sum_probs=200.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|++..         +++.||||++.....   .....+.+|+.+|..++|+||+++++++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~   71 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKD---------TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ   71 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE
Confidence            478999999999999999999876         678999999975421   22345778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++..|||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~------------  135 (364)
T cd05599          72 DENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLD------------  135 (364)
T ss_pred             cCCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEEC------------
Confidence            999999999999999999998654 46899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce------------------------------------eeeecccc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH------------------------------------VSTRVMGT  329 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~------------------------------------~~~~~~Gt  329 (511)
                                   .++.+||+|||+++.........                                    .....+||
T Consensus       136 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  202 (364)
T cd05599         136 -------------AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGT  202 (364)
T ss_pred             -------------CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccC
Confidence                         47789999999987543211000                                    01124699


Q ss_pred             ccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHH
Q 010432          330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ  409 (511)
Q Consensus       330 ~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (511)
                      +.|+|||++.+..++.++|||||||++|||++|..||........   ....   ......   ..   +..  ....++
T Consensus       203 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~---~~~i---~~~~~~---~~---~~~--~~~~s~  268 (364)
T cd05599         203 PDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQET---YRKI---INWKET---LQ---FPD--EVPLSP  268 (364)
T ss_pred             ccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHH---HHHH---HcCCCc---cC---CCC--CCCCCH
Confidence            999999999999999999999999999999999999975432111   1100   000000   00   000  112356


Q ss_pred             HHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010432          410 KAAQLAAHCLSRDPKARPL---MSEVVEA  435 (511)
Q Consensus       410 ~~~~Li~~cl~~dP~~RPs---~~eil~~  435 (511)
                      .+.+||.+||. +|.+|++   +.+++++
T Consensus       269 ~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         269 EAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             HHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            78899999996 9999998   8888775

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.3e-44  Score=329.00  Aligned_cols=256  Identities=26%  Similarity=0.365  Sum_probs=207.9

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----c----HHHHHHHHHHHhCC-CCCC
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----G----HKEWLAEVNFLGDL-VHLN  196 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----~----~~~~~~E~~il~~l-~H~n  196 (511)
                      .+-.+|...+.||.|..++|.++.++.         +|..+|+|++......    .    .+.-.+|+.||+++ .||+
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~---------t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~   84 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKE---------TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPY   84 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcc---------cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCc
Confidence            345678888999999999999998766         7889999998653221    1    23356799999999 6999


Q ss_pred             cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       197 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      |+++.+++..+..+|+|+|.|+.|.|.++|.. .-.+++.....|++|+..|++|||..+   ||||||||+|||++   
T Consensus        85 II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILld---  157 (411)
T KOG0599|consen   85 IIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLD---  157 (411)
T ss_pred             EEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeec---
Confidence            99999999999999999999999999999954 457899999999999999999999998   99999999999999   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc------CCCCccccch
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT------GHLTSRSDVY  350 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~------~~~~~~~DIw  350 (511)
                                            ++.++||+|||+|+.+..+..   ....||||+|+|||.+..      ..|+..+|+|
T Consensus       158 ----------------------dn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~W  212 (411)
T KOG0599|consen  158 ----------------------DNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEW  212 (411)
T ss_pred             ----------------------cccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHH
Confidence                                  689999999999999877654   345899999999998853      3688999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |+|||||.|+.|.+||.......      +.+......   ++.     ...-..+.+...++||.+||+.||.+|.|+.
T Consensus       213 a~GVImyTLLaGcpPFwHRkQml------MLR~ImeGk---yqF-----~speWadis~~~KdLIsrlLqVdp~~Ritak  278 (411)
T KOG0599|consen  213 ACGVIMYTLLAGCPPFWHRKQML------MLRMIMEGK---YQF-----RSPEWADISATVKDLISRLLQVDPTKRITAK  278 (411)
T ss_pred             HHHHHHHHHHcCCCchhHHHHHH------HHHHHHhcc---ccc-----CCcchhhccccHHHHHHHHHeeCchhcccHH
Confidence            99999999999999996432111      111111111   111     1122234567889999999999999999999


Q ss_pred             HHHHHh
Q 010432          431 EVVEAL  436 (511)
Q Consensus       431 eil~~L  436 (511)
                      |+|.+-
T Consensus       279 e~LaHp  284 (411)
T KOG0599|consen  279 EALAHP  284 (411)
T ss_pred             HHhcCh
Confidence            999753

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.4e-43  Score=359.84  Aligned_cols=255  Identities=25%  Similarity=0.330  Sum_probs=197.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|++..         +++.||||++.....   .....+.+|+.++.+++|+||+++++++.
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~   71 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKD---------TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ   71 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECC---------CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            478999999999999999998865         678999999975422   12245778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +...+|||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~------------  135 (363)
T cd05628          72 DKLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLD------------  135 (363)
T ss_pred             cCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEEC------------
Confidence            999999999999999999999654 47899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc---------------------------------eeeeeccccccc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---------------------------------HVSTRVMGTYGY  332 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---------------------------------~~~~~~~Gt~~y  332 (511)
                                   .++.+||+|||+++........                                 ......+||+.|
T Consensus       136 -------------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y  202 (363)
T cd05628         136 -------------SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDY  202 (363)
T ss_pred             -------------CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccc
Confidence                         4778999999999754321100                                 001235799999


Q ss_pred             cCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHH
Q 010432          333 AAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA  412 (511)
Q Consensus       333 ~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (511)
                      +|||++.+..++.++|||||||++|||++|+.||.........   ..+.   ....   ...   +...  ...+..+.
T Consensus       203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~---~~i~---~~~~---~~~---~p~~--~~~s~~~~  268 (363)
T cd05628         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETY---KKVM---NWKE---TLI---FPPE--VPISEKAK  268 (363)
T ss_pred             cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHH---HHHH---cCcC---ccc---CCCc--CCCCHHHH
Confidence            9999999999999999999999999999999999764322111   1000   0000   000   0110  11246778


Q ss_pred             HHHHHhcc--cCCCCCCCHHHHHHH
Q 010432          413 QLAAHCLS--RDPKARPLMSEVVEA  435 (511)
Q Consensus       413 ~Li~~cl~--~dP~~RPs~~eil~~  435 (511)
                      +||.+|+.  .++..||++.+|+++
T Consensus       269 ~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         269 DLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHHHHcCChhhcCCCCCHHHHhCC
Confidence            88888664  233356899999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6e-43  Score=359.52  Aligned_cols=262  Identities=20%  Similarity=0.218  Sum_probs=199.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..+|++++.||+|+||.||+|.+..         +++.||||....      ..+.+|+.+|++|+|||||++++++..+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~---------~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~  155 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNK---------TCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYN  155 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECC---------CCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEEC
Confidence            4679999999999999999999876         678999997542      3467899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++|||++ .++|..++... ..+++..++.|+.||+.||.|||+++   ||||||||+|||++              
T Consensus       156 ~~~~lv~e~~-~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~--------------  216 (391)
T PHA03212        156 KFTCLILPRY-KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFIN--------------  216 (391)
T ss_pred             CeeEEEEecC-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEc--------------
Confidence            9999999999 57898888554 46889999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||+||||++|+.||.
T Consensus       217 -----------~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~  284 (391)
T PHA03212        217 -----------HPGDVCLGDFGAACFPVDINAN-KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF  284 (391)
T ss_pred             -----------CCCCEEEEeCCccccccccccc-ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence                       4678999999999754322111 1234679999999999999999999999999999999999998876


Q ss_pred             CCCCCCc-----hhHHHhhhhhh--ccc---------cccc-cc-----cCCccCCCC--CHHHHHHHHHHHHHhcccCC
Q 010432          368 KNRPNGE-----HNLVEWARPHL--GER---------RRFY-RL-----IDPRLEGHF--SIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       368 ~~~~~~~-----~~~~~~~~~~~--~~~---------~~~~-~~-----~~~~~~~~~--~~~~~~~~~~Li~~cl~~dP  423 (511)
                      .......     ..+........  ...         ...+ ..     ..+......  ....+.++.+||.+||+.||
T Consensus       285 ~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP  364 (391)
T PHA03212        285 EKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDA  364 (391)
T ss_pred             CcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCCh
Confidence            4322110     01110000000  000         0000 00     000000000  01235678999999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      .+|||+.|++++
T Consensus       365 ~~Rpta~elL~h  376 (391)
T PHA03212        365 HHRPSAEALLDF  376 (391)
T ss_pred             hhCCCHHHHhcC
Confidence            999999999974

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=7.2e-43  Score=350.84  Aligned_cols=246  Identities=26%  Similarity=0.394  Sum_probs=194.5

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHH---hCCCCCCcceEeeEE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFL---GDLVHLNLVKLIGYC  204 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il---~~l~H~nIv~l~~~~  204 (511)
                      |++++.||+|+||.||+|.+..         +++.||||+++....   ...+.+.+|++++   +.++||||+++++++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~   71 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKK---------TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF   71 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE
Confidence            6778899999999999998865         678999999975421   2234566676655   567899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..|+||||+++|+|..++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++           
T Consensus        72 ~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~-----------  135 (324)
T cd05589          72 QTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLD-----------  135 (324)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEEC-----------
Confidence            999999999999999999988753  46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.......  .....+||+.|||||++.+..++.++|||||||++|||++|+.
T Consensus       136 --------------~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~  199 (324)
T cd05589         136 --------------TEGFVKIADFGLCKEGMGFGD--RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGES  199 (324)
T ss_pred             --------------CCCcEEeCcccCCccCCCCCC--cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCC
Confidence                          477899999999875433221  1234679999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      ||.......   ....   .....        .    .++...+..+.+||.+||+.||.+||     ++.+++++
T Consensus       200 pf~~~~~~~---~~~~---i~~~~--------~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         200 PFPGDDEEE---VFDS---IVNDE--------V----RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             CCCCCCHHH---HHHH---HHhCC--------C----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            997543211   1110   00000        0    11122356788999999999999999     45666553

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2.3e-43  Score=354.67  Aligned_cols=244  Identities=30%  Similarity=0.380  Sum_probs=196.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      +.||+|+||.||+|++..         ++..||+|++.....   .....+.+|++++..++||||+++++++...+..|
T Consensus         1 ~~lG~G~~g~V~~~~~~~---------~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~   71 (325)
T cd05594           1 KLLGKGTFGKVILVKEKA---------TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC   71 (325)
T ss_pred             CeeeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEE
Confidence            369999999999998865         678999999976422   22345678999999999999999999999999999


Q ss_pred             EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||||+++|+|..++... ..+++..+..++.||+.||.|||+ .+   |+||||||+|||++                 
T Consensus        72 lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~-----------------  130 (325)
T cd05594          72 FVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLD-----------------  130 (325)
T ss_pred             EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEEC-----------------
Confidence            999999999999888543 468999999999999999999997 67   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++........  .....||+.|||||++.+..++.++|||||||+||||++|+.||....
T Consensus       131 --------~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~  200 (325)
T cd05594         131 --------KDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  200 (325)
T ss_pred             --------CCCCEEEecCCCCeecCCCCcc--cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence                    4778999999999754322211  223579999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHh
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  436 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~L  436 (511)
                      ...   .....   ...        ..    .++...+.++.+|+.+||+.||++|+     ++.+++++-
T Consensus       201 ~~~---~~~~i---~~~--------~~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  253 (325)
T cd05594         201 HEK---LFELI---LME--------EI----RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK  253 (325)
T ss_pred             HHH---HHHHH---hcC--------CC----CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence            211   11110   000        00    11122356789999999999999996     899998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-42  Score=339.25  Aligned_cols=260  Identities=26%  Similarity=0.434  Sum_probs=208.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||.||+|.+...+.      +...||||.++..... ....|.+|+.++++++|+||+++++++...
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~------~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   77 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGK------KEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS   77 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCC------CcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC
Confidence            578899999999999999999865321      3568999998765432 235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++......+++..++.++.|++.||.|||+++   |+|+||||+|||++              
T Consensus        78 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~--------------  140 (266)
T cd05033          78 RPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVN--------------  140 (266)
T ss_pred             CceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEc--------------
Confidence            9999999999999999999766667899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 ++..+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       141 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~  209 (266)
T cd05033         141 -----------SNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPY  209 (266)
T ss_pred             -----------CCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCC
Confidence                       477899999999998753222222222345678999999998899999999999999999998 99998


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ......   ........    .          .....+...+..+.+|+.+||+.+|++||++.+|+++|+.+
T Consensus       210 ~~~~~~---~~~~~~~~----~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         210 WDMSNQ---DVIKAVED----G----------YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCHH---HHHHHHHc----C----------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            643211   11111110    0          00011122356789999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=7e-43  Score=342.97  Aligned_cols=261  Identities=30%  Similarity=0.438  Sum_probs=207.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|.+.+.||+|+||.||+|.+....    ...++..||||.++..... ....+.+|+++|++++|+||+++++++..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   79 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLE----PENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE   79 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeecccc----CcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec
Confidence            356888899999999999999875421    0124678999999765443 34678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS-------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~-------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      ....++||||+++|+|.+++....             ..+++..+..++.||+.||.|||+++   |+||||||+|||++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~  156 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVG  156 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEc
Confidence            999999999999999999996432             34788889999999999999999998   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                               .++.+||+|||+++...............+++.|+|||++.+..++.++||||||
T Consensus       157 -------------------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  211 (280)
T cd05049         157 -------------------------YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  211 (280)
T ss_pred             -------------------------CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHH
Confidence                                     4788999999999865433322222334567899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          354 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       354 vil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |++|||++ |..||......   .........              .....+...+..+.+|+.+||+.||++||++.||
T Consensus       212 ~il~e~~~~g~~p~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  274 (280)
T cd05049         212 VVLWEIFTYGKQPWYGLSNE---EVIECITQG--------------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDI  274 (280)
T ss_pred             HHHHHHHhcCCCCCCCCCHH---HHHHHHHcC--------------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            99999998 99998654321   111111100              0011112235778999999999999999999999


Q ss_pred             HHHhc
Q 010432          433 VEALK  437 (511)
Q Consensus       433 l~~L~  437 (511)
                      ++.|+
T Consensus       275 l~~l~  279 (280)
T cd05049         275 HERLQ  279 (280)
T ss_pred             HHHhh
Confidence            99886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.4e-43  Score=354.96  Aligned_cols=267  Identities=25%  Similarity=0.350  Sum_probs=197.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.++||+|+||.||+|++..         ++..||||++....  ......+.+|+.+|++++||||+++++++...
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   71 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTH---------TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPP   71 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECC---------CCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEecc
Confidence            47888999999999999999865         67899999987432  22234688999999999999999999988643


Q ss_pred             -----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          208 -----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       208 -----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                           ...|+||||| +++|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++         
T Consensus        72 ~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~---------  137 (338)
T cd07859          72 SRREFKDIYVVFELM-ESDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILAN---------  137 (338)
T ss_pred             CCCCCceEEEEEecC-CCCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEC---------
Confidence                 2479999999 57999988544 46899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCccccc--CCCCccccchhHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~el  359 (511)
                                      .++.+||+|||+++........ .......||+.|+|||++.+  ..++.++|||||||++|||
T Consensus       138 ----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el  201 (338)
T cd07859         138 ----------------ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV  201 (338)
T ss_pred             ----------------CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHH
Confidence                            4778999999999864332211 11234579999999998865  6789999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhh--------hhc--cccccccccCCccCCCCC---HHHHHHHHHHHHHhcccCCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARP--------HLG--ERRRFYRLIDPRLEGHFS---IKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      ++|+.||...........+.....        ...  ....+...+.......+.   ...+..+.+|+.+||+.||++|
T Consensus       202 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  281 (338)
T cd07859         202 LTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDR  281 (338)
T ss_pred             HcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccC
Confidence            999999976432111110000000        000  000000000000000000   0124567899999999999999


Q ss_pred             CCHHHHHHH
Q 010432          427 PLMSEVVEA  435 (511)
Q Consensus       427 Ps~~eil~~  435 (511)
                      |++.+++++
T Consensus       282 pt~~e~l~h  290 (338)
T cd07859         282 PTAEEALAD  290 (338)
T ss_pred             CCHHHHhcC
Confidence            999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.1e-43  Score=350.73  Aligned_cols=246  Identities=29%  Similarity=0.378  Sum_probs=196.2

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+++...+.      .+++.||||+++....    .....+.+|+.+|+.++||||+++++++..++..
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~   75 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGA------DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKL   75 (323)
T ss_pred             ceeeecCCeEEEEEEEcccC------CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeE
Confidence            57999999999999875322      2678999999975321    2224567899999999999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |+||||+++|+|.+++... ..+.+..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        76 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~-----------------  134 (323)
T cd05584          76 YLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLD-----------------  134 (323)
T ss_pred             EEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEC-----------------
Confidence            9999999999999998654 46788888999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       135 --------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~  204 (323)
T cd05584         135 --------AQGHVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN  204 (323)
T ss_pred             --------CCCCEEEeeCcCCeecccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence                    477899999999975433221  1233579999999999998889999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      ...   .   ........            ..++...+..+.+||.+||+.||.+||     ++.+++++
T Consensus       205 ~~~---~---~~~~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         205 RKK---T---IDKILKGK------------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             HHH---H---HHHHHcCC------------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            211   1   11100000            011122356789999999999999999     78888765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4e-43  Score=353.58  Aligned_cols=254  Identities=24%  Similarity=0.268  Sum_probs=203.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|.+.+.||+|+||.||+|++..         +++.||||+++....   .....+.+|+.+++.++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~   71 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKA---------TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ   71 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe
Confidence            368899999999999999999875         677999999976432   22345778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+..+|||||+++|+|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~------------  136 (330)
T cd05601          72 DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLID------------  136 (330)
T ss_pred             cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEEC------------
Confidence            999999999999999999999776567999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc------cCCCCccccchhHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM------TGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~------~~~~~~~~DIwSlGvil~el  359 (511)
                                   .++.+||+|||++......... ......||+.|+|||++.      ...++.++|||||||++|||
T Consensus       137 -------------~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el  202 (330)
T cd05601         137 -------------RTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM  202 (330)
T ss_pred             -------------CCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeee
Confidence                         4778999999999876543322 223357999999999986      45678999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ++|+.||........   .   ...... ......     .  .....+..+.+|+.+||+ +|.+||++.+++++
T Consensus       203 ~~g~~Pf~~~~~~~~---~---~~i~~~-~~~~~~-----~--~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         203 IYGRSPFHEGTSAKT---Y---NNIMNF-QRFLKF-----P--EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             ccCCCCCCCCCHHHH---H---HHHHcC-CCccCC-----C--CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            999999975432111   0   000000 000000     0  011235678999999998 99999999999865

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=3.1e-43  Score=355.23  Aligned_cols=265  Identities=28%  Similarity=0.410  Sum_probs=205.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+...+    ...+++.||+|+++..... ....+.+|+.++.++ +|+||++++++|
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~----~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~   80 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIE----KSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGAC   80 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccc----cccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence            3467999999999999999999764321    1235689999999754322 234678899999999 899999999988


Q ss_pred             Ee-CCeEEEEEEccCCCCHHHHHhhCC-----------------------------------------------------
Q 010432          205 IE-DDQRLLVYEFMPRGSLENHLFRRS-----------------------------------------------------  230 (511)
Q Consensus       205 ~~-~~~~~lv~E~~~~g~L~~~l~~~~-----------------------------------------------------  230 (511)
                      .. +..++++|||+++|+|.+++....                                                     
T Consensus        81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
T cd05054          81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE  160 (337)
T ss_pred             ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence            65 456889999999999999885321                                                     


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCce
Q 010432          231 -------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA  303 (511)
Q Consensus       231 -------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (511)
                             ..+++..+..++.||+.||.|||+++   |+||||||+|||++                         +++.+
T Consensus       161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~-------------------------~~~~v  212 (337)
T cd05054         161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLS-------------------------ENNVV  212 (337)
T ss_pred             hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEe-------------------------CCCcE
Confidence                   25788999999999999999999988   99999999999998                         46789


Q ss_pred             eeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhh
Q 010432          304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWAR  382 (511)
Q Consensus       304 kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~  382 (511)
                      ||+|||+++...............++..|+|||++.+..++.++|||||||+||||++ |..||.......  .+...  
T Consensus       213 kL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~~~--  288 (337)
T cd05054         213 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFCRR--  288 (337)
T ss_pred             EEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHHHH--
Confidence            9999999987644332222233456788999999999999999999999999999998 999997543211  11111  


Q ss_pred             hhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          383 PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                        .....          ....+...+..+.+|+.+||+.+|++||++.+|+++|+.+
T Consensus       289 --~~~~~----------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         289 --LKEGT----------RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             --HhccC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              10000          0011122346789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-43  Score=360.16  Aligned_cols=255  Identities=28%  Similarity=0.338  Sum_probs=204.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|++..         +++.||||+++....   .....+.+|+.+|..++|+||+++++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKD---------TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ   71 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECC---------CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee
Confidence            368899999999999999999875         678999999975422   22356788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++..|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+++   |+||||||+||||+            
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~------------  135 (350)
T cd05573          72 DEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILID------------  135 (350)
T ss_pred             cCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEEC------------
Confidence            999999999999999999999765 57899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCC---------------------------cceeeeeccccccccCCccc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD---------------------------KTHVSTRVMGTYGYAAPEYV  338 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~---------------------------~~~~~~~~~Gt~~y~aPE~~  338 (511)
                                   .++.+||+|||+++......                           .........||+.|+|||++
T Consensus       136 -------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  202 (350)
T cd05573         136 -------------ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVL  202 (350)
T ss_pred             -------------CCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence                         47789999999998755432                           00112335799999999999


Q ss_pred             ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHh
Q 010432          339 MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC  418 (511)
Q Consensus       339 ~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~c  418 (511)
                      .+..++.++|||||||+||||++|+.||..........      .... ..       ..+........+..+.+||.+|
T Consensus       203 ~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~------~i~~-~~-------~~~~~p~~~~~~~~~~~li~~l  268 (350)
T cd05573         203 RGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN------KIIN-WK-------ESLRFPPDPPVSPEAIDLICRL  268 (350)
T ss_pred             cCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH------HHhc-cC-------CcccCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999997654211100      0000 00       0000000011357889999999


Q ss_pred             cccCCCCCCC-HHHHHHHh
Q 010432          419 LSRDPKARPL-MSEVVEAL  436 (511)
Q Consensus       419 l~~dP~~RPs-~~eil~~L  436 (511)
                      |. ||.+||+ +.+++++.
T Consensus       269 l~-dp~~R~~s~~~ll~hp  286 (350)
T cd05573         269 LC-DPEDRLGSFEEIKSHP  286 (350)
T ss_pred             cc-ChhhcCCCHHHHhcCC
Confidence            97 9999999 99999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=3.7e-43  Score=361.04  Aligned_cols=253  Identities=26%  Similarity=0.309  Sum_probs=197.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .|+++++||+|+||.||+|++..         +++.||||++.....   .....+.+|+.+|++++|+|||++++++.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~---------~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~   72 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVD---------TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD   72 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECC---------CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe
Confidence            58889999999999999999875         677999999975432   223467889999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++.+|||||||++|+|.+++.+. ..+++..+..++.||+.||+|||+++   ||||||||+|||++             
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~-------------  135 (382)
T cd05625          73 KDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILID-------------  135 (382)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC-------------
Confidence            99999999999999999998654 46889999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCC---------------------------------------------cce
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD---------------------------------------------KTH  321 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~---------------------------------------------~~~  321 (511)
                                  .++.+||+|||+++......                                             ...
T Consensus       136 ------------~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (382)
T cd05625         136 ------------RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRC  203 (382)
T ss_pred             ------------CCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence                        47789999999985321000                                             000


Q ss_pred             eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCC
Q 010432          322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG  401 (511)
Q Consensus       322 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (511)
                      .....+||+.|+|||++.+..|+.++|||||||+||||++|+.||.........  ...    ....        ..+..
T Consensus       204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~--~~i----~~~~--------~~~~~  269 (382)
T cd05625         204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQ--MKV----INWQ--------TSLHI  269 (382)
T ss_pred             cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHH--HHH----HccC--------CCcCC
Confidence            012357999999999999999999999999999999999999999765332110  000    0000        00000


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010432          402 HFSIKGAQKAAQLAAHCLSRDPKARPL---MSEVVEA  435 (511)
Q Consensus       402 ~~~~~~~~~~~~Li~~cl~~dP~~RPs---~~eil~~  435 (511)
                      ......++++.+||.+|+ .+|.+|++   +.+++++
T Consensus       270 p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         270 PPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             CCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            001123567888998876 59999997   8887764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-43  Score=360.92  Aligned_cols=255  Identities=23%  Similarity=0.296  Sum_probs=198.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||.||+|++..         +++.||||++.....   .....+.+|+++|++++|||||++++++.
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~   71 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKD---------TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ   71 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECC---------CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            478899999999999999998875         678999999865321   22345788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++..|||||||++|+|.+++... ..+++..+..++.|++.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~------------  135 (377)
T cd05629          72 DAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILID------------  135 (377)
T ss_pred             cCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEC------------
Confidence            999999999999999999998653 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc---------------------------------------------
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---------------------------------------------  320 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---------------------------------------------  320 (511)
                                   .++.+||+|||+++........                                             
T Consensus       136 -------------~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (377)
T cd05629         136 -------------RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRR  202 (377)
T ss_pred             -------------CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc
Confidence                         4778999999999632210000                                             


Q ss_pred             eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccC
Q 010432          321 HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE  400 (511)
Q Consensus       321 ~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (511)
                      ......+||+.|+|||++.+..++.++|||||||+||||++|..||........   ....   ......   +   .+.
T Consensus       203 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~---~~~i---~~~~~~---~---~~p  270 (377)
T cd05629         203 LMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHET---YRKI---INWRET---L---YFP  270 (377)
T ss_pred             ccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHH---HHHH---HccCCc---c---CCC
Confidence            000124699999999999999999999999999999999999999975432111   0000   000000   0   000


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHh
Q 010432          401 GHFSIKGAQKAAQLAAHCLSRDPKAR---PLMSEVVEAL  436 (511)
Q Consensus       401 ~~~~~~~~~~~~~Li~~cl~~dP~~R---Ps~~eil~~L  436 (511)
                      .  ....+.++.+||.+||. +|.+|   +++.+++.+-
T Consensus       271 ~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp  306 (377)
T cd05629         271 D--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP  306 (377)
T ss_pred             C--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence            0  01124678999999997 77765   5999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=7.7e-43  Score=350.63  Aligned_cols=242  Identities=27%  Similarity=0.362  Sum_probs=194.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCC-CcceEeeEEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHL-NLVKLIGYCI  205 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~-nIv~l~~~~~  205 (511)
                      +|++++.||+|+||.||+|++..         +++.||||++.....   ...+.+..|+.++..+.|+ +|+++++++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~   71 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKG---------TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ   71 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE
Confidence            58889999999999999999865         677999999975421   2335678899999999765 5888999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~------------  135 (324)
T cd05587          72 TMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLD------------  135 (324)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEc------------
Confidence            999999999999999999988654 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       136 -------------~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p  200 (324)
T cd05587         136 -------------AEGHIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP  200 (324)
T ss_pred             -------------CCCCEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence                         477899999999875432221  12345799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      |......   .......   ..            ...++...+..+.+|+.+||+.||.+|++.
T Consensus       201 f~~~~~~---~~~~~i~---~~------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         201 FDGEDED---ELFQSIM---EH------------NVSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCCHH---HHHHHHH---cC------------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            9754321   1111110   00            011112235678999999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=9.1e-43  Score=344.18  Aligned_cols=266  Identities=24%  Similarity=0.322  Sum_probs=197.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCC---CCCCcceEeeE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDL---VHLNLVKLIGY  203 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l---~H~nIv~l~~~  203 (511)
                      ++|++.+.||+|+||.||+|++...        ++..||||+++.....  ....+.+|+.+++.+   +||||++++++
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~   72 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKN--------GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDV   72 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCC--------CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEE
Confidence            3689999999999999999987531        4678999998754322  224566788777765   69999999998


Q ss_pred             EEe-----CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          204 CIE-----DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       204 ~~~-----~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      +..     ...+++||||+. ++|.+++... ...+++..++.++.||+.||.|||+++   |+||||||+|||++    
T Consensus        73 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~----  144 (290)
T cd07862          73 CTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVT----  144 (290)
T ss_pred             EecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEc----
Confidence            852     456899999995 6999998653 345899999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           .++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       145 ---------------------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~  200 (290)
T cd07862         145 ---------------------SSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA  200 (290)
T ss_pred             ---------------------CCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHH
Confidence                                 47789999999998654331   123457899999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhccccccc-------cccCCccC---CCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFY-------RLIDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      ||++|++||...........+..... ......+.       ........   .......+..+.+|+.+||+.||++||
T Consensus       201 el~~g~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  279 (290)
T cd07862         201 EMFRRKPLFRGSSDVDQLGKILDVIG-LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI  279 (290)
T ss_pred             HHHcCCCCcCCCCHHHHHHHHHHHhC-CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcC
Confidence            99999999986543221111100000 00000000       00000000   001112356788999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      |+.+++++
T Consensus       280 s~~~~l~h  287 (290)
T cd07862         280 SAYSALSH  287 (290)
T ss_pred             CHHHHhcC
Confidence            99999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1e-42  Score=350.46  Aligned_cols=250  Identities=25%  Similarity=0.363  Sum_probs=195.5

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|++..         +++.||||+++.....   ....+.+|..++..+ +||||+++++++...+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~---------~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~   71 (329)
T cd05588           1 RVIGRGSYAKVLLVELKK---------TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRL   71 (329)
T ss_pred             CeEeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEE
Confidence            369999999999999876         6779999999864322   234577899999998 799999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||||||++|+|..++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~-----------------  130 (329)
T cd05588          72 FFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLD-----------------  130 (329)
T ss_pred             EEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEC-----------------
Confidence            9999999999999888544 57999999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       131 --------~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~  200 (329)
T cd05588         131 --------AEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  200 (329)
T ss_pred             --------CCCCEEECcCccccccccCCC--ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccc
Confidence                    477899999999975322211  1234679999999999999999999999999999999999999996432


Q ss_pred             CCC--chhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 010432          371 PNG--EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL------MSEVVEA  435 (511)
Q Consensus       371 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs------~~eil~~  435 (511)
                      ...  ......+.......         ..  ..++...+..+.+||.+||+.||.+||+      +.+++++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~---------~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         201 MSDNPDQNTEDYLFQVILE---------KQ--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             ccccccccchHHHHHHHHc---------CC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            211  11111111111100         00  0112223567899999999999999997      5666654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=6.8e-43  Score=342.88  Aligned_cols=262  Identities=26%  Similarity=0.418  Sum_probs=205.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|.+...    ....++..||||.+..... ....++.+|+.+++.++|+||+++++++.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~----~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   79 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGV----VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccC----CCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            467899999999999999999987531    1123567899999865432 23346889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      .+...++||||+++|+|.+++....         ..+++..++.++.|++.||.|||+.+   ++||||||+|||++   
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~---  153 (277)
T cd05062          80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA---  153 (277)
T ss_pred             CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEc---
Confidence            9999999999999999999986422         23567888999999999999999988   99999999999998   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil  356 (511)
                                            +++.+||+|||+++...............+++.|||||++.+..++.++|||||||++
T Consensus       154 ----------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  211 (277)
T cd05062         154 ----------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL  211 (277)
T ss_pred             ----------------------CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence                                  4778999999999865443332222233567889999999988999999999999999


Q ss_pred             HHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |||++ |..||......   ........    . .         ....+...+..+.+|+.+||+.||++||++.++++.
T Consensus       212 ~el~~~~~~p~~~~~~~---~~~~~~~~----~-~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         212 WEIATLAEQPYQGMSNE---QVLRFVME----G-G---------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHHHcCCCCCCCCCCHH---HHHHHHHc----C-C---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999 68888654321   11111100    0 0         001112234678999999999999999999999998


Q ss_pred             hc
Q 010432          436 LK  437 (511)
Q Consensus       436 L~  437 (511)
                      |+
T Consensus       275 l~  276 (277)
T cd05062         275 IK  276 (277)
T ss_pred             hh
Confidence            86

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.5e-42  Score=336.37  Aligned_cols=251  Identities=27%  Similarity=0.446  Sum_probs=201.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++.+.||+|+||.||++.++.          +..||+|.+..... ....+.+|+.+|++++||||+++++++...+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~----------~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA----------QIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK   72 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc----------CceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence            458888999999999999998753          45799999875432 3467889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++|+|.+++......+++..++.++.|++.||.|||+++   |+||||||+||+++               
T Consensus        73 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~---------------  134 (256)
T cd05114          73 PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVS---------------  134 (256)
T ss_pred             CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEc---------------
Confidence            999999999999999999765556899999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                +++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus       135 ----------~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~  203 (256)
T cd05114         135 ----------STGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFE  203 (256)
T ss_pred             ----------CCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCC
Confidence                      4678999999999865432221 1122345678999999988899999999999999999999 899996


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .....   ........    ..   ....       +...+..+.+|+.+||+.||.+||++.+|++.|
T Consensus       204 ~~~~~---~~~~~i~~----~~---~~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         204 KKSNY---EVVEMISR----GF---RLYR-------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCHH---HHHHHHHC----CC---CCCC-------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            54321   11111110    00   0001       111246789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.5e-43  Score=352.19  Aligned_cols=242  Identities=29%  Similarity=0.363  Sum_probs=194.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~l  212 (511)
                      +.||+|+||.||+++.....      .+|..||+|++......  ....+.+|+.+|++++||||+++++++..++..|+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   75 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGP------DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYL   75 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccC------CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEE
Confidence            57999999999999874321      26889999999754322  23456789999999999999999999999999999


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      ||||+++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                   
T Consensus        76 v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~-------------------  132 (318)
T cd05582          76 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLD-------------------  132 (318)
T ss_pred             EEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEEC-------------------
Confidence            99999999999998554 46899999999999999999999998   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  372 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~  372 (511)
                            +++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus       133 ------~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~  204 (318)
T cd05582         133 ------EEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK  204 (318)
T ss_pred             ------CCCcEEEeeccCCcccCCCCC--ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH
Confidence                  477899999999986544322  123467999999999999888999999999999999999999999754321


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                         ......   ....            ..++...+..+.+||.+||+.||.+||++.+
T Consensus       205 ---~~~~~i---~~~~------------~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         205 ---ETMTMI---LKAK------------LGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             ---HHHHHH---HcCC------------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence               111110   0000            0112223567899999999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.4e-42  Score=335.61  Aligned_cols=249  Identities=26%  Similarity=0.397  Sum_probs=197.8

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.||+|+||.||+|.+..         +++.||+|.+..... .....+.+|++++++++|+||+++++++......++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   71 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRA---------DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV   71 (252)
T ss_pred             CccCcccCccEEEEEEec---------CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEE
Confidence            369999999999999865         577999998865432 2235688999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++++|.+++......+++..++.++.|++.||.|||+++   |+||||||+|||++                    
T Consensus        72 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~--------------------  128 (252)
T cd05084          72 MELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVT--------------------  128 (252)
T ss_pred             EeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEc--------------------
Confidence            9999999999999766567899999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPN  372 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~  372 (511)
                           .++.+||+|||++................++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus       129 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~  203 (252)
T cd05084         129 -----EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ  203 (252)
T ss_pred             -----CCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH
Confidence                 467799999999986543221111111123567999999998899999999999999999998 88888643221


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .   ....    ..          .......+...+..+.+|+.+||+.||++||++.+|++.|+
T Consensus       204 ~---~~~~----~~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         204 Q---TREA----IE----------QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             H---HHHH----HH----------cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            1   0000    00          00111122233578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.5e-42  Score=341.53  Aligned_cols=260  Identities=26%  Similarity=0.440  Sum_probs=205.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|++.+.||+|+||.||+|.+...+.     ..+..||+|.+...... ....+.+|+.++++++|+||+++++++..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGM-----DHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCC-----CCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence            467888999999999999998643211     25678999999754322 235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR----------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~----------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      +..|+||||+++|+|.+++..+                ...+++..++.++.|++.||.|||+++   |+||||||+|||
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nil  156 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNIL  156 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEE
Confidence            9999999999999999998532                124788889999999999999999988   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      ++                         ++..+||+|||+++...............++..|+|||++.+..++.++||||
T Consensus       157 i~-------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  211 (283)
T cd05090         157 IG-------------------------EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWS  211 (283)
T ss_pred             Ec-------------------------CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHH
Confidence            98                         46779999999998764433222233345678899999998888999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          352 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       352 lGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |||++|||++ |..||......   .........    .          ....+...+..+.+++.+||+.||.+||++.
T Consensus       212 lG~il~el~~~g~~p~~~~~~~---~~~~~~~~~----~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  274 (283)
T cd05090         212 FGVVLWEIFSFGLQPYYGFSNQ---EVIEMVRKR----Q----------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFK  274 (283)
T ss_pred             HHHHHHHHHcCCCCCCCCCCHH---HHHHHHHcC----C----------cCCCCCCCCHHHHHHHHHHcccCcccCcCHH
Confidence            9999999998 99998654321   111111110    0          0011122356789999999999999999999


Q ss_pred             HHHHHhcC
Q 010432          431 EVVEALKP  438 (511)
Q Consensus       431 eil~~L~~  438 (511)
                      +|++.|..
T Consensus       275 ~i~~~l~~  282 (283)
T cd05090         275 DIHTRLRS  282 (283)
T ss_pred             HHHHHhhc
Confidence            99998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-45  Score=336.34  Aligned_cols=248  Identities=27%  Similarity=0.394  Sum_probs=212.8

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      |.++.+||+|+||.||+|.++.         +|+.||||.+..+.  +..+++.|+.||.+++.+++|++||.+.....+
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~E---------sG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDL  103 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRE---------SGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDL  103 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhc---------cCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCce
Confidence            5567789999999999998876         78899999997653  456789999999999999999999999998899


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||||||-.|++.+.++.+..++.+..+..+++..+.||+|||...   -||||||..||||..                
T Consensus       104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT----------------  164 (502)
T KOG0574|consen  104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNT----------------  164 (502)
T ss_pred             EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcc----------------
Confidence            9999999999999999988889999999999999999999999987   899999999999984                


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                               ++.+||+|||.|-.+.+.-.  ..+++.||+.|||||++..-.|+.++||||||++..||..|++||.+..
T Consensus       165 ---------~G~AKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH  233 (502)
T KOG0574|consen  165 ---------DGIAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH  233 (502)
T ss_pred             ---------cchhhhhhccccchhhhhHH--hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc
Confidence                     88899999999987655322  2456789999999999999999999999999999999999999998665


Q ss_pred             CCCchhHHHhhhhhhccccccccc-cCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRL-IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +...                ++-+ ..|.....-+..++.++.++++.||..+|++|-|+.+++++
T Consensus       234 PMRA----------------IFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  234 PMRA----------------IFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             ccce----------------eEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            4321                1111 11111222356678999999999999999999999999875

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=9.7e-43  Score=348.65  Aligned_cols=242  Identities=28%  Similarity=0.418  Sum_probs=192.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|++..         +++.||||+++....   .....+..|..++..+ +||||+++++++..++..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~   71 (316)
T cd05592           1 KVLGKGSFGKVMLAELKG---------TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHL   71 (316)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEE
Confidence            369999999999999865         677999999975421   2233456677777654 899999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++|+|..++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~-----------------  130 (316)
T cd05592          72 FFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLD-----------------  130 (316)
T ss_pred             EEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEEC-----------------
Confidence            9999999999999988654 46899999999999999999999988   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus       131 --------~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~  200 (316)
T cd05592         131 --------KDGHIKIADFGMCKENMNGEG--KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED  200 (316)
T ss_pred             --------CCCCEEEccCcCCeECCCCCC--ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Confidence                    477899999999986433221  2334679999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVE  434 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~-eil~  434 (511)
                      ..   .+....   ...            ...++...+.++.+|+.+||+.||.+||++. ++++
T Consensus       201 ~~---~~~~~i---~~~------------~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         201 ED---ELFDSI---LND------------RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HH---HHHHHH---HcC------------CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            21   111111   000            0111222356788999999999999999875 5554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2e-42  Score=356.52  Aligned_cols=267  Identities=24%  Similarity=0.252  Sum_probs=204.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ...+|++++.||+|+||.||+|.....       .++..||||.+...     ..+.+|+.+|++|+|+|||++++++..
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~-------~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~  157 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGD-------EQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW  157 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCC-------ccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee
Confidence            346799999999999999999976432       24678999998654     235689999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....|+|||++ +++|.+++ .....+++..++.|+.||+.||.|||+++   ||||||||+|||++             
T Consensus       158 ~~~~~lv~e~~-~~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~-------------  219 (392)
T PHA03207        158 KSTVCMVMPKY-KCDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLD-------------  219 (392)
T ss_pred             CCEEEEEehhc-CCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEc-------------
Confidence            99999999999 46899988 44457999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||+++...............||+.|+|||++.+..|+.++|||||||+||||++|+.||
T Consensus       220 ------------~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf  287 (392)
T PHA03207        220 ------------EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL  287 (392)
T ss_pred             ------------CCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                        47789999999998765443322233467999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhcccc-ccc-----------cccCCccCCCCC-------HHHHHHHHHHHHHhcccCCCCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERR-RFY-----------RLIDPRLEGHFS-------IKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~-------~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      .+............+...+.... .+.           ..........+.       ...+.++.+||.+||..||.+||
T Consensus       288 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp  367 (392)
T PHA03207        288 FGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP  367 (392)
T ss_pred             CCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC
Confidence            77554322111111110000000 000           000000000000       11245788999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+++.+
T Consensus       368 sa~e~l~~  375 (392)
T PHA03207        368 SAQDILSL  375 (392)
T ss_pred             CHHHHhhC
Confidence            99999986

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2e-43  Score=362.20  Aligned_cols=254  Identities=24%  Similarity=0.279  Sum_probs=199.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .+|++++.||+|+||.||+|++..         +++.||||++.....   .....+.+|+.+|++++|+||+++++++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~   71 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVD---------TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ   71 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC---------CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            368999999999999999999875         678999999965321   22345788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++.+|||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~------------  135 (376)
T cd05598          72 DKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILID------------  135 (376)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEEC------------
Confidence            999999999999999999999654 46888999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCC-----------------------------------------cceeee
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD-----------------------------------------KTHVST  324 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~-----------------------------------------~~~~~~  324 (511)
                                   .++.+||+|||+|.......                                         ......
T Consensus       136 -------------~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (376)
T cd05598         136 -------------RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAH  202 (376)
T ss_pred             -------------CCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccccc
Confidence                         47789999999985321000                                         000012


Q ss_pred             eccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCC
Q 010432          325 RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS  404 (511)
Q Consensus       325 ~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (511)
                      ..+||+.|||||++.+..++.++|||||||+||||++|+.||...........   .   . ....       .+.....
T Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~---i---~-~~~~-------~~~~~~~  268 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLK---V---I-NWET-------TLHIPSQ  268 (376)
T ss_pred             ccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHH---H---h-ccCc-------cccCCCC
Confidence            35799999999999999999999999999999999999999976543211100   0   0 0000       0000011


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 010432          405 IKGAQKAAQLAAHCLSRDPKARP---LMSEVVEA  435 (511)
Q Consensus       405 ~~~~~~~~~Li~~cl~~dP~~RP---s~~eil~~  435 (511)
                      ...+..+.+||.+|+ .+|.+|+   ++.+++++
T Consensus       269 ~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         269 AKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            123467788999977 5999999   89999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-42  Score=342.57  Aligned_cols=252  Identities=29%  Similarity=0.405  Sum_probs=202.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      +|++.++||+|+||.||++.+..         +++.||||++......   ....+.+|+.+++.++|+||+++++++..
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   71 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRA---------TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET   71 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcC---------CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC
Confidence            47888999999999999998865         5779999999754322   22457789999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~------------  136 (285)
T cd05605          72 KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLD------------  136 (285)
T ss_pred             CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEEC------------
Confidence            99999999999999999888653 346899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.++|+|||++........   .....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       137 -------------~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~p  200 (285)
T cd05605         137 -------------DYGHIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSP  200 (285)
T ss_pred             -------------CCCCEEEeeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCC
Confidence                         467899999999987543222   2235789999999999988999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      |..........   ........           ....++...+..+.+|+.+||+.||.+||     ++.+++++
T Consensus       201 f~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         201 FRQRKEKVKRE---EVERRVKE-----------DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             CCCCchhhHHH---HHHHHhhh-----------cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            97643321110   00000000           01112223457789999999999999999     78888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.4e-42  Score=348.68  Aligned_cols=241  Identities=30%  Similarity=0.390  Sum_probs=190.5

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHH-HHhCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVN-FLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~-il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||+||+|++..         +|+.||||++.....   .....+..|.. +++.++||||+++++++...+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~   71 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKA---------DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKL   71 (323)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEE
Confidence            369999999999999875         678999999975422   12234555655 46789999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++|+|..++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~-----------------  130 (323)
T cd05575          72 YFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLD-----------------  130 (323)
T ss_pred             EEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEEC-----------------
Confidence            9999999999999988654 47899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       131 --------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~  200 (323)
T cd05575         131 --------SQGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD  200 (323)
T ss_pred             --------CCCcEEEeccCCCcccccCCC--ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence                    477899999999976433222  1234579999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      ..   .+   ........        ..+.    ...+..+.+||.+||+.||.+||++.+.+
T Consensus       201 ~~---~~---~~~i~~~~--------~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (323)
T cd05575         201 TA---EM---YDNILNKP--------LRLK----PNISVSARHLLEGLLQKDRTKRLGAKDDF  245 (323)
T ss_pred             HH---HH---HHHHHcCC--------CCCC----CCCCHHHHHHHHHHhhcCHHhCCCCCCCH
Confidence            21   11   11111100        0011    12256789999999999999999985333

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-43  Score=353.90  Aligned_cols=247  Identities=25%  Similarity=0.392  Sum_probs=207.5

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYE  215 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E  215 (511)
                      +||+|.||+||-|++..         |...+|||.+.........-+..|+.+.+.|+|.|||+++|.+.+++++-|.||
T Consensus       582 VLGKGTYG~VYA~RD~~---------tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME  652 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMD---------TQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME  652 (1226)
T ss_pred             EeecCceeEEEeecccc---------ceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence            69999999999999887         667899999987665555567899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhhCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          216 FMPRGSLENHLFRRSLPL--PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       216 ~~~~g~L~~~l~~~~~~l--~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      -++||+|..+|...-+++  .+...-.+..||++||.|||++.   |||||||-+|+|+..                   
T Consensus       653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNT-------------------  710 (1226)
T KOG4279|consen  653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNT-------------------  710 (1226)
T ss_pred             cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEee-------------------
Confidence            999999999998776777  77888899999999999999999   999999999999985                   


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC--CCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGRRSMDKNRP  371 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DIwSlGvil~elltg~~pf~~~~~  371 (511)
                           -.+.+||+|||.++.+..-..  ...++.||..|||||++..+  .|+.++|||||||++.||.||++||.....
T Consensus       711 -----ySGvlKISDFGTsKRLAginP--~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs  783 (1226)
T KOG4279|consen  711 -----YSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS  783 (1226)
T ss_pred             -----ccceEEecccccchhhccCCc--cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC
Confidence                 267899999999998654332  24458899999999999854  699999999999999999999999975432


Q ss_pred             CCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ....               +++.---...+.++.+.+.+++.+|.+|+.+||.+||++.++|+.
T Consensus       784 pqAA---------------MFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  784 PQAA---------------MFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             hhHh---------------hhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            2110               111111112445677788999999999999999999999999873

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-44  Score=356.06  Aligned_cols=246  Identities=29%  Similarity=0.422  Sum_probs=205.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH---HHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~---~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      -|..++.||.|+||.||-|++..         +...||||.+.....+..   .+++.|+.+|++|+|||+|.+.|||..
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~---------n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr   97 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVR---------NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR   97 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccC---------ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec
Confidence            35556779999999999999876         677999999987765544   457899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +...||||||| -|+-.++|.-...++.+-.+..|+.+.+.||+|||+++   .||||||..||||+             
T Consensus        98 e~TaWLVMEYC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLs-------------  160 (948)
T KOG0577|consen   98 EHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLS-------------  160 (948)
T ss_pred             cchHHHHHHHH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEec-------------
Confidence            99999999999 66888888766678989999999999999999999999   99999999999999             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                  +.+.|||+|||.|.....      .+.++|||.|||||++.   .+.|+-++||||||++..||...+
T Consensus       161 ------------e~g~VKLaDFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERk  222 (948)
T KOG0577|consen  161 ------------EPGLVKLADFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  222 (948)
T ss_pred             ------------CCCeeeeccccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcC
Confidence                        588899999999987654      34589999999999986   578999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|+...+...       +..++..      .-.|.+   ...+++..+..|+..||++-|.+|||..+++.+
T Consensus       223 PPlFnMNAMS-------ALYHIAQ------NesPtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  223 PPLFNMNAMS-------ALYHIAQ------NESPTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CCccCchHHH-------HHHHHHh------cCCCCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            9986543211       1111110      011122   245778999999999999999999999999864

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=6e-43  Score=369.52  Aligned_cols=255  Identities=25%  Similarity=0.325  Sum_probs=203.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||+||+|++..         +++.||||++......  ....+.+|+.+|..++|+||++++..+
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~---------~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~  100 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVS---------DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDF  100 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcC---------CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecce
Confidence            34689999999999999999998865         6789999999765432  234578899999999999999998877


Q ss_pred             EeCC--------eEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          205 IEDD--------QRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       205 ~~~~--------~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      ...+        .+++||||+++|+|.++|..+   ...+++..+..++.||+.||+|||+++   |+||||||+|||++
T Consensus       101 ~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~  177 (496)
T PTZ00283        101 AKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLC  177 (496)
T ss_pred             ecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEe
Confidence            5432        367999999999999998643   346889999999999999999999988   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                               .++.+||+|||+++..............+||+.|+|||++.+..++.++||||||
T Consensus       178 -------------------------~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlG  232 (496)
T PTZ00283        178 -------------------------SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLG  232 (496)
T ss_pred             -------------------------CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHH
Confidence                                     4778999999999875443222223446799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      |+||||++|+.||......   .+.   ......      .     ...++...+..+.+|+.+||+.||.+||++.+++
T Consensus       233 vilyeLltG~~Pf~~~~~~---~~~---~~~~~~------~-----~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell  295 (496)
T PTZ00283        233 VLLYELLTLKRPFDGENME---EVM---HKTLAG------R-----YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLL  295 (496)
T ss_pred             HHHHHHHHCCCCCCCCCHH---HHH---HHHhcC------C-----CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            9999999999999754211   111   111100      0     0111223357899999999999999999999998


Q ss_pred             HH
Q 010432          434 EA  435 (511)
Q Consensus       434 ~~  435 (511)
                      ++
T Consensus       296 ~~  297 (496)
T PTZ00283        296 NM  297 (496)
T ss_pred             hC
Confidence            75

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=9.3e-43  Score=349.40  Aligned_cols=237  Identities=29%  Similarity=0.406  Sum_probs=191.2

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|+++.         +++.||||++....   ......+..|..++..+ +||||+++++++...+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   71 (320)
T cd05590           1 RVLGKGSFGKVMLARLKE---------SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRL   71 (320)
T ss_pred             CeeeeCCCeEEEEEEEcC---------CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEE
Confidence            369999999999999875         57799999997542   12334577888888876 799999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |+|||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        72 ~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~-----------------  130 (320)
T cd05590          72 FFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLD-----------------  130 (320)
T ss_pred             EEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEEC-----------------
Confidence            9999999999999988654 46899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       131 --------~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  200 (320)
T cd05590         131 --------HEGHCKLADFGMCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN  200 (320)
T ss_pred             --------CCCcEEEeeCCCCeecCcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence                    477899999999876432221  1234679999999999998999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      ...   +....   ....            ..++...+..+.+|+.+||+.||.+||++
T Consensus       201 ~~~---~~~~i---~~~~------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         201 EDD---LFEAI---LNDE------------VVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHH---HHHHH---hcCC------------CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            211   11111   1000            01111235678999999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-43  Score=319.94  Aligned_cols=266  Identities=26%  Similarity=0.343  Sum_probs=210.9

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +..++|++.+.||+|||+-||+++...         ++..||+|++......+.+..++|++..++++||||++++++..
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s---------~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l   88 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLS---------TGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQL   88 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccC---------cccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence            456789999999999999999998654         78899999998877677788999999999999999999998775


Q ss_pred             eC-----CeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          206 ED-----DQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       206 ~~-----~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      .+     ...||+++|...|+|.+.+...   +..+++.+++.|+.+|++||++||+.. ++++||||||.|||+.    
T Consensus        89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls----  163 (302)
T KOG2345|consen   89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLS----  163 (302)
T ss_pred             HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEec----
Confidence            43     3489999999999999998643   457999999999999999999999987 6799999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce-------eeeeccccccccCCcccc---cCCCCccc
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-------VSTRVMGTYGYAAPEYVM---TGHLTSRS  347 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-------~~~~~~Gt~~y~aPE~~~---~~~~~~~~  347 (511)
                                           +.+.++|.|||.++...-.....       .......|..|+|||++.   +...+.++
T Consensus       164 ---------------------~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ert  222 (302)
T KOG2345|consen  164 ---------------------DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERT  222 (302)
T ss_pred             ---------------------CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccccc
Confidence                                 46789999999998653211100       011234689999999886   45678999


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |||||||+||+|+.|..||......+..              -...+..+.+.-.-....++.+.+|++.||+.||.+||
T Consensus       223 DIWSLGCtLYa~mf~~sPfe~~~~~GgS--------------laLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP  288 (302)
T KOG2345|consen  223 DIWSLGCTLYAMMFGESPFERIYQQGGS--------------LALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRP  288 (302)
T ss_pred             chhhhhHHHHHHHHcCCcchHHhhcCCe--------------EEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCC
Confidence            9999999999999999999743221110              00111221111111122578899999999999999999


Q ss_pred             CHHHHHHHhcCCC
Q 010432          428 LMSEVVEALKPLP  440 (511)
Q Consensus       428 s~~eil~~L~~l~  440 (511)
                      ++.+++..++.+.
T Consensus       289 ~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  289 TIPELLSKLDDLI  301 (302)
T ss_pred             CHHHHHHHHHhhc
Confidence            9999999887653

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-44  Score=355.60  Aligned_cols=264  Identities=26%  Similarity=0.417  Sum_probs=221.7

Q ss_pred             ChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcce
Q 010432          120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       120 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      .++.++.-..+..+.++||-|.||.||.|.|+.         -...||||.++.+... .++|+.|+.+|+.++|||+|+
T Consensus       258 n~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk---------yslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVq  327 (1157)
T KOG4278|consen  258 NADKWEMERTDITMKHKLGGGQYGEVYEGVWKK---------YSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQ  327 (1157)
T ss_pred             CcchhhccchheeeeeccCCCcccceeeeeeec---------cceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHH
Confidence            346777777788889999999999999999986         3568999999977543 578999999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      |+|+|..+..+|||+|||.+|+|.+||+..+ ..++.-..+.++.||..||+||..++   +|||||..+|+|+.     
T Consensus       328 LLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVg-----  399 (1157)
T KOG4278|consen  328 LLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVG-----  399 (1157)
T ss_pred             HhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhcccc-----
Confidence            9999999999999999999999999997644 34677777899999999999999988   99999999999999     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                          ++..|||+||||++.+..+..+ ......-.+.|.|||.+....++.|+|||+|||+|||
T Consensus       400 --------------------EnhiVKvADFGLsRlMtgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWE  458 (1157)
T KOG4278|consen  400 --------------------ENHIVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWE  458 (1157)
T ss_pred             --------------------ccceEEeeccchhhhhcCCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHH
Confidence                                5788999999999988664433 2222234678999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          359 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       359 llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      +.| |..||.+...                 .+.+.++...++-.-+..|++.+.+||+.||+++|.+||++.||-+.++
T Consensus       459 IATYGMsPYPGidl-----------------SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE  521 (1157)
T KOG4278|consen  459 IATYGMSPYPGIDL-----------------SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE  521 (1157)
T ss_pred             HHhcCCCCCCCccH-----------------HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence            998 6778765422                 1223344444444555667899999999999999999999999999887


Q ss_pred             CC
Q 010432          438 PL  439 (511)
Q Consensus       438 ~l  439 (511)
                      .+
T Consensus       522 tm  523 (1157)
T KOG4278|consen  522 TM  523 (1157)
T ss_pred             HH
Confidence            65

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.3e-42  Score=347.72  Aligned_cols=243  Identities=28%  Similarity=0.395  Sum_probs=193.5

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|+++.         +|..||||+++....   .....+..|..++..+ +||||+++++++...+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~   71 (316)
T cd05620           1 KVLGKGSFGKVLLAELKG---------KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHL   71 (316)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEE
Confidence            469999999999999875         678999999975421   2234567788888754 899999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||||||.+|+|..++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~-----------------  130 (316)
T cd05620          72 FFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLD-----------------  130 (316)
T ss_pred             EEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEC-----------------
Confidence            9999999999999988654 46889999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       131 --------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~  200 (316)
T cd05620         131 --------RDGHIKIADFGMCKENVFGDN--RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD  200 (316)
T ss_pred             --------CCCCEEeCccCCCeecccCCC--ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence                    467899999999875432221  1334679999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~-eil~~  435 (511)
                      ..   .+......           ..+.+    +...+.++.+|+.+||+.||.+||++. +++++
T Consensus       201 ~~---~~~~~~~~-----------~~~~~----~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         201 ED---ELFESIRV-----------DTPHY----PRWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             HH---HHHHHHHh-----------CCCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            21   11111110           01111    112346789999999999999999984 55543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.2e-42  Score=338.46  Aligned_cols=255  Identities=26%  Similarity=0.398  Sum_probs=206.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|.+.+.||+|+||.||+|.+..         ++..||+|++.... .....+.+|+++++.++|+||+++++++..++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~---------~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKK---------YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   75 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEec---------CCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC
Confidence            457888899999999999999865         57799999987543 23457889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++||||+++++|.+++... ...+++..++.++.|++.||+|||+++   |+||||||+|||++              
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~--------------  138 (263)
T cd05052          76 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVG--------------  138 (263)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEc--------------
Confidence            999999999999999998653 345899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 ++..+||+|||++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       139 -----------~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~  206 (263)
T cd05052         139 -----------ENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY  206 (263)
T ss_pred             -----------CCCcEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence                       4778999999999876543221 1112234678999999998999999999999999999998 89998


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ......   .......              .......+...+..+.+|+.+||+.||++||++.++++.|+.+
T Consensus       207 ~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         207 PGIDLS---QVYELLE--------------KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCHH---HHHHHHH--------------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            754221   1111110              0011112223357899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-43  Score=351.06  Aligned_cols=265  Identities=29%  Similarity=0.456  Sum_probs=219.6

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .......+.++||+|-||.|.+|....          +..||||+++...... ..+|.+|+++|.+|+|||||+|+|+|
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg----------~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC  604 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEG----------PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVC  604 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecC----------ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeee
Confidence            345667788999999999999998742          5799999999876544 47899999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCC-CHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPL-PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l-~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      ..++.+++||||+++|+|.+||.+...+. .-.....|+.||+.||+||.+.+   +|||||.+.|||++          
T Consensus       605 ~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~----------  671 (807)
T KOG1094|consen  605 VQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVD----------  671 (807)
T ss_pred             ecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeec----------
Confidence            99999999999999999999998764333 55566789999999999999998   99999999999999          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh--
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT--  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt--  361 (511)
                                     .++++||+|||+++.+..++.+....+.+-+++|||||.+..+++++++|||+||++|||+++  
T Consensus       672 ---------------~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C  736 (807)
T KOG1094|consen  672 ---------------GEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLC  736 (807)
T ss_pred             ---------------CcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHH
Confidence                           589999999999999988888888888888999999999999999999999999999999875  


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ...||......   +.++.....+......       .....+.-++..+.+||.+||..|-.+||++++|...|..
T Consensus       737 ~e~Py~~lt~e---~vven~~~~~~~~~~~-------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  737 REQPYSQLTDE---QVVENAGEFFRDQGRQ-------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             hhCchhhhhHH---HHHHhhhhhcCCCCcc-------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            67888654322   2222222222221111       1112234467889999999999999999999999988764

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.9e-42  Score=346.57  Aligned_cols=242  Identities=28%  Similarity=0.420  Sum_probs=193.2

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||+||+|++..         ++..||||+++....   .....+..|..++..+ +||||+++++++.+.+..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~   71 (316)
T cd05619           1 KMLGKGSFGKVFLAELKG---------TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENL   71 (316)
T ss_pred             CeeeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEE
Confidence            369999999999999875         677999999976421   2234566788888764 999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      +|||||+++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~-----------------  130 (316)
T cd05619          72 FFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLD-----------------  130 (316)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEEC-----------------
Confidence            9999999999999998653 46889999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       131 --------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~  200 (316)
T cd05619         131 --------TDGHIKIADFGMCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD  200 (316)
T ss_pred             --------CCCCEEEccCCcceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence                    467899999999975432221  1234579999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVE  434 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~-eil~  434 (511)
                      ..   .+......           ..+.    ++...+..+.+|+.+||+.||.+||++. ++++
T Consensus       201 ~~---~~~~~i~~-----------~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         201 EE---ELFQSIRM-----------DNPC----YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HH---HHHHHHHh-----------CCCC----CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            21   11111110           0011    1112346789999999999999999997 5654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.2e-42  Score=348.72  Aligned_cols=243  Identities=26%  Similarity=0.378  Sum_probs=194.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|++..         +++.||||+++....   .....+..|.+++..+ +||||+++++++..++..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~   71 (321)
T cd05591           1 KVLGKGSFGKVMLAELKG---------TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRL   71 (321)
T ss_pred             CccccCCCeEEEEEEECC---------CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeE
Confidence            369999999999999865         677999999976422   2234567899998866 899999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||||||++|+|..++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~-----------------  130 (321)
T cd05591          72 FFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLD-----------------  130 (321)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEEC-----------------
Confidence            9999999999999988644 46889999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       131 --------~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~  200 (321)
T cd05591         131 --------AEGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN  200 (321)
T ss_pred             --------CCCCEEEeecccceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence                    477899999999986433222  1234579999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-------LMSEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-------s~~eil~~  435 (511)
                      ...   .....   ....            ..++...+.++.+|+.+||+.||++||       ++.+++++
T Consensus       201 ~~~---~~~~i---~~~~------------~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         201 EDD---LFESI---LHDD------------VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHH---HHHHH---HcCC------------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            211   11111   1000            001112246789999999999999999       67777754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.3e-42  Score=348.89  Aligned_cols=242  Identities=25%  Similarity=0.333  Sum_probs=195.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      +|++.+.||+|+||.||+|++..         ++..||||++.....   .....+..|..++..+ +|++|+++++++.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~   71 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKG---------TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ   71 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe
Confidence            57889999999999999999865         677999999976432   1223467788888877 6899999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..+|||||+++|+|.+++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~------------  135 (323)
T cd05616          72 TMDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLD------------  135 (323)
T ss_pred             cCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEEC------------
Confidence            999999999999999999988654 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       136 -------------~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~P  200 (323)
T cd05616         136 -------------SEGHIKIADFGMCKENMWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP  200 (323)
T ss_pred             -------------CCCcEEEccCCCceecCCCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCC
Confidence                         477899999999975432221  12346799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      |......   .+.....   ..            ...++...+.++.+|+.+||+.||.+|+++
T Consensus       201 f~~~~~~---~~~~~i~---~~------------~~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         201 FEGEDED---ELFQSIM---EH------------NVAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCCHH---HHHHHHH---hC------------CCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            9754321   1111111   00            011122335778999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.6e-42  Score=349.06  Aligned_cols=250  Identities=24%  Similarity=0.373  Sum_probs=194.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||.||+|++..         +++.||+|+++....   .....+.+|+.++.++ +||||+++++++...+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~   71 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKK---------TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   71 (329)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEE
Confidence            369999999999999875         677999999986432   2234567899988877 899999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++|+|..++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~-----------------  130 (329)
T cd05618          72 FFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLD-----------------  130 (329)
T ss_pred             EEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEC-----------------
Confidence            9999999999999888544 47899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       131 --------~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  200 (329)
T cd05618         131 --------SEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  200 (329)
T ss_pred             --------CCCCEEEeeCCccccccCCCC--ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCC
Confidence                    477899999999975432221  1234679999999999999999999999999999999999999996422


Q ss_pred             CCCc--hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 010432          371 PNGE--HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  435 (511)
Q Consensus       371 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~------~eil~~  435 (511)
                      ....  .....+.....         ...  ...++...+..+.+||.+||+.||.+||++      .+++++
T Consensus       201 ~~~~~~~~~~~~~~~~i---------~~~--~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         201 SSDNPDQNTEDYLFQVI---------LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             CcCCcccccHHHHHHHH---------hcC--CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            1110  11111111100         000  011222335678899999999999999984      566543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.2e-42  Score=339.99  Aligned_cols=246  Identities=28%  Similarity=0.409  Sum_probs=195.1

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||+|+||+||+|.+..         +++.||||.+......   ..+.+..|+.+|+.++|+||+++++++..+...++|
T Consensus         1 lg~G~~g~Vy~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv   71 (280)
T cd05608           1 LGKGGFGEVSACQMRA---------TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLV   71 (280)
T ss_pred             CCCCCceeEEEEEEcc---------CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEE
Confidence            7999999999998875         6779999999754322   224567899999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          214 YEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||+++|+|.+++..   ....+++..++.++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~-----------------  131 (280)
T cd05608          72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLD-----------------  131 (280)
T ss_pred             EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC-----------------
Confidence            999999999988743   3346899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              +++.+||+|||++.........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       132 --------~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~  201 (280)
T cd05608         132 --------NDGNVRISDLGLAVELKDGQSK--TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG  201 (280)
T ss_pred             --------CCCCEEEeeCccceecCCCCcc--ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence                    4678999999999865443221  233578999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      ......  ....          .+...  ...++...+..+.+|+.+||+.||++||     ++.+++++
T Consensus       202 ~~~~~~--~~~~----------~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         202 EKVENK--ELKQ----------RILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             cchhHH--HHHH----------hhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            221110  0000          00000  0112223457789999999999999999     55666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.4e-42  Score=342.72  Aligned_cols=265  Identities=29%  Similarity=0.445  Sum_probs=209.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..+|.+.+.||+|+||.||++......    ...++..||+|.+..........+.+|+.+|++++|+||+++++++...
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~----~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLC----PEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG   79 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCC----CCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            357889999999999999999864311    1124567999999765544456789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      +..++||||+++++|.+++....            ..+++..++.++.||+.||+|||+++   |+||||||+|||++  
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~--  154 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVG--  154 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEc--
Confidence            99999999999999999986432            24899999999999999999999988   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                             +++.+||+|||+++...............++..|+|||++.+..++.++|||||||+
T Consensus       155 -----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i  211 (288)
T cd05093         155 -----------------------ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV  211 (288)
T ss_pred             -----------------------cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHH
Confidence                                   477899999999986644332222233456788999999998899999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          356 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       356 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      +|||++ |..||.......   .......   .  ..     ..    .+...+..+.+|+.+||+.||.+||++.+++.
T Consensus       212 l~~l~t~g~~p~~~~~~~~---~~~~i~~---~--~~-----~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         212 LWEIFTYGKQPWYQLSNNE---VIECITQ---G--RV-----LQ----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHH---HHHHHHc---C--Cc-----CC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            999998 899986543211   1111100   0  00     00    11123467899999999999999999999999


Q ss_pred             HhcCCCC
Q 010432          435 ALKPLPN  441 (511)
Q Consensus       435 ~L~~l~~  441 (511)
                      .|+.+..
T Consensus       275 ~l~~~~~  281 (288)
T cd05093         275 LLQNLAK  281 (288)
T ss_pred             HHHHHHH
Confidence            9887653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=5.5e-43  Score=357.91  Aligned_cols=257  Identities=23%  Similarity=0.281  Sum_probs=203.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      ...++|++.++||+|+||.||+|++..         ++..||||++.....   .....+.+|+.+++.++||||+++++
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~  110 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKS---------SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHY  110 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEE
Confidence            345789999999999999999999875         678999999975321   22245778999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++.+++..|||||||++|+|.+++...  .+++..+..++.||+.||+|||+++   |+||||||+|||++         
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~---------  176 (370)
T cd05596         111 AFQDDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLD---------  176 (370)
T ss_pred             EEecCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEc---------
Confidence            999999999999999999999988543  5788889999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC----CCCccccchhHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~----~~~~~~DIwSlGvil~e  358 (511)
                                      .++.+||+|||++......... .....+||+.|||||++.+.    .++.++|||||||+|||
T Consensus       177 ----------------~~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilye  239 (370)
T cd05596         177 ----------------KSGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE  239 (370)
T ss_pred             ----------------CCCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHH
Confidence                            4788999999999875432211 12345799999999998653    47899999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHh
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEAL  436 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~eil~~L  436 (511)
                      |++|+.||........   ...   .......   +   .+..  ....+..+.+||.+||+.+|.+  |+++.+++++-
T Consensus       240 lltG~~Pf~~~~~~~~---~~~---i~~~~~~---~---~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~  305 (370)
T cd05596         240 MLVGDTPFYADSLVGT---YSK---IMDHKNS---L---TFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP  305 (370)
T ss_pred             HHhCCCCcCCCCHHHH---HHH---HHcCCCc---C---CCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence            9999999976432111   000   0000000   0   0000  1123578899999999999988  99999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.1e-42  Score=339.91  Aligned_cols=261  Identities=27%  Similarity=0.405  Sum_probs=203.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|++.+.||+|+||.||+|.+..++..     ....|++|.+..... ....++..|+.++++++||||+++++++. .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDS-----IKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-G   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCc-----eeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-C
Confidence            4788899999999999999998653221     123588888864322 22346778888999999999999999875 4


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++++||+++|+|.+++......+++..++.++.||+.||.|||+++   ++||||||+|||++              
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~--------------  143 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLK--------------  143 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEc--------------
Confidence            5578999999999999999776667999999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 ++..+||+|||+++...............|+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       144 -----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~  212 (279)
T cd05111         144 -----------SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY  212 (279)
T ss_pred             -----------CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence                       477899999999987644332222334567889999999998899999999999999999998 99999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      .+......   .....    ....   ...       +..++..+.+++.+||..||.+||++.++++.|..+.
T Consensus       213 ~~~~~~~~---~~~~~----~~~~---~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         213 AGMRPHEV---PDLLE----KGER---LAQ-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CCCCHHHH---HHHHH----CCCc---CCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            75432211   11111    0000   000       1112356788999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2e-42  Score=342.22  Aligned_cols=264  Identities=28%  Similarity=0.425  Sum_probs=210.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|.+.+.||+|+||.||+|++.....    ..++..|++|.+........+.+.+|+.++++++|+||+++++++...+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSP----TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD   80 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCC----CCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence            468888999999999999998643211    1245679999997665544567889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          209 QRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      ..++||||+++++|.+++....               ..+++..++.++.||+.||+|||+++   |+||||||+|||++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~  157 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVG  157 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEc
Confidence            9999999999999999996432               34789999999999999999999998   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                               +++.+||+|||+++...............|+..|+|||++.+..++.++||||||
T Consensus       158 -------------------------~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (291)
T cd05094         158 -------------------------ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  212 (291)
T ss_pred             -------------------------cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH
Confidence                                     4778999999999876543332223345678899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          354 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       354 vil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |++|||++ |..||.......   .......    .          ........++..+.+|+.+||+.||.+||++.+|
T Consensus       213 ~il~el~t~g~~p~~~~~~~~---~~~~~~~----~----------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v  275 (291)
T cd05094         213 VILWEIFTYGKQPWFQLSNTE---VIECITQ----G----------RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEI  275 (291)
T ss_pred             HHHHHHHhCCCCCCCCCCHHH---HHHHHhC----C----------CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            99999999 999986543211   1111100    0          0001112235678999999999999999999999


Q ss_pred             HHHhcCCCC
Q 010432          433 VEALKPLPN  441 (511)
Q Consensus       433 l~~L~~l~~  441 (511)
                      ++.|+.+..
T Consensus       276 ~~~l~~~~~  284 (291)
T cd05094         276 YKILHALGK  284 (291)
T ss_pred             HHHHHHHHh
Confidence            999987744

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-42  Score=336.68  Aligned_cols=258  Identities=29%  Similarity=0.458  Sum_probs=202.6

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      |.+.+.||+|+||.||+|.+..+..      ++..||||+++.....  ....+.+|+.+++.++|+||+++++++....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   74 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDG------SQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS   74 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCC------CcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC
Confidence            5678899999999999998865321      4578999999865332  2356889999999999999999999887654


Q ss_pred             e------EEEEEEccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          209 Q------RLLVYEFMPRGSLENHLFRR-----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       209 ~------~~lv~E~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      .      .++||||+++|+|..++...     ...+++..+..++.|++.||.|||+++   |+||||||+|||++    
T Consensus        75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~----  147 (273)
T cd05035          75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLR----  147 (273)
T ss_pred             ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEEC----
Confidence            4      78999999999999988532     235889999999999999999999988   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|
T Consensus       148 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~  206 (273)
T cd05035         148 ---------------------EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW  206 (273)
T ss_pred             ---------------------CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHH
Confidence                                 46789999999998765433222222234577899999998889999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          358 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       358 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||++ |..||......   .........              .....+..++..+.+++.+||+.||.+||++.+|++.|
T Consensus       207 el~~~g~~p~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l  269 (273)
T cd05035         207 EIATRGQTPYPGVENH---EIYDYLRHG--------------NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL  269 (273)
T ss_pred             HHHhCCCCCCCCCCHH---HHHHHHHcC--------------CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            9999 88888654321   111111100              00111223457899999999999999999999999998


Q ss_pred             cCC
Q 010432          437 KPL  439 (511)
Q Consensus       437 ~~l  439 (511)
                      +.+
T Consensus       270 ~~~  272 (273)
T cd05035         270 ENI  272 (273)
T ss_pred             Hhh
Confidence            764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=3.5e-43  Score=341.80  Aligned_cols=254  Identities=34%  Similarity=0.560  Sum_probs=196.5

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      +.+.||.|.||.||+|.+...     ....+..|+||.++..... ..+.+.+|++++++++||||++++|++...+..+
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~-----~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~   77 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQK-----DNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLF   77 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEEST-----TTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEE
T ss_pred             EeeEEccCCCcEEEEEEEEcc-----cCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccc
Confidence            346799999999999999831     1125679999999664332 3567999999999999999999999999888899


Q ss_pred             EEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          212 LVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      +|||||++|+|.++|... ...+++..+..|+.||+.||.|||+++   |+|+||+++|||++                 
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~-----------------  137 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLD-----------------  137 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEE-----------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc-----------------
Confidence            999999999999999876 567999999999999999999999988   99999999999999                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKN  369 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~  369 (511)
                              .++.+||+|||++................+...|+|||.+....++.++||||||+++|||++ |+.||...
T Consensus       138 --------~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  138 --------SNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY  209 (259)
T ss_dssp             --------TTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred             --------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                    477899999999988744333322333457889999999998889999999999999999999 67888654


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..   ..+.....    ....          ...+..++..+.+||.+||+.||.+||++.+|++.|
T Consensus       210 ~~---~~~~~~~~----~~~~----------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  210 DN---EEIIEKLK----QGQR----------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             CH---HHHHHHHH----TTEE----------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cc---cccccccc----cccc----------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            21   11111111    1110          111122356789999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=9.5e-43  Score=355.91  Aligned_cols=258  Identities=22%  Similarity=0.283  Sum_probs=201.9

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceE
Q 010432          124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       124 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l  200 (511)
                      +....++|++.+.||+|+||.||+|++..         +++.||+|++.....   .....+.+|+.+++.++||||+++
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~  108 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKS---------SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL  108 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeE
Confidence            34456789999999999999999999876         677999999964321   223457789999999999999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ++++..++..|+|||||++|+|.+++...  .+++..+..++.||+.||+|||+++   |+||||||+|||++       
T Consensus       109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~-------  176 (370)
T cd05621         109 FCAFQDDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLD-------  176 (370)
T ss_pred             EEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEC-------
Confidence            99999999999999999999999998543  5788999999999999999999998   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC----CCCccccchhHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGVVL  356 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~----~~~~~~DIwSlGvil  356 (511)
                                        +++.+||+|||++......... .....+||+.|||||++.+.    .++.++|||||||+|
T Consensus       177 ------------------~~~~~kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~il  237 (370)
T cd05621         177 ------------------KHGHLKLADFGTCMKMDETGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL  237 (370)
T ss_pred             ------------------CCCCEEEEecccceecccCCce-ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHH
Confidence                              4778999999999876432221 12346799999999998754    378999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVE  434 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~eil~  434 (511)
                      |||++|+.||........   .   ........        .+........+..+.+|+.+||..++.+  |+++.++++
T Consensus       238 yell~G~~Pf~~~~~~~~---~---~~i~~~~~--------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         238 FEMLVGDTPFYADSLVGT---Y---SKIMDHKN--------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             HHHHhCCCCCCCCCHHHH---H---HHHHhCCc--------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence            999999999975432111   0   00000000        0000011123567889999999865544  889999988


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       304 h  304 (370)
T cd05621         304 H  304 (370)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.3e-42  Score=343.64  Aligned_cols=266  Identities=28%  Similarity=0.404  Sum_probs=209.0

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEee
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIG  202 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~  202 (511)
                      ....++|++.+.||+|+||.||++.+.....    ......||+|.+..... .....+.+|+.++.++ +|+||+++++
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   83 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDN----PNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG   83 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCC----CCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            3455678999999999999999998864221    12456899999976432 2234588999999999 8999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT  267 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp  267 (511)
                      ++..++..++||||+++|+|..++...               ...+++..++.++.||+.||.|||+++   |+||||||
T Consensus        84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp  160 (293)
T cd05053          84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAA  160 (293)
T ss_pred             EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccce
Confidence            999999999999999999999998632               245889999999999999999999988   99999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccc
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS  347 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~  347 (511)
                      +|||++                         +++.+||+|||+++...............++..|+|||++.+..++.++
T Consensus       161 ~Nil~~-------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  215 (293)
T cd05053         161 RNVLVT-------------------------EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQS  215 (293)
T ss_pred             eeEEEc-------------------------CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCccc
Confidence            999998                         4778999999999876543322222223456789999999888999999


Q ss_pred             cchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          348 DVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       348 DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      |||||||++|||++ |..||........   ....    ..          ......+...+..+.+|+.+||..||.+|
T Consensus       216 Di~slG~il~el~~~g~~p~~~~~~~~~---~~~~----~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~R  278 (293)
T cd05053         216 DVWSFGVLLWEIFTLGGSPYPGIPVEEL---FKLL----KE----------GYRMEKPQNCTQELYHLMRDCWHEVPSQR  278 (293)
T ss_pred             ceeehhhHHHHHhcCCCCCCCCCCHHHH---HHHH----Hc----------CCcCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            99999999999997 9999865432111   1100    00          00111122335678999999999999999


Q ss_pred             CCHHHHHHHhcCC
Q 010432          427 PLMSEVVEALKPL  439 (511)
Q Consensus       427 Ps~~eil~~L~~l  439 (511)
                      ||+.++++.|+.+
T Consensus       279 ps~~eil~~l~~~  291 (293)
T cd05053         279 PTFKQLVEDLDRM  291 (293)
T ss_pred             cCHHHHHHHHHHh
Confidence            9999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.3e-43  Score=348.90  Aligned_cols=255  Identities=24%  Similarity=0.313  Sum_probs=206.8

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCC-CCCCcceEee
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDL-VHLNLVKLIG  202 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l-~H~nIv~l~~  202 (511)
                      +....|+++++||+||.+.||++...+          ...||+|.+....  ......|.+|+..|.+| .|.+||+||+
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~----------~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~D  427 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSD----------KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYD  427 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCC----------CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEee
Confidence            345679999999999999999998653          3467887765432  23345689999999999 5999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      |-..++.+||||||= ..||..+|.+....++.-.++.|..|++.|+.++|.+|   |||.||||.|+|+-         
T Consensus       428 YEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV---------  494 (677)
T KOG0596|consen  428 YEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV---------  494 (677)
T ss_pred             eeccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE---------
Confidence            999999999999986 55999999877666664578899999999999999999   99999999999997         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-----------CCCccccchh
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-----------HLTSRSDVYS  351 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----------~~~~~~DIwS  351 (511)
                                       .+.+||+|||+|...............+||+.||+||.+...           ..+.++||||
T Consensus       495 -----------------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS  557 (677)
T KOG0596|consen  495 -----------------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS  557 (677)
T ss_pred             -----------------eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhh
Confidence                             788999999999988877666666678999999999998632           2567899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHH-HHHHHHHHHHhcccCCCCCCCHH
Q 010432          352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG-AQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ||||||+|+.|+.||.....               ...++..+.+|...-+|+..- ..++.++|+.||++||++||++.
T Consensus       558 LGCILYqMvYgktPf~~~~n---------------~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~  622 (677)
T KOG0596|consen  558 LGCILYQMVYGKTPFGQIIN---------------QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIP  622 (677)
T ss_pred             hhhHHHHHHhcCCchHHHHH---------------HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcH
Confidence            99999999999999963210               112334555654433333221 22399999999999999999999


Q ss_pred             HHHHH
Q 010432          431 EVVEA  435 (511)
Q Consensus       431 eil~~  435 (511)
                      ++|++
T Consensus       623 eLLqh  627 (677)
T KOG0596|consen  623 ELLQH  627 (677)
T ss_pred             HHhcC
Confidence            99985

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=3.4e-42  Score=346.42  Aligned_cols=244  Identities=26%  Similarity=0.355  Sum_probs=193.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|++..         +++.||||+++.....   ....+.+|+.++.++ +|+||+++++++...+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   71 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKK---------NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRL   71 (327)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEE
Confidence            369999999999999876         5779999999865322   234577899999888 699999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |||||||++|+|..++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~-----------------  130 (327)
T cd05617          72 FLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLD-----------------  130 (327)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEe-----------------
Confidence            9999999999999888543 46999999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||+||||++|+.||....
T Consensus       131 --------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~  200 (327)
T cd05617         131 --------ADGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIIT  200 (327)
T ss_pred             --------CCCCEEEeccccceeccCCCC--ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccC
Confidence                    477899999999985332221  1234679999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      .................         .  ...++...+..+.+|+.+||+.||.+|+++
T Consensus       201 ~~~~~~~~~~~~~~~~~---------~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         201 DNPDMNTEDYLFQVILE---------K--PIRIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCcccccHHHHHHHHHh---------C--CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            32221111111111100         0  001122234678899999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=3.5e-42  Score=337.88  Aligned_cols=264  Identities=27%  Similarity=0.403  Sum_probs=205.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|.+.+.||+|+||.||+|.+.....    ..++..||+|.+...... ....+.+|+.+++.++|+||+++++++.+
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~----~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   80 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDG----DAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE   80 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCC----CCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence            4678999999999999999998864110    114678999988754332 23468999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .+..++||||+++++|.+++....      ..+++..++.++.||+.||+|||+++   ++||||||+|||++..+    
T Consensus        81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~----  153 (277)
T cd05036          81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKG----  153 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccC----
Confidence            889999999999999999986542      25889999999999999999999998   99999999999998421    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        +...+||+|||+++...............++..|+|||++.+..++.++|||||||++|||+
T Consensus       154 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (277)
T cd05036         154 ------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF  215 (277)
T ss_pred             ------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence                              23468999999998764322211122233467899999999899999999999999999999


Q ss_pred             h-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          361 T-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       361 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      + |..||.......   +......              ......+...+..+.+|+.+||+.+|++||++.+|+++|.
T Consensus       216 ~~g~~pf~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         216 SLGYMPYPGRTNQE---VMEFVTG--------------GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             cCCCCCCCCCCHHH---HHHHHHc--------------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            7 999997543221   1111100              0011112223567899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=7.5e-42  Score=338.54  Aligned_cols=272  Identities=26%  Similarity=0.399  Sum_probs=209.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCC-------ccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcce
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAP-------VKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~-------~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      ..+|++.+.||+|+||.||+|.+...+...       .....+..||+|.+...... ....+.+|++++++++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            457999999999999999999886533211       12234567999999865432 3456889999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      +++++..++..++||||+++++|.+++....          ..+++..++.++.|++.||.|||+++   |+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence            9999999999999999999999999986543          26899999999999999999999988   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         ++..++|+|||+++...............+|+.|+|||++.+..++.++||
T Consensus       161 ili~-------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  215 (296)
T cd05051         161 CLVG-------------------------KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDV  215 (296)
T ss_pred             eeec-------------------------CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence            9998                         467899999999987654433333334567889999999988889999999


Q ss_pred             hhHHHHHHHHHh--CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          350 YSFGVVLLEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       350 wSlGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |||||++|||++  |..||......   .............       ........+...+.++.+|+.+||+.||.+||
T Consensus       216 ~slG~~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  285 (296)
T cd05051         216 WAFGVTLWEILTLCREQPYEHLTDQ---QVIENAGHFFRDD-------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRP  285 (296)
T ss_pred             hhhHHHHHHHHhcCCCCCCCCcChH---HHHHHHHhccccc-------cccccCCCccCCCHHHHHHHHHHhccChhcCC
Confidence            999999999998  66777543211   1111111110000       00000111122346899999999999999999


Q ss_pred             CHHHHHHHhc
Q 010432          428 LMSEVVEALK  437 (511)
Q Consensus       428 s~~eil~~L~  437 (511)
                      ++.+|++.|+
T Consensus       286 t~~el~~~L~  295 (296)
T cd05051         286 TFREIHLFLQ  295 (296)
T ss_pred             CHHHHHHHhc
Confidence            9999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.2e-42  Score=340.26  Aligned_cols=260  Identities=25%  Similarity=0.361  Sum_probs=204.4

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +|++.+.||+|+||.||+|.+.....    ...+..||||+++...... ...+.+|+.++..++||||+++++++...+
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~----~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~   81 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAP----GEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ   81 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCC----CCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence            46777889999999999998754211    1145789999998654322 346889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          209 QRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      ..++++||+.+++|.+++...               ...+++..++.++.|++.||.|||+++   |+||||||+|||++
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~  158 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVF  158 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEec
Confidence            999999999999999998522               134788889999999999999999988   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                               ++..+||+|||+++...............+++.|+|||++.+..++.++||||||
T Consensus       159 -------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  213 (283)
T cd05091         159 -------------------------DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYG  213 (283)
T ss_pred             -------------------------CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHH
Confidence                                     4677999999999876544333223334567899999999888899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          354 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       354 vil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |++|||++ |..||.+....   ........             . .....+..++..+.+|+.+||+.+|.+||++.+|
T Consensus       214 ~~l~el~~~g~~p~~~~~~~---~~~~~i~~-------------~-~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i  276 (283)
T cd05091         214 VVLWEVFSYGLQPYCGYSNQ---DVIEMIRN-------------R-QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI  276 (283)
T ss_pred             HHHHHHHcCCCCCCCCCCHH---HHHHHHHc-------------C-CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence            99999998 88888654321   11111110             0 0011122345778999999999999999999999


Q ss_pred             HHHhcC
Q 010432          433 VEALKP  438 (511)
Q Consensus       433 l~~L~~  438 (511)
                      +..|+.
T Consensus       277 ~~~l~~  282 (283)
T cd05091         277 HSRLRT  282 (283)
T ss_pred             HHHhhC
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.6e-42  Score=356.70  Aligned_cols=265  Identities=24%  Similarity=0.379  Sum_probs=205.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCC-CCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLV-HLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~-H~nIv~l~~~~  204 (511)
                      ..++|.+.++||+|+||.||+|++....    ...++..||||+++...... ...+++|+.+|.++. |||||++++++
T Consensus        35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~----~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~  110 (401)
T cd05107          35 PRDNLVLGRTLGSGAFGRVVEATAHGLS----HSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC  110 (401)
T ss_pred             cHHHeehhhhccCCCceeEEEEEEcCCC----CCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence            3456888899999999999999975321    11246689999998653322 346889999999997 99999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC------------------------------------------------------
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS------------------------------------------------------  230 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~------------------------------------------------------  230 (511)
                      ...+..++|||||++|+|.+++.+..                                                      
T Consensus       111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (401)
T cd05107         111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV  190 (401)
T ss_pred             ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence            99999999999999999999986431                                                      


Q ss_pred             -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC
Q 010432          231 -------------------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT  267 (511)
Q Consensus       231 -------------------------------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp  267 (511)
                                                                 ..+++..++.|+.||+.||.|||+.+   |+||||||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp  267 (401)
T cd05107         191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA  267 (401)
T ss_pred             chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence                                                       13566778889999999999999988   99999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccc
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS  347 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~  347 (511)
                      +|||++                         ++..+||+|||+++...............|++.|||||++.+..++.++
T Consensus       268 ~NiLl~-------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  322 (401)
T cd05107         268 RNVLIC-------------------------EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLS  322 (401)
T ss_pred             ceEEEe-------------------------CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHh
Confidence            999998                         4677999999999865432221122234578899999999988899999


Q ss_pred             cchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          348 DVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       348 DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      |||||||++|||++ |..||........  ......    .          ......+...+..+.+|+.+||..+|.+|
T Consensus       323 DvwslGvil~e~l~~g~~P~~~~~~~~~--~~~~~~----~----------~~~~~~p~~~~~~l~~li~~cl~~~P~~R  386 (401)
T cd05107         323 DVWSFGILLWEIFTLGGTPYPELPMNEQ--FYNAIK----R----------GYRMAKPAHASDEIYEIMQKCWEEKFEIR  386 (401)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCchHH--HHHHHH----c----------CCCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence            99999999999998 8889865322110  000000    0          00111122235789999999999999999


Q ss_pred             CCHHHHHHHhcCC
Q 010432          427 PLMSEVVEALKPL  439 (511)
Q Consensus       427 Ps~~eil~~L~~l  439 (511)
                      |++.+|++.|+.+
T Consensus       387 Ps~~ell~~L~~~  399 (401)
T cd05107         387 PDFSQLVHLVGDL  399 (401)
T ss_pred             cCHHHHHHHHHHH
Confidence            9999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.7e-42  Score=348.33  Aligned_cols=262  Identities=23%  Similarity=0.287  Sum_probs=196.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ...+|++++.||+|+||.||+|++..         ++..||+|+....      ....|+.+|++++|+|||++++++..
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~  128 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPG---------QPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVS  128 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECC---------CCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEe
Confidence            34579999999999999999999865         5678999985433      23579999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....++||||+ .++|.+++......+++..++.|+.||+.||.|||+++   ||||||||+|||++             
T Consensus       129 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~-------------  191 (357)
T PHA03209        129 GAITCMVLPHY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFIN-------------  191 (357)
T ss_pred             CCeeEEEEEcc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC-------------
Confidence            99999999999 56999998776678999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .+..+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|||+++..++
T Consensus       192 ------------~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        192 ------------DVDQVCIGDLGAAQFPVVAPA---FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ------------CCCCEEEecCccccccccCcc---cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence                        467899999999975432211   23357999999999999999999999999999999999976655


Q ss_pred             CCCCCCCchh--------HHHhhhhhhccccccc---------cccC--CccCCCC-------CHHHHHHHHHHHHHhcc
Q 010432          367 DKNRPNGEHN--------LVEWARPHLGERRRFY---------RLID--PRLEGHF-------SIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       367 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~-------~~~~~~~~~~Li~~cl~  420 (511)
                      ....+.....        +.............+.         ..++  ......+       ....+..+.+||.+||+
T Consensus       257 f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~  336 (357)
T PHA03209        257 FEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLT  336 (357)
T ss_pred             ccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHc
Confidence            4332221110        0000000000000000         0000  0000000       01123456789999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 010432          421 RDPKARPLMSEVVEA  435 (511)
Q Consensus       421 ~dP~~RPs~~eil~~  435 (511)
                      .||.+|||+.||+++
T Consensus       337 ~dP~~Rpta~e~l~h  351 (357)
T PHA03209        337 FDAAMRPSAEEILNY  351 (357)
T ss_pred             CCcccCcCHHHHhcC
Confidence            999999999999975

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.9e-42  Score=345.68  Aligned_cols=249  Identities=27%  Similarity=0.325  Sum_probs=193.9

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHH-HHhCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVN-FLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~-il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||+||+|++..         +++.||+|++.....   .....+..|.. +++.++|+||+++++++...+..
T Consensus         1 ~~lg~G~fg~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~   71 (325)
T cd05602           1 KVIGKGSFGKVLLARHKA---------EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL   71 (325)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeE
Confidence            369999999999999875         577999999975421   12234445544 56789999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++|+|.+++... ..+.+..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~-----------------  130 (325)
T cd05602          72 YFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLD-----------------  130 (325)
T ss_pred             EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEC-----------------
Confidence            9999999999999998654 46788888899999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|||||++.+..++.++|||||||++|||++|..||....
T Consensus       131 --------~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  200 (325)
T cd05602         131 --------SQGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN  200 (325)
T ss_pred             --------CCCCEEEccCCCCcccccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC
Confidence                    477899999999986433221  1234679999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      ...   .....   ....            ..+....+..+.+|+.+||+.||.+||++.+.+..+.....
T Consensus       201 ~~~---~~~~i---~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~  253 (325)
T cd05602         201 TAE---MYDNI---LNKP------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIF  253 (325)
T ss_pred             HHH---HHHHH---HhCC------------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcc
Confidence            211   11111   0000            01111235678999999999999999998865554444433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.9e-42  Score=336.35  Aligned_cols=256  Identities=30%  Similarity=0.465  Sum_probs=209.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ...+|++.++||.|+||.||+|.+..          +..||+|++..........+.+|+.+++.++|+||+++++++..
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~----------~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   73 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN----------RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV   73 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC----------CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec
Confidence            34578899999999999999998864          56899999987665455678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+..++||||+++|+|.+++... ...+++..++.++.||+.||.|||+++   |+|+||||+|||++            
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~------------  138 (261)
T cd05148          74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVG------------  138 (261)
T ss_pred             CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEc------------
Confidence            99999999999999999999753 346899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   ++..+||+|||++.........  .....++..|+|||++....++.++|||||||++|+|++ |+.
T Consensus       139 -------------~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~  203 (261)
T cd05148         139 -------------EDLVCKVADFGLARLIKEDVYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV  203 (261)
T ss_pred             -------------CCceEEEccccchhhcCCcccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence                         4778999999999876443221  123346788999999988899999999999999999998 899


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||......   ........              ......+...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       204 p~~~~~~~---~~~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         204 PYPGMNNH---EVYDQITA--------------GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CCCcCCHH---HHHHHHHh--------------CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            99654321   11111110              011112223457789999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=5.6e-42  Score=337.07  Aligned_cols=261  Identities=28%  Similarity=0.431  Sum_probs=206.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|...++||+|+||.||++.....    ....++..||+|.+..........+.+|+++++.++|+||+++++++...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNL----LPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG   79 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecC----CCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence            35788889999999999999976431    11235678999998766544456789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS--------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      +..++||||+++|+|.+++....              ..+++..++.++.||+.||+|||+++   |+||||||+|||++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~  156 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVG  156 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEc
Confidence            99999999999999999986532              24788999999999999999999988   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                               ++..+||+|||+++...............+++.|+|||++.+..++.++||||||
T Consensus       157 -------------------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  211 (280)
T cd05092         157 -------------------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG  211 (280)
T ss_pred             -------------------------CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHH
Confidence                                     4778999999999865443322222234467889999999989999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          354 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       354 vil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |++|||++ |..||.......   ......    ...          ....+...+..+.+|+.+||+.||.+||++.+|
T Consensus       212 ~il~el~~~g~~p~~~~~~~~---~~~~~~----~~~----------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l  274 (280)
T cd05092         212 VVLWEIFTYGKQPWYQLSNTE---AIECIT----QGR----------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDI  274 (280)
T ss_pred             HHHHHHHcCCCCCCccCCHHH---HHHHHH----cCc----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            99999998 899986433211   111000    000          001111235678999999999999999999999


Q ss_pred             HHHhc
Q 010432          433 VEALK  437 (511)
Q Consensus       433 l~~L~  437 (511)
                      ++.|+
T Consensus       275 ~~~l~  279 (280)
T cd05092         275 HSRLQ  279 (280)
T ss_pred             HHHHh
Confidence            99885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=4.4e-42  Score=333.31  Aligned_cols=252  Identities=24%  Similarity=0.392  Sum_probs=202.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++.+.||+|+||.||+|.+..          +..||||.+..... ....+.+|+.++++++||||+++++++...+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~----------~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG----------QYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR   72 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC----------CCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            467888999999999999998753          34699999875543 3467899999999999999999999999888


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+.+|+|.+++......+++..++.++.||+.||.|||+.+   |+|+||||+|||++               
T Consensus        73 ~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~---------------  134 (256)
T cd05113          73 PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVD---------------  134 (256)
T ss_pred             CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEc---------------
Confidence            899999999999999999765557899999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                +++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       135 ----------~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~  203 (256)
T cd05113         135 ----------DQGCVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYE  203 (256)
T ss_pred             ----------CCCCEEECCCccceecCCCcee-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcC
Confidence                      4778999999999865443221 1122346678999999988889999999999999999998 999986


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ......   .......    ..          ....+...+..+.+++.+||+.||.+||++.+|+..|+
T Consensus       204 ~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         204 RFNNSE---TVEKVSQ----GL----------RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             cCCHHH---HHHHHhc----CC----------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            543211   1111110    00          00011112578899999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=4.9e-42  Score=344.36  Aligned_cols=238  Identities=28%  Similarity=0.362  Sum_probs=188.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHH-HHhCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVN-FLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~-il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      ++||+|+||.||+|++..         ++..||||++.....   .....+.+|.. +++.++||||+++++++...+..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~   71 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKS---------DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKL   71 (321)
T ss_pred             CeeeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEE
Confidence            369999999999999875         577999999975422   12234555654 57889999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |+|||||++|+|..++... ..+++..+..++.||+.||.|||+++   |+||||||+||||+                 
T Consensus        72 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~-----------------  130 (321)
T cd05603          72 YFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLD-----------------  130 (321)
T ss_pred             EEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEEC-----------------
Confidence            9999999999999888543 46888889999999999999999988   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       131 --------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  200 (321)
T cd05603         131 --------SQGHVVLTDFGLCKEGVEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD  200 (321)
T ss_pred             --------CCCCEEEccCCCCccCCCCCC--ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC
Confidence                    477899999999986433221  1234679999999999998899999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ..   .+...   ....            ...++...+..+.+++.+||+.||.+||++.
T Consensus       201 ~~---~~~~~---i~~~------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         201 VS---QMYDN---ILHK------------PLQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HH---HHHHH---HhcC------------CCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            11   11111   1100            0011122346789999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.9e-42  Score=345.58  Aligned_cols=243  Identities=28%  Similarity=0.407  Sum_probs=195.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||+||+|++..         ++..||||+++....   .....+.+|..++..+ +||||+++++++...+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~   71 (318)
T cd05570           1 KVLGKGSFGKVLLAELKG---------TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRL   71 (318)
T ss_pred             CeeeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEE
Confidence            369999999999999865         577999999975421   2234567899999888 799999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |+||||+++|+|..++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~-----------------  130 (318)
T cd05570          72 FFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLD-----------------  130 (318)
T ss_pred             EEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEEC-----------------
Confidence            9999999999999988654 47899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              +++.+||+|||+++........  ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       131 --------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~  200 (318)
T cd05570         131 --------SEGHIKIADFGMCKEGILGGVT--TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD  200 (318)
T ss_pred             --------CCCcEEecccCCCeecCcCCCc--ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence                    4778999999999753222211  233579999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~-----~eil~~  435 (511)
                      ..   ......   ...        .    ..++...+..+.+||.+||+.||.+||++     .+++++
T Consensus       201 ~~---~~~~~i---~~~--------~----~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         201 ED---ELFQSI---LED--------E----VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             HH---HHHHHH---HcC--------C----CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            21   111110   000        0    01112235678999999999999999999     777764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.4e-42  Score=346.16  Aligned_cols=251  Identities=28%  Similarity=0.353  Sum_probs=196.1

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHH-HHhCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVN-FLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~-il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||+||+|++..         +|+.||||++.....   .....+..|.. +++.++||||+++++++..++..
T Consensus         1 ~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~   71 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKL---------DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKL   71 (325)
T ss_pred             CceeeCCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEE
Confidence            369999999999999865         678999999975421   22234556655 46789999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++|+|..++.. ...+++..+..++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~-----------------  130 (325)
T cd05604          72 YFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLD-----------------  130 (325)
T ss_pred             EEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEEC-----------------
Confidence            999999999999988854 347899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              +++.+||+|||+++.......  .....+||+.|||||++.+..++.++|||||||++|||++|..||....
T Consensus       131 --------~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~  200 (325)
T cd05604         131 --------SQGHVVLTDFGLCKEGIAQSD--TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD  200 (325)
T ss_pred             --------CCCCEEEeecCCcccCCCCCC--CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence                    477899999999976432221  1234679999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCCCC
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLK  443 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~~  443 (511)
                      ...   +.   .......        ..+.    ...+..+.+++.+||+.||.+||++.+.++.+...+.+.
T Consensus       201 ~~~---~~---~~~~~~~--------~~~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~  255 (325)
T cd05604         201 VAE---MY---DNILHKP--------LVLR----PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFE  255 (325)
T ss_pred             HHH---HH---HHHHcCC--------ccCC----CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcC
Confidence            211   11   1111000        0011    122467889999999999999999876555555554443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=3.9e-42  Score=343.11  Aligned_cols=267  Identities=24%  Similarity=0.333  Sum_probs=202.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|.+.+.||+|+||.||+|++..         ++..||||.++..... ....+.+|+.++++++|+||+++++++..+
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   76 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKL---------TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD   76 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecC---------CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence            568999999999999999998865         5779999999754322 234678899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+. ++|.+++......+++..+..++.||+.||+|||+++   |+||||||+|||++              
T Consensus        77 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~--------------  138 (309)
T cd07872          77 KSLTLVFEYLD-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLIN--------------  138 (309)
T ss_pred             CeEEEEEeCCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC--------------
Confidence            99999999996 5898888766666899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+++........  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus       139 -----------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf  205 (309)
T cd07872         139 -----------ERGELKLADFGLARAKSVPTKT--YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLF  205 (309)
T ss_pred             -----------CCCCEEECccccceecCCCccc--cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                       4778999999999764432221  223468999999998865 56899999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhh--------hhccccccccccCCccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARP--------HLGERRRFYRLIDPRLEG----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ...........+.....        .......+.....+....    ......+.++.+||.+||+.||.+|||+.|+++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         206 PGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            76543222111111000        000000000000000000    001123567889999999999999999999987


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       286 h  286 (309)
T cd07872         286 H  286 (309)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.1e-42  Score=333.56  Aligned_cols=256  Identities=26%  Similarity=0.395  Sum_probs=204.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|.+..          +..||||.++.... ..+++.+|+.++++++|+||+++++++..
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~----------~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNN----------TTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTL   72 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecC----------CeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEec
Confidence            34678999999999999999998643          45799999976543 34678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++            
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~------------  137 (261)
T cd05068          73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVG------------  137 (261)
T ss_pred             CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEc------------
Confidence            999999999999999999996543 46899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   +++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.
T Consensus       138 -------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~  203 (261)
T cd05068         138 -------------ENNICKVADFGLARVIKEDIYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRM  203 (261)
T ss_pred             -------------CCCCEEECCcceEEEccCCccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence                         4778999999999876532211 1111223467999999998899999999999999999999 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||......   .+.....    ..          .....+...+..+.+|+.+||+.+|.+||++.+|++.|+.+
T Consensus       204 p~~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         204 PYPGMTNA---EVLQQVD----QG----------YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CCCCCCHH---HHHHHHH----cC----------CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            99754321   1111100    00          00011122357789999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.9e-42  Score=359.34  Aligned_cols=264  Identities=24%  Similarity=0.275  Sum_probs=200.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ...|.+.+.||+|+||.||+|.+..         +++.||||....      ..+.+|+++|++|+|+|||++++++..+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~---------~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~  232 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPD---------YPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVG  232 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECC---------CCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEEC
Confidence            4579999999999999999999875         577999996432      2457899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..+||||++ .++|..++......+++..++.|+.||+.||.|||+++   ||||||||+||||+              
T Consensus       233 ~~~~lv~e~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~--------------  294 (461)
T PHA03211        233 GLTCLVLPKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVN--------------  294 (461)
T ss_pred             CEEEEEEEcc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEEC--------------
Confidence            9999999999 57999998766667999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||+++...............||+.|||||++.+..++.++|||||||+||||++|..++.
T Consensus       295 -----------~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf  363 (461)
T PHA03211        295 -----------GPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF  363 (461)
T ss_pred             -----------CCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence                       467799999999986544322222334679999999999999999999999999999999999887654


Q ss_pred             CCCCCC-----chhHHHhhhh---hhccccc-----cc--------cccCCccCCC-CC--HHHHHHHHHHHHHhcccCC
Q 010432          368 KNRPNG-----EHNLVEWARP---HLGERRR-----FY--------RLIDPRLEGH-FS--IKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       368 ~~~~~~-----~~~~~~~~~~---~~~~~~~-----~~--------~~~~~~~~~~-~~--~~~~~~~~~Li~~cl~~dP  423 (511)
                      ......     ...+...+..   ...+...     +.        ....+..... +.  ......+.+||.+||+.||
T Consensus       364 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP  443 (461)
T PHA03211        364 SASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDG  443 (461)
T ss_pred             cCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccCh
Confidence            322110     1111111110   0000000     00        0000000000 00  0123468899999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      .+|||+.|||++
T Consensus       444 ~~RPsa~elL~h  455 (461)
T PHA03211        444 ARRPSAAELLRL  455 (461)
T ss_pred             hhCcCHHHHhhC
Confidence            999999999985

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=8.8e-42  Score=332.81  Aligned_cols=258  Identities=23%  Similarity=0.335  Sum_probs=206.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|++..         ++..||||.+.....   .....+.+|+.+++.++||||+++++++.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLL---------DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI   72 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeC---------CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE
Confidence            578999999999999999999865         577999998865332   22346789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ..+..++||||+++|+|.+++..   ....+++..++.++.||+.||.|||+++   |+|+||||+|||++         
T Consensus        73 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~---------  140 (267)
T cd08228          73 EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFIT---------  140 (267)
T ss_pred             ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEc---------
Confidence            99999999999999999988853   2345788999999999999999999988   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.++|+|||++.........  .....|++.|+|||++.+..++.++||||||+++|||++|
T Consensus       141 ----------------~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g  202 (267)
T cd08228         141 ----------------ATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL  202 (267)
T ss_pred             ----------------CCCCEEECccccceeccchhHH--HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcC
Confidence                            4677999999999875442211  1234688999999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      +.||....... ........          ..   ..........+..+.+|+.+||+.+|++||++.+|++.|+.+
T Consensus       203 ~~p~~~~~~~~-~~~~~~~~----------~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         203 QSPFYGDKMNL-FSLCQKIE----------QC---DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCCCccccccH-HHHHHHHh----------cC---CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            99996532211 11111110          00   001111223457789999999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.6e-42  Score=339.15  Aligned_cols=272  Identities=27%  Similarity=0.432  Sum_probs=204.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCC-----CccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTA-----PVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~-----~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|++...+..     ....+....||||.++..... ....|.+|+++|++++|+||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            35799999999999999999987542110     011123446999999765322 234688999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC-----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS-----------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                      +++...+..++||||+++++|.+++....           ..+++..++.++.|++.||+|||+++   |+||||||+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence            99999999999999999999999985432           23678889999999999999999998   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccch
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  350 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIw  350 (511)
                      |++                         ++..+||+|||++................++..|+|||++.+..++.++|||
T Consensus       161 ll~-------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  215 (295)
T cd05097         161 LVG-------------------------NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVW  215 (295)
T ss_pred             EEc-------------------------CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHH
Confidence            998                         4677999999999875443322222334567899999999988999999999


Q ss_pred             hHHHHHHHHHh--CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          351 SFGVVLLEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       351 SlGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      ||||++|||++  |..||......   ................       .....+...+..+.+|+.+||+.||++||+
T Consensus       216 SlG~~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~RPs  285 (295)
T cd05097         216 AFGVTLWEMFTLCKEQPYSLLSDE---QVIENTGEFFRNQGRQ-------IYLSQTPLCPSPVFKLMMRCWSRDIKDRPT  285 (295)
T ss_pred             HHHHHHHHHHHcCCCCCCcccChH---HHHHHHHHhhhhcccc-------ccCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            99999999998  56677643321   1111111111100000       000011123468999999999999999999


Q ss_pred             HHHHHHHhc
Q 010432          429 MSEVVEALK  437 (511)
Q Consensus       429 ~~eil~~L~  437 (511)
                      +.+|++.|+
T Consensus       286 ~~~i~~~l~  294 (295)
T cd05097         286 FNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHh
Confidence            999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=5.1e-42  Score=341.25  Aligned_cols=265  Identities=25%  Similarity=0.371  Sum_probs=208.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|.+.+.||+|+||.||+|.+...    ....++..||||.++.... ...+.+.+|+.+++++ +|+||+++++++
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  108 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGL----SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC  108 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecC----CCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            345789999999999999999986321    1122567899999876532 2235688999999999 799999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      ...+..++||||+++|+|.+++.... ..+++..++.++.||+.||.|||+++   |+|+||||+|||++          
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~----------  175 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLT----------  175 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEc----------
Confidence            99999999999999999999996543 34899999999999999999999988   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-C
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g  362 (511)
                                     ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |
T Consensus       176 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g  240 (302)
T cd05055         176 ---------------HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG  240 (302)
T ss_pred             ---------------CCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCC
Confidence                           467799999999987654332222223456788999999998899999999999999999998 9


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ..||.......  .......              .......+...+..+.+|+.+||+.+|++||++.+|++.|+.+
T Consensus       241 ~~p~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         241 SNPYPGMPVDS--KFYKLIK--------------EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCcCCCCchH--HHHHHHH--------------cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            99987543211  1111110              0000011112246789999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=3.7e-42  Score=334.43  Aligned_cols=255  Identities=24%  Similarity=0.397  Sum_probs=204.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.++||+|+||.||+|.+..          +..||+|.+..... ..+.+.+|+.+++.++|+||+++++++...
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~----------~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   73 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNN----------STKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKE   73 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecC----------CceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            4678999999999999999998643          45799999875432 346788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+   ++||||||+|||++             
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~-------------  137 (261)
T cd05072          74 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVS-------------  137 (261)
T ss_pred             CCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEec-------------
Confidence            9999999999999999998653 456888999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  +++.+||+|||++......... ......++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       138 ------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p  204 (261)
T cd05072         138 ------------ESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP  204 (261)
T ss_pred             ------------CCCcEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCC
Confidence                        4778999999999876543221 1222346778999999988889999999999999999998 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |......   ........    ..      ..    ......+..+.+|+.+||..+|++||++.++++.|+.+
T Consensus       205 ~~~~~~~---~~~~~~~~----~~------~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         205 YPGMSNS---DVMSALQR----GY------RM----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCCCCHH---HHHHHHHc----CC------CC----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            9653221   11111110    00      00    01112346789999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4.6e-42  Score=337.36  Aligned_cols=262  Identities=23%  Similarity=0.372  Sum_probs=204.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|++.++||+|+||+||+|++..++..     ....||+|+++..... ....+.+|+.++..+.|+||+++++++..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-----~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGEN-----VKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCc-----cceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence            45788999999999999999987653221     1235899999765332 24568899999999999999999999875


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       ...+++|||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~-------------  143 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVK-------------  143 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc-------------
Confidence             4578999999999999999766667899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       144 ------------~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  211 (279)
T cd05109         144 ------------SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ------------CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                        467799999999987654322211222345678999999998899999999999999999998 8899


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |......   .+..+...    ..          ....+...+..+.+++.+||+.||++||++.++++.|+.+.
T Consensus       212 ~~~~~~~---~~~~~~~~----~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         212 YDGIPAR---EIPDLLEK----GE----------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             CCCCCHH---HHHHHHHC----CC----------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            8653221   11111110    00          00111223567899999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.1e-41  Score=332.30  Aligned_cols=256  Identities=23%  Similarity=0.329  Sum_probs=203.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..+|++.+.||+|+||.||+|++..         ++..||+|++..........+.+|+.++++++|+||+++++++..+
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~---------~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~   78 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLH---------TGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR   78 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECC---------CCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence            3579999999999999999999865         5779999999765444445678899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++              
T Consensus        79 ~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~--------------  140 (267)
T cd06646          79 EKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLT--------------  140 (267)
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEC--------------
Confidence            9999999999999999988644 46899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                 .++.+||+|||++........  ......|+..|+|||.+.   ...++.++|||||||++|||++|+.
T Consensus       141 -----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~  207 (267)
T cd06646         141 -----------DNGDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQP  207 (267)
T ss_pred             -----------CCCCEEECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCC
Confidence                       467799999999986543221  112346889999999874   4457889999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||....+.....  .+      ...   ....+...  .....+..+.+||.+||+.||++||++++|+++|
T Consensus       208 p~~~~~~~~~~~--~~------~~~---~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         208 PMFDLHPMRALF--LM------SKS---NFQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             Cccccchhhhhe--ee------ecC---CCCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            986433211100  00      000   00001111  1112357889999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=6.3e-42  Score=338.37  Aligned_cols=261  Identities=28%  Similarity=0.404  Sum_probs=204.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +|++.+.||+|+||.||+|.......    ......||+|.+...... ....+.+|+.+++.++||||+++++++...+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   76 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKG----RAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG   76 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCC----CCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC
Confidence            47888999999999999998753211    113457999988755432 2356889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC-----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc
Q 010432          209 QRLLVYEFMPRGSLENHLFRR-----------------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF  265 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~-----------------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL  265 (511)
                      ..++||||+.+|+|.+++...                       ...+++..++.++.|++.||.|||+++   |+||||
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~di  153 (290)
T cd05045          77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDL  153 (290)
T ss_pred             CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhh
Confidence            999999999999999988532                       124788899999999999999999988   999999


Q ss_pred             CCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCc
Q 010432          266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS  345 (511)
Q Consensus       266 Kp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~  345 (511)
                      ||+|||++                         ++..+||+|||+++...............++..|+|||++.+..++.
T Consensus       154 kp~nill~-------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  208 (290)
T cd05045         154 AARNVLVA-------------------------EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT  208 (290)
T ss_pred             hhheEEEc-------------------------CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcch
Confidence            99999998                         47789999999998654332221222345678899999998888999


Q ss_pred             cccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          346 RSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       346 ~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      ++|||||||++|||++ |..||....+..   +.....              .......+...+..+.+|+.+||+.+|.
T Consensus       209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~~i~~cl~~~P~  271 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGNPYPGIAPER---LFNLLK--------------TGYRMERPENCSEEMYNLMLTCWKQEPD  271 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHh--------------CCCCCCCCCCCCHHHHHHHHHHccCCcc
Confidence            9999999999999998 999996543211   111111              0011111222356789999999999999


Q ss_pred             CCCCHHHHHHHhcCC
Q 010432          425 ARPLMSEVVEALKPL  439 (511)
Q Consensus       425 ~RPs~~eil~~L~~l  439 (511)
                      +||++.++++.|+.+
T Consensus       272 ~Rp~~~~i~~~l~~~  286 (290)
T cd05045         272 KRPTFADISKELEKM  286 (290)
T ss_pred             cCCCHHHHHHHHHHH
Confidence            999999999999765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.3e-41  Score=334.88  Aligned_cols=272  Identities=32%  Similarity=0.437  Sum_probs=204.1

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC--
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED--  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~--  207 (511)
                      |.+++.||+|+||+||++.+...     ...++..||+|.++.... .....+.+|+++|++++||||+++++++...  
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPA-----NDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG   80 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccc-----cCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            48889999999999999875421     123677999999976533 2345688999999999999999999988653  


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+++|+|.+++...  .+++..++.++.|++.||.|||+++   |+||||||+|||++              
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~--------------  141 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLD--------------  141 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEc--------------
Confidence            4688999999999999998653  5899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 ++..+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       142 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~  210 (283)
T cd05080         142 -----------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSK  210 (283)
T ss_pred             -----------CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCC
Confidence                       46789999999998765432211 112234567899999998888999999999999999999999998


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ........ ......... .....+...++.......+...+..+.+|+.+||+.||++||++.+|++.|+.+
T Consensus       211 ~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         211 QSPPKKFE-EMIGPKQGQ-MTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCCcchhh-hhhcccccc-cchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            64322110 011000000 000011111111111122333457899999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.4e-42  Score=331.18  Aligned_cols=251  Identities=25%  Similarity=0.400  Sum_probs=201.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|++.+.||+|+||.||+|.++.          +..+|+|.+..... ....+.+|+.++++++|+||+++++++...+
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~----------~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRG----------KIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR   72 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecC----------CccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence            357888999999999999998753          44799999875433 3357889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|.+++......+++..++.++.||+.||+|||+.+   |+||||||+|||++               
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~---------------  134 (256)
T cd05059          73 PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVG---------------  134 (256)
T ss_pred             ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEEC---------------
Confidence            999999999999999999765567899999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                +++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       135 ----------~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~  203 (256)
T cd05059         135 ----------EDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE  203 (256)
T ss_pred             ----------CCCcEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCC
Confidence                      4778999999999865432211 1111234568999999998899999999999999999999 899997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ......   .......    .          .....+...+..+.+|+.+||..+|++||++.++++.|
T Consensus       204 ~~~~~~---~~~~~~~----~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         204 RFSNSE---VVESVSA----G----------YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCHHH---HHHHHHc----C----------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            543211   1111100    0          01111122457899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.6e-41  Score=333.46  Aligned_cols=250  Identities=27%  Similarity=0.383  Sum_probs=197.0

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||+|+||.||+++.+.         +|+.||+|.+......   ....+..|++++++++||||+++++++..+...++|
T Consensus         1 lg~G~~g~Vy~~~~~~---------~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv   71 (277)
T cd05607           1 LGKGGFGEVCAVQVKN---------TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLV   71 (277)
T ss_pred             CCCCCceEEEEEEEcc---------CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEE
Confidence            7999999999999875         6789999999753322   223456799999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          214 YEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||+++|+|..++... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++                   
T Consensus        72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~-------------------  129 (277)
T cd05607          72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLD-------------------  129 (277)
T ss_pred             EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEc-------------------
Confidence            9999999999888543 345889999999999999999999988   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  372 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~  372 (511)
                            ++..++|+|||++........   .....||..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus       130 ------~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~  200 (277)
T cd05607         130 ------DQGNCRLSDLGLAVELKDGKT---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK  200 (277)
T ss_pred             ------CCCCEEEeeceeeeecCCCce---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch
Confidence                  477899999999987644321   23357899999999999888999999999999999999999999754321


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ...  ..........          .... .....+.++.+|+.+||+.||.+||++.|+++.+...
T Consensus       201 ~~~--~~~~~~~~~~----------~~~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h  254 (277)
T cd05607         201 VAK--EELKRRTLED----------EVKF-EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKH  254 (277)
T ss_pred             hhH--HHHHHHhhcc----------cccc-ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcC
Confidence            111  1111111100          0000 0012356789999999999999999998877655543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=3.5e-42  Score=351.96  Aligned_cols=261  Identities=23%  Similarity=0.271  Sum_probs=202.7

Q ss_pred             HHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcc
Q 010432          122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       122 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv  198 (511)
                      .++....++|++.+.||+|+||.||+|++..         +++.||+|++.....   .....+.+|+.+++.++||||+
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~---------~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv  106 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS---------TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV  106 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECC---------CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCC
Confidence            3445566899999999999999999999876         678999999864321   2224577899999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ++++++..++..++|||||++|+|.+++...  .++...+..++.||+.||+|||+++   |+||||||+|||++     
T Consensus       107 ~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~-----  176 (371)
T cd05622         107 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLD-----  176 (371)
T ss_pred             eEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEEC-----
Confidence            9999999999999999999999999998543  5788889999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC----CCCccccchhHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGV  354 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~----~~~~~~DIwSlGv  354 (511)
                                          .++.+||+|||+++........ .....+||+.|||||++.+.    .++.++|||||||
T Consensus       177 --------------------~~~~ikL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGv  235 (371)
T cd05622         177 --------------------KSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  235 (371)
T ss_pred             --------------------CCCCEEEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccCCCccCCCccceeehhH
Confidence                                4778999999999876432211 12346799999999998753    3789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHH
Q 010432          355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEV  432 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~ei  432 (511)
                      +||||++|+.||........      ..........        +........+..+.+||.+||..++.+  |+++.+|
T Consensus       236 ilyell~G~~Pf~~~~~~~~------~~~i~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei  301 (371)
T cd05622         236 FLYEMLVGDTPFYADSLVGT------YSKIMNHKNS--------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEI  301 (371)
T ss_pred             HHHHHHhCCCCCCCCCHHHH------HHHHHcCCCc--------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHH
Confidence            99999999999975432111      0100000000        000011123577899999999844433  7799999


Q ss_pred             HHHh
Q 010432          433 VEAL  436 (511)
Q Consensus       433 l~~L  436 (511)
                      +++.
T Consensus       302 ~~h~  305 (371)
T cd05622         302 KRHL  305 (371)
T ss_pred             hcCc
Confidence            8865

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1e-41  Score=333.33  Aligned_cols=257  Identities=26%  Similarity=0.424  Sum_probs=197.9

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC-
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED-  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~-  207 (511)
                      |.+.++||+|+||.||+|.+...+       ....||+|.++....  ...+.+.+|+.+++.++|+||+++++++... 
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~-------~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   73 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDD-------SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTV   73 (272)
T ss_pred             CccccccCcccCceEEEeEEccCC-------CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCC
Confidence            356788999999999999886521       123699999876432  2235688999999999999999999987532 


Q ss_pred             -----CeEEEEEEccCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          208 -----DQRLLVYEFMPRGSLENHLFR-----RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       208 -----~~~~lv~E~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                           ...++||||+.+|+|.+++..     ....+++..+..++.||+.||+|||+++   |+||||||+|||++    
T Consensus        74 ~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~----  146 (272)
T cd05075          74 ESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLN----  146 (272)
T ss_pred             cccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEc----
Confidence                 246899999999999998742     2235889999999999999999999988   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           ++..+||+|||+++...............+++.|+|||++.+..++.++|||||||++|
T Consensus       147 ---------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~  205 (272)
T cd05075         147 ---------------------ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMW  205 (272)
T ss_pred             ---------------------CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHH
Confidence                                 47789999999998765433221122234677899999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          358 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       358 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||++ |+.||......   .+.....    ....          ...+...+..+.+||.+||+.||++|||+.+|++.|
T Consensus       206 el~~~g~~p~~~~~~~---~~~~~~~----~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  268 (272)
T cd05075         206 EIATRGQTPYPGVENS---EIYDYLR----QGNR----------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL  268 (272)
T ss_pred             HHHcCCCCCCCCCCHH---HHHHHHH----cCCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            9999 78898653221   1111111    0000          001112346789999999999999999999999998


Q ss_pred             cCC
Q 010432          437 KPL  439 (511)
Q Consensus       437 ~~l  439 (511)
                      +.+
T Consensus       269 ~~~  271 (272)
T cd05075         269 EKA  271 (272)
T ss_pred             Hhh
Confidence            753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=5.1e-42  Score=341.96  Aligned_cols=266  Identities=27%  Similarity=0.387  Sum_probs=206.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      .++|.+.+.||+|+||.||+|++.....  ....+...||+|.++.... .....+.+|+.++.++ +|+||+++++++.
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~--~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDK--EKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   94 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCC--cccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            4679999999999999999998754211  0112346799999986532 2335688899999999 7999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                      ..+..++||||+++|+|.+++....               ..+++..++.++.||+.||+|||+++   |+||||||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Ni  171 (307)
T cd05098          95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNV  171 (307)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHhe
Confidence            9999999999999999999996532               24788999999999999999999988   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccch
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  350 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIw  350 (511)
                      |++                         +++.+||+|||+++...............+++.|+|||++.+..++.++|||
T Consensus       172 ll~-------------------------~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  226 (307)
T cd05098         172 LVT-------------------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  226 (307)
T ss_pred             EEc-------------------------CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHH
Confidence            998                         4678999999999866432221112222345789999999988999999999


Q ss_pred             hHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          351 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       351 SlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      ||||++|||++ |..||......   .+.....    ..          .....+...+..+.+|+.+||..+|.+||++
T Consensus       227 slG~~l~el~~~g~~p~~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  289 (307)
T cd05098         227 SFGVLLWEIFTLGGSPYPGVPVE---ELFKLLK----EG----------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF  289 (307)
T ss_pred             HHHHHHHHHHcCCCCCCCcCCHH---HHHHHHH----cC----------CCCCCCCcCCHHHHHHHHHHcccChhhCcCH
Confidence            99999999998 88888643211   1111110    00          0111122335788999999999999999999


Q ss_pred             HHHHHHhcCCC
Q 010432          430 SEVVEALKPLP  440 (511)
Q Consensus       430 ~eil~~L~~l~  440 (511)
                      .+|++.|+.+.
T Consensus       290 ~evl~~l~~~~  300 (307)
T cd05098         290 KQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHHHHHH
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.3e-41  Score=335.01  Aligned_cols=274  Identities=26%  Similarity=0.370  Sum_probs=205.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe--
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE--  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~--  206 (511)
                      .+|++++.||+|+||.||+|....     ....++..||||.+........+.+.+|+++|++++||||+++++++..  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDP-----LQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecC-----CcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence            478889999999999999998642     1123678999999976654445678899999999999999999998754  


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....++||||+++|+|.+++......+++..++.++.|++.||.|||+++   |+||||||+|||++             
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~-------------  142 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVE-------------  142 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEEC-------------
Confidence            34688999999999999999765557899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCccee-eeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++|..+
T Consensus       143 ------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~  210 (284)
T cd05081         143 ------------SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK  210 (284)
T ss_pred             ------------CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCc
Confidence                        477899999999987654332211 1112345569999999888999999999999999999998876


Q ss_pred             CCCCCCCCchhHHHhhhhhhcc---ccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGE---RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      +......    ...........   ...+...+............+..+.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus       211 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         211 SCSPPAE----FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCCcchh----hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            6432110    00000000000   0000001111111111223356799999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=5.6e-42  Score=341.15  Aligned_cols=270  Identities=26%  Similarity=0.396  Sum_probs=209.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      ....+|.+.+.||+|+||.||+|++.....  .....+..||+|.+.... ......+.+|+.+++.+ +|+||++++++
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDK--DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCC--CCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            345678899999999999999998643111  011245689999987543 22345688999999999 89999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS  268 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~  268 (511)
                      +......++||||+++|+|.+++....               ..+++..++.++.||+.||.|||+++   |+||||||+
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~  166 (304)
T cd05101          90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAAR  166 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccc
Confidence            999999999999999999999996531               24778889999999999999999998   999999999


Q ss_pred             cEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCcccc
Q 010432          269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD  348 (511)
Q Consensus       269 NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D  348 (511)
                      |||++                         +++.+||+|||+++...............+++.|+|||++.+..++.++|
T Consensus       167 Nili~-------------------------~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         167 NVLVT-------------------------ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             eEEEc-------------------------CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            99998                         46789999999998765433222222345678899999999889999999


Q ss_pred             chhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          349 VYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       349 IwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      ||||||++|||++ |..||......   .+.....    ...          ....+..++..+.+|+.+||+.+|.+||
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~----~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp  284 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIPVE---ELFKLLK----EGH----------RMDKPANCTNELYMMMRDCWHAIPSHRP  284 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHH----cCC----------cCCCCCCCCHHHHHHHHHHcccChhhCC
Confidence            9999999999998 78888643221   1111110    000          0111223457889999999999999999


Q ss_pred             CHHHHHHHhcCCCCC
Q 010432          428 LMSEVVEALKPLPNL  442 (511)
Q Consensus       428 s~~eil~~L~~l~~~  442 (511)
                      ++.+|++.|+++..+
T Consensus       285 s~~e~l~~l~~~~~~  299 (304)
T cd05101         285 TFKQLVEDLDRILTL  299 (304)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999876443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.6e-42  Score=336.03  Aligned_cols=262  Identities=27%  Similarity=0.432  Sum_probs=207.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|.+.....    ..++..||+|.+..... .....+.+|+.+|+.++|+||+++++++.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   79 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVK----GEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCC----CCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence            34678899999999999999998864221    12457899999875532 22346889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      .....++||||+++|+|.+++....         ..+++..++.++.||+.||.|||+.+   |+||||||+|||++   
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~---  153 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVA---  153 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEc---
Confidence            9999999999999999999986421         23678889999999999999999988   99999999999998   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil  356 (511)
                                            .++.+||+|||+++...............+|..|+|||++.+..++.++|||||||++
T Consensus       154 ----------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  211 (277)
T cd05032         154 ----------------------EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL  211 (277)
T ss_pred             ----------------------CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence                                  4778999999999865543322222334578899999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |||++ |..||......   .......    ...          ....+..++..+.+|+.+||+.+|++|||+.+|++.
T Consensus       212 ~el~t~g~~p~~~~~~~---~~~~~~~----~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         212 WEMATLAEQPYQGLSNE---EVLKFVI----DGG----------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             HHhhccCCCCCccCCHH---HHHHHHh----cCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99998 89998654321   1111111    000          011122235788999999999999999999999998


Q ss_pred             hc
Q 010432          436 LK  437 (511)
Q Consensus       436 L~  437 (511)
                      |+
T Consensus       275 l~  276 (277)
T cd05032         275 LK  276 (277)
T ss_pred             hc
Confidence            86

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-42  Score=344.02  Aligned_cols=257  Identities=20%  Similarity=0.239  Sum_probs=199.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||++++..         +++.||||++....   ......+.+|+.++..++|+||+++++++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKN---------TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ   71 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECC---------CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe
Confidence            478999999999999999999876         57799999997532   122345788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..|+||||+++|+|.+++.+....+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~------------  136 (331)
T cd05597          72 DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLD------------  136 (331)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEEC------------
Confidence            999999999999999999999765567899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----CCCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DIwSlGvil~ell  360 (511)
                                   .++.+||+|||++......... ......||+.|||||++..     ..++.++|||||||++|||+
T Consensus       137 -------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~  202 (331)
T cd05597         137 -------------KNGHIRLADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML  202 (331)
T ss_pred             -------------CCCCEEEEECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh
Confidence                         4778999999999765443221 1223469999999999863     45788999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHh
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEAL  436 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~eil~~L  436 (511)
                      +|+.||.......      .......... ...+     .. .....+..+.+||.+||..++.+  |+++.+++++-
T Consensus       203 ~g~~Pf~~~~~~~------~~~~i~~~~~-~~~~-----~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp  267 (331)
T cd05597         203 YGETPFYAESLVE------TYGKIMNHKE-HFQF-----PP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP  267 (331)
T ss_pred             hCCCCCCCCCHHH------HHHHHHcCCC-cccC-----CC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence            9999997543211      1000000000 0000     00 01113567889999988654433  78999998863

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.3e-42  Score=352.26  Aligned_cols=254  Identities=25%  Similarity=0.333  Sum_probs=197.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||.||+|++..         +++.||||++....   ......+.+|+.++..++|+||+++++++.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   71 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKD---------TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ   71 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            368889999999999999999875         67899999997532   122345778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+.+|||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~------------  135 (360)
T cd05627          72 DKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLD------------  135 (360)
T ss_pred             cCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEEC------------
Confidence            999999999999999999998654 46899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc---------------------------------eeeeeccccccc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---------------------------------HVSTRVMGTYGY  332 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---------------------------------~~~~~~~Gt~~y  332 (511)
                                   .++.+||+|||+++........                                 ......+||+.|
T Consensus       136 -------------~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  202 (360)
T cd05627         136 -------------AKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDY  202 (360)
T ss_pred             -------------CCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccc
Confidence                         4778999999998754321100                                 001235799999


Q ss_pred             cCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHH
Q 010432          333 AAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA  412 (511)
Q Consensus       333 ~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (511)
                      +|||++.+..++.++|||||||++|||++|+.||..........   .+   ......   ..   +...  ...+..+.
T Consensus       203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~---~i---~~~~~~---~~---~p~~--~~~s~~~~  268 (360)
T cd05627         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYR---KV---MNWKET---LV---FPPE--VPISEKAK  268 (360)
T ss_pred             cCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHH---HH---HcCCCc---ee---cCCC--CCCCHHHH
Confidence            99999999999999999999999999999999997654321110   00   000000   00   0000  11246788


Q ss_pred             HHHHHhcccCCCCCCC---HHHHHHH
Q 010432          413 QLAAHCLSRDPKARPL---MSEVVEA  435 (511)
Q Consensus       413 ~Li~~cl~~dP~~RPs---~~eil~~  435 (511)
                      +||.+|+. ||.+|++   +.+++++
T Consensus       269 ~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         269 DLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             HHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            99999874 9999995   5566543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=7.8e-42  Score=343.18  Aligned_cols=243  Identities=25%  Similarity=0.339  Sum_probs=194.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCC-CCCcceEeeEEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLV-HLNLVKLIGYCI  205 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~-H~nIv~l~~~~~  205 (511)
                      +|+..+.||+|+||.||+|++..         +++.||||++.....   ...+.+..|..++..+. |++|+++++++.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~   71 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKG---------TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ   71 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe
Confidence            46778899999999999999865         678999999975422   22345778999998885 577888999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..|+||||+++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~------------  135 (323)
T cd05615          72 TVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLD------------  135 (323)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEEC------------
Confidence            999999999999999999998543 46899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       136 -------------~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p  200 (323)
T cd05615         136 -------------SEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP  200 (323)
T ss_pred             -------------CCCCEEEeccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCC
Confidence                         477899999999986433221  12335699999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |......   .+.....   ..            ...++...+..+.+|+.+||+.||.+|++..
T Consensus       201 f~~~~~~---~~~~~i~---~~------------~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         201 FDGEDED---ELFQSIM---EH------------NVSYPKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             CCCCCHH---HHHHHHH---hC------------CCCCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence            9764321   1111111   00            0011122356789999999999999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.5e-42  Score=339.14  Aligned_cols=259  Identities=25%  Similarity=0.398  Sum_probs=201.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|....++       ....+++|.++... ....+.+.+|+.++.++ +||||+++++++..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~-------~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~   74 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDG-------LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN   74 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCC-------CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc
Confidence            47889999999999999999886532       12357899887432 22335688999999999 79999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      .+..++||||+++|+|.+++....               ..+++..++.++.||+.||+|||+++   |+||||||+|||
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil  151 (297)
T cd05089          75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVL  151 (297)
T ss_pred             CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEE
Confidence            999999999999999999996432               24788899999999999999999988   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      ++                         ++..+||+|||++........   ......+..|+|||++.+..++.++||||
T Consensus       152 l~-------------------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwS  203 (297)
T cd05089         152 VG-------------------------ENLASKIADFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSDVWS  203 (297)
T ss_pred             EC-------------------------CCCeEEECCcCCCccccceec---cCCCCcCccccCchhhccCCCCchhhHHH
Confidence            98                         467899999999875322111   11122356799999998889999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          352 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       352 lGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |||++|||++ |..||.......   +.....              .......+...+..+.+|+.+||+.+|.+||++.
T Consensus       204 lG~il~el~t~g~~pf~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  266 (297)
T cd05089         204 FGVLLWEIVSLGGTPYCGMTCAE---LYEKLP--------------QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFA  266 (297)
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHH---HHHHHh--------------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            9999999997 999997543211   111100              0011111222356789999999999999999999


Q ss_pred             HHHHHhcCCCCC
Q 010432          431 EVVEALKPLPNL  442 (511)
Q Consensus       431 eil~~L~~l~~~  442 (511)
                      +|++.|+.+...
T Consensus       267 ~i~~~l~~~~~~  278 (297)
T cd05089         267 QISVQLSRMLEA  278 (297)
T ss_pred             HHHHHHHHHHHh
Confidence            999998766543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2e-41  Score=335.94  Aligned_cols=272  Identities=26%  Similarity=0.418  Sum_probs=204.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCC-------ccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcce
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAP-------VKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~-------~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      .++|++.+.||+|+||.||++.+.......       ....++..||+|++...... ....+.+|+.+|+.++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            357999999999999999998764321100       11224567999999765322 3357889999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      +++++...+..++||||+++|+|.+++....          ..+++..+..++.||+.||+|||+++   |+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence            9999999999999999999999999986532          23677889999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         +++.++|+|||+++...............++..|+|||++.++.++.++||
T Consensus       161 ili~-------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di  215 (296)
T cd05095         161 CLVG-------------------------KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDV  215 (296)
T ss_pred             EEEc-------------------------CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhh
Confidence            9998                         467899999999986544332222223345678999999888899999999


Q ss_pred             hhHHHHHHHHHh--CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          350 YSFGVVLLEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       350 wSlGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |||||++|||++  |..||........   .............  ...     ...+..++..+.+|+.+||+.||.+||
T Consensus       216 wSlG~~l~el~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp  285 (296)
T cd05095         216 WAFGVTLWEILTLCKEQPYSQLSDEQV---IENTGEFFRDQGR--QVY-----LPKPALCPDSLYKLMLSCWRRNAKERP  285 (296)
T ss_pred             hHHHHHHHHHHHhCCCCCccccChHHH---HHHHHHHHhhccc--ccc-----CCCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            999999999998  6788865432211   1111000000000  000     001122347789999999999999999


Q ss_pred             CHHHHHHHhc
Q 010432          428 LMSEVVEALK  437 (511)
Q Consensus       428 s~~eil~~L~  437 (511)
                      ++.+|++.|+
T Consensus       286 ~~~~i~~~l~  295 (296)
T cd05095         286 SFQEIHATLL  295 (296)
T ss_pred             CHHHHHHHHh
Confidence            9999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-43  Score=353.44  Aligned_cols=254  Identities=25%  Similarity=0.410  Sum_probs=211.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +.|+++..||.|+||.||+|..+.         ++...|.|++........++++-|++||..++||+||+|++.|..++
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nke---------t~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en  102 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKE---------TKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN  102 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhccc---------chhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC
Confidence            457778889999999999998775         67788899998777666788999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .+||+.|||.||-....+..-+..+.+.++..+++|++.||.|||+++   |||||||..|||+.               
T Consensus       103 kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~T---------------  164 (1187)
T KOG0579|consen  103 KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLT---------------  164 (1187)
T ss_pred             ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEE---------------
Confidence            999999999999999888777788999999999999999999999999   99999999999999               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHhCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                .++.++|+|||.+.......  .....+.|||+|||||++.     ..+|+.++||||||++|.||..+.
T Consensus       165 ----------ldGdirLADFGVSAKn~~t~--qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiE  232 (1187)
T KOG0579|consen  165 ----------LDGDIRLADFGVSAKNKSTR--QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIE  232 (1187)
T ss_pred             ----------ecCcEeeecccccccchhHH--hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccC
Confidence                      48889999999987543322  2244589999999999875     468999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +|-....+..  -++..+..   +        .|.+  ..+..++..+.+++.+||..||..||++++++++-
T Consensus       233 PPHhelnpMR--VllKiaKS---e--------PPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp  290 (1187)
T KOG0579|consen  233 PPHHELNPMR--VLLKIAKS---E--------PPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP  290 (1187)
T ss_pred             CCccccchHH--HHHHHhhc---C--------CCcc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence            9976544321  11111111   0        1111  12445678899999999999999999999999853

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.5e-41  Score=331.48  Aligned_cols=261  Identities=25%  Similarity=0.434  Sum_probs=206.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|+..+.||+|+||.||+|++...+.      ....||+|.+..... .....+.+|+.++++++|+||+++++++..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGR------KEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK   77 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCC------CceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence            3468888999999999999999865321      234799999876532 234568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+++++|.+++......+++..+..++.|++.||+|||+.+   |+||||||+|||++             
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~-------------  141 (268)
T cd05063          78 FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVN-------------  141 (268)
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEc-------------
Confidence            99999999999999999999766667899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceee-eeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVS-TRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~-~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                  ++..+||+|||++............ .....+..|+|||++.+..++.++|||||||++|||++ |..
T Consensus       142 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~  209 (268)
T cd05063         142 ------------SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGER  209 (268)
T ss_pred             ------------CCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCC
Confidence                        4778999999999866443222111 11223567999999988889999999999999999998 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||......   .......    ..          .........+..+.+|+.+||+.+|++||++.+|++.|+++
T Consensus       210 p~~~~~~~---~~~~~i~----~~----------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         210 PYWDMSNH---EVMKAIN----DG----------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCcCCHH---HHHHHHh----cC----------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99654321   1111111    00          01111122356789999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.5e-41  Score=346.09  Aligned_cols=265  Identities=23%  Similarity=0.310  Sum_probs=197.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|++..         +|..||||++.....  .....+.+|+.+++.++||||+++++++.
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   90 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTV---------LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT   90 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcC---------CCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeec
Confidence            4689999999999999999998865         678999999975422  23356789999999999999999999986


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ...      ..|+||||+. ++|.+.+..   .+++..+..++.||+.||.|||+++   |+||||||+|||++      
T Consensus        91 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~------  157 (359)
T cd07876          91 PQKSLEEFQDVYLVMELMD-ANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK------  157 (359)
T ss_pred             cCCCccccceeEEEEeCCC-cCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEC------
Confidence            543      4799999995 467776632   4788889999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       158 -------------------~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  215 (359)
T cd07876         158 -------------------SDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL  215 (359)
T ss_pred             -------------------CCCCEEEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHH
Confidence                               47789999999998643321   12335789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchh-HH-----------H----hhhhhhcccccc-----ccccCCcc---CCCCCHHHHHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHN-LV-----------E----WARPHLGERRRF-----YRLIDPRL---EGHFSIKGAQKAAQLA  415 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~-~~-----------~----~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~Li  415 (511)
                      ++|+.||.......... ..           .    ............     ........   ........+..+.+||
T Consensus       216 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  295 (359)
T cd07876         216 VKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLL  295 (359)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHH
Confidence            99999997653211100 00           0    000000000000     00000000   0001112246789999


Q ss_pred             HHhcccCCCCCCCHHHHHHHh
Q 010432          416 AHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       416 ~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .+||+.||++|||+.|++++-
T Consensus       296 ~~mL~~dP~~R~t~~e~l~hp  316 (359)
T cd07876         296 SKMLVIDPDKRISVDEALRHP  316 (359)
T ss_pred             HHHhccCcccCCCHHHHhcCc
Confidence            999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=5.2e-42  Score=351.25  Aligned_cols=267  Identities=25%  Similarity=0.342  Sum_probs=200.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++++.||+|+||.||+|.+..         +++.||||.+....  ....+.+.+|+.+|+.++|+||+++++++...
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   71 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPR---------DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPP   71 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECC---------CCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCC
Confidence            47889999999999999998765         67799999986532  22335688999999999999999999999877


Q ss_pred             C-----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          208 D-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       208 ~-----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +     ..|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+++   |+||||||+|||++         
T Consensus        72 ~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~---------  137 (372)
T cd07853          72 HIDPFEEIYVVTELMQ-SDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVN---------  137 (372)
T ss_pred             CccccceEEEEeeccc-cCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEEC---------
Confidence            6     7899999995 688888754 347899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHh
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~ellt  361 (511)
                                      .++.+||+|||+++........ ......+|+.|+|||++.+. .++.++|||||||++|||++
T Consensus       138 ----------------~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~  200 (372)
T cd07853         138 ----------------SNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLG  200 (372)
T ss_pred             ----------------CCCCEEeccccceeecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHc
Confidence                            4778999999999865432211 12334689999999998864 57999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhh---------hcc-cccccc-ccC-CccC--CCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPH---------LGE-RRRFYR-LID-PRLE--GHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~-~~~-~~~~--~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |+.||...........+......         ... ...+.. ... +...  .......++.+.+||.+||+.||.+||
T Consensus       201 g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~  280 (372)
T cd07853         201 RRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRI  280 (372)
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCc
Confidence            99999765432221111100000         000 000000 000 0000  001112356789999999999999999


Q ss_pred             CHHHHHHHh
Q 010432          428 LMSEVVEAL  436 (511)
Q Consensus       428 s~~eil~~L  436 (511)
                      |+.+++++-
T Consensus       281 t~~e~l~hp  289 (372)
T cd07853         281 SAADALAHP  289 (372)
T ss_pred             CHHHHhcCH
Confidence            999999753

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.2e-41  Score=328.71  Aligned_cols=251  Identities=25%  Similarity=0.392  Sum_probs=197.7

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~  214 (511)
                      .||+|+||.||+|.+...       ..+..||+|++...... ..+.+.+|+.++++++|+||+++++++. .+..++||
T Consensus         2 ~ig~G~~g~v~~~~~~~~-------~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~   73 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMR-------KKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVM   73 (257)
T ss_pred             ccCCCCcccEEEEEEecC-------CCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEE
Confidence            389999999999987532       13567999999765332 2356889999999999999999999875 45789999


Q ss_pred             EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccccc
Q 010432          215 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN  294 (511)
Q Consensus       215 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~  294 (511)
                      ||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++                     
T Consensus        74 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~---------------------  129 (257)
T cd05115          74 EMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLV---------------------  129 (257)
T ss_pred             EeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEc---------------------
Confidence            999999999999766667999999999999999999999988   99999999999998                     


Q ss_pred             ccccccCceeeecCCCcccCCCCCccee-eeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 010432          295 NMLFQDYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPN  372 (511)
Q Consensus       295 ~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~  372 (511)
                          .+..+||+|||++........... .....++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus       130 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~  205 (257)
T cd05115         130 ----NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP  205 (257)
T ss_pred             ----CCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence                477899999999986544322211 111234678999999988889999999999999999996 99999754321


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .   .......              ......+..++.++.+|+.+||..||++||++.+|++.|+.+
T Consensus       206 ~---~~~~~~~--------------~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         206 E---VMSFIEQ--------------GKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             H---HHHHHHC--------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            1   1111100              001112223457889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.6e-41  Score=332.12  Aligned_cols=253  Identities=25%  Similarity=0.360  Sum_probs=200.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.++||+|+||.||+|.+..         ++..||||++..... .....+.+|+.++++++||||+++++++...
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   71 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLL---------TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE   71 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcC---------CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC
Confidence            367888999999999999998765         677999999976532 2235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|..+.     .+++..+..++.|++.||.|||+.+   |+|+||||+|||++              
T Consensus        72 ~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~--------------  129 (279)
T cd06619          72 NRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVN--------------  129 (279)
T ss_pred             CEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEEC--------------
Confidence            9999999999999997553     4678888999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||++.......    .....||..|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       130 -----------~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~  194 (279)
T cd06619         130 -----------TRGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYP  194 (279)
T ss_pred             -----------CCCCEEEeeCCcceeccccc----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCch
Confidence                       47789999999998654322    233578999999999998899999999999999999999999997


Q ss_pred             CCCCCCchh-HHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          368 KNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       368 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ......... ..........       ...+.+.   ....+.++.+|+.+||+.||++||++.+++++..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         195 QIQKNQGSLMPLQLLQCIVD-------EDPPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF  255 (279)
T ss_pred             hhcccccccchHHHHHHHhc-------cCCCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence            532211110 0000000000       0001110   1123467899999999999999999999998643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.3e-41  Score=332.34  Aligned_cols=260  Identities=25%  Similarity=0.426  Sum_probs=204.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|++.+.||+|+||.||+|.+...+.      .+..||||.+.... ......|..|+.+++.++||||+++++++..+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~   77 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGK------REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS   77 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCC------CceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC
Confidence            357788999999999999999876332      24579999987642 22345789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+++|+|.+++......+++..++.++.|++.||.|||+++   ++|+||||+|||++              
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~--------------  140 (269)
T cd05065          78 RPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVN--------------  140 (269)
T ss_pred             CceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEc--------------
Confidence            9999999999999999999766667899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeee-cc--ccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR-VM--GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~-~~--Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                 .+..+||+|||++.............. ..  ++..|+|||++.+..++.++|||||||++|||++ |.
T Consensus       141 -----------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~  209 (269)
T cd05065         141 -----------SNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  209 (269)
T ss_pred             -----------CCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCC
Confidence                       477899999999986544322111111 11  2457999999998999999999999999999886 99


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .||......   .........              .....+.+.+..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus       210 ~p~~~~~~~---~~~~~i~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         210 RPYWDMSNQ---DVINAIEQD--------------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CCCCCCCHH---HHHHHHHcC--------------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999654321   111111100              00011123356788999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-41  Score=329.06  Aligned_cols=254  Identities=26%  Similarity=0.376  Sum_probs=203.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-----cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-----GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ++|.+.+.||+|+||.||+|.+..         +++.||+|.+......     ....+.+|+.++++++||||++++++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~---------~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   72 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVD---------TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGC   72 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcC---------CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEE
Confidence            478999999999999999998765         6779999998754321     12457889999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +..++..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++          
T Consensus        73 ~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~----------  138 (263)
T cd06625          73 LRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRD----------  138 (263)
T ss_pred             EccCCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEc----------
Confidence            99999999999999999999998654 46889999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCccee-eeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                     +++.++|+|||+++.......... .....|+..|+|||++.+..++.++|||||||++|||++|
T Consensus       139 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g  203 (263)
T cd06625         139 ---------------SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTE  203 (263)
T ss_pred             ---------------CCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhC
Confidence                           467899999999976543221111 1234688899999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +.||.......  .....              ........++...+..+.+|+.+||..+|.+||++.+++++.
T Consensus       204 ~~p~~~~~~~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         204 KPPWAEFEAMA--AIFKI--------------ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             CCCccccchHH--HHHHH--------------hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence            99996532210  00000              000011122233457789999999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.7e-42  Score=332.84  Aligned_cols=256  Identities=23%  Similarity=0.365  Sum_probs=195.9

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~  214 (511)
                      +.||+|+||.||+|.+...+..  .......||+|.+........+.+.+|+.+++.++||||+++++++..++..++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDY--GELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccc--cccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence            3699999999999987643211  00124468999887654444467889999999999999999999999989999999


Q ss_pred             EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccccc
Q 010432          215 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN  294 (511)
Q Consensus       215 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~  294 (511)
                      ||+++|+|..++......+++..++.++.||+.||.|||+++   |+||||||+|||++..+....+             
T Consensus        79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~-------------  142 (258)
T cd05078          79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTG-------------  142 (258)
T ss_pred             ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccC-------------
Confidence            999999999999776667899999999999999999999988   9999999999999853321111             


Q ss_pred             ccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCC-CCCCCCCCC
Q 010432          295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR-RSMDKNRPN  372 (511)
Q Consensus       295 ~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~-~pf~~~~~~  372 (511)
                          ....++++|||++......      ....|+..|+|||++.+ ..++.++|||||||++|||++|. .||......
T Consensus       143 ----~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~  212 (258)
T cd05078         143 ----NPPFIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ  212 (258)
T ss_pred             ----CCceEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH
Confidence                2334899999998765432      22468899999999986 45799999999999999999995 555432211


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ..   ..    .....            ..++.....++.+|+.+||+.||++|||+.+|++.|+
T Consensus       213 ~~---~~----~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         213 KK---LQ----FYEDR------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HH---HH----HHHcc------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            10   00    00000            0111122467899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.9e-41  Score=330.83  Aligned_cols=260  Identities=25%  Similarity=0.425  Sum_probs=206.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|++.+.||+|+||.||+|.+...+.      .+..||+|.++..... ....+.+|+.++++++||||+++++++..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   77 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGK------REIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS   77 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCC------CceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            578889999999999999998764221      3457999998764322 235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++......+++..++.++.|++.||.|||+++   |+||||||+|||++              
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~--------------  140 (267)
T cd05066          78 KPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVN--------------  140 (267)
T ss_pred             CccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEEC--------------
Confidence            9999999999999999999776667899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceee-eeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVS-TRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~-~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                 .+..++|+|||++............ ....++..|+|||++.+..++.++|||||||++||+++ |..|
T Consensus       141 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p  209 (267)
T cd05066         141 -----------SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP  209 (267)
T ss_pred             -----------CCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCC
Confidence                       4778999999999876543221111 11234568999999998899999999999999999886 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.......   ......    ...          ....+...+..+.+|+.+||+.+|.+||++.++++.|+.+
T Consensus       210 ~~~~~~~~---~~~~~~----~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         210 YWEMSNQD---VIKAIE----EGY----------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             cccCCHHH---HHHHHh----CCC----------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            97543211   111111    000          0011122356789999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.9e-41  Score=332.32  Aligned_cols=256  Identities=23%  Similarity=0.411  Sum_probs=194.7

Q ss_pred             ccccCCCceEEEEEEcCCCCCC---------------ccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAP---------------VKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~---------------~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l  200 (511)
                      .||+|+||.||+|.+...+...               ........||+|++..........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            6999999999999875322111               0122345799999976544334568899999999999999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ++++..+...+|||||+++|+|..++......+++..++.++.||+.||+|||+++   |+||||||+|||++..+... 
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~-  157 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAE-  157 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCccc-
Confidence            99999999999999999999999998766667899999999999999999999988   99999999999997421100 


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~el  359 (511)
                                       .....+||+|||++......      ....++..|+|||++.+ ..++.++|||||||++|||
T Consensus       158 -----------------~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         158 -----------------GTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             -----------------CccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence                             01335899999998654322      12357889999998875 5689999999999999999


Q ss_pred             H-hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          360 L-TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       360 l-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      + +|..||..........   ..    ....        .+..    .....+.+||.+||+.+|++||++.+|++.|.
T Consensus       215 ~~~g~~p~~~~~~~~~~~---~~----~~~~--------~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         215 CFDGEVPLKERTPSEKER---FY----EKKH--------RLPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HhCCCCCccccChHHHHH---HH----Hhcc--------CCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            5 6899987543321111   10    0000        0011    11356889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.8e-41  Score=328.11  Aligned_cols=250  Identities=27%  Similarity=0.391  Sum_probs=204.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|.+.+.||+|+||.||+|.+..         ++..|++|.+.....  .....+.+|+.++++++||||+++++++...
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   71 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKA---------DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK   71 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcC---------CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC
Confidence            47788899999999999999875         577999999875432  2345688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++... ...+++..++.++.||+.||.|||+.+   |+|+||||+||+++             
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~-------------  135 (256)
T cd08529          72 GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLD-------------  135 (256)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEe-------------
Confidence            9999999999999999999764 457899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||+++........  .....|++.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       136 ------------~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  201 (256)
T cd08529         136 ------------AYDNVKIGDLGVAKLLSDNTNF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF  201 (256)
T ss_pred             ------------CCCCEEEcccccceeccCccch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCC
Confidence                        4778999999999876543221  23356899999999999989999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....   ........   .          . ....++...+..+.+++.+||+.+|++||++.+++++
T Consensus       202 ~~~~~---~~~~~~~~---~----------~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         202 DANNQ---GALILKII---R----------G-VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCCCH---HHHHHHHH---c----------C-CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            75431   11111100   0          0 0111122345778999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=2.8e-41  Score=327.75  Aligned_cols=249  Identities=27%  Similarity=0.373  Sum_probs=196.6

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      .||+|+||.||+|.++..       .++..||+|+++.....  ..+.+.+|+.+++.++|+||+++++++. .+..++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv   73 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMK-------KSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLV   73 (257)
T ss_pred             cCCCcCCcceEEeEEecC-------CCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEE
Confidence            589999999999976532       25678999998755322  2356889999999999999999999875 4567899


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++|+|.+++... ..+++..+..++.|++.||+|||+++   |+||||||.|||++                    
T Consensus        74 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~--------------------  129 (257)
T cd05116          74 MELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLV--------------------  129 (257)
T ss_pred             EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEc--------------------
Confidence            9999999999998644 46899999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRP  371 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~  371 (511)
                           ++..+||+|||+++......... ......++..|+|||++....++.++|||||||++|||++ |..||.....
T Consensus       130 -----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~  204 (257)
T cd05116         130 -----TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG  204 (257)
T ss_pred             -----CCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                 46779999999998765433221 1122344679999999988889999999999999999998 9999975432


Q ss_pred             CCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      .   ........    .          .....+...+.++.+||.+||+.||++||++.+|.+.|+.
T Consensus       205 ~---~~~~~i~~----~----------~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         205 N---EVTQMIES----G----------ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             H---HHHHHHHC----C----------CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            1   11111110    0          0111122345778999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.1e-41  Score=336.56  Aligned_cols=266  Identities=25%  Similarity=0.362  Sum_probs=203.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||.||++.+..         ++..||+|.+...... ...++.+|++++.+++||||+++++++..+
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   71 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRP---------SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD   71 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcC---------CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            368899999999999999998765         6778999998755322 234688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++... ..+++..+..++.||+.||.|||+ ++   |+||||||+|||++             
T Consensus        72 ~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~-------------  134 (308)
T cd06615          72 GEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVN-------------  134 (308)
T ss_pred             CEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEe-------------
Confidence            9999999999999999999654 568999999999999999999997 46   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +++.+||+|||++.......    .....|+..|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       135 ------------~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~  198 (308)
T cd06615         135 ------------SRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPI  198 (308)
T ss_pred             ------------cCCcEEEccCCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                        46779999999987653321    23357899999999998888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhcccc----------------ccccccCC---ccCCCCC-HHHHHHHHHHHHHhcccCCCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERR----------------RFYRLIDP---RLEGHFS-IKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~---~~~~~~~-~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      .......................                ...+..+.   ......+ ...+..+.+|+.+||..||++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  278 (308)
T cd06615         199 PPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKER  278 (308)
T ss_pred             CCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhC
Confidence            65432211111100000000000                00000000   0000000 1235678999999999999999


Q ss_pred             CCHHHHHHHh
Q 010432          427 PLMSEVVEAL  436 (511)
Q Consensus       427 Ps~~eil~~L  436 (511)
                      |++.+|+++.
T Consensus       279 pt~~~ll~~~  288 (308)
T cd06615         279 ADLKELTKHP  288 (308)
T ss_pred             cCHHHHhcCh
Confidence            9999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.1e-41  Score=333.98  Aligned_cols=252  Identities=31%  Similarity=0.418  Sum_probs=200.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .|+..++||+|+||.||+|.+..         +++.||||.+.......   ...+.+|+.++++++|+||+.+++.+..
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~   71 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRA---------TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET   71 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcC---------CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec
Confidence            36778899999999999999876         67899999987543222   2357789999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+..++||||+++|+|.+++... ...+++..++.++.|++.||.|||+.+   |+||||||+|||++            
T Consensus        72 ~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~------------  136 (285)
T cd05630          72 KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLD------------  136 (285)
T ss_pred             CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEEC------------
Confidence            99999999999999999988543 346899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.++|+|||++........   .....||..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       137 -------------~~~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~P  200 (285)
T cd05630         137 -------------DHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP  200 (285)
T ss_pred             -------------CCCCEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence                         467799999999976543221   1234789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      |...............   ..       ...    ..++...+..+.+|+.+||+.||.+|||     +.+++++
T Consensus       201 f~~~~~~~~~~~~~~~---~~-------~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         201 FQQRKKKIKREEVERL---VK-------EVQ----EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             CCCCCccchHHHHHhh---hh-------hhh----hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence            9764322111110000   00       000    0111223467899999999999999999     7888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-42  Score=351.07  Aligned_cols=252  Identities=28%  Similarity=0.427  Sum_probs=207.8

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      ..+.++||+|.||+|++|.|..-..      +-..||||.++.+... ...+|++|+.+|.+|+|+|+|+|||+..+ ..
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psg------k~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp  184 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSG------KHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QP  184 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCC------cEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence            4455789999999999999976322      3457999999887655 55789999999999999999999999887 67


Q ss_pred             EEEEEEccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          210 RLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      +.||||+++.|+|.+.|++ ....|.......++.|||.||.||.+++   +|||||..+||||..              
T Consensus       185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllas--------------  247 (1039)
T KOG0199|consen  185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLAS--------------  247 (1039)
T ss_pred             hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecc--------------
Confidence            8899999999999999986 4456888889999999999999999988   999999999999985              


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeee-eccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVST-RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~-~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 ...||||||||.+.+...+...... ...-...|+|||.+....++.++|||+|||+||||+| |..||
T Consensus       248 -----------prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW  316 (1039)
T KOG0199|consen  248 -----------PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPW  316 (1039)
T ss_pred             -----------cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCC
Confidence                       5569999999999987765544322 2344678999999999999999999999999999998 67888


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      .+......                 .+.+|..-+..-+..|+++++++|..||..+|.+||+|..|.+
T Consensus       317 ~G~~g~qI-----------------L~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  317 VGCRGIQI-----------------LKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             CCCCHHHH-----------------HHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            76543211                 1222222223344567899999999999999999999999974

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.6e-41  Score=335.23  Aligned_cols=265  Identities=26%  Similarity=0.404  Sum_probs=205.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ...++|++.++||+|+||.||+|.++....    ...+..||+|.+..... .....+.+|+.+++.++|+||+++++++
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   78 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIK----GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV   78 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCC----CCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            346789999999999999999998753111    11356899999875432 2234578899999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      ...+..++||||+++|+|.+++....         ..+.+..+..++.||+.||.|||+++   |+||||||+|||++  
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~--  153 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVA--  153 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEc--
Confidence            99999999999999999999996421         23456778899999999999999988   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                             .+..+||+|||+++...............++..|+|||++.+..++.++|||||||+
T Consensus       154 -----------------------~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~  210 (288)
T cd05061         154 -----------------------HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV  210 (288)
T ss_pred             -----------------------CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence                                   477899999999986544332222223346778999999998899999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          356 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       356 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      +|||++ |..||......   .......             +.. ....+...+..+.+|+.+||+.||++||++.++++
T Consensus       211 l~el~~~~~~p~~~~~~~---~~~~~~~-------------~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  273 (288)
T cd05061         211 LWEITSLAEQPYQGLSNE---QVLKFVM-------------DGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN  273 (288)
T ss_pred             HHHHHhCCCCCCCCCCHH---HHHHHHH-------------cCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999998 78888653221   1111110             000 00111123468999999999999999999999999


Q ss_pred             HhcCC
Q 010432          435 ALKPL  439 (511)
Q Consensus       435 ~L~~l  439 (511)
                      .|+..
T Consensus       274 ~l~~~  278 (288)
T cd05061         274 LLKDD  278 (288)
T ss_pred             HHHhh
Confidence            98764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.9e-41  Score=340.40  Aligned_cols=256  Identities=20%  Similarity=0.251  Sum_probs=199.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.++||+|+||.||++++..         +++.||+|++.....   .....+.+|+.++..++|+||+++++++.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKN---------ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ   71 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC---------CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence            478899999999999999999875         577999999964321   12234778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..||||||+++|+|.+++.+....+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~------------  136 (332)
T cd05623          72 DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMD------------  136 (332)
T ss_pred             cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEC------------
Confidence            999999999999999999999765567899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~ell  360 (511)
                                   .++.+||+|||++......... .....+||+.|||||++.     ...++.++|||||||+||||+
T Consensus       137 -------------~~~~~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell  202 (332)
T cd05623         137 -------------MNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML  202 (332)
T ss_pred             -------------CCCCEEEeecchheecccCCcc-eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHh
Confidence                         4778999999999765432221 223357999999999986     346889999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~eil~~  435 (511)
                      +|+.||........   ...   .......+      .+. ......+..+.+|+.+||..++.+  |+++.+++++
T Consensus       203 ~g~~Pf~~~~~~~~---~~~---i~~~~~~~------~~p-~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         203 YGETPFYAESLVET---YGK---IMNHKERF------QFP-AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             cCCCCCCCCCHHHH---HHH---HhCCCccc------cCC-CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            99999975432111   110   11000000      000 011123578899999999765544  6899999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2.1e-41  Score=334.07  Aligned_cols=265  Identities=25%  Similarity=0.334  Sum_probs=195.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCC---CCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDL---VHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l---~H~nIv~l~~~~  204 (511)
                      +|++.+.||+|+||.||+|++..         +++.||+|.++.....  ....+.+|+.+++.+   +||||+++++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~   71 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPH---------SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVC   71 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECC---------CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeee
Confidence            48888999999999999999876         6789999999754322  223456777777665   799999999988


Q ss_pred             Ee-----CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          205 IE-----DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       205 ~~-----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ..     ....++||||+. ++|.+++.... ..+++..+..++.||+.||.|||+++   |+||||||+|||++     
T Consensus        72 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~-----  142 (288)
T cd07863          72 ATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVT-----  142 (288)
T ss_pred             ccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC-----
Confidence            64     345789999996 58988886533 35899999999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                          .++.+||+|||+++.......   .....||..|+|||++.+..++.++|||||||++||
T Consensus       143 --------------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~  199 (288)
T cd07863         143 --------------------SGGQVKLADFGLARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE  199 (288)
T ss_pred             --------------------CCCCEEECccCccccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHH
Confidence                                477899999999987543221   223568999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchh-HHHhhhh----hhcccccc-ccccCCc---cCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          359 MLTGRRSMDKNRPNGEHN-LVEWARP----HLGERRRF-YRLIDPR---LEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~-~~~~~~~----~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      |++|++||.......... +......    .+...... .....+.   .........+..+.+|+.+||+.||.+|||+
T Consensus       200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  279 (288)
T cd07863         200 MFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISA  279 (288)
T ss_pred             HHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCH
Confidence            999999997543321110 1110000    00000000 0000000   0001111235678899999999999999999


Q ss_pred             HHHHHH
Q 010432          430 SEVVEA  435 (511)
Q Consensus       430 ~eil~~  435 (511)
                      .+++.+
T Consensus       280 ~~~l~h  285 (288)
T cd07863         280 FRALQH  285 (288)
T ss_pred             HHHhcC
Confidence            999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=8.2e-42  Score=345.90  Aligned_cols=265  Identities=29%  Similarity=0.405  Sum_probs=202.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+....    ...+++.||||+++..... ....+.+|+.+|.++ +|+||+++++++
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   80 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCC----ccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence            4568999999999999999999864311    1225789999999765332 234688999999999 789999999988


Q ss_pred             EeC-CeEEEEEEccCCCCHHHHHhhCC-----------------------------------------------------
Q 010432          205 IED-DQRLLVYEFMPRGSLENHLFRRS-----------------------------------------------------  230 (511)
Q Consensus       205 ~~~-~~~~lv~E~~~~g~L~~~l~~~~-----------------------------------------------------  230 (511)
                      ... ...++|||||++|+|.+++....                                                     
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
T cd05103          81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD  160 (343)
T ss_pred             ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence            654 56789999999999999986421                                                     


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccc
Q 010432          231 -------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML  297 (511)
Q Consensus       231 -------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~  297 (511)
                                   ..+++..+..++.||+.||+|||+++   |+||||||+|||++                        
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~------------------------  213 (343)
T cd05103         161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS------------------------  213 (343)
T ss_pred             chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEc------------------------
Confidence                         13677888899999999999999988   99999999999998                        


Q ss_pred             cccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCchh
Q 010432          298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHN  376 (511)
Q Consensus       298 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~  376 (511)
                       ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.......  .
T Consensus       214 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~  290 (343)
T cd05103         214 -ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E  290 (343)
T ss_pred             -CCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--H
Confidence             467899999999987543322211222346778999999988899999999999999999997 899986532211  1


Q ss_pred             HHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ....    ......          ...+...+..+.+++.+||+.||.+||++.+|+++|+.+
T Consensus       291 ~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         291 FCRR----LKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             HHHH----HhccCC----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1110    000000          000111245789999999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-42  Score=323.66  Aligned_cols=249  Identities=28%  Similarity=0.366  Sum_probs=207.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHH---HHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~---~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      -++|..+++||+|.||+|-+++-+.         +++.||||++++.......+   -+.|-++|+..+||.+..|...|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKa---------t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF  237 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKA---------TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF  237 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecc---------cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh
Confidence            3578888999999999999998765         88999999999876554443   46799999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      +..+.+|+||||..||.|.-+|.+ ...+++...+.+...|+.||.|||+++   ||+||||.+|+||+           
T Consensus       238 Qt~drlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLD-----------  302 (516)
T KOG0690|consen  238 QTQDRLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLD-----------  302 (516)
T ss_pred             ccCceEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheec-----------
Confidence            999999999999999999998854 457888889999999999999999988   99999999999999           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    +++++||+||||++.......  ...++||||.|+|||++....|+.++|+|.+||++|||++|+.
T Consensus       303 --------------kDGHIKitDFGLCKE~I~~g~--t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRL  366 (516)
T KOG0690|consen  303 --------------KDGHIKITDFGLCKEEIKYGD--TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRL  366 (516)
T ss_pred             --------------cCCceEeeecccchhcccccc--eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccC
Confidence                          599999999999986443222  2446899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVE  434 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~  434 (511)
                      ||+.........++..      +            .-.|+...+++++.|+..+|.+||.+|.     .+.||.+
T Consensus       367 PFyn~dh~kLFeLIl~------e------------d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  367 PFYNKDHEKLFELILM------E------------DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             cccccchhHHHHHHHh------h------------hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence            9986543322222111      0            1123344467899999999999999995     3556654

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=5.4e-41  Score=336.01  Aligned_cols=268  Identities=22%  Similarity=0.328  Sum_probs=191.2

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe--CCeEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE--DDQRL  211 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~--~~~~~  211 (511)
                      ..+||+|+||+||+|+++..       .+++.||+|.+.....  ...+.+|+.+|++++||||+++++++..  +...|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~-------~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   76 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDG-------KDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVW   76 (317)
T ss_pred             ccccccCCCeEEEEEEEccC-------CCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEE
Confidence            45899999999999987542       1467899999975532  2457899999999999999999998864  45688


Q ss_pred             EEEEccCCCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          212 LVYEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +||||+ +++|.+++...        ...+++..+..++.||+.||.|||+++   |+||||||+|||+.....      
T Consensus        77 lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~------  146 (317)
T cd07868          77 LLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGP------  146 (317)
T ss_pred             EEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCC------
Confidence            999999 46888887421        235888999999999999999999998   999999999999953211      


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHh
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ellt  361 (511)
                                     ..+.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus       147 ---------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~  211 (317)
T cd07868         147 ---------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT  211 (317)
T ss_pred             ---------------CcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHh
Confidence                           3567999999999875432211 11234578999999999876 458999999999999999999


Q ss_pred             CCCCCCCCCCCCch------hHHHhhhhhhc--------------cccccccccCCc------cCC---CCCHHHHHHHH
Q 010432          362 GRRSMDKNRPNGEH------NLVEWARPHLG--------------ERRRFYRLIDPR------LEG---HFSIKGAQKAA  412 (511)
Q Consensus       362 g~~pf~~~~~~~~~------~~~~~~~~~~~--------------~~~~~~~~~~~~------~~~---~~~~~~~~~~~  412 (511)
                      |++||.........      .........+.              ............      +..   ......+..+.
T Consensus       212 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (317)
T cd07868         212 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF  291 (317)
T ss_pred             CCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHH
Confidence            99999754332110      00000000000              000000000000      000   00001134678


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHH
Q 010432          413 QLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       413 ~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +||.+||+.||.+|||+.|++++
T Consensus       292 dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         292 HLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             HHHHHHhccCcccCCCHHHHhcC
Confidence            99999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.5e-41  Score=328.53  Aligned_cols=258  Identities=25%  Similarity=0.347  Sum_probs=206.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|.+..         ++..||||.+.....   ....++.+|+.+++.++|+||+++++++.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~---------~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   72 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLL---------DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI   72 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecC---------CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE
Confidence            468888999999999999999765         577999998865332   22346889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .++..++||||+++++|.+++..   ....+++..++.++.||+.||.|||+++   |+|+||||+|||++         
T Consensus        73 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~---------  140 (267)
T cd08229          73 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFIT---------  140 (267)
T ss_pred             eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEc---------
Confidence            99999999999999999998853   2346899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.++|+|||++.........  .....|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus       141 ----------------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g  202 (267)
T cd08229         141 ----------------ATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL  202 (267)
T ss_pred             ----------------CCCCEEECcchhhhccccCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhC
Confidence                            4678999999998865443221  2235689999999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ..||....... .......          .....   ........+..+.+|+.+||+.||.+|||+.+|++.++++
T Consensus       203 ~~p~~~~~~~~-~~~~~~~----------~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         203 QSPFYGDKMNL-YSLCKKI----------EQCDY---PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCCcccccchH-HHHhhhh----------hcCCC---CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            99996532210 1111000          00000   1111123467899999999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=3.8e-41  Score=334.00  Aligned_cols=251  Identities=24%  Similarity=0.340  Sum_probs=204.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|++.+.||+|+||.||+|.+..         ++..||+|.+..........+.+|+.+++.++|+||+++++++..+.
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~   90 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVA---------TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECC---------CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence            589999999999999999998765         57799999998766555567889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++               
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~---------------  150 (296)
T cd06654          91 ELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLG---------------  150 (296)
T ss_pred             EEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEc---------------
Confidence            99999999999999999854  35788999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                +++.+||+|||++.........  .....|++.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus       151 ----------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~  218 (296)
T cd06654         151 ----------MDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (296)
T ss_pred             ----------CCCCEEECccccchhccccccc--cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence                      4678999999998865432211  2234689999999999888899999999999999999999999975


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......  +.....    .         .......+...+..+.+|+.+||..||++||++.+|+++
T Consensus       219 ~~~~~~--~~~~~~----~---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         219 ENPLRA--LYLIAT----N---------GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CCHHHh--HHHHhc----C---------CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            432111  100000    0         000001122335678999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=3.2e-41  Score=331.91  Aligned_cols=252  Identities=25%  Similarity=0.408  Sum_probs=202.1

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      |++.+.||+|+||.||+|.+..         ++..+|+|.+..........+.+|+.+++.++|+||+++++++..++..
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~   77 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKE---------TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNL   77 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECC---------CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEE
Confidence            6777889999999999998865         5778999999765544456788999999999999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++++|..++......+++..+..++.||+.||.|||+.+   |+||||||+|||++                 
T Consensus        78 ~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~-----------------  137 (282)
T cd06643          78 WILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFT-----------------  137 (282)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEc-----------------
Confidence            9999999999999988665567999999999999999999999988   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHhCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                              .++.+||+|||++........  ......||..|+|||++.     +..++.++|||||||++|||++|+.|
T Consensus       138 --------~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p  207 (282)
T cd06643         138 --------LDGDIKLADFGVSAKNTRTIQ--RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPP  207 (282)
T ss_pred             --------cCCCEEEcccccccccccccc--ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCC
Confidence                    467899999999976533211  123356899999999884     45678899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |.......  ........           ..+.+  ..+...+..+.+||.+||+.||.+||++.+++++-
T Consensus       208 ~~~~~~~~--~~~~~~~~-----------~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         208 HHELNPMR--VLLKIAKS-----------EPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             ccccCHHH--HHHHHhhc-----------CCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence            97543211  11111000           00000  11122356789999999999999999999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3e-41  Score=332.85  Aligned_cols=251  Identities=30%  Similarity=0.407  Sum_probs=199.1

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      |+..+.||+|+||+||+|.+..         +++.||+|.+......   ....+.+|+.+|++++|+||+.+++++..+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~   72 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRA---------TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK   72 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECC---------CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC
Confidence            6677889999999999999875         6779999999754322   223477899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+   |+||||||+|||++             
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~-------------  136 (285)
T cd05632          73 DALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLD-------------  136 (285)
T ss_pred             CEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEC-------------
Confidence            9999999999999999888653 346999999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  ++..+||+|||++........   .....|+..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       137 ------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~  201 (285)
T cd05632         137 ------------DYGHIRISDLGLAVKIPEGES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPF  201 (285)
T ss_pred             ------------CCCCEEEecCCcceecCCCCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCC
Confidence                        367899999999976543221   22357899999999999889999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      ...........   ........           ...+....+..+.+|+.+||+.||.+||+     +.+++.+
T Consensus       202 ~~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         202 RGRKEKVKREE---VDRRVLET-----------EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             CCCCHHHHHHH---HHHhhhcc-----------ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            75432111110   00000000           01112223567889999999999999999     5566553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=7.2e-41  Score=326.07  Aligned_cols=258  Identities=24%  Similarity=0.361  Sum_probs=207.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|.+..         +|+.||+|.++....   .....+.+|++++++++|+||+++++++.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~   72 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLL---------DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI   72 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcC---------CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee
Confidence            578999999999999999999865         577999999864322   22456889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ..+..++||||+++|+|..++..   ....+++..++.++.||+.||.|||+.+   |+|+||||+||+++         
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~---------  140 (267)
T cd08224          73 ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFIT---------  140 (267)
T ss_pred             cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEEC---------
Confidence            99999999999999999998853   2345889999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.++|+|||++.........  .....|+..|+|||++.+..++.++|||||||++|+|++|
T Consensus       141 ----------------~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g  202 (267)
T cd08224         141 ----------------ATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL  202 (267)
T ss_pred             ----------------CCCcEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHC
Confidence                            4778999999998765432211  2234689999999999988999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS-IKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      +.||...... ...+......              ......+ ...+..+.++|.+||..+|++||++.+|++.|+.+.
T Consensus       203 ~~p~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         203 QSPFYGDKMN-LYSLCKKIEK--------------CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CCCcccCCcc-HHHHHhhhhc--------------CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            9999644311 0011110000              0001111 134567899999999999999999999999997653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.3e-41  Score=342.72  Aligned_cols=256  Identities=21%  Similarity=0.257  Sum_probs=198.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||++++..         +++.||||++.....   .....+.+|+.++..++|+||+++++++.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~   71 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKH---------TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ   71 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            478999999999999999999875         677999999975321   12234778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..||||||+++|+|.+++......+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~------------  136 (331)
T cd05624          72 DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLD------------  136 (331)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEc------------
Confidence            999999999999999999999765567899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----CCCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DIwSlGvil~ell  360 (511)
                                   .++.+||+|||+++........ ......||+.|+|||++.+     ..++.++|||||||+||||+
T Consensus       137 -------------~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell  202 (331)
T cd05624         137 -------------MNGHIRLADFGSCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML  202 (331)
T ss_pred             -------------CCCCEEEEeccceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhh
Confidence                         4778999999999865443221 1233579999999999875     56889999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~eil~~  435 (511)
                      +|+.||.......   ....   .......+      .+... ....+..+.+|+.+||..++.+  |+++.+++++
T Consensus       203 ~g~~Pf~~~~~~~---~~~~---i~~~~~~~------~~p~~-~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         203 YGETPFYAESLVE---TYGK---IMNHEERF------QFPSH-ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             hCCCCccCCCHHH---HHHH---HHcCCCcc------cCCCc-cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            9999997543211   1100   00000000      00000 0123577899999999876544  4578888765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=2e-41  Score=338.87  Aligned_cols=267  Identities=25%  Similarity=0.403  Sum_probs=205.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ...+|.+.+.||+|+||.||+|++.....  ........||+|.++.... .....+.+|+.+++++ +||||+++++++
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~--~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDK--SRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCC--ccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            34678899999999999999998643111  1112456899999875432 2235688999999999 699999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      ...+..++||||+++|+|.+++....               ..+++..++.++.||+.||.|||+++   |+||||||+|
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~N  164 (314)
T cd05099          88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARN  164 (314)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecccccee
Confidence            99899999999999999999996431               34788899999999999999999988   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         +++.+||+|||+++...............++..|||||++.+..++.++||
T Consensus       165 ill~-------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (314)
T cd05099         165 VLVT-------------------------EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV  219 (314)
T ss_pred             EEEc-------------------------CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchh
Confidence            9998                         477899999999987644322111122234568999999998899999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |..||.......   +.....    ...          ....+..++..+.+|+.+||+.||++||+
T Consensus       220 wslG~~l~el~~~g~~p~~~~~~~~---~~~~~~----~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps  282 (314)
T cd05099         220 WSFGILMWEIFTLGGSPYPGIPVEE---LFKLLR----EGH----------RMDKPSNCTHELYMLMRECWHAVPTQRPT  282 (314)
T ss_pred             hHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH----cCC----------CCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            999999999999 888886543211   111111    000          01112223567889999999999999999


Q ss_pred             HHHHHHHhcCCC
Q 010432          429 MSEVVEALKPLP  440 (511)
Q Consensus       429 ~~eil~~L~~l~  440 (511)
                      +.++++.|+.+.
T Consensus       283 ~~~ll~~l~~~~  294 (314)
T cd05099         283 FKQLVEALDKVL  294 (314)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=4.2e-41  Score=328.46  Aligned_cols=257  Identities=22%  Similarity=0.334  Sum_probs=202.7

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++++.....||+|+||.||+|.+..         ++..||+|.+........+.+.+|+.++++++|+||+++++++.
T Consensus         5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   75 (268)
T cd06624           5 YEYDENGERVVLGKGTYGIVYAARDLS---------TQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS   75 (268)
T ss_pred             cccccCCceEEEecCCceEEEEeEecC---------CCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec
Confidence            344556666789999999999998765         56789999988765555567889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPL--PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l--~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      .++..++||||+++++|.+++......+  ++..+..++.||+.||.|||+++   |+||||||+||+++.         
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~---------  143 (268)
T cd06624          76 ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNT---------  143 (268)
T ss_pred             cCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcC---------
Confidence            9999999999999999999997654445  78888999999999999999988   999999999999973         


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC--CCCccccchhHHHHHHHHHh
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DIwSlGvil~ellt  361 (511)
                                     +...++|+|||++.........  .....|+..|+|||++...  .++.++|||||||++|+|++
T Consensus       144 ---------------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~  206 (268)
T cd06624         144 ---------------YSGVVKISDFGTSKRLAGINPC--TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT  206 (268)
T ss_pred             ---------------CCCeEEEecchhheecccCCCc--cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh
Confidence                           3567999999999765432211  2234589999999998654  37899999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |+.||........   ..+.....            .....++......+.+|+.+||+.+|.+||++.+++.+
T Consensus       207 g~~p~~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         207 GKPPFIELGEPQA---AMFKVGMF------------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             CCCCCccccChhh---hHhhhhhh------------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            9999964322110   00000000            00111223345778999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.6e-41  Score=329.60  Aligned_cols=254  Identities=24%  Similarity=0.361  Sum_probs=201.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|.+.+.||+|+||.||+|++..         +++.||+|.++.........+.+|+.+++.++||||+++++++...+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~   79 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVN---------TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD   79 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcC---------CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Confidence            467778899999999999998865         57799999998665444456788999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|.+++... ..+++..++.++.|++.||.|||+++   |+|+||||+|||++               
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~---------------  140 (267)
T cd06645          80 KLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLT---------------  140 (267)
T ss_pred             EEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC---------------
Confidence            999999999999999988544 47899999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                .++.+||+|||++........  ......|+..|+|||++.   ...++.++|||||||++|+|++|..|
T Consensus       141 ----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p  208 (267)
T cd06645         141 ----------DNGHVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPP  208 (267)
T ss_pred             ----------CCCCEEECcceeeeEccCccc--ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence                      367799999999876543211  123357899999999874   45688999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |....+....  ......         ....+....  ....+..+.+|+.+||+.||++||++.+|+++
T Consensus       209 ~~~~~~~~~~--~~~~~~---------~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         209 MFDLHPMRAL--FLMTKS---------NFQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             cccccchhhH--Hhhhcc---------CCCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            8654321110  000000         000010100  01234578899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=5.5e-41  Score=331.96  Aligned_cols=253  Identities=26%  Similarity=0.384  Sum_probs=203.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +.|++++.||.|+||.||+|++..         ++..||+|.+..........+.+|+.+++.++|+||+++++++..+.
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG   82 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECC---------CCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence            578999999999999999998865         57799999998765555567889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|..++.+....+++..+..++.||+.||.|||+++   |+||||||+|||++               
T Consensus        83 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~---------------  144 (292)
T cd06644          83 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLT---------------  144 (292)
T ss_pred             eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEc---------------
Confidence            999999999999999888665667899999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHhCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                .++.+||+|||++........  ......|+..|+|||++.     ...++.++|||||||++|||++|.
T Consensus       145 ----------~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~  212 (292)
T cd06644         145 ----------LDGDIKLADFGVSAKNVKTLQ--RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE  212 (292)
T ss_pred             ----------CCCCEEEccCccceecccccc--ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCC
Confidence                      467899999999876433211  123356889999999885     345788999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .||.......  .......           ...+.  ...+...+.++.+||.+||+.||++||++.+++++
T Consensus       213 ~p~~~~~~~~--~~~~~~~-----------~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         213 PPHHELNPMR--VLLKIAK-----------SEPPT--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             CCCccccHHH--HHHHHhc-----------CCCcc--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            9996543211  1111100           00000  01112334678999999999999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=343.06  Aligned_cols=241  Identities=27%  Similarity=0.321  Sum_probs=187.2

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCC---CCCCcceEeeEEEeCCeE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDL---VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l---~H~nIv~l~~~~~~~~~~  210 (511)
                      ||+|+||+||+|++..         ++..||||++......   ....+..|..++..+   .||||+++++++...+..
T Consensus         1 lG~G~~g~Vy~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~   71 (330)
T cd05586           1 IGKGTFGQVYQVRKKD---------TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDL   71 (330)
T ss_pred             CCCCCceEEEEEEECC---------CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeE
Confidence            7999999999999875         6789999999653221   123455677777665   699999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      |+||||+++|+|..++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        72 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~-----------------  130 (330)
T cd05586          72 YLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLD-----------------  130 (330)
T ss_pred             EEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEEC-----------------
Confidence            9999999999999988653 46899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDKN  369 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~~~  369 (511)
                              .++.+||+|||+++........  ....+||+.|||||++.+. .++.++|||||||++|||++|+.||...
T Consensus       131 --------~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~  200 (330)
T cd05586         131 --------ATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE  200 (330)
T ss_pred             --------CCCCEEEecCCcCcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC
Confidence                    4778999999999764332221  2346799999999998754 5899999999999999999999999754


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHH
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL----MSEVVE  434 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs----~~eil~  434 (511)
                      ....   +....   ....        ..+..   ...+..+.+|+.+||+.||.+||+    +.++++
T Consensus       201 ~~~~---~~~~i---~~~~--------~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         201 DTQQ---MYRNI---AFGK--------VRFPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             CHHH---HHHHH---HcCC--------CCCCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            3211   11000   0000        00110   112467889999999999999995    555554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3.1e-41  Score=326.83  Aligned_cols=250  Identities=22%  Similarity=0.302  Sum_probs=202.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +|++.+.||+|+||.||++.+..         ++..||+|.++... ....+.+.+|+.+++.++|+||+++++++..++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   71 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVN---------SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG   71 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcC---------CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC
Confidence            47888999999999999998865         67799999986543 223456788999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++||||+++|+|.+++... ...++...++.++.||+.||.|||+++   |+|+||||+|||++              
T Consensus        72 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~--------------  134 (255)
T cd08219          72 HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLT--------------  134 (255)
T ss_pred             EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEC--------------
Confidence            999999999999999988643 445889999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 +++.++|+|||++........  ......|++.|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus       135 -----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~  201 (255)
T cd08219         135 -----------QNGKVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQ  201 (255)
T ss_pred             -----------CCCcEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCC
Confidence                       477899999999986544222  1233568999999999988889999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....   .......   ..  .         ....+...+..+.+|+.+||+.||++||++.+|+..
T Consensus       202 ~~~~~---~~~~~~~---~~--~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         202 ANSWK---NLILKVC---QG--S---------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCHH---HHHHHHh---cC--C---------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            53221   1110000   00  0         001122235678999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.3e-41  Score=330.71  Aligned_cols=253  Identities=27%  Similarity=0.378  Sum_probs=199.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      +.+.|++.+.||+|+||.||+|.+..         +++.||+|++.... .....+.+|+.++.++ +|+||+++++++.
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~---------~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   73 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVK---------TGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI   73 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcC---------CCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEe
Confidence            45678888999999999999998865         67799999997653 3345688999999998 7999999999987


Q ss_pred             eC------CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          206 ED------DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       206 ~~------~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ..      ...++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+++   |+||||||+||+++     
T Consensus        74 ~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~-----  145 (272)
T cd06637          74 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLT-----  145 (272)
T ss_pred             ecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEEC-----
Confidence            53      4689999999999999998753 356899999999999999999999988   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFG  353 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlG  353 (511)
                                          ++..+||+|||++........  ......|+..|+|||++.     ...++.++||||||
T Consensus       146 --------------------~~~~~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  203 (272)
T cd06637         146 --------------------ENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG  203 (272)
T ss_pred             --------------------CCCCEEEccCCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence                                477899999999986543221  123357899999999986     34688899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      |++|||++|..||........     ...  ...      ...   ........+..+.+|+.+||..||.+||++.+++
T Consensus       204 v~l~el~~g~~p~~~~~~~~~-----~~~--~~~------~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il  267 (272)
T cd06637         204 ITAIEMAEGAPPLCDMHPMRA-----LFL--IPR------NPA---PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLM  267 (272)
T ss_pred             HHHHHHHhCCCCccccCHHHH-----HHH--Hhc------CCC---CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            999999999999964332111     000  000      000   0001112346789999999999999999999998


Q ss_pred             HH
Q 010432          434 EA  435 (511)
Q Consensus       434 ~~  435 (511)
                      .+
T Consensus       268 ~~  269 (272)
T cd06637         268 KH  269 (272)
T ss_pred             hC
Confidence            74

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=3.5e-41  Score=334.92  Aligned_cols=268  Identities=22%  Similarity=0.310  Sum_probs=202.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||.||+|++..         ++..||+|.+..... .....+.+|+.++++++|+||+++++++..+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~   76 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKL---------TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE   76 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcC---------CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC
Confidence            578999999999999999998865         677999999975432 2234678899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+. ++|.+++......+++..+..++.||+.||.|||+++   |+|+||||+|||++              
T Consensus        77 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~--------------  138 (301)
T cd07873          77 KSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLIN--------------  138 (301)
T ss_pred             CeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEEC--------------
Confidence            99999999996 6999998766667899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||++.........  .....+++.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus       139 -----------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f  205 (301)
T cd07873         139 -----------ERGELKLADFGLARAKSIPTKT--YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLF  205 (301)
T ss_pred             -----------CCCcEEECcCcchhccCCCCCc--ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCC
Confidence                       4778999999999865432221  223457899999998865 45788999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhh--------hhccccccccccCCccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARP--------HLGERRRFYRLIDPRLEG----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ...........+.....        .......+.....+....    ......+..+.+||.+||+.||.+|||+.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         206 PGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             CCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            76533211110000000        000000000000000000    011123567899999999999999999999998


Q ss_pred             Hh
Q 010432          435 AL  436 (511)
Q Consensus       435 ~L  436 (511)
                      +-
T Consensus       286 h~  287 (301)
T cd07873         286 HP  287 (301)
T ss_pred             Cc
Confidence            54

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.4e-41  Score=345.81  Aligned_cols=265  Identities=23%  Similarity=0.288  Sum_probs=198.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+..         +++.||||++.....  .....+.+|+.+++.++|+||+++++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   85 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAV---------LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF   85 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecC---------CCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeee
Confidence            45789999999999999999998765         677999999975432  2235678999999999999999999988


Q ss_pred             EeC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          205 IED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       205 ~~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ...      ...++||||++ ++|.+++..   .+++..+..++.||+.||.|||+++   |+||||||+|||++     
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~-----  153 (355)
T cd07874          86 TPQKSLEEFQDVYLVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK-----  153 (355)
T ss_pred             eccccccccceeEEEhhhhc-ccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEC-----
Confidence            643      35799999995 477777643   4788889999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                          .++.+||+|||+++.......   .....||..|+|||++.+..++.++|||||||++||
T Consensus       154 --------------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e  210 (355)
T cd07874         154 --------------------SDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  210 (355)
T ss_pred             --------------------CCCCEEEeeCcccccCCCccc---cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence                                477899999999986543221   233578999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhH-HHh---------------hhhhhcccccccccc-----CCcc---CCCCCHHHHHHHHHH
Q 010432          359 MLTGRRSMDKNRPNGEHNL-VEW---------------ARPHLGERRRFYRLI-----DPRL---EGHFSIKGAQKAAQL  414 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~-~~~---------------~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~L  414 (511)
                      |++|+.||.+......... ...               .............+.     ...+   ........+..+.+|
T Consensus       211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  290 (355)
T cd07874         211 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL  290 (355)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHH
Confidence            9999999976432111000 000               000000000000000     0000   000111224678999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 010432          415 AAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+||+.||.+|||+.|++++
T Consensus       291 i~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         291 LSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHHhcCCchhcCCHHHHhcC
Confidence            999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-43  Score=360.06  Aligned_cols=260  Identities=26%  Similarity=0.445  Sum_probs=219.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ...+.++||.|.||.|++|+++..++      ....||||.++.... +.+.+|+.|+.||.+++||||++|.|+.....
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgk------re~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGK------REITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK  703 (996)
T ss_pred             heEEEEEEecccccceecccccCCCC------cceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence            44677899999999999999987544      456899999997644 34567999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .++||.|||++|+|..||+.+.+.+.+.+..-+++.||.||.||-+.+   +|||||.++|||++.              
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNs--------------  766 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNS--------------  766 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeecc--------------
Confidence            999999999999999999988888999999999999999999999999   999999999999994              


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccc--cccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMG--TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~G--t~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                 +..+|++||||++.+.++... ..++..|  +++|.|||.+...+++.++|||||||+|||.++ |..|
T Consensus       767 -----------nLvCKVsDFGLSRvledd~~~-~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERP  834 (996)
T KOG0196|consen  767 -----------NLVCKVSDFGLSRVLEDDPEA-AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP  834 (996)
T ss_pred             -----------ceEEEeccccceeecccCCCc-cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCc
Confidence                       888999999999987665422 2222222  579999999999999999999999999999886 8899


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |......+..                 ..+...++..-+.+++..+.+||..||++|-.+||.|.+|+.+|+++..
T Consensus       835 YWdmSNQdVI-----------------kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  835 YWDMSNQDVI-----------------KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             ccccchHHHH-----------------HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            8755432211                 1222333444566788999999999999999999999999999988753

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=6e-41  Score=324.89  Aligned_cols=252  Identities=34%  Similarity=0.516  Sum_probs=205.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.||+|+||.||+|.+....      .++..||||.+....... ...+.+|+.++..++|+||+++++++......++|
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   74 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKD------GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLV   74 (262)
T ss_pred             CccccCCceEEEEEEEecCC------CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEE
Confidence            46999999999999986521      136789999998765433 46788999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          214 YEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      |||+++++|.+++...        ...+++..+..++.|++.||+|||+++   |+||||||+|||++            
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~------------  139 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVG------------  139 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEEC------------
Confidence            9999999999999765        467899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   +++.+||+|||.+................++..|+|||.+....++.++|||||||++|||++ |..
T Consensus       140 -------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  206 (262)
T cd00192         140 -------------EDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT  206 (262)
T ss_pred             -------------CCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCC
Confidence                         468899999999988765432222334567899999999988899999999999999999999 699


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ||......   .+.....    .          ......+...+.++.+++.+||+.||.+||++.+++++|+
T Consensus       207 p~~~~~~~---~~~~~~~----~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         207 PYPGLSNE---EVLEYLR----K----------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCCCCCHH---HHHHHHH----c----------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            99765221   1111111    0          0011122233578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.4e-41  Score=370.94  Aligned_cols=275  Identities=24%  Similarity=0.323  Sum_probs=204.1

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceE
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l  200 (511)
                      +......+|++++.||+|+||+||+|++..         ++..||+|++......  ....|.+|+.+|.+|+|||||++
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~---------tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl   77 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKR---------TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRY   77 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECC---------CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeE
Confidence            334456789999999999999999999875         6779999999765332  23568899999999999999999


Q ss_pred             eeEEEe--CCeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCeEecccCCCcEE
Q 010432          201 IGYCIE--DDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAE----RPVIYRDFKTSNIL  271 (511)
Q Consensus       201 ~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~----~~iiHrDLKp~NIL  271 (511)
                      +++|..  ...+|||||||++|+|.++|...   ...+++..++.|+.||+.||.|||..+.    .+||||||||+|||
T Consensus        78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL  157 (1021)
T PTZ00266         78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF  157 (1021)
T ss_pred             EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence            998865  45689999999999999998642   3469999999999999999999998431    34999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc--CCCCccccc
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDV  349 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DI  349 (511)
                      |+..... +.+.       ............+||+|||++........   .....||+.|+|||++.+  ..++.++||
T Consensus       158 L~s~~~~-lg~i-------~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDV  226 (1021)
T PTZ00266        158 LSTGIRH-IGKI-------TAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDM  226 (1021)
T ss_pred             eecCccc-cccc-------cccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHH
Confidence            9742100 0000       00000011245689999999987643321   233579999999999864  458999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      ||||||||||++|..||......  ..+...    +...        +.+..   ...+..+.+||..||+.+|.+||++
T Consensus       227 WSLG~ILYELLTGk~PF~~~~~~--~qli~~----lk~~--------p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa  289 (1021)
T PTZ00266        227 WALGCIIYELCSGKTPFHKANNF--SQLISE----LKRG--------PDLPI---KGKSKELNILIKNLLNLSAKERPSA  289 (1021)
T ss_pred             HHHHHHHHHHHHCCCCCCcCCcH--HHHHHH----HhcC--------CCCCc---CCCCHHHHHHHHHHhcCChhHCcCH
Confidence            99999999999999999753321  111111    1000        00000   1124678999999999999999999


Q ss_pred             HHHHH
Q 010432          430 SEVVE  434 (511)
Q Consensus       430 ~eil~  434 (511)
                      .++|.
T Consensus       290 ~QlL~  294 (1021)
T PTZ00266        290 LQCLG  294 (1021)
T ss_pred             HHHhc
Confidence            99985

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.6e-41  Score=337.83  Aligned_cols=258  Identities=26%  Similarity=0.426  Sum_probs=200.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|.++.++       ....+|+|.++.... .....+.+|+.++.++ +|+||+++++++..
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~-------~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~   79 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH   79 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCC-------ceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC
Confidence            57888999999999999999986521       123568887764322 2335688899999999 89999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      ++..++||||+++|+|.+++....               ..+++..++.++.||+.||+|||+++   |+||||||+|||
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nil  156 (303)
T cd05088          80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNIL  156 (303)
T ss_pred             CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEE
Confidence            999999999999999999996432               25788999999999999999999988   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      ++                         .+..+||+|||++........   .....++..|+|||++.+..++.++||||
T Consensus       157 i~-------------------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  208 (303)
T cd05088         157 VG-------------------------ENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWS  208 (303)
T ss_pred             ec-------------------------CCCcEEeCccccCcccchhhh---cccCCCcccccCHHHHhccCCcccccchh
Confidence            98                         467899999999974321111   11123467899999998888999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          352 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       352 lGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |||++|||+| |..||.......   ......    .          ......+...+..+.+|+.+||+.+|++||++.
T Consensus       209 lG~il~ellt~g~~p~~~~~~~~---~~~~~~----~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  271 (303)
T cd05088         209 YGVLLWEIVSLGGTPYCGMTCAE---LYEKLP----Q----------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA  271 (303)
T ss_pred             hhhHHHHHHhcCCCCcccCChHH---HHHHHh----c----------CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            9999999998 999996543211   111110    0          001111112346789999999999999999999


Q ss_pred             HHHHHhcCCCC
Q 010432          431 EVVEALKPLPN  441 (511)
Q Consensus       431 eil~~L~~l~~  441 (511)
                      ++++.|+.+..
T Consensus       272 ~il~~l~~~~~  282 (303)
T cd05088         272 QILVSLNRMLE  282 (303)
T ss_pred             HHHHHHHHHHH
Confidence            99999876543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.7e-41  Score=327.36  Aligned_cols=253  Identities=27%  Similarity=0.413  Sum_probs=201.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|.+..          +..||+|.+..... ....+.+|+.++++++|+||+++++++. .
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~----------~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~   72 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNG----------NTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-E   72 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecC----------CceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-C
Confidence            4578899999999999999997653          45799999976543 3467899999999999999999999875 4


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ...++||||+++++|.+++... ...+++..++.++.|++.||.|||+++   |+||||||+|||++             
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~-------------  136 (260)
T cd05070          73 EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVG-------------  136 (260)
T ss_pred             CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEe-------------
Confidence            5689999999999999998653 345899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  ++..++|+|||++......... ......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       137 ------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p  203 (260)
T cd05070         137 ------------DGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             ------------CCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCC
Confidence                        4678999999999865443211 1122345678999999988889999999999999999999 8899


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      |......   ........              ......+...+..+.+|+.+||..||++|||+.++++.|+.
T Consensus       204 ~~~~~~~---~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         204 YPGMNNR---EVLEQVER--------------GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCHH---HHHHHHHc--------------CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9653221   11111100              00111122335679999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.3e-41  Score=326.44  Aligned_cols=257  Identities=22%  Similarity=0.359  Sum_probs=194.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCC---ccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAP---VKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~---~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      +.||+|+||.||+|+........   ........||+|.+..........+.+|+.++..++||||+++++++..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            36899999999999865321100   011234578999987654444456888999999999999999999999998999


Q ss_pred             EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccc
Q 010432          212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL  291 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~  291 (511)
                      +||||+++|+|..++......+++..++.++.||+.||+|||+++   |+||||||+|||++..+...            
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~------------  145 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDG------------  145 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccC------------
Confidence            999999999999988766667899999999999999999999988   99999999999997422100            


Q ss_pred             cccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHHH-hCCCCCCCC
Q 010432          292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML-TGRRSMDKN  369 (511)
Q Consensus       292 ~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~ell-tg~~pf~~~  369 (511)
                            .....+|++|||++......      ....|+..|+|||++. +..++.++|||||||++|||+ +|..||...
T Consensus       146 ------~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         146 ------ECGPFIKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             ------CCCceeEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence                  01234899999998765332      2245788999999886 567899999999999999998 588887643


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .......       ....   .....         ......+.+||.+||+.||.+||++.+|++.|+
T Consensus       214 ~~~~~~~-------~~~~---~~~~~---------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         214 TLAEKER-------FYEG---QCMLV---------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             chhHHHH-------HHhc---CccCC---------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            2211100       0000   00000         112467899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=2.6e-41  Score=332.04  Aligned_cols=264  Identities=26%  Similarity=0.409  Sum_probs=207.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|.+.+.||+|+||.||+|.+....     ..++..||+|++..... .....+.+|+.+|++++|+||+++++++.
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~-----~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~   78 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEK-----PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI   78 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCC-----CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            3568899999999999999999986521     12467899999875432 22356889999999999999999999877


Q ss_pred             e-CCeEEEEEEccCCCCHHHHHhhCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          206 E-DDQRLLVYEFMPRGSLENHLFRRS-------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       206 ~-~~~~~lv~E~~~~g~L~~~l~~~~-------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      . +...++++||+++|+|.+++....       ..+++..++.++.||+.||+|||+++   |+||||||+|||++    
T Consensus        79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~----  151 (280)
T cd05043          79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVID----  151 (280)
T ss_pred             cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEc----
Confidence            6 567899999999999999986432       45889999999999999999999988   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|
T Consensus       152 ---------------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~  210 (280)
T cd05043         152 ---------------------EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLW  210 (280)
T ss_pred             ---------------------CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHH
Confidence                                 46789999999998764433222223345678899999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          358 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       358 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |+++ |+.||......   .+..+...    ..          .......++..+.+++.+||..||++||++.++++.|
T Consensus       211 el~~~g~~p~~~~~~~---~~~~~~~~----~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l  273 (280)
T cd05043         211 ELMTLGQTPYVEIDPF---EMAAYLKD----GY----------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCL  273 (280)
T ss_pred             HHhcCCCCCcCcCCHH---HHHHHHHc----CC----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence            9999 99999754321   11111111    00          0011112356789999999999999999999999999


Q ss_pred             cCCC
Q 010432          437 KPLP  440 (511)
Q Consensus       437 ~~l~  440 (511)
                      +.+.
T Consensus       274 ~~~~  277 (280)
T cd05043         274 TDFH  277 (280)
T ss_pred             HHHH
Confidence            7653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.5e-41  Score=341.10  Aligned_cols=268  Identities=27%  Similarity=0.399  Sum_probs=207.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ...+|++.+.||+|+||.||+|.+......  ....+..||+|.++.... .....+.+|+.+++++ +|+||+++++++
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKD--KPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC   87 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCc--cCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence            345789999999999999999987542211  112345799998875432 2235788999999999 899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      ...+..++||||+++|+|.+++....               ..+++..++.++.||+.||.|||+++   |+||||||+|
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~N  164 (334)
T cd05100          88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARN  164 (334)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccce
Confidence            99999999999999999999986432               24778889999999999999999988   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         ++..+||+|||+++...............++..|+|||++.+..++.++||
T Consensus       165 ill~-------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (334)
T cd05100         165 VLVT-------------------------EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  219 (334)
T ss_pred             EEEc-------------------------CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhh
Confidence            9998                         467899999999987654332222222345678999999999999999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |..||.......   ......    ..          .....+...+..+.+|+.+||+.+|.+||+
T Consensus       220 ~slG~il~el~~~g~~p~~~~~~~~---~~~~~~----~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps  282 (334)
T cd05100         220 WSFGVLLWEIFTLGGSPYPGIPVEE---LFKLLK----EG----------HRMDKPANCTHELYMIMRECWHAVPSQRPT  282 (334)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH----cC----------CCCCCCCCCCHHHHHHHHHHcccChhhCcC
Confidence            999999999998 888886542211   111100    00          011112223567899999999999999999


Q ss_pred             HHHHHHHhcCCCC
Q 010432          429 MSEVVEALKPLPN  441 (511)
Q Consensus       429 ~~eil~~L~~l~~  441 (511)
                      +.+|++.|+.+..
T Consensus       283 ~~ell~~l~~~~~  295 (334)
T cd05100         283 FKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=5.2e-41  Score=325.54  Aligned_cols=248  Identities=27%  Similarity=0.436  Sum_probs=199.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEE-eC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI-ED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~-~~  207 (511)
                      .+|.+.+.||+|+||.||++..           .|..||+|.++...  ..+.+.+|+.++++++|+||+++++++. .+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-----------~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-----------RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK   72 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-----------cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC
Confidence            4788899999999999999976           35689999987543  2356889999999999999999999765 45


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++.... ..+++..++.++.||+.||+|||+++   |+||||||+|||++             
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~-------------  136 (256)
T cd05082          73 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVS-------------  136 (256)
T ss_pred             CceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEc-------------
Confidence            67899999999999999997543 34889999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  +++.+||+|||+++......     ....++..|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus       137 ------------~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p  199 (256)
T cd05082         137 ------------EDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  199 (256)
T ss_pred             ------------CCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCC
Confidence                        47789999999998654322     12345678999999988899999999999999999998 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.....   ..+.......              .........+..+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus       200 ~~~~~~---~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         200 YPRIPL---KDVVPRVEKG--------------YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CCCCCH---HHHHHHHhcC--------------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            864321   1111111100              01111223357889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-41  Score=331.77  Aligned_cols=254  Identities=26%  Similarity=0.406  Sum_probs=205.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||.|+||.||+|.+..         ++..||+|++..........+.+|+.++++++|+||+++++++..+
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKE---------TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE   74 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcC---------CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC
Confidence            3568899999999999999998865         5779999999766544556788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+++++|.+++......+++..++.++.|++.||.|||+++   |+|+||||+||+++              
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~--------------  137 (280)
T cd06611          75 NKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLT--------------  137 (280)
T ss_pred             CeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEC--------------
Confidence            9999999999999999998766667999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHhC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~elltg  362 (511)
                                 .++.++|+|||++.........  .....||+.|+|||++.     ...++.++|||||||++|||++|
T Consensus       138 -----------~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g  204 (280)
T cd06611         138 -----------LDGDVKLADFGVSAKNKSTLQK--RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQM  204 (280)
T ss_pred             -----------CCCCEEEccCccchhhcccccc--cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhC
Confidence                       4778999999998765432221  23356899999999875     34578899999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||.......  .+.....           ...+.+  ..+...+..+.+|+.+||+.+|.+||++.+|+++
T Consensus       205 ~~p~~~~~~~~--~~~~~~~-----------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         205 EPPHHELNPMR--VLLKILK-----------SEPPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCCcccCCHHH--HHHHHhc-----------CCCCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            99997543211  1111100           000000  1112235678999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.9e-41  Score=344.76  Aligned_cols=264  Identities=23%  Similarity=0.286  Sum_probs=198.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|.+..         +++.||||++.....  .....+.+|+.+++.++||||+++++++.
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~   93 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAI---------LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT   93 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECC---------CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeec
Confidence            4689999999999999999998865         577999999975422  23356789999999999999999999875


Q ss_pred             eC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 ED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..      ...|+||||+. ++|.+++..   .+++..+..++.||+.||+|||+++   |+||||||+|||++      
T Consensus        94 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~------  160 (364)
T cd07875          94 PQKSLEEFQDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK------  160 (364)
T ss_pred             ccccccccCeEEEEEeCCC-CCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEEC------
Confidence            43      35799999995 578777743   4788889999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+|||+++......   ......||..|+|||++.+..++.++|||||||+||||
T Consensus       161 -------------------~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  218 (364)
T cd07875         161 -------------------SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  218 (364)
T ss_pred             -------------------CCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHH
Confidence                               47789999999998654322   12335789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHh----------------hhhhhccccccc-----cccCCcc---CCCCCHHHHHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEW----------------ARPHLGERRRFY-----RLIDPRL---EGHFSIKGAQKAAQLA  415 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~Li  415 (511)
                      ++|+.||...........+..                ..........+.     .......   ...........+.+||
T Consensus       219 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll  298 (364)
T cd07875         219 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL  298 (364)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHH
Confidence            999999976542211110000                000000000000     0000000   0001111245789999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 010432          416 AHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       416 ~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+||+.||.+|||+.+++++
T Consensus       299 ~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         299 SKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHhcCcCcccCCCHHHHhcC
Confidence            99999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.7e-41  Score=324.93  Aligned_cols=253  Identities=30%  Similarity=0.477  Sum_probs=199.3

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ++||+|+||.||+|.+....      +++..||+|.+...... ..+.+.+|+.+++.++|+|||++++++. .+..++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v   73 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKS------GKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLV   73 (257)
T ss_pred             CccCccCceeEEEeEeeccC------CCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEE
Confidence            46999999999999875422      13478999999866543 3456889999999999999999999876 4568999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++|+|.+++.... .+++..++.++.|++.||+|||..+   |+|+||||+|||++                    
T Consensus        74 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~--------------------  129 (257)
T cd05060          74 MELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLV--------------------  129 (257)
T ss_pred             EEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEc--------------------
Confidence            99999999999996554 7899999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCccee-eeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRP  371 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~-~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~  371 (511)
                           .++.+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus       130 -----~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~  204 (257)
T cd05060         130 -----NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG  204 (257)
T ss_pred             -----CCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH
Confidence                 477899999999987644332211 111234578999999998899999999999999999998 9999965432


Q ss_pred             CCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                         ..+.......    .          ....+...+..+.+||.+||..+|++||++.+|++.|+.+.
T Consensus       205 ---~~~~~~~~~~----~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         205 ---AEVIAMLESG----E----------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             ---HHHHHHHHcC----C----------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence               1121111110    0          00111223567899999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-41  Score=324.33  Aligned_cols=255  Identities=25%  Similarity=0.367  Sum_probs=206.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++.+.||.|+||.||+|.+..         ++..||+|++..........+.+|+.++++++||||+++++++...+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   73 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIA---------TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD   73 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecC---------CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC
Confidence            578899999999999999998865         56789999998765555577899999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..+++|||+.+++|.+++......+++..+..++.|++.||.|||+++   |+|+||||+||+++               
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~---------------  135 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLT---------------  135 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEEC---------------
Confidence            999999999999999998766567999999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC---CCCccccchhHHHHHHHHHhCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~---~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                +++.+||+|||++........  ......|+..|+|||++.+.   .++.++|||||||++|||++|..|
T Consensus       136 ----------~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p  203 (262)
T cd06613         136 ----------EDGDVKLADFGVSAQLTATIA--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPP  203 (262)
T ss_pred             ----------CCCCEEECccccchhhhhhhh--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCC
Confidence                      467799999999986543221  12335688999999998776   889999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |........  ......      .   ....+  ........+..+.+|+.+||..+|.+||++.+|+.+
T Consensus       204 ~~~~~~~~~--~~~~~~------~---~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         204 MFDLHPMRA--LFLISK------S---NFPPP--KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             CCCCCHHHH--HHHHHh------c---cCCCc--cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            975432111  000000      0   00000  011123346779999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=4.4e-41  Score=326.82  Aligned_cols=254  Identities=26%  Similarity=0.430  Sum_probs=203.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|+++++||+|+||.||+|...          .++.||+|.+..... ....+.+|+.++++++|+||+++++++. 
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~----------~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-   71 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN----------GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-   71 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC----------CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-
Confidence            4567999999999999999999864          356899999976543 3467899999999999999999999864 


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+..++||||+.+|+|.+++... ...+++..++.++.|++.||+|||+.+   |+||||||+||+++            
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~------------  136 (260)
T cd05067          72 QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVS------------  136 (260)
T ss_pred             cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEc------------
Confidence            56789999999999999998643 346889999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   ++..++|+|||++......... ......++..|+|||++....++.++|||||||++|||++ |+.
T Consensus       137 -------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~  202 (260)
T cd05067         137 -------------ETLCCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRI  202 (260)
T ss_pred             -------------CCCCEEEccCcceeecCCCCcc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCC
Confidence                         4778999999999876532211 1223356788999999988889999999999999999999 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ||......   .......    ..          .....+...+..+.+|+.+||+.+|++||++++++..|+.
T Consensus       203 p~~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         203 PYPGMTNP---EVIQNLE----RG----------YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCChH---HHHHHHH----cC----------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            99754321   1111110    00          0001111234679999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=6.4e-41  Score=326.27  Aligned_cols=254  Identities=26%  Similarity=0.407  Sum_probs=201.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.++||+|+||.||+|.+..          ...||||.++.... ..+.+.+|+.++++++|+||+++++++. .
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~----------~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~   72 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNG----------TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-E   72 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecC----------CceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-C
Confidence            4579999999999999999998753          23699999986433 3467899999999999999999999874 4


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+   |+||||||+|||++             
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~-------------  136 (262)
T cd05071          73 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVG-------------  136 (262)
T ss_pred             CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEc-------------
Confidence            5689999999999999999653 345789999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  +++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       137 ------------~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p  203 (262)
T cd05071         137 ------------ENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  203 (262)
T ss_pred             ------------CCCcEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence                        4778999999999865443321 1122346778999999988899999999999999999999 8888


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.......   .......              ..........+..+.+|+.+||+.||++||++.++++.|+..
T Consensus       204 ~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         204 YPGMVNRE---VLDQVER--------------GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CCCCChHH---HHHHHhc--------------CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            86543211   1110000              000111223457789999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.1e-41  Score=329.39  Aligned_cols=263  Identities=24%  Similarity=0.385  Sum_probs=207.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|++.+.||+|+||.||+|.++.++..     ....||+|.+...... ....+.+|+.++++++|+||+++++++..
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~-----~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEK-----VKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCC-----cceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence            35788899999999999999998653221     2347999998766432 23568899999999999999999999987


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       ...++||||+++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++             
T Consensus        81 -~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~-------------  143 (279)
T cd05057          81 -SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVK-------------  143 (279)
T ss_pred             -CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEc-------------
Confidence             7889999999999999999776667999999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  ++..+||+|||+++...............++..|+|||.+....++.++|||||||++|||++ |+.|
T Consensus       144 ------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  211 (279)
T cd05057         144 ------------TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ------------CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCC
Confidence                        467799999999987654332222222234678999999988899999999999999999998 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |.......   +.....    ...          ....+..++..+.+++.+||..||.+||++.++++.|..+..
T Consensus       212 ~~~~~~~~---~~~~~~----~~~----------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         212 YEGIPAVE---IPDLLE----KGE----------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CCCCCHHH---HHHHHh----CCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            97543211   111111    000          001111234578899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.9e-41  Score=324.53  Aligned_cols=250  Identities=29%  Similarity=0.496  Sum_probs=204.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||.|+||.||+|..           .|+.||||.+..... ...++.+|+.++++++|+||+++++++...
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~-----------~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   72 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY-----------RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQG   72 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe-----------cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCC
Confidence            45788999999999999999976           356899999986644 446789999999999999999999999988


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+++   |+|+||||+|||++             
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~-------------  136 (256)
T cd05039          73 NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVS-------------  136 (256)
T ss_pred             CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEe-------------
Confidence            99999999999999999996543 36899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+++.......     ...++..|+|||++....++.++|||||||++|||++ |..|
T Consensus       137 ------------~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p  199 (256)
T cd05039         137 ------------EDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  199 (256)
T ss_pred             ------------CCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCC
Confidence                        477899999999987633221     2345678999999988889999999999999999997 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |......   .+.....    ..          .....+...+..+.+|+.+||..+|.+||++.++++.|+.+
T Consensus       200 ~~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         200 YPRIPLK---DVVPHVE----KG----------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             CCCCCHH---HHHHHHh----cC----------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            8654221   1111111    00          01111122357889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.9e-41  Score=330.98  Aligned_cols=274  Identities=28%  Similarity=0.410  Sum_probs=204.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +.|++++.||+|+||.||+|++...     ...++..||+|.++.... .....+.+|+.+++.++|+||+++++++...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   78 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPE-----GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED   78 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccC-----CCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence            3578899999999999999986431     123678999999875532 2235688999999999999999999998775


Q ss_pred             --CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 --DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 --~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                        ...++||||+++++|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++            
T Consensus        79 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~------------  143 (284)
T cd05079          79 GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVE------------  143 (284)
T ss_pred             CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEc------------
Confidence              5688999999999999999765556899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++........ .......|+..|+|||++.+..++.++|||||||++|||++++.
T Consensus       144 -------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~  210 (284)
T cd05079         144 -------------SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCD  210 (284)
T ss_pred             -------------CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCC
Confidence                         4678999999999876543221 11223457788999999988889999999999999999999877


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccc--cccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGER--RRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+......    ......+...+.  ......+........+...+..+.+|+.+||+.||.+||++.++++.|+.+
T Consensus       211 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         211 SESSPMTL----FLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CCccccch----hhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            65321110    000000000000  000000000001111122457899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.2e-40  Score=325.40  Aligned_cols=255  Identities=27%  Similarity=0.379  Sum_probs=193.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.||+|+||.||+|.+...       .++..+|+|.++..... ....+.+|+.++++++||||+++++++.+....++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   73 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSG-------YTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLV   73 (269)
T ss_pred             CcccccCCceEEEEEEcCC-------CCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEE
Confidence            3689999999999987532       14568999998765432 234688999999999999999999999998899999


Q ss_pred             EEccCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          214 YEFMPRGSLENHLFRR----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      |||+++|+|.+++...    ....++..++.++.|++.||+|||+.+   |+||||||+|||++                
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~----------------  134 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLT----------------  134 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEc----------------
Confidence            9999999999998642    224567788899999999999999988   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-------CCCccccchhHHHHHHHHHh-
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-------HLTSRSDVYSFGVVLLEMLT-  361 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-------~~~~~~DIwSlGvil~ellt-  361 (511)
                               .+..+||+|||+++...............|+..|+|||++.+.       .++.++|||||||++|||++ 
T Consensus       135 ---------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~  205 (269)
T cd05087         135 ---------ADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFEL  205 (269)
T ss_pred             ---------CCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhC
Confidence                     4678999999999765443322222335678899999988632       35789999999999999996 


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      |..||.......   ......  .   ........+.+.    ...+..+.+|+.+|| .+|++|||+.+|+..|.
T Consensus       206 g~~p~~~~~~~~---~~~~~~--~---~~~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         206 GSQPYRHLSDEQ---VLTYTV--R---EQQLKLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCCCCCChHH---HHHHHh--h---cccCCCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            999996543211   111100  0   000111111111    122456889999999 68999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=4.5e-41  Score=330.50  Aligned_cols=276  Identities=29%  Similarity=0.376  Sum_probs=209.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      +.|++.+.||+|+||.||+|++...+     ..++..||||++...... ....+.+|+.+++.+.|+||+++++++.. 
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~   78 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLG-----DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP   78 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCC-----CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC
Confidence            46778899999999999999876421     125789999999866543 34678999999999999999999999877 


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       ....++||||+++++|.+++......+++..++.++.|++.||+|||+++   |+|+||||+|||++            
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~------------  143 (284)
T cd05038          79 GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVE------------  143 (284)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEc------------
Confidence             56789999999999999999766556899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .+..++|+|||++.......... ......++..|+|||++.+..++.++|||||||++|||++|..
T Consensus       144 -------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~  210 (284)
T cd05038         144 -------------SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD  210 (284)
T ss_pred             -------------CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence                         46789999999998776332221 1112345667999999988899999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||.............  .........+...+........+..++..+.+|+.+||+.+|.+||++.+|++.|+.+
T Consensus       211 p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         211 PSQSPPAEFLRMIGI--AQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             Ccccccchhcccccc--ccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            986532211000000  0000000000011111111111223356789999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=4.9e-41  Score=331.62  Aligned_cols=262  Identities=27%  Similarity=0.422  Sum_probs=204.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|.+...    ....++..||+|++..... .....+.+|+.++++++||||+++++++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~   79 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGL----LPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV   79 (288)
T ss_pred             hHhceecccccccccccEEEEEEccc----CCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence            46799999999999999999987531    0112567899999976533 223568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS---------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF  265 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~---------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL  265 (511)
                      ++..++||||+++|+|.+++....                     ..+++..++.++.||+.||+|||.++   ++||||
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl  156 (288)
T cd05050          80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDL  156 (288)
T ss_pred             CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccc
Confidence            999999999999999999996421                     24678888999999999999999988   999999


Q ss_pred             CCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCc
Q 010432          266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS  345 (511)
Q Consensus       266 Kp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~  345 (511)
                      ||+|||++                         +++.+||+|||++................++..|+|||++.+..++.
T Consensus       157 ~p~nil~~-------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  211 (288)
T cd05050         157 ATRNCLVG-------------------------ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTT  211 (288)
T ss_pred             cHhheEec-------------------------CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCc
Confidence            99999998                         47789999999998654332221122234567899999998889999


Q ss_pred             cccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          346 RSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       346 ~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      ++|||||||++|||++ |..||.+....   .......    .. ..         ...+...+..+.+|+.+||+.||.
T Consensus       212 ~~Dv~slG~il~el~~~~~~p~~~~~~~---~~~~~~~----~~-~~---------~~~~~~~~~~l~~li~~~l~~~p~  274 (288)
T cd05050         212 ESDVWAYGVVLWEIFSYGMQPYYGMAHE---EVIYYVR----DG-NV---------LSCPDNCPLELYNLMRLCWSKLPS  274 (288)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHh----cC-CC---------CCCCCCCCHHHHHHHHHHcccCcc
Confidence            9999999999999998 88888643221   1111110    00 00         001112356789999999999999


Q ss_pred             CCCCHHHHHHHhcC
Q 010432          425 ARPLMSEVVEALKP  438 (511)
Q Consensus       425 ~RPs~~eil~~L~~  438 (511)
                      +||++.||++.|++
T Consensus       275 ~Rpt~~el~~~l~~  288 (288)
T cd05050         275 DRPSFASINRILQR  288 (288)
T ss_pred             cCCCHHHHHHHhhC
Confidence            99999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=8.2e-41  Score=324.07  Aligned_cols=252  Identities=29%  Similarity=0.446  Sum_probs=201.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ++||+|+||.||+|.+...+      ++...||||.+..... ...+.+.+|+.++++++|+||+++++++.. ...++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v   73 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSG------GKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMV   73 (257)
T ss_pred             CcCCccCcccEEeeeEecCC------CCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEE
Confidence            46899999999999986421      1344799999987765 445678999999999999999999999988 889999


Q ss_pred             EEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          214 YEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||+++|+|.+++.... ..+++..+..++.|++.||+|||+++   |+|+||||+|||++                   
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~-------------------  131 (257)
T cd05040          74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLA-------------------  131 (257)
T ss_pred             EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEe-------------------
Confidence            99999999999997654 56899999999999999999999988   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNR  370 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~  370 (511)
                            .++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus       132 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  205 (257)
T cd05040         132 ------SDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS  205 (257)
T ss_pred             ------cCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence                  46789999999998765432211 1123457889999999988899999999999999999998 999996442


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ...   .......   ...          ....+...+..+.+|+.+||+.+|++||++.+|++.|.
T Consensus       206 ~~~---~~~~~~~---~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         206 GSQ---ILKKIDK---EGE----------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHH---HHHHHHh---cCC----------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            211   1111110   000          00111223567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-42  Score=336.22  Aligned_cols=267  Identities=28%  Similarity=0.387  Sum_probs=216.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ..+.|+.-++||+||||.||-+..+.         ||+.||.|.+.+.....   ....+.|-.||.+++.+.||.+-..
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvra---------TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA  253 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRA---------TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA  253 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEec---------chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence            34678888999999999999998876         88999999997654332   2346789999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      |...+.+||||..|+||||.-+|.+.+ ..+++..++.++.+|+.||++||..+   ||+|||||+|||||         
T Consensus       254 feTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLD---------  321 (591)
T KOG0986|consen  254 FETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLD---------  321 (591)
T ss_pred             ecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeec---------
Confidence            999999999999999999999887653 46999999999999999999999988   99999999999999         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      +.++++|+|+|||.....+...   ...+||.+|||||++.+..|+..+|+|||||+||||+.|
T Consensus       322 ----------------d~GhvRISDLGLAvei~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G  382 (591)
T KOG0986|consen  322 ----------------DHGHVRISDLGLAVEIPEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAG  382 (591)
T ss_pred             ----------------cCCCeEeeccceEEecCCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcc
Confidence                            6899999999999988775542   334899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhcCCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVEALKPLPN  441 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~-eil~~L~~l~~  441 (511)
                      +.||..........             .+.+.+. .-...++..+++++++|...+|++||.+|.... +=.+.+...+.
T Consensus       383 ~sPFr~~KeKvk~e-------------Evdrr~~-~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hpf  448 (591)
T KOG0986|consen  383 HSPFRQRKEKVKRE-------------EVDRRTL-EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPF  448 (591)
T ss_pred             cCchhhhhhhhhHH-------------HHHHHHh-cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcc
Confidence            99997543322110             0001100 012335566789999999999999999998554 33444455666


Q ss_pred             CCcCCC
Q 010432          442 LKDMAS  447 (511)
Q Consensus       442 ~~~~~~  447 (511)
                      +++++.
T Consensus       449 Fk~lnw  454 (591)
T KOG0986|consen  449 FKDLNW  454 (591)
T ss_pred             cccCCH
Confidence            666554

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.3e-40  Score=321.34  Aligned_cols=247  Identities=31%  Similarity=0.454  Sum_probs=196.9

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ++||+|+||.||+|...          .+..||+|.+....... ...+.+|+.++++++|+||+++++++...+..++|
T Consensus         1 ~~ig~g~~g~vy~~~~~----------~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   70 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK----------DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV   70 (250)
T ss_pred             CccCCCCCceEEEEEec----------CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEE
Confidence            36999999999999864          35689999987654322 24688999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++++|.+++......+++..++.++.|++.||.|||+++   ++||||||+||+++                    
T Consensus        71 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~--------------------  127 (250)
T cd05085          71 MELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVG--------------------  127 (250)
T ss_pred             EECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEc--------------------
Confidence            9999999999998765566899999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPN  372 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~  372 (511)
                           +++.+||+|||++......... ......++..|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus       128 -----~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~  201 (250)
T cd05085         128 -----ENNVLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ  201 (250)
T ss_pred             -----CCCeEEECCCccceeccccccc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH
Confidence                 4778999999999764332211 1112244678999999988889999999999999999998 99999754321


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .   ......    ..          .....+...+..+.+|+.+||+.+|++||++.++++.|.
T Consensus       202 ~---~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         202 Q---AREQVE----KG----------YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             H---HHHHHH----cC----------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            1   111110    00          011112223578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=7.8e-41  Score=325.17  Aligned_cols=254  Identities=26%  Similarity=0.450  Sum_probs=194.1

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEe-CCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-~~~~~l  212 (511)
                      +.||+|+||.||+|.+....      .....||||.+.... ......+.+|+.+++.++||||+++++++.. ++..++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~l   74 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSD------GQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLV   74 (262)
T ss_pred             CcccccCCceEEEEEEecCC------CceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEE
Confidence            36899999999999875422      135689999986432 2234578899999999999999999997764 556889


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      ||||+.+|+|.+++......+.+..++.++.||+.||.|||+.+   |+||||||+|||++                   
T Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~-------------------  132 (262)
T cd05058          75 VLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLD-------------------  132 (262)
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEc-------------------
Confidence            99999999999999765556778888999999999999999988   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC-CCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG-RRSMDKN  369 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg-~~pf~~~  369 (511)
                            +++.+||+|||+++.........  ......++..|+|||++.+..++.++|||||||++|||++| .+||...
T Consensus       133 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~  206 (262)
T cd05058         133 ------ESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  206 (262)
T ss_pred             ------CCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence                  46789999999998654322111  11223567889999999888999999999999999999995 5556432


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ..   ..+.....   . .      ...    ..+...+..+.+|+.+||+.+|++||++.+|++.|+.+
T Consensus       207 ~~---~~~~~~~~---~-~------~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         207 DS---FDITVYLL---Q-G------RRL----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CH---HHHHHHHh---c-C------CCC----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            21   11111110   0 0      000    01112246789999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.3e-41  Score=340.61  Aligned_cols=262  Identities=22%  Similarity=0.309  Sum_probs=196.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++++.||+|+||.||+|.+..         ++..||||++.....  .....+.+|+.+|++++|+||+++++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTR---------LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVF   83 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECC---------CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhh
Confidence            34689999999999999999998765         677999999975432  2234577899999999999999999987


Q ss_pred             EeC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          205 IED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       205 ~~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ...      ...|++||++ +++|.+++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++     
T Consensus        84 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~-----  152 (343)
T cd07878          84 TPATSIENFNEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVN-----  152 (343)
T ss_pred             cccccccccCcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEEC-----
Confidence            643      3568999998 7899888743  46899999999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~  357 (511)
                                          .++.+||+|||+++.....     .....||+.|+|||++.+ ..++.++|||||||++|
T Consensus       153 --------------------~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  207 (343)
T cd07878         153 --------------------EDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  207 (343)
T ss_pred             --------------------CCCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHH
Confidence                                4778999999999875432     223578999999999876 57899999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhccc------------cccccccCCccCCC---CCHHHHHHHHHHHHHhcccC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGER------------RRFYRLIDPRLEGH---FSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~---~~~~~~~~~~~Li~~cl~~d  422 (511)
                      +|++|+.||........  +..+........            ..+...+.......   ......+.+.+|+.+||+.|
T Consensus       208 el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d  285 (343)
T cd07878         208 ELLKGKALFPGNDYIDQ--LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCC
Confidence            99999999975432111  100000000000            00000000000000   00012345789999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|||+.+++++
T Consensus       286 p~~R~s~~ell~h  298 (343)
T cd07878         286 SDKRISASEALAH  298 (343)
T ss_pred             hhhCCCHHHHhcC
Confidence            9999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-40  Score=320.92  Aligned_cols=248  Identities=29%  Similarity=0.445  Sum_probs=199.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ++||+|+||.||+|.+..          ++.||+|.+...... ....+.+|++++++++|+||+++++++......++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~----------~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   70 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG----------NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV   70 (251)
T ss_pred             CccccCCCceEEEEEEeC----------CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEE
Confidence            469999999999998753          568999998765443 345788999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++++|.+++......+++..++.++.+++.||.|||+++   |+||||||+|||++                    
T Consensus        71 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~--------------------  127 (251)
T cd05041          71 MELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVG--------------------  127 (251)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEc--------------------
Confidence            9999999999999765567889999999999999999999998   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPN  372 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~  372 (511)
                           .+..+||+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus       128 -----~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~  202 (251)
T cd05041         128 -----ENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ  202 (251)
T ss_pred             -----CCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH
Confidence                 477899999999986543222111112234677999999988899999999999999999999 88888654321


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ..   ......              ......+...+..+.+|+.+||..+|.+||++.+|++.|.
T Consensus       203 ~~---~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         203 QT---RERIES--------------GYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HH---HHHHhc--------------CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            11   111100              0011112233568999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-41  Score=310.42  Aligned_cols=253  Identities=29%  Similarity=0.431  Sum_probs=202.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      ++.+.+..||.|+.|.||+++++.         +|...|||.+..... ...+++++.++++.+- +.|.||+.+|||..
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs---------~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~  162 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRS---------TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT  162 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcc---------cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee
Confidence            455667789999999999999976         788999999987644 3345678888887666 48999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..+++.||.| ..-+..++.+-..++++..+-++...++.||.||-.++.  |||||+||+|||+|             
T Consensus       163 n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlD-------------  226 (391)
T KOG0983|consen  163 NTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLD-------------  226 (391)
T ss_pred             CchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEc-------------
Confidence            99999999998 445666676667789999999999999999999987543  99999999999999             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                  +.+.+||||||++-.+.+..   ..++..|.+.|||||.+.   ...|+.++||||||++|+||.||+
T Consensus       227 ------------e~GniKlCDFGIsGrlvdSk---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~  291 (391)
T KOG0983|consen  227 ------------ERGNIKLCDFGISGRLVDSK---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQ  291 (391)
T ss_pred             ------------cCCCEEeecccccceeeccc---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhccc
Confidence                        58899999999998775533   345678999999999986   457899999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .||.+....-  .....+.   .       ...|.+....  .+++.+.+|+..||++|+.+||...+++++
T Consensus       292 yPy~~c~tdF--e~ltkvl---n-------~ePP~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  292 YPYKGCKTDF--EVLTKVL---N-------EEPPLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             CCCCCCCccH--HHHHHHH---h-------cCCCCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            9998643221  1111111   1       1112233222  257889999999999999999999999875

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=5.5e-41  Score=333.94  Aligned_cols=262  Identities=24%  Similarity=0.401  Sum_probs=203.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|+..+.||+|+||.||+|.+...+..     ....||+|.+...... ....+.+|+.+++.++|+||+++++++..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~   80 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGET-----VKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS   80 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCc-----ceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC
Confidence            35788889999999999999988653221     1236899988765332 22368899999999999999999999875


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      . ..++++||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        81 ~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~-------------  143 (303)
T cd05110          81 P-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVK-------------  143 (303)
T ss_pred             C-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeec-------------
Confidence            4 467999999999999999776667899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  ++..+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       144 ------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p  211 (303)
T cd05110         144 ------------SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP  211 (303)
T ss_pred             ------------CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence                        367799999999987644322212223346788999999998999999999999999999997 8999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |......   ....+...    ...          ...+..++..+.+++.+||..+|++||++.++++.|+.+.
T Consensus       212 ~~~~~~~---~~~~~~~~----~~~----------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         212 YDGIPTR---EIPDLLEK----GER----------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             CCCCCHH---HHHHHHHC----CCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            8654211   11111110    000          0011123467889999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.5e-40  Score=321.75  Aligned_cols=251  Identities=26%  Similarity=0.377  Sum_probs=206.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++.+.||+|+||.||+|.+..         ++..||+|.+.....  ...+.+|++++++++|+||+++++++..+.
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~   71 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKE---------TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT   71 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcC---------CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence            578999999999999999999875         467999999976532  567899999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..|+++||+++++|.+++......+++..++.++.|++.||.|||+.+   |+|+||+|+||+++               
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~---------------  133 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLN---------------  133 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEC---------------
Confidence            999999999999999999766678899999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                .++.+||+|||++........  ......|+..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus       134 ----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~  201 (256)
T cd06612         134 ----------EEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD  201 (256)
T ss_pred             ----------CCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                      467899999999987654321  12234588999999999888999999999999999999999999975


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ........   ...          ....+  ....+...+..+.+++.+||+.||.+||++.+|+++
T Consensus       202 ~~~~~~~~---~~~----------~~~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         202 IHPMRAIF---MIP----------NKPPP--TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             cchhhhhh---hhc----------cCCCC--CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            43221100   000          00000  011122345678999999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=8.8e-41  Score=328.91  Aligned_cols=264  Identities=23%  Similarity=0.316  Sum_probs=198.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+|++..         ++..||||.+.....  .....+.+|+.++++++||||+++++++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   71 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKK---------TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE   71 (285)
T ss_pred             CceEeeEecccCceEEEEEEECC---------CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC
Confidence            47888999999999999999865         577999999875432  2235678999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +..++||||+. ++|.+++...  ...+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~------------  135 (285)
T cd07861          72 SRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLID------------  135 (285)
T ss_pred             CeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEc------------
Confidence            99999999996 6898888643  256899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||++........  ......+++.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus       136 -------------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~  200 (285)
T cd07861         136 -------------NKGVIKLADFGLARAFGIPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKP  200 (285)
T ss_pred             -------------CCCcEEECcccceeecCCCcc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCC
Confidence                         477899999999976543221  1223467899999998865 457899999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhh----------hccccccccccCCccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPH----------LGERRRFYRLIDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||........  ........          ......+....+....   .......+.++.+||.+||+.||.+|||+.+
T Consensus       201 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~  278 (285)
T cd07861         201 LFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKK  278 (285)
T ss_pred             CCCCCCHHHH--HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence            9975432111  10000000          0000000000000000   0001123567889999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      |+.+
T Consensus       279 ll~~  282 (285)
T cd07861         279 ALNH  282 (285)
T ss_pred             HhcC
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.5e-40  Score=329.82  Aligned_cols=252  Identities=23%  Similarity=0.331  Sum_probs=205.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..+|++.+.||+|+||.||+|....         ++..||||.+........+.+.+|+.+++.++|+||+++++++..+
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~   88 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIA---------TGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG   88 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECC---------CCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            3689999999999999999998765         5779999999876555556788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++..  ..+++..+..++.|++.||.|||+.+   |+||||||+|||++              
T Consensus        89 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~--------------  149 (297)
T cd06656          89 DELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLG--------------  149 (297)
T ss_pred             CEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC--------------
Confidence            999999999999999999854  35788999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.++|+|||++.........  .....|++.|+|||.+.+..++.++|||||||++|+|++|..||.
T Consensus       150 -----------~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~  216 (297)
T cd06656         150 -----------MDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL  216 (297)
T ss_pred             -----------CCCCEEECcCccceEccCCccC--cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                       4778999999999765433211  223468999999999998889999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ..........  .    .         .........+...+..+.+|+.+||+.||++||++.+|+++
T Consensus       217 ~~~~~~~~~~--~----~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         217 NENPLRALYL--I----A---------TNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CCCcchheee--e----c---------cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            5432111000  0    0         00000011122335678899999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-40  Score=327.92  Aligned_cols=253  Identities=26%  Similarity=0.410  Sum_probs=200.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++++.||+|+||.||+|.+..         ++..||+|.+..... .....+.+|+.++++++|+||+++++++..+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   71 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRP---------TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE   71 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcC---------CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC
Confidence            368889999999999999998865         577999999875422 2235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      +..++||||+++++|..++...  ...+++..+..++.||+.||.|||+ .+   |+||||||+|||++           
T Consensus        72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~-----------  137 (286)
T cd06622          72 GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVN-----------  137 (286)
T ss_pred             CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEEC-----------
Confidence            9999999999999999888653  2368999999999999999999996 46   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC------CCCccccchhHHHHHHH
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG------HLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~------~~~~~~DIwSlGvil~e  358 (511)
                                    .++.+||+|||++.......    .....|+..|+|||++.+.      .++.++|||||||++|+
T Consensus       138 --------------~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~  199 (286)
T cd06622         138 --------------GNGQVKLCDFGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILE  199 (286)
T ss_pred             --------------CCCCEEEeecCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHH
Confidence                          46789999999997654322    2234688899999998543      35889999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |++|..||..........   ...          .+... ....++...+.++.+||.+||+.+|++||++.+++++-
T Consensus       200 l~~g~~pf~~~~~~~~~~---~~~----------~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~  263 (286)
T cd06622         200 MALGRYPYPPETYANIFA---QLS----------AIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP  263 (286)
T ss_pred             HHhCCCCCCCcchhhHHH---HHH----------HHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence            999999996543211110   000          00000 01122233567889999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.8e-40  Score=323.56  Aligned_cols=251  Identities=25%  Similarity=0.412  Sum_probs=201.0

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---------HHHHHHHHHHHhCCCCCCcceE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---------HKEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---------~~~~~~E~~il~~l~H~nIv~l  200 (511)
                      +|.+...||+|+||.||+|.+..         ++..||+|.+.......         .+.+.+|+.++++++||||+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNAS---------SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQY   71 (267)
T ss_pred             CccccceeecCCCeEEEEEEecC---------CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            46778899999999999998765         56789999987543321         1357789999999999999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ++++...+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+++   |+||||||+|||++       
T Consensus        72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~-------  140 (267)
T cd06628          72 LGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVD-------  140 (267)
T ss_pred             EEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEc-------
Confidence            99999999999999999999999999654 46889999999999999999999988   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcc----eeeeeccccccccCCcccccCCCCccccchhHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil  356 (511)
                                        ++..+||+|||+++........    .......|+..|+|||++.+..++.++|||||||++
T Consensus       141 ------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il  202 (267)
T cd06628         141 ------------------NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLV  202 (267)
T ss_pred             ------------------CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHH
Confidence                              4778999999999876532111    011234688999999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |+|++|+.||.......  ...   .        .....    ....+...+..+.++|.+||+.||.+||++.+|+++
T Consensus       203 ~~l~~g~~p~~~~~~~~--~~~---~--------~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         203 VEMLTGKHPFPDCTQLQ--AIF---K--------IGENA----SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHHhhCCCCCCCccHHH--HHH---H--------HhccC----CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            99999999997532110  000   0        00011    111222345788999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-40  Score=325.69  Aligned_cols=250  Identities=26%  Similarity=0.438  Sum_probs=194.1

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~~l  212 (511)
                      ++||+|+||.||+|++..++       ....+|+|.++.... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   73 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   73 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCC-------CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceE
Confidence            36899999999999986521       123578998875432 2335688999999999 89999999999999999999


Q ss_pred             EEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          213 VYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ||||+++|+|.+++....               ..+++..++.++.|++.||+|||+++   |+||||||+|||++    
T Consensus        74 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~----  146 (270)
T cd05047          74 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVG----  146 (270)
T ss_pred             EEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEc----
Confidence            999999999999986432               24788999999999999999999988   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           ++..+||+|||++........   ......+..|+|||++....++.++|||||||++|
T Consensus       147 ---------------------~~~~~kl~dfgl~~~~~~~~~---~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~  202 (270)
T cd05047         147 ---------------------ENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  202 (270)
T ss_pred             ---------------------CCCeEEECCCCCccccchhhh---ccCCCCccccCChHHHccCCCCchhhHHHHHHHHH
Confidence                                 477899999999864321111   11123466799999998889999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          358 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       358 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||++ |..||......   .......    .          ......+...+..+.+|+.+||+.||.+||++.+++..|
T Consensus       203 el~~~g~~pf~~~~~~---~~~~~~~----~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  265 (270)
T cd05047         203 EIVSLGGTPYCGMTCA---ELYEKLP----Q----------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  265 (270)
T ss_pred             HHHcCCCCCccccCHH---HHHHHHh----C----------CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence            9997 99999653221   1111110    0          000111122346789999999999999999999999998


Q ss_pred             cCC
Q 010432          437 KPL  439 (511)
Q Consensus       437 ~~l  439 (511)
                      +.+
T Consensus       266 ~~~  268 (270)
T cd05047         266 NRM  268 (270)
T ss_pred             HHh
Confidence            765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.2e-41  Score=324.50  Aligned_cols=255  Identities=29%  Similarity=0.429  Sum_probs=205.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.++||+|+||.||+|.+..          +..||||.+..... ...++.+|+.++++++|+||+++++++..
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~----------~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNG----------TTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSE   72 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcC----------CceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeec
Confidence            45689999999999999999998753          45799999986543 34678999999999999999999999998


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ....++||||+++++|.+++.... ..+++..+..++.||+.||.|||+++   |+|+||||+||+++            
T Consensus        73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~------------  137 (261)
T cd05034          73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVG------------  137 (261)
T ss_pred             CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEc------------
Confidence            889999999999999999997543 46899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   +++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.
T Consensus       138 -------------~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~  203 (261)
T cd05034         138 -------------ENLVCKIADFGLARLIEDDEYT-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRV  203 (261)
T ss_pred             -------------CCCCEEECccccceeccchhhh-hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCC
Confidence                         4788999999999876542211 1112335678999999998889999999999999999998 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ||......   .........              +....+...+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       204 p~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         204 PYPGMTNR---EVLEQVERG--------------YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCHH---HHHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            99654321   111111000              0001111225678999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=9.6e-41  Score=363.14  Aligned_cols=259  Identities=23%  Similarity=0.336  Sum_probs=200.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.++||+|+||.||+|++..         +++.||||++......   ..+++.+|+.++++++||||+++++++.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~---------tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~   72 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPV---------CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS   72 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECC---------CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe
Confidence            579999999999999999998865         6789999999754322   2356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRR----------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~----------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      +++..++||||++||+|.+++...          ...+++..++.++.||+.||+|||+++   |+||||||+|||++  
T Consensus        73 d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd--  147 (932)
T PRK13184         73 DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLG--  147 (932)
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEc--
Confidence            999999999999999999988531          123556778899999999999999998   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc----------------ceeeeeccccccccCCcccc
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK----------------THVSTRVMGTYGYAAPEYVM  339 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~----------------~~~~~~~~Gt~~y~aPE~~~  339 (511)
                                             .++.+||+|||+++.......                .......+||+.|||||++.
T Consensus       148 -----------------------~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~  204 (932)
T PRK13184        148 -----------------------LFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL  204 (932)
T ss_pred             -----------------------CCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc
Confidence                                   477899999999986521100                00112357999999999999


Q ss_pred             cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhc
Q 010432          340 TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       340 ~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl  419 (511)
                      +..++.++|||||||++|||++|+.||.........    . ...         ...+... ......+..+.+++.+||
T Consensus       205 g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~----~-~~~---------i~~P~~~-~p~~~iP~~L~~LI~rcL  269 (932)
T PRK13184        205 GVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS----Y-RDV---------ILSPIEV-APYREIPPFLSQIAMKAL  269 (932)
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh----h-hhh---------ccChhhc-cccccCCHHHHHHHHHHc
Confidence            999999999999999999999999999753221110    0 000         0000000 000123467889999999


Q ss_pred             ccCCCCCC-CHHHHHHHhcCC
Q 010432          420 SRDPKARP-LMSEVVEALKPL  439 (511)
Q Consensus       420 ~~dP~~RP-s~~eil~~L~~l  439 (511)
                      +.||++|| ++.++++.|+.+
T Consensus       270 ~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        270 AVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             cCChhhCcCHHHHHHHHHHHH
Confidence            99999997 566677766543

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=6.9e-41  Score=327.29  Aligned_cols=261  Identities=25%  Similarity=0.369  Sum_probs=205.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|.+.++||+|+||.||+|.+....      .....||||...... ....+.+.+|+.++++++|+||+++++++..
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPE------NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCC------CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC
Confidence            356888899999999999999876421      134579999987654 2334578899999999999999999998865


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       +..++||||+++|+|.+++......+++..++.++.|++.||.|||+++   ++|+||||+|||++             
T Consensus        79 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~-------------  141 (270)
T cd05056          79 -NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVS-------------  141 (270)
T ss_pred             -CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEe-------------
Confidence             5578999999999999999765556899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .+..+||+|||+++........ ..+...++..|+|||++....++.++|||||||++|||++ |..|
T Consensus       142 ------------~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         142 ------------SPDCVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             ------------cCCCeEEccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCC
Confidence                        3678999999999876543221 1222345678999999988889999999999999999996 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |.......   ......    ....          ...+...+..+.+|+.+||..+|.+||++.+++..|+.+.+
T Consensus       209 f~~~~~~~---~~~~~~----~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         209 FQGVKNND---VIGRIE----NGER----------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             CCCCCHHH---HHHHHH----cCCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            97543221   111110    0000          01112335688999999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.6e-40  Score=334.19  Aligned_cols=264  Identities=19%  Similarity=0.222  Sum_probs=194.9

Q ss_pred             CCCccccC--CCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          133 PESLLGEG--GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       133 ~~~~lG~G--~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++++||+|  +|++||++.++.         +|+.||||++......  ....+.+|+.+++.++|||||++++++..++
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~   72 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKP---------TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN   72 (327)
T ss_pred             hhhhccccccceEEEEEEeecc---------cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC
Confidence            46789999  788999998876         6889999999765322  2245678999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+++   |+||||||+|||++              
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~--------------  135 (327)
T cd08227          73 ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILIS--------------  135 (327)
T ss_pred             EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEe--------------
Confidence            999999999999999998653 345899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCccccc--CCCCccccchhHHHHHHHHH
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~ell  360 (511)
                                 .++.++++|||.+..........     ......++..|+|||++.+  ..++.++|||||||++|||+
T Consensus       136 -----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~  204 (327)
T cd08227         136 -----------VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA  204 (327)
T ss_pred             -----------cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHH
Confidence                       36779999998765432211100     0112356788999999875  46899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccc---------------------ccccc---------ccCCccCCCCCHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGER---------------------RRFYR---------LIDPRLEGHFSIKGAQK  410 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~---------~~~~~~~~~~~~~~~~~  410 (511)
                      +|+.||........  ............                     ..+..         ..............+..
T Consensus       205 ~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (327)
T cd08227         205 NGHVPFKDMPATQM--LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPH  282 (327)
T ss_pred             HCCCCCCCcchhHH--HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHH
Confidence            99999975322110  000000000000                     00000         00000001112234568


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          411 AAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       411 ~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.+|+.+||+.||++|||+.+|+++
T Consensus       283 ~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         283 FHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             HHHHHHHHHhhCchhcCCHHHHhcC
Confidence            8999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.4e-40  Score=322.19  Aligned_cols=252  Identities=29%  Similarity=0.497  Sum_probs=201.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|++.+.||+|+||.||+|.+..          +..+|+|.+..... ....+.+|++++++++||||+++++++....
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~----------~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE----------KRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS   72 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC----------CCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC
Confidence            467888999999999999998753          45799999875543 2357889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|.+++......+++..++.++.|++.||+|||+.+   |+||||||+||+++               
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~---------------  134 (256)
T cd05112          73 PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVG---------------  134 (256)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEc---------------
Confidence            999999999999999999766667899999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                .+..+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       135 ----------~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  203 (256)
T cd05112         135 ----------ENQVVKVSDFGMTRFVLDDQYT-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE  203 (256)
T ss_pred             ----------CCCeEEECCCcceeecccCccc-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence                      4678999999999865432211 1112335678999999998899999999999999999998 999996


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .....   .+.....    ..   .....+.       ..+..+.+|+.+||+.+|++||++.++++.|.
T Consensus       204 ~~~~~---~~~~~~~----~~---~~~~~~~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         204 NRSNS---EVVETIN----AG---FRLYKPR-------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             cCCHH---HHHHHHh----CC---CCCCCCC-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            53221   1111110    00   0111111       12467899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.6e-40  Score=322.99  Aligned_cols=253  Identities=28%  Similarity=0.405  Sum_probs=200.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|.+..          +..||+|.+..... ..+.+.+|+.++++++|+||+++++++. .
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~----------~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~   72 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNG----------TTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-E   72 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcC----------CceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-C
Confidence            3568889999999999999998753          34699998875432 3467889999999999999999999875 5


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+.+|+|.+++... ...+++..+..++.||+.||.|||+.+   |+|+||||+|||++             
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~-------------  136 (260)
T cd05069          73 EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVG-------------  136 (260)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEc-------------
Confidence            5689999999999999999653 345789999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  +++.++|+|||++......... ......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       137 ------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p  203 (260)
T cd05069         137 ------------DNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             ------------CCCeEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence                        4778999999999865433221 1122346778999999988899999999999999999999 8999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      |.......   ........              .....+...+..+.+|+.+||..||.+||++.+|++.|+.
T Consensus       204 ~~~~~~~~---~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         204 YPGMVNRE---VLEQVERG--------------YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCCCCHHH---HHHHHHcC--------------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            97543211   11111100              0011122335778999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.5e-40  Score=320.52  Aligned_cols=251  Identities=25%  Similarity=0.373  Sum_probs=204.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|+..+.||.|+||.||.++...         ++..|++|.+.....  .....+.+|+.++++++|+||+++++++.+.
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~   71 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTE---------DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD   71 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcC---------CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC
Confidence            58889999999999999998765         577999999875532  3345688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++|||||++|+|.+++... ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++             
T Consensus        72 ~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~-------------  135 (256)
T cd08221          72 NTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLT-------------  135 (256)
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEe-------------
Confidence            9999999999999999999764 456899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  ++..+||+|||++........  ......|++.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       136 ------------~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~  201 (256)
T cd08221         136 ------------KAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTF  201 (256)
T ss_pred             ------------CCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCC
Confidence                        467899999999987644332  123456899999999998888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .......   ..   .....          ..+. ......+..+.+++.+||..+|.+||++.++++++
T Consensus       202 ~~~~~~~---~~---~~~~~----------~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         202 DATNPLN---LV---VKIVQ----------GNYT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CCCCHHH---HH---HHHHc----------CCCC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            6543211   11   00000          0000 01123356789999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=9e-41  Score=328.80  Aligned_cols=264  Identities=25%  Similarity=0.319  Sum_probs=199.0

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+|++..         +|..||+|.+......  ....+.+|+.++++++|+||+++++++.+.
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~---------~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   71 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD   71 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECC---------CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC
Confidence            47888999999999999999876         6779999999754321  224577899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+. ++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++              
T Consensus        72 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~--------------  133 (284)
T cd07839          72 KKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLIN--------------  133 (284)
T ss_pred             CceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEc--------------
Confidence            99999999996 5888888665567999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+++........  .....++..|+|||++.+. .++.++|||||||++|||++|..||
T Consensus       134 -----------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~  200 (284)
T cd07839         134 -----------KNGELKLADFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  200 (284)
T ss_pred             -----------CCCcEEECccchhhccCCCCCC--cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence                       4678999999999865433221  2234678999999988764 4789999999999999999999887


Q ss_pred             CCCCCCCchhHHHhhhhhhcc--c---cccccccC----CccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGE--R---RRFYRLID----PRLEG-----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~----~~~~~-----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ....... ..+ .........  .   .......+    +....     ......+..+.+|+.+||+.||.+|||+.++
T Consensus       201 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~i  278 (284)
T cd07839         201 FPGNDVD-DQL-KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA  278 (284)
T ss_pred             cCCCCHH-HHH-HHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHH
Confidence            5432211 111 000000000  0   00000000    00000     0111235778899999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +.+
T Consensus       279 l~h  281 (284)
T cd07839         279 LQH  281 (284)
T ss_pred             hcC
Confidence            875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-40  Score=324.60  Aligned_cols=250  Identities=26%  Similarity=0.396  Sum_probs=203.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||.|+||.||+|.+..         ++..||+|.+.... ......+.+|+.+++.++|+||+++++++..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   71 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKR---------TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG   71 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECC---------CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC
Confidence            368888999999999999999865         57799999997654 22335678999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++|+||+++++|.+++...  .+++..+..++.|++.||.|||+++   |+|+||+|+||+++              
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~--------------  132 (274)
T cd06609          72 SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLS--------------  132 (274)
T ss_pred             CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEC--------------
Confidence            9999999999999999998654  7899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 +++.++|+|||+++.......  ......|+..|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       133 -----------~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~  199 (274)
T cd06609         133 -----------EEGDVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLS  199 (274)
T ss_pred             -----------CCCCEEEcccccceeeccccc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence                       477899999999987654321  1233568899999999998889999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .......   .....          ....+.+...   ..+..+.+++.+||..||++||++.+++++
T Consensus       200 ~~~~~~~---~~~~~----------~~~~~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         200 DLHPMRV---LFLIP----------KNNPPSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             cCchHHH---HHHhh----------hcCCCCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            5432111   00000          0001111111   135678999999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.6e-40  Score=329.46  Aligned_cols=251  Identities=24%  Similarity=0.362  Sum_probs=204.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|++.+.||.|+||.||+|.+..         +++.||||.+........+.+.+|+.+++.++|+||+++++++...+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   89 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVA---------TGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD   89 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcC---------CCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc
Confidence            468999999999999999998765         67799999997665555667889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|..++..  ..+++..+..++.|++.||.|||+++   |+|+||||+||+++               
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~---------------  149 (296)
T cd06655          90 ELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLG---------------  149 (296)
T ss_pred             eEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC---------------
Confidence            99999999999999998854  35899999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                +++.+||+|||++.........  .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus       150 ----------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~  217 (296)
T cd06655         150 ----------MDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (296)
T ss_pred             ----------CCCCEEEccCccchhccccccc--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                      4778999999998865443221  2234689999999999888899999999999999999999999976


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .......  .....   ..        .+  ....+...+..+.+||.+||..||.+||++.+|+.+
T Consensus       218 ~~~~~~~--~~~~~---~~--------~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         218 ENPLRAL--YLIAT---NG--------TP--ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             CCHHHHH--HHHHh---cC--------Cc--ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            4331110  00000   00        00  001112234678899999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.2e-40  Score=328.21  Aligned_cols=263  Identities=29%  Similarity=0.381  Sum_probs=203.7

Q ss_pred             cChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCc
Q 010432          119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNL  197 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nI  197 (511)
                      +.++.+....++|++.+.||+|+||.||+|.+..         +++.||+|++.... .....+.+|+.+++++ +|+||
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~---------~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i   77 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKK---------NGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNV   77 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECC---------CCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCe
Confidence            3445556677899999999999999999998865         57799999886532 2235678899999999 79999


Q ss_pred             ceEeeEEE-----eCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          198 VKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       198 v~l~~~~~-----~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      +++++++.     .++..++||||+++++|.+++..   ....+++..+..++.|++.||.|||+++   |+||||||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~n  154 (286)
T cd06638          78 VKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNN  154 (286)
T ss_pred             eeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHh
Confidence            99999884     34578999999999999998753   2346888999999999999999999988   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCC
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLT  344 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~  344 (511)
                      |+++                         +++.+||+|||+++........  .....|++.|+|||++.     +..++
T Consensus       155 ili~-------------------------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~  207 (286)
T cd06638         155 ILLT-------------------------TEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQLDSTYD  207 (286)
T ss_pred             EEEC-------------------------CCCCEEEccCCceeecccCCCc--cccccCCCcccChhhhchhhhcccccc
Confidence            9998                         4677999999999865432211  22346899999999875     34578


Q ss_pred             ccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          345 SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       345 ~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      .++|||||||++|||++|+.||.......  .+...     .      ....+.+  ..+...+..+.+||.+||+.||+
T Consensus       208 ~~~Dv~slGvi~~el~~g~~p~~~~~~~~--~~~~~-----~------~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~  272 (286)
T cd06638         208 ARCDVWSLGITAIELGDGDPPLADLHPMR--ALFKI-----P------RNPPPTL--HQPELWSNEFNDFIRKCLTKDYE  272 (286)
T ss_pred             chhhhhhHHHHHHHHhcCCCCCCCCchhH--HHhhc-----c------ccCCCcc--cCCCCcCHHHHHHHHHHccCCcc
Confidence            89999999999999999999997543211  00000     0      0000000  01112245789999999999999


Q ss_pred             CCCCHHHHHHHh
Q 010432          425 ARPLMSEVVEAL  436 (511)
Q Consensus       425 ~RPs~~eil~~L  436 (511)
                      +||++.+|++++
T Consensus       273 ~Rps~~ell~~~  284 (286)
T cd06638         273 KRPTVSDLLQHV  284 (286)
T ss_pred             cCCCHHHHhhcc
Confidence            999999999865

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.5e-40  Score=324.50  Aligned_cols=260  Identities=30%  Similarity=0.464  Sum_probs=199.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.||+|+||.||+|++.....   ....+..||||.+..... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~---~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILG---PGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYII   77 (269)
T ss_pred             CccccccceeEEeeeeccccc---CcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEE
Confidence            368999999999998864221   012346899998865432 2345788999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          214 YEFMPRGSLENHLFRR------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      |||+++|+|.+++...      ...+++..++.++.||+.||.|||+.+   ++|+||||+|||++.....         
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~---------  145 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYD---------  145 (269)
T ss_pred             EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCC---------
Confidence            9999999999999642      234788999999999999999999988   9999999999999842100         


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 ....+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       146 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~  214 (269)
T cd05044         146 -----------ADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY  214 (269)
T ss_pred             -----------CCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCC
Confidence                       123799999999986544322222223346788999999999999999999999999999998 99999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ......   .......    ..          .....+...+..+.+||.+||..+|.+||++.+|++.|+
T Consensus       215 ~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         215 PALNNQ---EVLQHVT----AG----------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             cccCHH---HHHHHHh----cC----------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            643221   1111110    00          011112234578899999999999999999999999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3.9e-41  Score=326.41  Aligned_cols=254  Identities=31%  Similarity=0.506  Sum_probs=200.7

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHH--HHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~--~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      |++.+.||+|+||+||+++...         +++.||+|++.........  ...+|+.++++++|+||+++++++....
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~---------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~   71 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKK---------NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN   71 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETT---------TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS
T ss_pred             CEEeEEEEeCCCEEEEEEEECC---------CCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc
Confidence            5678899999999999999876         6779999999877543322  2456999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+.+++|.+++. ....+++..++.++.||+.||.|||+++   |+|+||||+|||++               
T Consensus        72 ~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~---------------  132 (260)
T PF00069_consen   72 YLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLD---------------  132 (260)
T ss_dssp             EEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEES---------------
T ss_pred             ccccccccccccccccccc-cccccccccccccccccccccccccccc---cccccccccccccc---------------
Confidence            9999999999999999997 3346899999999999999999999998   99999999999999               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                .++.++|+|||++.......  .......+|..|+|||++. +..++.++||||||+++|+|++|..||.
T Consensus       133 ----------~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~  200 (260)
T PF00069_consen  133 ----------ENGEVKLIDFGSSVKLSENN--ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFE  200 (260)
T ss_dssp             ----------TTSEEEESSGTTTEESTSTT--SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSST
T ss_pred             ----------cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                      47789999999998642111  1233467899999999988 7889999999999999999999999998


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...........   ........  ....    .  ........+.+|+.+||+.||++||++.+++++
T Consensus       201 ~~~~~~~~~~~---~~~~~~~~--~~~~----~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  201 ESNSDDQLEII---EKILKRPL--PSSS----Q--QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             TSSHHHHHHHH---HHHHHTHH--HHHT----T--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             cccchhhhhhh---hhcccccc--cccc----c--ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            55111111111   11000000  0000    0  000013789999999999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=3.7e-40  Score=329.76  Aligned_cols=267  Identities=22%  Similarity=0.317  Sum_probs=190.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe--CCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE--DDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~--~~~~~l  212 (511)
                      .+||+|+||.||+|++....       ++..||+|.+.....  ...+.+|+.+|++++||||+++++++..  +...++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~-------~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l   77 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGK-------DEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWL   77 (317)
T ss_pred             eEeccCCCeeEEEEEecCCC-------ccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEE
Confidence            57999999999999875421       467899999975532  2457899999999999999999998854  567899


Q ss_pred             EEEccCCCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          213 VYEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ||||+. ++|.+++...        ...+++..+..++.||+.||.|||+++   |+||||||+|||+.....       
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~-------  146 (317)
T cd07867          78 LFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGP-------  146 (317)
T ss_pred             EEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCC-------
Confidence            999995 5888877421        235788899999999999999999998   999999999999953211       


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg  362 (511)
                                    .++.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus       147 --------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg  212 (317)
T cd07867         147 --------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS  212 (317)
T ss_pred             --------------CCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhC
Confidence                          3568999999999876443221 11233578999999999876 4589999999999999999999


Q ss_pred             CCCCCCCCCCCc-------hhHHHhhhhh----------hccccccccccC---------Ccc---CCCCCHHHHHHHHH
Q 010432          363 RRSMDKNRPNGE-------HNLVEWARPH----------LGERRRFYRLID---------PRL---EGHFSIKGAQKAAQ  413 (511)
Q Consensus       363 ~~pf~~~~~~~~-------~~~~~~~~~~----------~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~  413 (511)
                      ++||........       ..+.......          ......+.....         ..+   ...........+.+
T Consensus       213 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (317)
T cd07867         213 EPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFL  292 (317)
T ss_pred             CCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHH
Confidence            999975432211       0000000000          000000000000         000   00001112356889


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 010432          414 LAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       414 Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |+.+||+.||.+|||+.|++++
T Consensus       293 ll~~~l~~dP~~R~t~~e~l~h  314 (317)
T cd07867         293 LLQKLLTMDPTKRITSEQALQD  314 (317)
T ss_pred             HHHHHhccCcccccCHHHHhcC
Confidence            9999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.9e-40  Score=319.39  Aligned_cols=255  Identities=25%  Similarity=0.432  Sum_probs=193.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCc-cCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPV-KPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~-~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.||+|+||.||+|.+...+.... .......|++|.+...... ...+.+|+.+|++++|+||+++++++.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            469999999999999876331100 0112346888887755433 5678899999999999999999999988 778999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++.....               
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~---------------  140 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLN---------------  140 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccc---------------
Confidence            9999999999999765557899999999999999999999988   9999999999999842210               


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC--CCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLT-GRRSMDKNR  370 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DIwSlGvil~ellt-g~~pf~~~~  370 (511)
                         ......+||+|||++......      ....++..|+|||++.+.  .++.++|||||||++|||++ |..||....
T Consensus       141 ---~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~  211 (259)
T cd05037         141 ---EGYVPFIKLSDPGIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS  211 (259)
T ss_pred             ---cCCceeEEeCCCCcccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC
Confidence               001226999999999875441      123567889999998876  78999999999999999999 577776543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ......   +..    ...        ...    ......+.+|+.+||..+|.+||++.+|++.|+
T Consensus       212 ~~~~~~---~~~----~~~--------~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         212 SSEKER---FYQ----DQH--------RLP----MPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             chhHHH---HHh----cCC--------CCC----CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            211100   000    000        000    001267889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.6e-40  Score=324.82  Aligned_cols=260  Identities=26%  Similarity=0.391  Sum_probs=205.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++++.||+|+||+||++.+..         ++..||+|++..... ...+.+.+|+++++.++|+||+++++++..
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   74 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIP---------TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN   74 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcC---------CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec
Confidence            3568888999999999999998865         577999999875432 234678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+..++||||+++++|.+++... ..+++..+..++.+++.||.|||+ ++   |+||||||+|||++            
T Consensus        75 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~------------  138 (284)
T cd06620          75 ENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVN------------  138 (284)
T ss_pred             CCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEEC------------
Confidence            99999999999999999988553 468999999999999999999997 46   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.++|+|||++.......    .....||..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       139 -------------~~~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p  201 (284)
T cd06620         139 -------------SRGQIKLCDFGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP  201 (284)
T ss_pred             -------------CCCcEEEccCCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCC
Confidence                         47789999999987543221    1235789999999999888999999999999999999999999


Q ss_pred             CCCCCCCCc-----hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGE-----HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |........     ..+..........       ..+.+   .....+..+.+|+.+||+.||++||++.+++++..-+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         202 FAFSNIDDDGQDDPMGILDLLQQIVQE-------PPPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             CcccchhhhhhhhhhHHHHHHHHHhhc-------cCCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            975433211     1111111111100       00111   1112456789999999999999999999999875433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=2.5e-40  Score=320.57  Aligned_cols=250  Identities=23%  Similarity=0.321  Sum_probs=200.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      +|++.+.||+|+||.||++.+..         +++.||+|.+.....  ...+.+.+|+.++++++|+||+++++.+.. 
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRT---------DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE   71 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcC---------CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC
Confidence            48889999999999999999865         567899999975433  223467889999999999999999998764 


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +...++||||+++++|.+++... ...+++..++.++.|++.||+|||+++   |+|+||||+|||++            
T Consensus        72 ~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~------------  136 (257)
T cd08223          72 DGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLT------------  136 (257)
T ss_pred             CCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEe------------
Confidence            44688999999999999998753 346899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.++|+|||++........  ......|++.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       137 -------------~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~  201 (257)
T cd08223         137 -------------RTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHA  201 (257)
T ss_pred             -------------cCCcEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCC
Confidence                         477899999999986543221  12345689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |......   .   ........          . ....+...+..+.+|+.+||+.||.+||++.+++++
T Consensus       202 ~~~~~~~---~---~~~~~~~~----------~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         202 FNAKDMN---S---LVYRIIEG----------K-LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCCCCHH---H---HHHHHHhc----------C-CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            9743211   1   11110000          0 011222345789999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=4.6e-40  Score=322.85  Aligned_cols=250  Identities=25%  Similarity=0.364  Sum_probs=204.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..|+.++.||.|+||.||+|.+..         ++..||||++..... .....+.+|+.++++++|+||+++++++.++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNR---------TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG   74 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEcc---------CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            357788899999999999998865         577999999875532 2345688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++|+|.+++..  ..+++..+..++.|++.||+|||+.+   ++|+||+|+||+++              
T Consensus        75 ~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~--------------  135 (277)
T cd06640          75 TKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLS--------------  135 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEc--------------
Confidence            999999999999999998854  36888999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.++|+|||++........  ......++..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       136 -----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  202 (277)
T cd06640         136 -----------EQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS  202 (277)
T ss_pred             -----------CCCCEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCC
Confidence                       467799999999976544321  1223468899999999988889999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .........                 .+............+..+.+|+.+||+.+|++||++.+++.+-
T Consensus       203 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  254 (277)
T cd06640         203 DMHPMRVLF-----------------LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHK  254 (277)
T ss_pred             CcChHhHhh-----------------hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhCh
Confidence            543221100                 0011111223345677899999999999999999999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=3e-40  Score=323.52  Aligned_cols=260  Identities=26%  Similarity=0.396  Sum_probs=204.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++++.||+|+||.||+|+.+....    ......||+|.+...... ....+.+|+.++++++|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   80 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEE----EGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA   80 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCc----CCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence            578899999999999999999864321    224568999998765433 345789999999999999999999999988


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS--------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~--------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      +..++||||+++|+|.+++....        ..+++..++.++.||+.||+|||+++   |+||||||+|||++      
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~------  151 (275)
T cd05046          81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVS------  151 (275)
T ss_pred             CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEe------
Confidence            89999999999999999996433        15899999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.++|+|||++......... ......++..|+|||.+.+..++.++|||||||++|+|
T Consensus       152 -------------------~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  211 (275)
T cd05046         152 -------------------SQREVKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEV  211 (275)
T ss_pred             -------------------CCCcEEEcccccccccCccccc-ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHH
Confidence                               4678999999998754332211 12234567889999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          360 LT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       360 lt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ++ |..||.......   ......    ..         .+........+..+.+++.+||+.||.+||++.+++..|.
T Consensus       212 ~~~~~~p~~~~~~~~---~~~~~~----~~---------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         212 FTQGELPFYGLSDEE---VLNRLQ----AG---------KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HhCCCCCccccchHH---HHHHHH----cC---------CcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            99 788886432211   111110    00         0000111123567899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.8e-40  Score=326.53  Aligned_cols=259  Identities=27%  Similarity=0.359  Sum_probs=201.8

Q ss_pred             hHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcce
Q 010432          121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVK  199 (511)
Q Consensus       121 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~  199 (511)
                      ..++....+.|++.+.||.|+||.||+|++..         +++.||+|++..... ....+..|+.++.++ +|+||++
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~   77 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVK---------TGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIAT   77 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcC---------CCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEE
Confidence            34444566789999999999999999999865         577999999865432 235678899999998 7999999


Q ss_pred             EeeEEEe------CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          200 LIGYCIE------DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       200 l~~~~~~------~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      +++++..      .+..|+||||+++|+|.+++... ...+++..++.++.||+.||.|||+++   |+|+||||+||++
T Consensus        78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili  154 (282)
T cd06636          78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLL  154 (282)
T ss_pred             EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEE
Confidence            9999853      46789999999999999988653 345888889999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccc
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRS  347 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~  347 (511)
                      +                         +++.++|+|||++........  ......|+..|+|||++.     ...++.++
T Consensus       155 ~-------------------------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~  207 (282)
T cd06636         155 T-------------------------ENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRS  207 (282)
T ss_pred             C-------------------------CCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCccc
Confidence            8                         477799999999876533211  122356899999999886     35688899


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |||||||++|||++|..||..........  .     .      .....   ........+..+.+||.+||+.||.+||
T Consensus       208 DvwslG~~l~el~~g~~p~~~~~~~~~~~--~-----~------~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rp  271 (282)
T cd06636         208 DIWSLGITAIEMAEGAPPLCDMHPMRALF--L-----I------PRNPP---PKLKSKKWSKKFIDFIEGCLVKNYLSRP  271 (282)
T ss_pred             chhHHHHHHHHHHhCCCCccccCHHhhhh--h-----H------hhCCC---CCCcccccCHHHHHHHHHHhCCChhhCc
Confidence            99999999999999999996543211100  0     0      00000   0111122456899999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+|+++
T Consensus       272 ~~~ell~~  279 (282)
T cd06636         272 STEQLLKH  279 (282)
T ss_pred             CHHHHhcC
Confidence            99999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.1e-41  Score=338.33  Aligned_cols=252  Identities=23%  Similarity=0.309  Sum_probs=210.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ....|.++..||+|.|++|.+|++..         ++..||||++.+.....  ...+.+|+++|+.|+|||||+++.+.
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~---------t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~  124 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHIL---------TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI  124 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecC---------CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            34679999999999999999999876         78899999998775443  24588999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .....+|+||||+.+|.++++|.+.+ .+.+..+..++.|+++|++|||+++   |||||||++||||+           
T Consensus       125 ~t~~~lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~-----------  189 (596)
T KOG0586|consen  125 ETEATLYLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLD-----------  189 (596)
T ss_pred             eecceeEEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccc-----------
Confidence            99999999999999999999997665 4555889999999999999999999   99999999999999           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~  363 (511)
                                    .+..+||+|||++..+....   ...+.+|++.|.|||++.+..| ++++|+||+|++||-|+.|.
T Consensus       190 --------------~~mnikIaDfgfS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~Gs  252 (596)
T KOG0586|consen  190 --------------ENMNIKIADFGFSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGS  252 (596)
T ss_pred             --------------cccceeeeccccceeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecc
Confidence                          57889999999999876433   3456899999999999998887 57999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .||++..-.....                +.+...++-  +.-.+.++.+||+++|..+|.+|+++++|..+-+
T Consensus       253 LPFDG~~lk~Lr~----------------rvl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W  308 (596)
T KOG0586|consen  253 LPFDGQNLKELRP----------------RVLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW  308 (596)
T ss_pred             cccCCcccccccc----------------hheeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence            9998754322110                001111111  1112467889999999999999999999987543

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=4.2e-40  Score=321.56  Aligned_cols=254  Identities=28%  Similarity=0.389  Sum_probs=189.6

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~  214 (511)
                      .||+|+||.||+|.....       .....+|+|.+...... ....+.+|+.+++.++|+||+++++++......++||
T Consensus         2 ~lg~G~fg~v~~~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~   74 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRG-------MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVL   74 (269)
T ss_pred             cCCccCCceEEEEEEecC-------CCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEE
Confidence            589999999999976432       13457899988654322 2346889999999999999999999999999999999


Q ss_pred             EccCCCCHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          215 EFMPRGSLENHLFRRS----LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       215 E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ||+++|+|.+++....    ...++...+.++.||+.||+|||+++   |+||||||+|||++                 
T Consensus        75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~-----------------  134 (269)
T cd05042          75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLT-----------------  134 (269)
T ss_pred             EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEec-----------------
Confidence            9999999999996532    23467788899999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-------CCCCccccchhHHHHHHHHHh-C
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-------GHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DIwSlGvil~ellt-g  362 (511)
                              ++..+||+|||++................++..|+|||++..       ..++.++|||||||++|||++ |
T Consensus       135 --------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~  206 (269)
T cd05042         135 --------ADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAA  206 (269)
T ss_pred             --------CCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCC
Confidence                    477899999999976433222211223456778999998742       356889999999999999999 7


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ..||.......  .+...    ...  ....+..+.    .....+..+.+++..|| .||++||++.+|++.|.
T Consensus       207 ~~p~~~~~~~~--~~~~~----~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         207 DQPYPDLSDEQ--VLKQV----VRE--QDIKLPKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCCCCcCCHHH--HHHHH----hhc--cCccCCCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            78886442211  01000    000  001111111    12233567788999999 59999999999998773

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=5.9e-40  Score=320.06  Aligned_cols=252  Identities=25%  Similarity=0.380  Sum_probs=196.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-----cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-----GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .+|+..+.||+|+||.||+|.+..         ++..||+|.+......     ....+.+|+.++++++|+||++++++
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   72 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVD---------TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGC   72 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcC---------CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEE
Confidence            368899999999999999998765         6779999998654321     12457889999999999999999998


Q ss_pred             EEe--CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +..  ....+++|||+++++|.+++... ..+++...+.++.|++.||.|||+++   |+||||||+||+++        
T Consensus        73 ~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~--------  140 (266)
T cd06651          73 LRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRD--------  140 (266)
T ss_pred             EEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEC--------
Confidence            875  36778999999999999998654 35889999999999999999999988   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                       .+..+||+|||+++........ .......|+..|+|||++.+..++.++|||||||++|||+
T Consensus       141 -----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~  203 (266)
T cd06651         141 -----------------SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEML  203 (266)
T ss_pred             -----------------CCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence                             4678999999999865331111 1112345889999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|+.||.......  ..    ..          .........++......+.+|+ +||..+|++||++.+|+++
T Consensus       204 ~g~~pf~~~~~~~--~~----~~----------~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         204 TEKPPWAEYEAMA--AI----FK----------IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             HCCCCccccchHH--HH----HH----------HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            9999997532110  00    00          0000011222333456677888 6888999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2e-40  Score=325.34  Aligned_cols=248  Identities=24%  Similarity=0.368  Sum_probs=200.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .|+..+.||+|+||.||+|.+..         ++..||+|.+..... .....+.+|+.++++++|+||+++++++..++
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNR---------TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT   75 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcC---------CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC
Confidence            35566789999999999998765         577999999875432 22346889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|.+++..  ..+++..+..++.||+.||.|||+++   |+|+||+|+||+++               
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~---------------  135 (277)
T cd06642          76 KLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLS---------------  135 (277)
T ss_pred             ceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEe---------------
Confidence            99999999999999998853  46889999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                +++.++|+|||++........  ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       136 ----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~  203 (277)
T cd06642         136 ----------EQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD  203 (277)
T ss_pred             ----------CCCCEEEccccccccccCcch--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence                      467899999999986544221  12234688999999999988999999999999999999999999864


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .......   ..              +............+..+.+|+.+||+.+|++||++.+|+++
T Consensus       204 ~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         204 LHPMRVL---FL--------------IPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             cchhhHH---hh--------------hhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            4321110   00              00001111222345678999999999999999999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=6.7e-40  Score=317.20  Aligned_cols=255  Identities=33%  Similarity=0.500  Sum_probs=202.8

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      |++.+.||.|+||.||+|.+...+.     ..+..||+|.+...... ....+.+|+.++..++|+||+++++++...+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   75 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSG-----EKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEP   75 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCC-----CCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCe
Confidence            4567899999999999999875321     13478999999766443 44678899999999999999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~-l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .+++|||+++++|.+++...... +++..+..++.|++.||+|||+.+   ++|+||||+||+++               
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~---------------  137 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVG---------------  137 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEc---------------
Confidence            99999999999999999754433 899999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                +++.++|+|||+++.......... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       138 ----------~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~  206 (258)
T smart00219      138 ----------ENLVVKISDFGLSRDLYDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYP  206 (258)
T ss_pred             ----------cCCeEEEcccCCceeccccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence                      467899999999987655422211 12337889999999988889999999999999999998 788886


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ....   ..+.....    ...          ....+...+..+.+++.+||..||.+|||+.++++.|
T Consensus       207 ~~~~---~~~~~~~~----~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      207 GMSN---EEVLEYLK----KGY----------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCH---HHHHHHHh----cCC----------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            5321   11111111    000          0011112357789999999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=5.7e-40  Score=323.18  Aligned_cols=267  Identities=28%  Similarity=0.351  Sum_probs=201.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|+++.         +++.||+|++.....  ...+.+.+|+.++++++|+||+++++++..
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~   71 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRE---------TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR   71 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECC---------CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee
Confidence            468899999999999999999865         577999999865432  223557899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....++||||+++++|..++. ....+++..++.++.||+.||.|||+++   |+||||||+||+++             
T Consensus        72 ~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~-------------  134 (286)
T cd07847          72 KRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILIT-------------  134 (286)
T ss_pred             CCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEc-------------
Confidence            999999999999888877764 3446899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||++.........  .....++..|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus       135 ------------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p  200 (286)
T cd07847         135 ------------KQGQIKLCDFGFARILTGPGDD--YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL  200 (286)
T ss_pred             ------------CCCcEEECccccceecCCCccc--ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence                        4678999999999876543321  223457889999999876 5688999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhh-hhhhcc------ccccc-cccCCccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          366 MDKNRPNGEHNLVEWA-RPHLGE------RRRFY-RLIDPRLEGHFS-----IKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~-~~~~~~------~~~~~-~~~~~~~~~~~~-----~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |.+............. ......      ...+. ....+......+     ...+..+.+|+.+||+.||++||++.++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  280 (286)
T cd07847         201 WPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL  280 (286)
T ss_pred             CCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH
Confidence            9765432211111100 000000      00000 000000000000     1225678899999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +.+
T Consensus       281 l~~  283 (286)
T cd07847         281 LEH  283 (286)
T ss_pred             hcC
Confidence            864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=3.4e-40  Score=320.62  Aligned_cols=254  Identities=27%  Similarity=0.415  Sum_probs=201.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|.+..          +..||+|.+..... ....+.+|+.++++++|+||+++++++..
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~----------~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   72 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNK----------HTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK   72 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecC----------CccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcC
Confidence            45689999999999999999997643          44699998875432 33578899999999999999999999877


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       ...+++|||+++|+|.+++... ...+++..++.++.||+.||.|||+.+   ++||||||+||+++            
T Consensus        73 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~------------  136 (260)
T cd05073          73 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS------------  136 (260)
T ss_pred             -CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEc------------
Confidence             7789999999999999999653 345788899999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   .++.+||+|||++......... ......++..|+|||++....++.++|||||||++|+|++ |..
T Consensus       137 -------------~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~  202 (260)
T cd05073         137 -------------ASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI  202 (260)
T ss_pred             -------------CCCcEEECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCC
Confidence                         4778999999999865433221 1222346678999999988889999999999999999999 899


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ||......   .+......    .          .........+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       203 p~~~~~~~---~~~~~~~~----~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         203 PYPGMSNP---EVIRALER----G----------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCCCCCHH---HHHHHHhC----C----------CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99754221   11111110    0          0001112235678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=4.8e-40  Score=321.61  Aligned_cols=258  Identities=26%  Similarity=0.435  Sum_probs=199.7

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      |.+.++||+|+||.||+|.+....      .++..||||++.....  ...+++.+|+.+|++++||||+++++++....
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   74 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSED------GSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSR   74 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccC------CCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence            567789999999999999876432      2578999999976532  22456889999999999999999999886532


Q ss_pred             ------eEEEEEEccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          209 ------QRLLVYEFMPRGSLENHLFRR-----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       209 ------~~~lv~E~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                            ..++++||+.+|+|.+++...     ...+++..++.++.||+.||+|||+++   |+||||||+|||++    
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~----  147 (273)
T cd05074          75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLN----  147 (273)
T ss_pred             CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEc----
Confidence                  247899999999999887422     234788899999999999999999988   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           .+..+||+|||+++...............+++.|++||.+....++.++|||||||++|
T Consensus       148 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~  206 (273)
T cd05074         148 ---------------------ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMW  206 (273)
T ss_pred             ---------------------CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHH
Confidence                                 47789999999998765433222222345678899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          358 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       358 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||++ |+.||......   .+..+...    ...          ...+...+..+.+|+.+||+.+|++||++.++++.|
T Consensus       207 el~~~g~~p~~~~~~~---~~~~~~~~----~~~----------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l  269 (273)
T cd05074         207 EIMTRGQTPYAGVENS---EIYNYLIK----GNR----------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL  269 (273)
T ss_pred             HHhhCCCCCCCCCCHH---HHHHHHHc----CCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            9999 88888644221   11111110    000          001112346889999999999999999999999999


Q ss_pred             cCC
Q 010432          437 KPL  439 (511)
Q Consensus       437 ~~l  439 (511)
                      +.+
T Consensus       270 ~~~  272 (273)
T cd05074         270 ELI  272 (273)
T ss_pred             Hhh
Confidence            754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=5.9e-40  Score=317.60  Aligned_cols=250  Identities=25%  Similarity=0.359  Sum_probs=203.0

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+|....         ++..||||.+......  ....+.+|+.+|++++|+||+++++.+..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   71 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKA---------DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED   71 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcC---------CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC
Confidence            57888999999999999998865         5779999999765322  235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++... ...+++..++.++.|++.||.|||+++   |+|+||||+||+++.            
T Consensus        72 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~------------  136 (256)
T cd08220          72 KALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDK------------  136 (256)
T ss_pred             CEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcC------------
Confidence            9999999999999999999754 345899999999999999999999998   999999999999974            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  ++..+||+|||++........   .....|+..|+|||++.+..++.++||||||+++|+|++|+.||
T Consensus       137 ------------~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~  201 (256)
T cd08220         137 ------------HKMVVKIGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAF  201 (256)
T ss_pred             ------------CCCEEEEccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence                        345689999999987654322   12356899999999999888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .......   ......   ..           ....++...+..+.+|+.+||+.||++|||+.+++++
T Consensus       202 ~~~~~~~---~~~~~~---~~-----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         202 EAANLPA---LVLKIM---SG-----------TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             ccCchHH---HHHHHH---hc-----------CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            6543211   111100   00           0001112235678999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.8e-39  Score=317.10  Aligned_cols=254  Identities=23%  Similarity=0.351  Sum_probs=189.3

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~  214 (511)
                      .||+|+||.||+|+.....       ....+++|.+..... ...+.+.+|+.+++.++||||+++++++......++||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~   74 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDT-------GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVF   74 (268)
T ss_pred             cCCCCcCceEEEEEEEcCC-------CcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEE
Confidence            5999999999999764321       234577887765432 33467899999999999999999999999999999999


Q ss_pred             EccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccc
Q 010432          215 EFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL  291 (511)
Q Consensus       215 E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~  291 (511)
                      ||+++|+|.+++....   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++                  
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~------------------  133 (268)
T cd05086          75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLT------------------  133 (268)
T ss_pred             ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEc------------------
Confidence            9999999999996532   34567778899999999999999988   99999999999998                  


Q ss_pred             cccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-------CCCCccccchhHHHHHHHHHh-CC
Q 010432          292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-------GHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       292 ~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                             .++.+||+|||++................|+..|+|||++..       ..++.++|||||||++|||++ |.
T Consensus       134 -------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~  206 (268)
T cd05086         134 -------SDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAA  206 (268)
T ss_pred             -------CCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCC
Confidence                   477899999999865332221112233568899999998753       245789999999999999997 46


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .||......   ......   ...  ......++.+...    ....+.+|+..|| .+|++||++.+|++.|.
T Consensus       207 ~p~~~~~~~---~~~~~~---~~~--~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         207 QPYSHLSDR---EVLNHV---IKD--QQVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCCCCCHH---HHHHHH---Hhh--cccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            677543221   111111   100  1111222222222    3467888999999 68999999999998773

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=7.7e-40  Score=319.14  Aligned_cols=256  Identities=22%  Similarity=0.375  Sum_probs=203.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      +|+..+.||+|+||.||+|....         ++..||+|++......      ....+.+|+.++++++|+||++++++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   71 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVK---------TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGA   71 (268)
T ss_pred             CccccceecCcCceEEEEEEEcC---------CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhce
Confidence            47888999999999999998755         6779999999754321      23568899999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +.+.+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+++   ++|+||||+||+++.         
T Consensus        72 ~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~---------  138 (268)
T cd06630          72 TCEDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDS---------  138 (268)
T ss_pred             eccCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcC---------
Confidence            99999999999999999999998653 46889999999999999999999998   999999999999974         


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                     +...+||+|||++.........  .......||..|+|||++.+..++.++|||||||++|+|++
T Consensus       139 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~  203 (268)
T cd06630         139 ---------------TGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT  203 (268)
T ss_pred             ---------------CCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh
Confidence                           2346999999999876442111  11223568999999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..||.............             ..........++...+..+.+++.+||..+|.+||++.+++++
T Consensus       204 g~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         204 AKPPWNAEKHSNHLALIF-------------KIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             CCCCCCCCCCcchHHHHH-------------HHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            999996443221111110             0000011222334456789999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-40  Score=324.08  Aligned_cols=265  Identities=25%  Similarity=0.351  Sum_probs=198.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||.||+|..+.         +++.||||.+...... ....+.+|+.++++++|+||+++++++..+
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   75 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKL---------TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK   75 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcC---------CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC
Confidence            578999999999999999998765         5779999998754322 224567899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+. ++|.+++......+++..+..++.||+.||.|||+.+   |+||||||+|||++              
T Consensus        76 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~--------------  137 (291)
T cd07844          76 KTLTLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLIS--------------  137 (291)
T ss_pred             CeEEEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEc--------------
Confidence            99999999996 5999998766667899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+++........  .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus       138 -----------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~  204 (291)
T cd07844         138 -----------ERGELKLADFGLARAKSVPSKT--YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLF  204 (291)
T ss_pred             -----------CCCCEEECccccccccCCCCcc--ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence                       4678999999998764322111  122356889999998875 56899999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhcc--cccc---------c----cccC-CccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          367 DKNRPNGEHNLVEWARPHLGE--RRRF---------Y----RLID-PRLEGHF-SIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~--~~~~---------~----~~~~-~~~~~~~-~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      ....... ..+. .....+..  ...+         .    .... ..+.... .......+.+++.+||+.||.+||++
T Consensus       205 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~  282 (291)
T cd07844         205 PGSTDVE-DQLH-KIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISA  282 (291)
T ss_pred             CCCccHH-HHHH-HHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCH
Confidence            6543111 0000 00000000  0000         0    0000 0000000 00012677899999999999999999


Q ss_pred             HHHHHH
Q 010432          430 SEVVEA  435 (511)
Q Consensus       430 ~eil~~  435 (511)
                      .+++++
T Consensus       283 ~e~l~~  288 (291)
T cd07844         283 AEAMKH  288 (291)
T ss_pred             HHHhcC
Confidence            999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=5.5e-40  Score=323.29  Aligned_cols=264  Identities=26%  Similarity=0.342  Sum_probs=203.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+|.+..         +|..||||++.....  .....+.+|+.++++++|+||+++++++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   71 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRE---------TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG   71 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECC---------CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC
Confidence            57888999999999999999865         577999999976542  2235788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+ +++|.+++......+++..++.++.||+.||.|||+++   |+|+||||+||+++              
T Consensus        72 ~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~--------------  133 (286)
T cd07832          72 SGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLIS--------------  133 (286)
T ss_pred             CeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEc--------------
Confidence            9999999999 99999998766667999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 +++.++|+|||++......... ......|+..|+|||++.+. .++.++|||||||++|||++|.++|
T Consensus       134 -----------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~  201 (286)
T cd07832         134 -----------ADGVLKIADFGLARLFSEEEPR-LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLF  201 (286)
T ss_pred             -----------CCCcEEEeeeeecccccCCCCC-ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCc
Confidence                       4677999999999876543321 12235689999999988654 5689999999999999999998888


Q ss_pred             CCCCCCCchhHHHhhhhhhc-----------cccccccccCCccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLG-----------ERRRFYRLIDPRLE----GHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      .......   ........+.           .......+..+...    .....+.+..+.+|+.+||+.||.+||++.+
T Consensus       202 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  278 (286)
T cd07832         202 PGENDIE---QLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE  278 (286)
T ss_pred             CCCCHHH---HHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence            6543211   1111111000           00000000000000    0001123478899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++++
T Consensus       279 ~l~h  282 (286)
T cd07832         279 ALRH  282 (286)
T ss_pred             HhhC
Confidence            9975

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.2e-40  Score=320.77  Aligned_cols=256  Identities=25%  Similarity=0.424  Sum_probs=200.0

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----------cHHHHHHHHHHHhCCCCCCcce
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----------GHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----------~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      +|.+.+.||.|+||.||+|....         +++.||||.++.....          ..+.+.+|+.+++.++|+||++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~---------~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   72 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVT---------TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQ   72 (272)
T ss_pred             ceeecceecccCceEEEEEeecC---------CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcce
Confidence            57788899999999999998765         5779999988642110          1135678999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      +++++...+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++   ++|+||+|+||+++      
T Consensus        73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~------  142 (272)
T cd06629          73 YLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVD------  142 (272)
T ss_pred             EEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEc------
Confidence            999999999999999999999999998654 47899999999999999999999988   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC--CCccccchhHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLL  357 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DIwSlGvil~  357 (511)
                                         .++.++|+|||+++...............|+..|+|||++....  ++.++||||||+++|
T Consensus       143 -------------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~  203 (272)
T cd06629         143 -------------------ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL  203 (272)
T ss_pred             -------------------CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence                               47789999999998654322221223356899999999987654  889999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||++|..||.......  .+...    . .     ......+........+..+.+|+.+||..+|.+||++.+|+++
T Consensus       204 ~l~~g~~p~~~~~~~~--~~~~~----~-~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         204 EMFAGRRPWSDEEAIA--AMFKL----G-N-----KRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHhCCCCCcCcchHH--HHHHh----h-c-----cccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            9999999996432110  00000    0 0     0000111111222335789999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=8.2e-40  Score=318.78  Aligned_cols=252  Identities=25%  Similarity=0.348  Sum_probs=198.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-----ccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .+|++.++||+|+||.||+|.+..         ++..||||.+.....     .....+.+|+.++++++|+||++++++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~---------~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   72 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDAD---------TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGC   72 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcC---------CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeE
Confidence            478899999999999999998865         678999999864321     112467889999999999999999998


Q ss_pred             EEeC--CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +.+.  ..+++||||+++++|.+++... ..+++..++.++.|++.||.|||+++   |+|+||||+|||++        
T Consensus        73 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~--------  140 (265)
T cd06652          73 LRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRD--------  140 (265)
T ss_pred             eccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEec--------
Confidence            8763  4678999999999999998654 45788889999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                       .++.++|+|||+++........ .......|+..|+|||++.+..++.++|||||||++|||+
T Consensus       141 -----------------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  203 (265)
T cd06652         141 -----------------SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML  203 (265)
T ss_pred             -----------------CCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh
Confidence                             4778999999999865332111 0122346899999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|+.||......     ... ..          ..........+...+..+.+++.+||. +|++||++++|+++
T Consensus       204 ~g~~p~~~~~~~-----~~~-~~----------~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         204 TEKPPWAEFEAM-----AAI-FK----------IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             hCCCCCCccchH-----HHH-HH----------HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            999999643211     000 00          000001122334456778899999994 99999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-40  Score=324.53  Aligned_cols=268  Identities=27%  Similarity=0.361  Sum_probs=202.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|.+..         +++.||||+++....  .....+.+|++++++++|+||+++++++..
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~---------~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   71 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKA---------TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR   71 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCC---------CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE
Confidence            368899999999999999998875         577999999875432  223578899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||++++.|..++ .....+++..+..++.||+.||.|||.++   |+|+||+|+||+++             
T Consensus        72 ~~~~~iv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~-------------  134 (288)
T cd07833          72 KGRLYLVFEYVERTLLELLE-ASPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVS-------------  134 (288)
T ss_pred             CCEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEC-------------
Confidence            99999999999876665554 44456899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.+||+|||++......... ......|+..|+|||++.+. .++.++||||||+++|+|++|+.|
T Consensus       135 ------------~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  201 (288)
T cd07833         135 ------------ESGVLKLCDFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPL  201 (288)
T ss_pred             ------------CCCCEEEEeeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence                        4778999999999876554321 12335688999999999887 889999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhcc--------ccccc--cccCCc----cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGE--------RRRFY--RLIDPR----LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~----~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |.....................        ...+.  +.....    +...++...+..+.+||.+||..+|++||++.+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  281 (288)
T cd07833         202 FPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE  281 (288)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHH
Confidence            9754322111000000000000        00000  000000    000112223678999999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      |+.+
T Consensus       282 il~~  285 (288)
T cd07833         282 LLQH  285 (288)
T ss_pred             HhcC
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=5.5e-40  Score=317.98  Aligned_cols=246  Identities=30%  Similarity=0.482  Sum_probs=197.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++.+.||+|+||.||++..           ++..||+|.++...  ....+.+|+.++++++|+||+++++++..+ 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-----------~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-   71 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-----------TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-   71 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-----------CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-
Confidence            5688999999999999999864           46689999987543  235788999999999999999999998654 


Q ss_pred             eEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++||||+++++|.+++.... ..+++..++.++.|++.||.|||+.+   ++||||||+|||++              
T Consensus        72 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~--------------  134 (254)
T cd05083          72 GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVS--------------  134 (254)
T ss_pred             CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEc--------------
Confidence            4799999999999999997543 35889999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 .++.+||+|||++.......     .....+..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus       135 -----------~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~  198 (254)
T cd05083         135 -----------EDGVAKVSDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY  198 (254)
T ss_pred             -----------CCCcEEECCCccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence                       46789999999997643321     12234678999999988899999999999999999998 99999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      .......   ......    ..          .........+..+.+|+.+||+.+|++||++.+|++.|+.
T Consensus       199 ~~~~~~~---~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         199 PKMSLKE---VKECVE----KG----------YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             ccCCHHH---HHHHHh----CC----------CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            7543211   111110    00          0111112235778999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=6.8e-41  Score=358.32  Aligned_cols=255  Identities=29%  Similarity=0.415  Sum_probs=194.1

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .-..+|+.+++||+||||.||+++.+-         .|+.||||+|..... .....+.+|+.+|++|+|||||+||..|
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKl---------DGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAW  546 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKL---------DGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAW  546 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecc---------cchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhh
Confidence            345689999999999999999999987         577999999987642 2234578999999999999999999877


Q ss_pred             EeCC----------------------------------------------------------------------------
Q 010432          205 IEDD----------------------------------------------------------------------------  208 (511)
Q Consensus       205 ~~~~----------------------------------------------------------------------------  208 (511)
                      .+..                                                                            
T Consensus       547 VEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~ded  626 (1351)
T KOG1035|consen  547 VESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDED  626 (1351)
T ss_pred             hccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccc
Confidence            5321                                                                            


Q ss_pred             -------------------------------------------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHH
Q 010432          209 -------------------------------------------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA  245 (511)
Q Consensus       209 -------------------------------------------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi  245 (511)
                                                                 .+||.||||+..+|.+++.++...-.....++++++|
T Consensus       627 g~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreI  706 (1351)
T KOG1035|consen  627 GRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREI  706 (1351)
T ss_pred             ccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHH
Confidence                                                       2389999999877777775543222467788999999


Q ss_pred             HHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCC----------
Q 010432          246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP----------  315 (511)
Q Consensus       246 ~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~----------  315 (511)
                      +.||.|+|++|   ||||||||.||+|+                         .+..|||+|||+|+...          
T Consensus       707 lEGLaYIH~~g---iIHRDLKP~NIFLd-------------------------~~~~VKIGDFGLAt~~~~~~~~~d~~~  758 (1351)
T KOG1035|consen  707 LEGLAYIHDQG---IIHRDLKPRNIFLD-------------------------SRNSVKIGDFGLATDLKENLESIDQDL  758 (1351)
T ss_pred             HHHHHHHHhCc---eeeccCCcceeEEc-------------------------CCCCeeecccccchhhhhhhhhHhhcc
Confidence            99999999999   99999999999999                         47789999999998721          


Q ss_pred             ------CCCcceeeeeccccccccCCcccccC---CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhc
Q 010432          316 ------EGDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG  386 (511)
Q Consensus       316 ------~~~~~~~~~~~~Gt~~y~aPE~~~~~---~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~  386 (511)
                            .+......+..+||.-|+|||++.+.   .|+.|+|+|||||||+||+.   ||....+.  ...+..      
T Consensus       759 ~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER--a~iL~~------  827 (1351)
T KOG1035|consen  759 SFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER--ASILTN------  827 (1351)
T ss_pred             CccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHH--HHHHHh------
Confidence                  01111134567899999999998754   59999999999999999995   56543211  111110      


Q ss_pred             cccccccccCCccC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          387 ERRRFYRLIDPRLE--GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       387 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                             +-+..++  ..+..+..+.-..+|.+||+.||.+||||.|+|+.
T Consensus       828 -------LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  828 -------LRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             -------cccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence                   1111111  22333344566789999999999999999999974

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=6.9e-40  Score=323.89  Aligned_cols=266  Identities=24%  Similarity=0.327  Sum_probs=199.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      +.+|.+.+.||+|+||.||+|....         ++..||||++....... ...+.+|+.+++.++|+||+++++++..
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~   74 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRI---------NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT   74 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcC---------CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec
Confidence            4679999999999999999998865         57799999997553322 2457789999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||+. ++|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++             
T Consensus        75 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~-------------  137 (291)
T cd07870          75 KETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLIS-------------  137 (291)
T ss_pred             CCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEc-------------
Confidence            999999999995 7888877665556888889999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+++........  .....+++.|+|||++.+ ..++.++|||||||++|||++|..|
T Consensus       138 ------------~~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  203 (291)
T cd07870         138 ------------YLGELKLADFGLARAKSIPSQT--YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPA  203 (291)
T ss_pred             ------------CCCcEEEeccccccccCCCCCC--CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                        4678999999999865432221  223457899999999875 4578899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhc-----------cccccccc-cCCccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLG-----------ERRRFYRL-IDPRLEGHF-----SIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |........ .+.. ......           ........ .........     ....+..+.+|+.+||+.||.+|||
T Consensus       204 f~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t  281 (291)
T cd07870         204 FPGVSDVFE-QLEK-IWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS  281 (291)
T ss_pred             CCCchhHHH-HHHH-HHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC
Confidence            975433111 1110 000000           00000000 000000000     0011467889999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.+++.+
T Consensus       282 ~~~~l~h  288 (291)
T cd07870         282 AQDALLH  288 (291)
T ss_pred             HHHHhcC
Confidence            9999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.4e-39  Score=316.87  Aligned_cols=257  Identities=26%  Similarity=0.379  Sum_probs=205.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||.|+||+||+|.+..         ++..||+|++...... ....+.+|+.+|+.++|+||+++++.+..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLP---------NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG   71 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcC---------CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC
Confidence            478999999999999999998765         5678999999755432 345788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +..++||||+++++|.+++...  ...+++..+..++.||+.||.|||+++   |+|+||||+||+++            
T Consensus        72 ~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~------------  136 (267)
T cd06610          72 DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLG------------  136 (267)
T ss_pred             CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEc------------
Confidence            9999999999999999999653  246899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg  362 (511)
                                   ++..++|+|||++..........  ......|+..|+|||++... .++.++|||||||++|||++|
T Consensus       137 -------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g  203 (267)
T cd06610         137 -------------EDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG  203 (267)
T ss_pred             -------------CCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhC
Confidence                         46779999999998765533221  22335689999999998876 789999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF-SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||.......  ........           ..+.+.... ....+..+.+|+.+||+.||++||++.+|+++
T Consensus       204 ~~p~~~~~~~~--~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         204 AAPYSKYPPMK--VLMLTLQN-----------DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             CCCccccChhh--hHHHHhcC-----------CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            99997543321  11111110           001111110 12345778999999999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=2.8e-41  Score=313.95  Aligned_cols=277  Identities=22%  Similarity=0.284  Sum_probs=204.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..|+++..||+|.||.||+|...+.+.     ...+.+|||.++....  .-.....+|+.+++.|+|+|||.|..+|..
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~-----kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~   98 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTND-----KRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS   98 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCc-----ccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc
Confidence            468899999999999999997654321     1244899999986532  112457899999999999999999999887


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFR----RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                       +..++|++||.+. ||.+.|+-    ....++...+..|+.||+.|+.|||++.   |+||||||.|||+...+.    
T Consensus        99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgp----  170 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGP----  170 (438)
T ss_pred             cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCC----
Confidence             7789999999976 99988852    2346889999999999999999999998   999999999999986432    


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccC-CCCccccchhHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~el  359 (511)
                                       +.+.|||+|||+++...+.-... ....++-|.+|+|||++.+. .|+.+.||||.|||+.||
T Consensus       171 -----------------erG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaEl  233 (438)
T KOG0666|consen  171 -----------------ERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAEL  233 (438)
T ss_pred             -----------------ccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHH
Confidence                             46899999999999876644332 23346779999999999875 689999999999999999


Q ss_pred             HhCCCCCCCCCCCCc-------hhHHHhhhhhh-----------ccccccccccC---CccCCCCCH--------HHHHH
Q 010432          360 LTGRRSMDKNRPNGE-------HNLVEWARPHL-----------GERRRFYRLID---PRLEGHFSI--------KGAQK  410 (511)
Q Consensus       360 ltg~~pf~~~~~~~~-------~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~--------~~~~~  410 (511)
                      +|-.+.|.+......       ..+.. +...+           .........+.   .........        .-++.
T Consensus       234 Ltl~PlF~g~E~k~~~~~Pfq~dQl~r-If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~  312 (438)
T KOG0666|consen  234 LTLEPLFKGREEKIKTKNPFQHDQLDR-IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS  312 (438)
T ss_pred             HccCccccchhhhcccCCCchHHHHHH-HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence            999999976433211       11111 11111           00011100000   000000000        01244


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          411 AAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       411 ~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..+|+.+||.+||.+|.|+.+.+++.
T Consensus       313 a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  313 ALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHHHHHhccCchhhccHHHHhccc
Confidence            78999999999999999999999865

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1e-39  Score=317.04  Aligned_cols=250  Identities=23%  Similarity=0.335  Sum_probs=202.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      +|++.+.||.|+||.||+|.+..         ++..||+|++......  ..+.+..|+.++++++|+||+++++++.. 
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKS---------DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR   71 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecC---------CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC
Confidence            47888999999999999998865         5779999999765432  23468889999999999999999998764 


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCCeEecccCCCcEEeccccc
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLH-----EEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH-----~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                       +...+++|||+++++|.+++...   ...+++..++.++.||+.||.|||     +.+   |+|+||||+||+++    
T Consensus        72 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~----  144 (265)
T cd08217          72 SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLD----  144 (265)
T ss_pred             CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEe----
Confidence             45678999999999999998643   457899999999999999999999     666   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           +++.+||+|||++.........  .....|+..|+|||++.+..++.++||||||+++|
T Consensus       145 ---------------------~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~  201 (265)
T cd08217         145 ---------------------ANNNVKLGDFGLAKILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIY  201 (265)
T ss_pred             ---------------------cCCCEEEecccccccccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHH
Confidence                                 4788999999999876543321  22356899999999999888999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|++|+.||.....   ..+.....              ......++...+..+.+|+.+||+.+|++||++.+|+++
T Consensus       202 ~l~~g~~p~~~~~~---~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         202 ELCALSPPFTARNQ---LQLASKIK--------------EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHCCCcccCcCH---HHHHHHHh--------------cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            99999999975431   11111111              000112223345788999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-40  Score=328.05  Aligned_cols=253  Identities=28%  Similarity=0.357  Sum_probs=201.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|....         +++.||||.+......   ....+.+|+++++.++|+||+++++++.
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   71 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKG---------TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ   71 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcC---------CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee
Confidence            368889999999999999998865         5779999999865433   2346888999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .....|+||||+.+++|.+++... ...+++..+..++.||+.||+|||+.+   |+|+||||+|||++           
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~-----------  137 (316)
T cd05574          72 TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLH-----------  137 (316)
T ss_pred             cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEc-----------
Confidence            999999999999999999998653 356899999999999999999999988   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcc---------------------------eeeeeccccccccCCcc
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---------------------------HVSTRVMGTYGYAAPEY  337 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---------------------------~~~~~~~Gt~~y~aPE~  337 (511)
                                    .++.++|+|||++.........                           .......||..|+|||+
T Consensus       138 --------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~  203 (316)
T cd05574         138 --------------ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEV  203 (316)
T ss_pred             --------------CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHH
Confidence                          4678999999998754322110                           01113468999999999


Q ss_pred             cccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHH
Q 010432          338 VMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH  417 (511)
Q Consensus       338 ~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~  417 (511)
                      +.+..++.++|||||||++|+|++|..||.......  .+..              +.............+..+.+|+.+
T Consensus       204 ~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~  267 (316)
T cd05574         204 ISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE--TFSN--------------ILKKEVTFPGSPPVSSSARDLIRK  267 (316)
T ss_pred             HcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH--HHHH--------------HhcCCccCCCccccCHHHHHHHHH
Confidence            998889999999999999999999999997543211  1100              010000000111146789999999


Q ss_pred             hcccCCCCCCC----HHHHHH
Q 010432          418 CLSRDPKARPL----MSEVVE  434 (511)
Q Consensus       418 cl~~dP~~RPs----~~eil~  434 (511)
                      ||+.||++||+    +.++++
T Consensus       268 ~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         268 LLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HccCCHhHCCCchhhHHHHHc
Confidence            99999999999    666665

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.1e-39  Score=317.82  Aligned_cols=252  Identities=28%  Similarity=0.466  Sum_probs=199.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      +|++.+.||.|+||.||+|...          ++..||||.+......      ....+.+|+.+|++++|+||++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~----------~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   70 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN----------QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGT   70 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc----------CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeE
Confidence            4788899999999999999753          4678999998754321      12357889999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +...+..++||||+++++|.+++.+. ..+++..+..++.||+.||+|||+.+   |+|+||||+||+++          
T Consensus        71 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~----------  136 (265)
T cd06631          71 CLDDNTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLM----------  136 (265)
T ss_pred             eecCCeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEEC----------
Confidence            99999999999999999999999654 46889999999999999999999988   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCC----cceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~----~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                     .++.++|+|||++.......    .........|+..|+|||++.+..++.++|||||||++|+|
T Consensus       137 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l  201 (265)
T cd06631         137 ---------------PNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM  201 (265)
T ss_pred             ---------------CCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHH
Confidence                           47789999999997643211    11112235689999999999988899999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ++|..||........  ....     ....    ...+    ..+...+..+.++|.+||+.+|.+||++.+++++
T Consensus       202 ~~g~~p~~~~~~~~~--~~~~-----~~~~----~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         202 ATGKPPLASMDRLAA--MFYI-----GAHR----GLMP----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             HhCCCccccCChHHH--HHHh-----hhcc----CCCC----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            999999975322111  0000     0000    0001    1122335778999999999999999999999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.7e-41  Score=341.29  Aligned_cols=246  Identities=24%  Similarity=0.383  Sum_probs=196.7

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC----cccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG----LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      ..+||+|+|-+||+|.+..         +|..||--.++...    ....++|..|+.+|+.|+|+|||++|++|.+...
T Consensus        45 ~evLGrGafKtVYka~De~---------~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n  115 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEE---------EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN  115 (632)
T ss_pred             hhhcccccceeeeeccccc---------cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC
Confidence            3579999999999999865         67788865554332    2234679999999999999999999999998665


Q ss_pred             --EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          210 --RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       210 --~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                        +-+|+|++..|+|..|+.+. +.++...+..|++||+.||.|||++. +||||||||.+||+|+.             
T Consensus       116 ~~in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG-------------  180 (632)
T KOG0584|consen  116 KTINFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNG-------------  180 (632)
T ss_pred             ceeeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcC-------------
Confidence              67899999999999999554 57889999999999999999999987 88999999999999986             


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 ..+.|||+|+|||.......    ...++|||.|||||+.. ..|+..+||||||+.|+||+|+..||.
T Consensus       181 -----------~~G~VKIGDLGLAtl~r~s~----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs  244 (632)
T KOG0584|consen  181 -----------NLGEVKIGDLGLATLLRKSH----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS  244 (632)
T ss_pred             -----------CcCceeecchhHHHHhhccc----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh
Confidence                       57889999999999865432    23378999999999776 899999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....     .+..+          +......+..+.....+++++||.+||.. ..+|||+.|+|++
T Consensus       245 EC~n~-----AQIYK----------KV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  245 ECTNP-----AQIYK----------KVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             hhCCH-----HHHHH----------HHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            43221     11111          01111111112222257899999999999 9999999999974

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=3.9e-40  Score=326.13  Aligned_cols=249  Identities=26%  Similarity=0.375  Sum_probs=199.5

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      |.....||+|+||.||++.+..         ++..||||.+........+.+.+|+.+++.++|+||+++++.+..++..
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~   94 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKH---------TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL   94 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECC---------CCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE
Confidence            4444679999999999998765         5779999998765544456788999999999999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++++|.+++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus        95 ~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~-----------------  152 (292)
T cd06658          95 WVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLT-----------------  152 (292)
T ss_pred             EEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEc-----------------
Confidence            999999999999998843  35889999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              +++.+||+|||++........  ......|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       153 --------~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  222 (292)
T cd06658         153 --------SDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP  222 (292)
T ss_pred             --------CCCCEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                    467899999999976533221  1223568999999999988889999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...   ......          ....+.+..  ....+..+.+++.+||..||.+|||+.+++++
T Consensus       223 ~~~---~~~~~~----------~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         223 PLQ---AMRRIR----------DNLPPRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHH---HHHHHH----------hcCCCcccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            211   010000          011111111  11234678899999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=9.3e-40  Score=325.37  Aligned_cols=256  Identities=23%  Similarity=0.315  Sum_probs=200.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||++.+..         +++.||||.+.....   .....+.+|+.+++.++|+||+++++.+.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~---------~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   71 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKE---------TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE   71 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECC---------CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe
Confidence            368889999999999999999875         677999999876532   22346778999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..++||||+++++|.+++... ..+++..+..++.|++.||.|||+++   |+||||||+|||++            
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~------------  135 (305)
T cd05609          72 TKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLIT------------  135 (305)
T ss_pred             cCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEEC------------
Confidence            999999999999999999999654 46899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCc-------------ceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK-------------THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~-------------~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                                   .++.+||+|||+++.......             ........|+..|+|||++.+..++.++|||||
T Consensus       136 -------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  202 (305)
T cd05609         136 -------------SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAM  202 (305)
T ss_pred             -------------CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHH
Confidence                         477899999999874211100             001112467889999999988899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ||++|||++|..||.+....   .+....   ...     ....+...    ...+..+.+||.+||+.||++||++.++
T Consensus       203 G~vl~el~~g~~pf~~~~~~---~~~~~~---~~~-----~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~  267 (305)
T cd05609         203 GIILYEFLVGCVPFFGDTPE---ELFGQV---ISD-----DIEWPEGD----EALPADAQDLISRLLRQNPLERLGTGGA  267 (305)
T ss_pred             HHHHHHHHhCCCCCCCCCHH---HHHHHH---Hhc-----ccCCCCcc----ccCCHHHHHHHHHHhccChhhccCccCH
Confidence            99999999999999754321   111100   000     00001000    1235678999999999999999997666


Q ss_pred             HHHhc
Q 010432          433 VEALK  437 (511)
Q Consensus       433 l~~L~  437 (511)
                      ++.|+
T Consensus       268 ~~ll~  272 (305)
T cd05609         268 FEVKQ  272 (305)
T ss_pred             HHHHh
Confidence            66554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.1e-39  Score=323.52  Aligned_cols=264  Identities=25%  Similarity=0.320  Sum_probs=200.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-----cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-----GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      +|++.+.||+|+||.||+|.+..         +++.||||.+......     ....+..|+.++++++|+||+++++++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKE---------TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF   71 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECC---------CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee
Confidence            47788899999999999999865         5779999999765433     224567899999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++||||+ +|+|.+++......+++..++.++.||+.||.|||+++   |+|+||||+|||++           
T Consensus        72 ~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~-----------  136 (298)
T cd07841          72 GHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIA-----------  136 (298)
T ss_pred             ecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEc-----------
Confidence            9999999999999 99999999665447899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~  363 (511)
                                    .++.+||+|||+++........  .....+++.|+|||++.+ ..++.++|||||||++|||++|.
T Consensus       137 --------------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~  200 (298)
T cd07841         137 --------------SDGVLKLADFGLARSFGSPNRK--MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV  200 (298)
T ss_pred             --------------CCCCEEEccceeeeeccCCCcc--ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence                          4778999999999876543221  222356889999998864 46789999999999999999998


Q ss_pred             CCCCCCCCCCchhHHHhhhhh-------hccccccccccCCccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPH-------LGERRRFYRLIDPRLEG-----HFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ++|........  +.......       +................     ......+..+.+||.+||+.||++|||+.+
T Consensus       201 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e  278 (298)
T cd07841         201 PFLPGDSDIDQ--LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ  278 (298)
T ss_pred             ccccCCccHHH--HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence            88865433211  11110000       00000000000000000     011223578899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      |+++
T Consensus       279 ~l~~  282 (298)
T cd07841         279 ALEH  282 (298)
T ss_pred             HhhC
Confidence            9984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=7.8e-40  Score=317.02  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=202.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+++...         +++.||||.+.....  ....++.+|+.++++++|+||+++++++...
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKE---------DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN   71 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcC---------CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC
Confidence            58888999999999999998865         577999999875432  2335688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+.+++|.+++... ...+++..++.++.|++.||.|||+++   ++|+||+|+|||++             
T Consensus        72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~-------------  135 (256)
T cd08218          72 GNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLT-------------  135 (256)
T ss_pred             CeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEc-------------
Confidence            9999999999999999998653 345789999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .+..++|+|||++.........  .....|++.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       136 ------------~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~  201 (256)
T cd08218         136 ------------KDGTIKLGDFGIARVLNSTVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAF  201 (256)
T ss_pred             ------------CCCCEEEeeccceeecCcchhh--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCc
Confidence                        4677999999999865443221  12346889999999998888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......   .   ........          . ....+...+..+.++|.+||+.+|.+||++.+|+++
T Consensus       202 ~~~~~~---~---~~~~~~~~----------~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         202 EAGNMK---N---LVLKIIRG----------S-YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             cCCCHH---H---HHHHHhcC----------C-CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            643211   1   11110000          0 011122335678999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=8.3e-40  Score=323.32  Aligned_cols=261  Identities=29%  Similarity=0.368  Sum_probs=202.6

Q ss_pred             ChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcc
Q 010432          120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLV  198 (511)
Q Consensus       120 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv  198 (511)
                      .+.++....++|++.+.||+|+||.||+|....         +++.||+|++..... ....+.+|+.++.++ +|+||+
T Consensus        13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~---------~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~   82 (291)
T cd06639          13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKK---------DGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVV   82 (291)
T ss_pred             hcccCCCCCCCeEEEEEeecCCCeEEEEEEECC---------CCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeE
Confidence            334444567889999999999999999998865         677999999865422 235677899999999 899999


Q ss_pred             eEeeEEEeC-----CeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          199 KLIGYCIED-----DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       199 ~l~~~~~~~-----~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                      ++++++...     ...++||||+++|+|.+++..   ....+++..++.++.|++.||.|||+.+   |+||||||+||
T Consensus        83 ~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~ni  159 (291)
T cd06639          83 KFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNI  159 (291)
T ss_pred             EEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHE
Confidence            999998754     358999999999999998853   3456899999999999999999999988   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-----CCCc
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-----HLTS  345 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----~~~~  345 (511)
                      |++                         +++.+||+|||++.........  .....|+..|+|||++...     .++.
T Consensus       160 li~-------------------------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~  212 (291)
T cd06639         160 LLT-------------------------TEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDA  212 (291)
T ss_pred             EEc-------------------------CCCCEEEeecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCC
Confidence            998                         4677999999999875432221  2234689999999987643     3688


Q ss_pred             cccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC
Q 010432          346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       346 ~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      ++|||||||++|||++|+.||......  ..+..+...           ..+.+  ..+......+.+||.+||+.||++
T Consensus       213 ~~Di~slGvi~~el~~g~~p~~~~~~~--~~~~~~~~~-----------~~~~~--~~~~~~~~~l~~li~~~l~~~p~~  277 (291)
T cd06639         213 RCDVWSLGITAIELGDGDPPLFDMHPV--KTLFKIPRN-----------PPPTL--LHPEKWCRSFNHFISQCLIKDFEA  277 (291)
T ss_pred             ccchHHHHHHHHHHhhCCCCCCCCcHH--HHHHHHhcC-----------CCCCC--CcccccCHHHHHHHHHHhhcChhh
Confidence            999999999999999999999754321  111111000           00000  011223457899999999999999


Q ss_pred             CCCHHHHHHH
Q 010432          426 RPLMSEVVEA  435 (511)
Q Consensus       426 RPs~~eil~~  435 (511)
                      ||++.+|+++
T Consensus       278 Rps~~~il~~  287 (291)
T cd06639         278 RPSVTHLLEH  287 (291)
T ss_pred             CcCHHHHhcC
Confidence            9999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.1e-39  Score=320.90  Aligned_cols=251  Identities=27%  Similarity=0.392  Sum_probs=194.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHH-HhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNF-LGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~i-l~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|.+..         +|..||||+++.... .....+..|+.+ ++.++|+||+++++++..
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~   71 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVP---------TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR   71 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcC---------CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec
Confidence            368899999999999999999875         678999999976532 223456667765 566799999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCC
Q 010432          207 DDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++..++||||++ |+|.+++..   ....+++..++.++.||+.||+|||++ +   |+||||||+|||++         
T Consensus        72 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~---------  138 (283)
T cd06617          72 EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLIN---------  138 (283)
T ss_pred             CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEEC---------
Confidence            999999999995 688887753   234689999999999999999999986 7   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc----CCCCccccchhHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~----~~~~~~~DIwSlGvil~e  358 (511)
                                      .++.+||+|||++.......   ..+...|+..|+|||++.+    ..++.++|||||||++|+
T Consensus       139 ----------------~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~  199 (283)
T cd06617         139 ----------------RNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE  199 (283)
T ss_pred             ----------------CCCCEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence                            47789999999998654321   1223468999999998864    457889999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |++|+.||...... ...+...    ..       ...+.+.   ....+..+.+||.+||..+|.+||++.+|+++
T Consensus       200 l~~g~~p~~~~~~~-~~~~~~~----~~-------~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         200 LATGRFPYDSWKTP-FQQLKQV----VE-------EPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHhCCCCCCccccC-HHHHHHH----Hh-------cCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            99999999642211 0111000    00       0000010   11235678999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=6.4e-40  Score=319.16  Aligned_cols=254  Identities=29%  Similarity=0.396  Sum_probs=204.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|+..+.||.|+||.||+|.+..         +++.||+|.+..... .....+.+|++++++++||||+++++++...
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   71 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRP---------TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN   71 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcC---------CCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC
Confidence            367788899999999999999865         577999999976543 2345688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++......+++..+..++.|++.||+|||+ .+   ++|+||||+||+++             
T Consensus        72 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~-------------  135 (265)
T cd06605          72 GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVN-------------  135 (265)
T ss_pred             CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEEC-------------
Confidence            99999999999999999997655678999999999999999999999 88   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +++.++|+|||++........    ....|+..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       136 ------------~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~  199 (265)
T cd06605         136 ------------SRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPY  199 (265)
T ss_pred             ------------CCCCEEEeecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                        467899999999876543221    1156899999999999889999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI-KGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ........ ............       .    ....+. ..+..+.+||.+||..||.+||++.+++.+
T Consensus       200 ~~~~~~~~-~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         200 PPENDPPD-GIFELLQYIVNE-------P----PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             Cccccccc-cHHHHHHHHhcC-------C----CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            65422111 111111111100       0    011111 146778999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.3e-39  Score=322.21  Aligned_cols=267  Identities=25%  Similarity=0.348  Sum_probs=201.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||.|+||.||+|.+..         +++.||||.++.....  ....+.+|+.++++++||||+++++++..
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~   75 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKK---------TGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVG   75 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECC---------CCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEe
Confidence            478889999999999999999865         5779999999754322  22356789999999999999999999987


Q ss_pred             C--CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 D--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 ~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .  ...||||||+. ++|.+++......+++..++.++.||+.||+|||+++   |+|+||||+|||++           
T Consensus        76 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~-----------  140 (293)
T cd07843          76 SNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLN-----------  140 (293)
T ss_pred             cCCCcEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEEC-----------
Confidence            7  88999999996 5999988765557899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~  363 (511)
                                    .++.+||+|||+++........  .....+++.|+|||++.+. .++.++|||||||++|||++|.
T Consensus       141 --------------~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  204 (293)
T cd07843         141 --------------NRGILKICDFGLAREYGSPLKP--YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK  204 (293)
T ss_pred             --------------CCCcEEEeecCceeeccCCccc--cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCC
Confidence                          4678999999999876553211  2234578899999988754 4689999999999999999999


Q ss_pred             CCCCCCCCCCchhHH-Hhhh-------hhhccc-----cccccccCCccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCH
Q 010432          364 RSMDKNRPNGEHNLV-EWAR-------PHLGER-----RRFYRLIDPRLEGHFSIK-GAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~-~~~~-------~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      .||...........+ ....       ......     ..........+...++.. .++.+.+||.+||+.||++|||+
T Consensus       205 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~  284 (293)
T cd07843         205 PLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA  284 (293)
T ss_pred             CCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH
Confidence            999754332111100 0000       000000     000000001111112221 35678999999999999999999


Q ss_pred             HHHHHH
Q 010432          430 SEVVEA  435 (511)
Q Consensus       430 ~eil~~  435 (511)
                      .|++++
T Consensus       285 ~ell~~  290 (293)
T cd07843         285 EDALKH  290 (293)
T ss_pred             HHHhcC
Confidence            999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.8e-40  Score=324.75  Aligned_cols=249  Identities=24%  Similarity=0.373  Sum_probs=199.6

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      |.....||+|+||.||+|.+..         ++..||||.+........+.+.+|+.++..++||||+++++++..++..
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~   93 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKH---------SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEEL   93 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcC---------CCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeE
Confidence            3344579999999999998765         5779999999765545556788999999999999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++++|..++..  ..+++..++.++.|++.||.|||+++   |+||||||+|||++                 
T Consensus        94 ~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~-----------------  151 (297)
T cd06659          94 WVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLT-----------------  151 (297)
T ss_pred             EEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEc-----------------
Confidence            999999999999987744  35889999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||++.........  .....|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       152 --------~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  221 (297)
T cd06659         152 --------LDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS  221 (297)
T ss_pred             --------cCCcEEEeechhHhhccccccc--ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                    4778999999999755432211  223568999999999998899999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...   ........   .       .+..  ......+..+.++|.+||+.+|.+||++.+|+++
T Consensus       222 ~~~---~~~~~~~~---~-------~~~~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         222 PVQ---AMKRLRDS---P-------PPKL--KNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHH---HHHHHhcc---C-------CCCc--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            211   11111000   0       0000  0011224678899999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.4e-39  Score=321.78  Aligned_cols=246  Identities=28%  Similarity=0.392  Sum_probs=201.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||++.+..         +++.||+|++.....   .....+.+|+++|++++||||+++++++.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKG---------SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ   71 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE
Confidence            368899999999999999999875         577999999975432   22356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+   |+|+||+|+|||++            
T Consensus        72 ~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~------------  135 (290)
T cd05580          72 DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLD------------  135 (290)
T ss_pred             cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEC------------
Confidence            999999999999999999998654 57899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||++......     .....|++.|+|||.+.+..++.++||||||+++|+|++|..|
T Consensus       136 -------------~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  197 (290)
T cd05580         136 -------------SDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPP  197 (290)
T ss_pred             -------------CCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence                         4778999999999876543     2235689999999999888899999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      |......   ......   ...            ...++...+..+.+++.+||..||.+|+     ++.+++++
T Consensus       198 ~~~~~~~---~~~~~~---~~~------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         198 FFDDNPI---QIYEKI---LEG------------KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             CCCCCHH---HHHHHH---hcC------------CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence            9754311   111000   000            0011122357789999999999999999     66666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-41  Score=358.12  Aligned_cols=258  Identities=24%  Similarity=0.294  Sum_probs=211.5

Q ss_pred             HHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcc
Q 010432          122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       122 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv  198 (511)
                      .++....++|+++++||+|+||.|.+++++.         |++.||+|++++...   ....-|..|-.||..-+.+.||
T Consensus        68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~---------t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv  138 (1317)
T KOG0612|consen   68 KELRLKAEDFEILKVIGRGAFGEVALVRHKS---------TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIV  138 (1317)
T ss_pred             HHHhCCHHhhHHHHHhcccccceeEEEEeec---------cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHH
Confidence            4455667899999999999999999999986         788999999987422   2224588899999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      +|+..|+++.++||||||++||||..++.+-. .+++..++.|+..|+.||.-||+.|   +|||||||+|||||     
T Consensus       139 ~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld-----  209 (1317)
T KOG0612|consen  139 QLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLD-----  209 (1317)
T ss_pred             HHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEec-----
Confidence            99999999999999999999999999997665 8999999999999999999999999   99999999999999     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc----c-CCCCccccchhHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM----T-GHLTSRSDVYSFG  353 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~----~-~~~~~~~DIwSlG  353 (511)
                                          ..+++||+|||.+-.+..... ..+...+|||.|++||++.    + +.|+..+|+||+|
T Consensus       210 --------------------~~GHikLADFGsClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlG  268 (1317)
T KOG0612|consen  210 --------------------KSGHIKLADFGSCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLG  268 (1317)
T ss_pred             --------------------ccCcEeeccchhHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhH
Confidence                                489999999999987765433 3455678999999999986    3 6799999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS--IKGAQKAAQLAAHCLSRDPKARPL---  428 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Li~~cl~~dP~~RPs---  428 (511)
                      |++|||+.|..||+....      +....          .+++..-...||  .+.++++++||.+.+. +|+.|..   
T Consensus       269 V~~YEMlyG~TPFYadsl------veTY~----------KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrng  331 (1317)
T KOG0612|consen  269 VFMYEMLYGETPFYADSL------VETYG----------KIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNG  331 (1317)
T ss_pred             HHHHHHHcCCCcchHHHH------HHHHH----------HHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhccccc
Confidence            999999999999985432      11111          111111111122  2357889999999885 7888887   


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.++..|
T Consensus       332 iedik~H  338 (1317)
T KOG0612|consen  332 IEDIKNH  338 (1317)
T ss_pred             HHHHHhC
Confidence            8877664

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.6e-40  Score=323.98  Aligned_cols=267  Identities=28%  Similarity=0.358  Sum_probs=200.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.++||+|+||.||+|.+..         +++.||+|++......  ..+.+.+|+++++.++|+||+++++++..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   71 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKE---------TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR   71 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECC---------CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc
Confidence            368889999999999999999865         5779999998654322  23567899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||+++++|..+... ...+++..++.++.||+.||.|||+.+   |+|+||+|+||+++             
T Consensus        72 ~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~-------------  134 (286)
T cd07846          72 KKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVS-------------  134 (286)
T ss_pred             CCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEC-------------
Confidence            9999999999999888877643 345899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.++|+|||++........  ......|+..|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus       135 ------------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~  200 (286)
T cd07846         135 ------------QSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPL  200 (286)
T ss_pred             ------------CCCcEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCC
Confidence                        477899999999987544322  1233568899999998875 4578899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhcccc-c-------cccccCCccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERR-R-------FYRLIDPRLEG-----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~-----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |..........-.......+.... .       ......+....     ......+..+.+|+.+||+.+|++||++.+|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  280 (286)
T cd07846         201 FPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL  280 (286)
T ss_pred             CCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH
Confidence            965432110000000000000000 0       00000000000     0011235678999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       281 l~~  283 (286)
T cd07846         281 LHH  283 (286)
T ss_pred             hcC
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.5e-39  Score=314.90  Aligned_cols=249  Identities=29%  Similarity=0.431  Sum_probs=200.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-----ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      +|+..+.||+|+||.||+|....         ++..||+|.+.....     ...+.+.+|+.+++.++|+||+++++++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLD---------DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE   71 (258)
T ss_pred             CccccceeeecCCceEEEEEEcC---------CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE
Confidence            47778899999999999998864         567999999865432     1235688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..+...++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+   |+|+||+|+||+++           
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~-----------  136 (258)
T cd06632          72 REEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVD-----------  136 (258)
T ss_pred             ecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC-----------
Confidence            9999999999999999999998654 46889999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC-CCccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DIwSlGvil~elltg~  363 (511)
                                    .++.+||+|||++.......   ......|+..|+|||.+.... ++.++|+|||||++|+|++|+
T Consensus       137 --------------~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~  199 (258)
T cd06632         137 --------------TNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK  199 (258)
T ss_pred             --------------CCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence                          47789999999998754432   123456899999999987666 899999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .||......  .......     ....         ...++...+..+.+|+.+||+.+|.+||++.+++.+
T Consensus       200 ~pf~~~~~~--~~~~~~~-----~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         200 PPWSQLEGV--AAVFKIG-----RSKE---------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             CCcccCcHH--HHHHHHH-----hccc---------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            999754311  0010000     0000         011122235778999999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-39  Score=317.17  Aligned_cols=254  Identities=29%  Similarity=0.399  Sum_probs=200.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|.+..         ++..||+|++..... ....+.+|+.+++++ .|+||+++++++.
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   73 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKK---------TGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFI   73 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECC---------CCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEE
Confidence            35789999999999999999999865         567999999876543 235688999999999 7999999999997


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      ...      ..++||||+++++|.+++...   ...+++..+..++.|++.||.|||+++   |+|+||+|+||+++   
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~---  147 (275)
T cd06608          74 KKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLT---  147 (275)
T ss_pred             ecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEc---
Confidence            644      489999999999999988642   357899999999999999999999998   99999999999998   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----CCCCccccchh
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYS  351 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DIwS  351 (511)
                                            +++.+||+|||++........  ......|+..|+|||++..     ..++.++||||
T Consensus       148 ----------------------~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s  203 (275)
T cd06608         148 ----------------------KNAEVKLVDFGVSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWS  203 (275)
T ss_pred             ----------------------cCCeEEECCCccceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHH
Confidence                                  477899999999976543221  1223568999999998753     35778999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |||+||+|++|..||......  ..+.....           ...+  ....+...+..+.+|+.+||..||.+|||+.+
T Consensus       204 lG~il~~l~~g~~p~~~~~~~--~~~~~~~~-----------~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~  268 (275)
T cd06608         204 LGITAIELADGKPPLCDMHPM--RALFKIPR-----------NPPP--TLKSPENWSKKFNDFISECLIKNYEQRPFMEE  268 (275)
T ss_pred             hHHHHHHHHhCCCCccccchH--HHHHHhhc-----------cCCC--CCCchhhcCHHHHHHHHHHhhcChhhCcCHHH
Confidence            999999999999999643221  11111100           0000  01112234578899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      |+++
T Consensus       269 ll~~  272 (275)
T cd06608         269 LLEH  272 (275)
T ss_pred             HhcC
Confidence            9874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2.9e-39  Score=320.02  Aligned_cols=251  Identities=24%  Similarity=0.347  Sum_probs=203.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|.+.+.||+|+||.||++....         ++..||+|.+........+.+.+|+.++++++||||+++++++...+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~   89 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVA---------TGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD   89 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcC---------CCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC
Confidence            689999999999999999998754         56789999987654444567889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++|+||+++++|.+++...  .+++..+..++.|++.||.|||+++   ++||||||+||+++               
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~---------------  149 (293)
T cd06647          90 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLG---------------  149 (293)
T ss_pred             cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEc---------------
Confidence            999999999999999998543  5788899999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                +++.+||+|||++.........  .....|++.|+|||++....++.++|||||||++|+|++|+.||..
T Consensus       150 ----------~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~  217 (293)
T cd06647         150 ----------MDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (293)
T ss_pred             ----------CCCCEEEccCcceecccccccc--cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                      4678999999998765443221  2234689999999999888899999999999999999999999975


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .........  ..   .          ........+...+..+.+|+.+||+.+|.+||++.+++.+
T Consensus       218 ~~~~~~~~~--~~---~----------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         218 ENPLRALYL--IA---T----------NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             CChhhheee--hh---c----------CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            433211000  00   0          0000001112235678899999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-40  Score=337.67  Aligned_cols=268  Identities=28%  Similarity=0.396  Sum_probs=201.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC-
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED-  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~-  207 (511)
                      .+...+.||+|+||.||+|+++.         +|+.||||.++.... ...+.+.+|+++|++|+|+|||+++++-... 
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnke---------tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~   84 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKE---------TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKF   84 (732)
T ss_pred             ceeehhhhcCCccceeeeecccc---------cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccc
Confidence            34556789999999999999876         899999999987543 3446788999999999999999999875443 


Q ss_pred             -----CeEEEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          208 -----DQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       208 -----~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                           ....+|||||.+|||...|.+.  ...+++...+.++.+++.||.|||+++   ||||||||.||++-...+   
T Consensus        85 ~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Ged---  158 (732)
T KOG4250|consen   85 LGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGED---  158 (732)
T ss_pred             cCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCC---
Confidence                 3467999999999999999753  567999999999999999999999999   999999999999963211   


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~el  359 (511)
                                        .....||+|||.|+.+.++.   ..+.++||..|.+||++. ...|+.-+|.|||||++|+.
T Consensus       159 ------------------gq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~c  217 (732)
T KOG4250|consen  159 ------------------GQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYEC  217 (732)
T ss_pred             ------------------CceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHH
Confidence                              13456999999999987765   466789999999999998 48899999999999999999


Q ss_pred             HhCCCCCCCCCCCCc-hhHHHhhhhhhc-c------------ccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC
Q 010432          360 LTGRRSMDKNRPNGE-HNLVEWARPHLG-E------------RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       360 ltg~~pf~~~~~~~~-~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      +||..||-....... ... .|...... .            ...+...+ | ............+..++..+|..+|.+
T Consensus       218 aTG~lPF~p~~~pk~~~~~-~~~~~tkkp~~v~i~~~~~eNgpv~~s~~l-P-~p~~Ls~~l~~~~~kwLa~~L~~~~~~  294 (732)
T KOG4250|consen  218 ATGELPFIPFGGPKNNKEI-MWHIITKKPSGVAIGAQEEENGPVEWSSTL-P-QPNHLSRGLATRLTKWLASMLEWNPRK  294 (732)
T ss_pred             hccCCCCCcCCCccccchh-hhhhhccCCCceeEeeecccCCceeeeccC-C-CcccccHHHHhhhhHHHHHHHhhhHHH
Confidence            999999975433211 111 11100000 0            00000001 0 122233344566778889999999999


Q ss_pred             CC--CHHHHHHHh
Q 010432          426 RP--LMSEVVEAL  436 (511)
Q Consensus       426 RP--s~~eil~~L  436 (511)
                      |.  .+.+....+
T Consensus       295 ~~~~~~~~~Fa~~  307 (732)
T KOG4250|consen  295 RGHEGFDRFFAEV  307 (732)
T ss_pred             hCCCCcchHHHHH
Confidence            98  544444333

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=9.5e-40  Score=316.93  Aligned_cols=249  Identities=24%  Similarity=0.322  Sum_probs=203.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      +|++.+.||.|+||.||+|.+..         ++..||+|++.....   ...+.+.+|+.++++++||||+++++++..
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   71 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRD---------TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD   71 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEcc---------CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC
Confidence            57888999999999999998865         577999999976432   234578899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +...++||||+.+++|.+++... ..+++..+..++.||+.||.|||+++   |+|+||||+||+++             
T Consensus        72 ~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~-------------  134 (258)
T cd05578          72 EENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLD-------------  134 (258)
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEc-------------
Confidence            99999999999999999998654 57899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +++.++|+|||++........   .....|+..|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       135 ------------~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  199 (258)
T cd05578         135 ------------EQGHVHITDFNIATKVTPDTL---TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY  199 (258)
T ss_pred             ------------CCCCEEEeecccccccCCCcc---ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCC
Confidence                        477899999999987654321   23356889999999998888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH--HHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM--SEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~--~eil~  434 (511)
                      ..........+.....    .           ....++...+..+.++|.+||+.||.+||++  .|+++
T Consensus       200 ~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         200 RGHSRTIRDQIRAKQE----T-----------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             CCCCccHHHHHHHHhc----c-----------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            8654321111111100    0           0111222335788999999999999999999  66654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3.9e-39  Score=321.22  Aligned_cols=248  Identities=27%  Similarity=0.392  Sum_probs=199.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..|.+.+.||+|+||.||+|.+..         ++..||+|.+......   ....+.+|+.+++.++||||+++++++.
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~   85 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVR---------TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL   85 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcC---------CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE
Confidence            468889999999999999998865         5779999998754322   2246789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..++||||+. |+|.+++......+++..+..++.||+.||.|||+.+   |+||||+|+||+++            
T Consensus        86 ~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~------------  149 (307)
T cd06607          86 REHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLT------------  149 (307)
T ss_pred             eCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEC------------
Confidence            9999999999996 6888877655567899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg  362 (511)
                                   +++.+||+|||++......      ....|+..|+|||++.   ...++.++|||||||++|||++|
T Consensus       150 -------------~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg  210 (307)
T cd06607         150 -------------EPGTVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (307)
T ss_pred             -------------CCCCEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcC
Confidence                         4778999999999765432      2246889999999874   45688999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..||........   ...    ...         ..........++..+.+|+.+||+.||++||++.+|+.+.
T Consensus       211 ~~p~~~~~~~~~---~~~----~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         211 KPPLFNMNAMSA---LYH----IAQ---------NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             CCCCCCccHHHH---HHH----Hhc---------CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            999965422110   000    000         0000111123467899999999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-40  Score=307.77  Aligned_cols=258  Identities=23%  Similarity=0.232  Sum_probs=203.4

Q ss_pred             hcCCCCC-CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          128 TRNFRPE-SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      +++|.+. ++||-|-.|.|..|.++.         |++.+|+|++...     ....+|++..-.. .|||||.++++|.
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~---------T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVye  125 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKR---------TQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYE  125 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEecc---------chhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhh
Confidence            4556554 479999999999998876         8889999998644     3456788876555 6999999999886


Q ss_pred             e----CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 E----DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~----~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +    ...+.+|||+++||.|+..+..+ ...+.+..+..|+.||+.|+.|||+.+   |.||||||+|+|.....    
T Consensus       126 Ns~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~----  198 (400)
T KOG0604|consen  126 NSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTS----  198 (400)
T ss_pred             hhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCC----
Confidence            4    34577999999999999999765 456999999999999999999999999   99999999999998643    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .+..+||+|||+|+......   ...+.+-|+.|.|||++-...|+..+|+||+|||+|-|+
T Consensus       199 ------------------~na~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlL  257 (400)
T KOG0604|consen  199 ------------------PNAPLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  257 (400)
T ss_pred             ------------------CCcceEecccccccccCCCc---cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhh
Confidence                              47789999999999865422   234467899999999999889999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      +|.+||+.........       .+   ..-.+.-.-.+...-....++.+++||+.+|..+|.+|.|+.+++++-+
T Consensus       258 CGyPPFYS~hg~aisp-------gM---k~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpw  324 (400)
T KOG0604|consen  258 CGYPPFYSNHGLAISP-------GM---KRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPW  324 (400)
T ss_pred             cCCCcccccCCccCCh-------hH---HhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence            9999998654321110       00   0000001111122222345788999999999999999999999998654

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=5.5e-39  Score=312.09  Aligned_cols=253  Identities=26%  Similarity=0.376  Sum_probs=207.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||.||+|.+..         +++.||||++..... .....+.+|+.++.+++|+||+++++++...
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~---------~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKP---------TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE   71 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcC---------CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC
Confidence            368889999999999999998875         578999999977644 3346789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+++++|.+++... ..+++..++.++.|++.||.|||+ .+   ++|+||+|+||+++             
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~-------------  134 (264)
T cd06623          72 GEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLIN-------------  134 (264)
T ss_pred             CeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEEC-------------
Confidence            9999999999999999999654 578999999999999999999999 88   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.++|+|||++.........  .....|+..|+|||.+.+..++.++||||||+++|+|++|..||
T Consensus       135 ------------~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~  200 (264)
T cd06623         135 ------------SKGEVKIADFGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF  200 (264)
T ss_pred             ------------CCCCEEEccCccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                        4778999999999876543322  12346889999999999889999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK-GAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ..........+......          ..    ....+.. .+..+.+++.+||..+|++||++.+++++
T Consensus       201 ~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         201 LPPGQPSFFELMQAICD----------GP----PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             ccccccCHHHHHHHHhc----------CC----CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            76543111122111110          00    0111122 45789999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=4.2e-39  Score=314.35  Aligned_cols=253  Identities=25%  Similarity=0.393  Sum_probs=199.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----------ccHHHHHHHHHHHhC-CCCCCcc
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----------QGHKEWLAEVNFLGD-LVHLNLV  198 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----------~~~~~~~~E~~il~~-l~H~nIv  198 (511)
                      +|++.+.||+|+||.||+|.+..+        ++..||+|.+.....          ....++.+|+.++.+ ++|+||+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~--------~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~   72 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNN--------GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIV   72 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCC--------CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCee
Confidence            478889999999999999998641        456899998864321          122457789988875 7999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEecc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~  274 (511)
                      ++++++..++..++||||+++++|.+++..   ....+++..++.++.|++.||.|||+ .+   |+|+||||+|||++ 
T Consensus        73 ~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~-  148 (269)
T cd08528          73 RYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLG-  148 (269)
T ss_pred             eEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEEC-
Confidence            999999999999999999999999988743   34568999999999999999999996 56   99999999999998 


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHH
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV  354 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGv  354 (511)
                                              .++.+||+|||++.......   ......|+..|+|||++.+..++.++||||||+
T Consensus       149 ------------------------~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~  201 (269)
T cd08528         149 ------------------------EDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGC  201 (269)
T ss_pred             ------------------------CCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHH
Confidence                                    47789999999998755432   223456899999999999888999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ++|||++|+.||.......   .....   ..          ...........+..+.+||.+||+.||++||++.++..
T Consensus       202 ll~~l~~g~~p~~~~~~~~---~~~~~---~~----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~  265 (269)
T cd08528         202 ILYQMCTLQPPFYSTNMLS---LATKI---VE----------AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA  265 (269)
T ss_pred             HHHHHHhCCCcccccCHHH---HHHHH---hh----------ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence            9999999999996432211   11000   00          00000001123467899999999999999999999999


Q ss_pred             Hhc
Q 010432          435 ALK  437 (511)
Q Consensus       435 ~L~  437 (511)
                      +|+
T Consensus       266 ~~~  268 (269)
T cd08528         266 MIS  268 (269)
T ss_pred             Hhc
Confidence            875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7e-39  Score=316.22  Aligned_cols=260  Identities=28%  Similarity=0.365  Sum_probs=202.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|+..+.||.|+||.||+|.+..         +++.||+|.+..... .....+.+|++++++++|+||+++++++...
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   71 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKN---------TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE   71 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECC---------CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc
Confidence            367888999999999999999865         577999999975533 2345688999999999999999999988653


Q ss_pred             --CeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          208 --DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       208 --~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                        +.+++||||+++++|.+++..   ....++...+..++.||+.||.|||+.+   ++|+||+|+||+++         
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~---------  139 (287)
T cd06621          72 SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLT---------  139 (287)
T ss_pred             CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEe---------
Confidence              468999999999999988643   3456888999999999999999999988   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .+..++|+|||++........    ....++..|+|||.+.+..++.++|||||||++|+|++|
T Consensus       140 ----------------~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g  199 (287)
T cd06621         140 ----------------RKGQVKLCDFGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQN  199 (287)
T ss_pred             ----------------cCCeEEEeecccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence                            467799999999876543221    234578899999999988999999999999999999999


Q ss_pred             CCCCCCCCCC--CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          363 RRSMDKNRPN--GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       363 ~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ..||......  ....+..+....  ...   . +....  ......++.+.+|+.+||+.||.+|||+.||+.+-.
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~~--~~~---~-~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~  268 (287)
T cd06621         200 RFPFPPEGEPPLGPIELLSYIVNM--PNP---E-LKDEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW  268 (287)
T ss_pred             CCCCCcccCCCCChHHHHHHHhcC--Cch---h-hccCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence            9999765321  111111111110  000   0 00000  001124578899999999999999999999998543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.1e-39  Score=321.75  Aligned_cols=270  Identities=24%  Similarity=0.327  Sum_probs=198.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|....         ++..||||.+......  ....+.+|+.++++++||||+++++++.
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   81 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKK---------TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR   81 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECC---------CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEe
Confidence            3579999999999999999998765         6789999998654322  2235678999999999999999999987


Q ss_pred             eCC--------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          206 EDD--------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       206 ~~~--------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ...        ..++||||+. ++|.+++......+++..++.++.||+.||.|||+++   |+|+||||+|||++    
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~----  153 (310)
T cd07865          82 TKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILIT----  153 (310)
T ss_pred             cccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEC----
Confidence            654        4599999995 5898888766567899999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccC-CCCccccchhHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGV  354 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGv  354 (511)
                                           .++.+||+|||++.........  .......++..|+|||++.+. .++.++||||||+
T Consensus       154 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  212 (310)
T cd07865         154 ---------------------KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC  212 (310)
T ss_pred             ---------------------CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence                                 4778999999999865432211  112234678899999988654 4788999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc-----cc--cc-cccCC-ccCCCC-----CHHHHHHHHHHHHHhcc
Q 010432          355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER-----RR--FY-RLIDP-RLEGHF-----SIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~--~~-~~~~~-~~~~~~-----~~~~~~~~~~Li~~cl~  420 (511)
                      ++|||++|+.||...........+..........     ..  .. ....+ ......     .......+.+||.+||.
T Consensus       213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~  292 (310)
T cd07865         213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV  292 (310)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence            9999999999997654322222221111100000     00  00 00000 000000     00123567899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 010432          421 RDPKARPLMSEVVEA  435 (511)
Q Consensus       421 ~dP~~RPs~~eil~~  435 (511)
                      .||.+||++.+++++
T Consensus       293 ~~P~~R~t~~e~l~h  307 (310)
T cd07865         293 LDPAKRIDADTALNH  307 (310)
T ss_pred             CChhhccCHHHHhcC
Confidence            999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=4.3e-39  Score=316.01  Aligned_cols=248  Identities=25%  Similarity=0.379  Sum_probs=200.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      -|++.+.||.|+||.||+|.+..         ++..||||.+..... .....+.+|+.++.+++|+||+++++++..++
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   75 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNR---------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT   75 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECC---------CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC
Confidence            46778899999999999998765         577999999865432 22356888999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+++++|.+++..  ..+++..+..++.|++.||.|||+.+   |+|+||||+||+++               
T Consensus        76 ~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~---------------  135 (277)
T cd06641          76 KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLS---------------  135 (277)
T ss_pred             eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEEC---------------
Confidence            99999999999999998853  36889999999999999999999988   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                .++.++|+|||++........  ......|+..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       136 ----------~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  203 (277)
T cd06641         136 ----------EHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE  203 (277)
T ss_pred             ----------CCCCEEEeecccceecccchh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence                      467799999999876543221  12234688999999999888889999999999999999999999965


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....   .....    ..          .....+....+..+.+++.+||+.+|.+||++.+++++
T Consensus       204 ~~~~~---~~~~~----~~----------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         204 LHPMK---VLFLI----PK----------NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             cchHH---HHHHH----hc----------CCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            33211   00000    00          00111122335678999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-39  Score=315.34  Aligned_cols=249  Identities=26%  Similarity=0.400  Sum_probs=199.5

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCC---CCCcceEeeEEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLV---HLNLVKLIGYCI  205 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~---H~nIv~l~~~~~  205 (511)
                      .|++.+.||+|+||.||+|.+..         ++..||||.+..... .....+.+|+.+++++.   |+||+++++++.
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~   72 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVP---------TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL   72 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcC---------CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee
Confidence            47788899999999999999865         577999999876532 23456888999999986   999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+...++||||+++++|.+++..  ..+++..++.++.|++.||.|||+.+   |+|+||+|+||+++            
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~------------  135 (277)
T cd06917          73 KGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVT------------  135 (277)
T ss_pred             eCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEc------------
Confidence            99999999999999999998854  37889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   +++.++|+|||++.........  .....|+..|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus       136 -------------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~  200 (277)
T cd06917         136 -------------NTGNVKLCDFGVAALLNQNSSK--RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNP  200 (277)
T ss_pred             -------------CCCCEEEccCCceeecCCCccc--cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCC
Confidence                         4678999999999876543321  233568999999998865 457899999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||..........   .    .      .....+.+...   ..+..+.+++.+||+.||++||++.+++.+
T Consensus       201 p~~~~~~~~~~~---~----~------~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         201 PYSDVDAFRAMM---L----I------PKSKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             CCCCCChhhhhh---c----c------ccCCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            997543211100   0    0      00000111110   135678999999999999999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1e-39  Score=345.90  Aligned_cols=278  Identities=18%  Similarity=0.216  Sum_probs=190.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCcc------CCCCcEE----EEEEecCCCcccHHHHHHHHHHHhCCCCCC
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVK------PGTGLTV----AVKTLNHDGLQGHKEWLAEVNFLGDLVHLN  196 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~------~~~~~~v----AvK~~~~~~~~~~~~~~~E~~il~~l~H~n  196 (511)
                      ..++|++++.||+|+||+||+|.++........      ...+...    +.|.+... ......+.+|+.+|++++|+|
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAG-SRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcc-hHHHHHHHHHHHHHHhCCCCC
Confidence            457899999999999999999987542110000      0000111    11211111 112345789999999999999


Q ss_pred             cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       197 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      ||++++++...+..|+|||++ .++|..++....    .......+..|+.||+.||.|||+++   ||||||||+||||
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl  300 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL  300 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence            999999999999999999999 568888775432    12335667789999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +                         .++.+||+|||+++........ ......||+.|+|||++.+..|+.++|||||
T Consensus       301 ~-------------------------~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  354 (501)
T PHA03210        301 N-------------------------CDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSC  354 (501)
T ss_pred             C-------------------------CCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHH
Confidence            8                         4778999999999876543221 1234679999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCC-CCCCCchhHHHhhhhh------hcc-ccccccccCCc-c---CCCCC-----HHHHHHHHHHH
Q 010432          353 GVVLLEMLTGRRSMDK-NRPNGEHNLVEWARPH------LGE-RRRFYRLIDPR-L---EGHFS-----IKGAQKAAQLA  415 (511)
Q Consensus       353 Gvil~elltg~~pf~~-~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~-~---~~~~~-----~~~~~~~~~Li  415 (511)
                      ||+||||++|..++.. ........+.......      +.. ...++..++.. +   ...++     ...+..+.++|
T Consensus       355 Gvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li  434 (501)
T PHA03210        355 GLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPL  434 (501)
T ss_pred             HHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHH
Confidence            9999999999865433 2222222222111100      000 00000000000 0   00000     01235678899


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 010432          416 AHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       416 ~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+||+.||.+|||+.|++.+
T Consensus       435 ~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        435 VKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHhccCcccCcCHHHHhhC
Confidence            99999999999999999975

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2e-39  Score=319.28  Aligned_cols=263  Identities=26%  Similarity=0.365  Sum_probs=198.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++++.||.|+||.||+|++..         ++..||||.+......  ....+.+|++++++++||||+++++++.++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   71 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKL---------TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE   71 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECC---------CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC
Confidence            48889999999999999998865         6779999998754322  234688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++||||+. ++|..++... ...+++..+..++.||+.||+|||+.+   |+|+||+|+||+++             
T Consensus        72 ~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~-------------  134 (284)
T cd07860          72 NKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLIN-------------  134 (284)
T ss_pred             CcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC-------------
Confidence            99999999995 6898888643 356899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC-CCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||++.........  .....++..|+|||++.+.. ++.++|||||||++|||+||+.|
T Consensus       135 ------------~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p  200 (284)
T cd07860         135 ------------TEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL  200 (284)
T ss_pred             ------------CCCCEEEeeccchhhcccCccc--cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                        4778999999999865432211  22345788999999887644 68899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccc--------------cccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGER--------------RRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |.......  .+...........              ..+.......+ .......+..+.+||.+||+.||.+||++.+
T Consensus       201 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  277 (284)
T cd07860         201 FPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKA  277 (284)
T ss_pred             CCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHH
Confidence            97543211  1111110000000              00000000000 0001123466889999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++.+
T Consensus       278 ~l~~  281 (284)
T cd07860         278 ALAH  281 (284)
T ss_pred             HhcC
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=5e-39  Score=315.82  Aligned_cols=260  Identities=24%  Similarity=0.313  Sum_probs=196.4

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCC-CCCcceEeeEEEeC-
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLV-HLNLVKLIGYCIED-  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~-  207 (511)
                      |++.+.||+|+||.||+|.+..         ++..||+|+++.... .......+|+.++.++. |+||+++++++.+. 
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~---------~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   71 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRK---------TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK   71 (282)
T ss_pred             CceEeeccccccceEEEEEEcC---------CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC
Confidence            6678899999999999999865         577999999876422 22234567999999995 99999999999987 


Q ss_pred             -CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 -DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       +..++||||+. |+|.+++......+++..++.++.||+.||.|||+.+   |+||||||+||+++             
T Consensus        72 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~-------------  134 (282)
T cd07831          72 TGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIK-------------  134 (282)
T ss_pred             CCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEc-------------
Confidence             88999999996 5888888765567899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  + +.+||+|||+++.......   .....++..|+|||++.. ..++.++|||||||++|||++|..|
T Consensus       135 ------------~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p  198 (282)
T cd07831         135 ------------D-DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPL  198 (282)
T ss_pred             ------------C-CCeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcC
Confidence                        4 6799999999987644322   123468899999997754 5578899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccc-------cccccCCccCCC-------CCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRR-------FYRLIDPRLEGH-------FSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |........   .............       .....+......       .....+..+.+||.+||+.||++||++.+
T Consensus       199 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  275 (282)
T cd07831         199 FPGTNELDQ---IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQ  275 (282)
T ss_pred             CCCCCHHHH---HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHH
Confidence            976543211   1111110000000       000000000000       01123678999999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++++
T Consensus       276 ~l~~  279 (282)
T cd07831         276 ALRH  279 (282)
T ss_pred             HhhC
Confidence            9875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=5.5e-39  Score=316.73  Aligned_cols=250  Identities=27%  Similarity=0.382  Sum_probs=200.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      .|...+.||+|+||.||++.+..         ++..||||.+........+.+.+|+.+++.++|+||+++++++...+.
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~   90 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKS---------TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDE   90 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECC---------CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCe
Confidence            35555789999999999998765         567999999876544445668899999999999999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      .++|+||+++++|.+++..  ..+++..+..++.|++.||+|||+++   |+||||+|+||+++                
T Consensus        91 ~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~----------------  149 (285)
T cd06648          91 LWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLT----------------  149 (285)
T ss_pred             EEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEc----------------
Confidence            9999999999999999865  46889999999999999999999998   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN  369 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~  369 (511)
                               .++.++|+|||++.........  .....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       150 ---------~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~  218 (285)
T cd06648         150 ---------SDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE  218 (285)
T ss_pred             ---------CCCcEEEcccccchhhccCCcc--cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC
Confidence                     4778999999998765432211  22356899999999998888999999999999999999999999754


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....   ......          ...+.+.  .....+..+.+|+.+||+.+|++||++.+++++
T Consensus       219 ~~~~~---~~~~~~----------~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         219 PPLQA---MKRIRD----------NLPPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             CHHHH---HHHHHh----------cCCCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            32111   111110          0000111  011134678999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.4e-39  Score=321.84  Aligned_cols=268  Identities=26%  Similarity=0.323  Sum_probs=199.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|.+..         +|..||+|.++.....  ....+.+|+.++++++|+||+++++++.
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   76 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTT---------SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVV   76 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECC---------CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEe
Confidence            4679999999999999999999865         6789999999754322  1234678999999999999999999987


Q ss_pred             eC--CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          206 ED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       206 ~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      ..  +..++||||+. ++|.+++......+++..+..++.||+.||+|||+.+   |+||||||+|||++          
T Consensus        77 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~----------  142 (309)
T cd07845          77 GKHLDSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLT----------  142 (309)
T ss_pred             cCCCCeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC----------
Confidence            65  56899999995 5899888765567899999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg  362 (511)
                                     +++.+||+|||++.........  .....++..|+|||++.+ ..++.++|||||||++|||++|
T Consensus       143 ---------------~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g  205 (309)
T cd07845         143 ---------------DKGCLKIADFGLARTYGLPAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH  205 (309)
T ss_pred             ---------------CCCCEEECccceeeecCCccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhC
Confidence                           4778999999999876543211  122346788999998875 5678999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhh-hhccc-------c--ccccccCCccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARP-HLGER-------R--RFYRLIDPRLEG--HFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~-~~~~~-------~--~~~~~~~~~~~~--~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      +.||...........+..... .....       .  .........+..  ......++.+.+||.+||+.||.+|||+.
T Consensus       206 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~  285 (309)
T cd07845         206 KPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE  285 (309)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH
Confidence            999976543221111110000 00000       0  000000000000  00011256788999999999999999999


Q ss_pred             HHHHH
Q 010432          431 EVVEA  435 (511)
Q Consensus       431 eil~~  435 (511)
                      +++.+
T Consensus       286 ~il~h  290 (309)
T cd07845         286 EALES  290 (309)
T ss_pred             HHhcC
Confidence            99974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=7.3e-39  Score=320.75  Aligned_cols=251  Identities=28%  Similarity=0.400  Sum_probs=200.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .|...+.||+|+||.||+|++..         ++..||+|.+......   ....+.+|+.++++++|+||+++++++..
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~---------~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   96 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVR---------TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR   96 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcC---------CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            36778899999999999998865         5779999999754322   23468889999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||+. |+|.+++......+++..+..++.||+.||.|||+++   |+||||+|+||+++             
T Consensus        97 ~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~-------------  159 (317)
T cd06635          97 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLT-------------  159 (317)
T ss_pred             CCeEEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEEC-------------
Confidence            999999999996 5888887665667899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                  .++.+||+|||++......      ....|+..|+|||++.   ...++.++|||||||++|||++|.
T Consensus       160 ------------~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~  221 (317)
T cd06635         160 ------------EPGQVKLADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  221 (317)
T ss_pred             ------------CCCCEEEecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC
Confidence                        4678999999998764432      2346889999999874   456889999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      .||.......  ....+..              ...........+..+.+|+.+||+.+|.+||++.+|++++..+.
T Consensus       222 ~p~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         222 PPLFNMNAMS--ALYHIAQ--------------NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             CCCCCccHHH--HHHHHHh--------------ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            9986532111  0000000              00001111233567899999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.6e-39  Score=327.89  Aligned_cols=265  Identities=23%  Similarity=0.300  Sum_probs=198.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+..         ++..||||++....  ......+.+|+.++++++|+||+++++++
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   84 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTV---------TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVF   84 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECC---------CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeee
Confidence            34789999999999999999998875         67799999986532  22234677899999999999999999988


Q ss_pred             EeC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          205 IED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       205 ~~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ...      ...|+||||+. ++|.+.+...   ++...+..++.||+.||+|||+++   |+||||||+|||++     
T Consensus        85 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~-----  152 (353)
T cd07850          85 TPQKSLEEFQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK-----  152 (353)
T ss_pred             ccCCCccccCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEC-----
Confidence            643      35799999995 5888887532   888899999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                          .++.+||+|||+++.......   .....||..|+|||++.+..++.++|||||||++|+
T Consensus       153 --------------------~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~  209 (353)
T cd07850         153 --------------------SDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  209 (353)
T ss_pred             --------------------CCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHH
Confidence                                477899999999987544321   223468899999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHH------------Hhhh----hhhccc-----cccccccCCcc----CCCCCHHHHHHHHH
Q 010432          359 MLTGRRSMDKNRPNGEHNLV------------EWAR----PHLGER-----RRFYRLIDPRL----EGHFSIKGAQKAAQ  413 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~------------~~~~----~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~  413 (511)
                      |++|+.||...........+            ....    ......     ..+........    ........+..+.+
T Consensus       210 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (353)
T cd07850         210 MIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARD  289 (353)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHH
Confidence            99999999754321110000            0000    000000     00000100000    00001133567899


Q ss_pred             HHHHhcccCCCCCCCHHHHHHH
Q 010432          414 LAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       414 Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||.+||+.||.+|||+.+++++
T Consensus       290 li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         290 LLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHHHHcCCChhhCcCHHHHhcC
Confidence            9999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=7.2e-39  Score=311.40  Aligned_cols=254  Identities=30%  Similarity=0.435  Sum_probs=201.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|.+.+.||+|+||.||+|....         ++..||+|.++.....  ....+.+|+.+++.++|+||+++++++...
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~   71 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLD---------TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR   71 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECC---------CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC
Confidence            47888999999999999998765         5779999999876543  446788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+   |+|+||+|+||+++              
T Consensus        72 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~--------------  133 (264)
T cd06626          72 EKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLD--------------  133 (264)
T ss_pred             CEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC--------------
Confidence            9999999999999999998654 45788999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCccee--eeeccccccccCCcccccCC---CCccccchhHHHHHHHHHhC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV--STRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~--~~~~~Gt~~y~aPE~~~~~~---~~~~~DIwSlGvil~elltg  362 (511)
                                 +++.+||+|||++...........  .....++..|+|||++.+..   ++.++|||||||++|+|++|
T Consensus       134 -----------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g  202 (264)
T cd06626         134 -----------HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATG  202 (264)
T ss_pred             -----------CCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhC
Confidence                       477899999999987654332211  11246789999999998766   88999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||.......  ........  .        ..+.+..  ....+..+.+|+.+||+.+|.+||++.+++.+
T Consensus       203 ~~pf~~~~~~~--~~~~~~~~--~--------~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         203 KRPWSELDNEF--QIMFHVGA--G--------HKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             CCCccCCcchH--HHHHHHhc--C--------CCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            99996542111  00000000  0        0011111  11125678899999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2.7e-39  Score=319.11  Aligned_cols=253  Identities=28%  Similarity=0.378  Sum_probs=194.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCC-CCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLV-HLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~  207 (511)
                      +|...+.||+|+||.||++.+..         ++..||||.+..... .....+.+|+.++.++. |+||+++++++..+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~   75 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKP---------SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE   75 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECC---------CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence            45566789999999999998865         678999999975432 23356889999999996 99999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHH---hh-CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCC
Q 010432          208 DQRLLVYEFMPRGSLENHL---FR-RSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l---~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ...+++|||+. ++|.++.   .. ....+++..+..++.|++.||+|||+. +   |+||||||+|||++         
T Consensus        76 ~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~---------  142 (288)
T cd06616          76 GDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLD---------  142 (288)
T ss_pred             CcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEc---------
Confidence            99999999985 4655543   22 235689999999999999999999974 6   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC---CCCccccchhHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~---~~~~~~DIwSlGvil~el  359 (511)
                                      .++.+||+|||+++.......   .....|+..|+|||++.+.   .++.++|||||||++|||
T Consensus       143 ----------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el  203 (288)
T cd06616         143 ----------------RNGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV  203 (288)
T ss_pred             ----------------cCCcEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHH
Confidence                            367799999999976543221   2234689999999998765   689999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ++|+.||.....     ..........       ...+.+........+..+.+|+.+||+.||++||++.+|+.+
T Consensus       204 ~~g~~p~~~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         204 ATGKFPYPKWNS-----VFDQLTQVVK-------GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HhCCCCchhcch-----HHHHHhhhcC-------CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            999999965421     1111110000       001111222222346789999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.5e-39  Score=313.33  Aligned_cols=251  Identities=21%  Similarity=0.356  Sum_probs=201.4

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+|.+..         +|..||+|.+.....  ...+.+.+|+.+++.++|+||+++++++...
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~   71 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKS---------DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN   71 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcC---------CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC
Confidence            47788999999999999999876         567899999976432  2335678999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ...++|+||+++++|.+++.... ..+++..++.++.|++.||.|||+++   |+|+||||+|||++.            
T Consensus        72 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~------------  136 (257)
T cd08225          72 GRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSK------------  136 (257)
T ss_pred             CeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcC------------
Confidence            99999999999999999986543 35789999999999999999999988   999999999999984            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +...+||+|||.+.........  .....|++.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       137 ------------~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  202 (257)
T cd08225         137 ------------NGMVAKLGDFGIARQLNDSMEL--AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPF  202 (257)
T ss_pred             ------------CCCeEEecccccchhccCCccc--ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                        2345799999999876543221  22346899999999998888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......      .........      ..     .......+..+.+++.+||..+|++||++.+|+++
T Consensus       203 ~~~~~~------~~~~~~~~~------~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         203 EGNNLH------QLVLKICQG------YF-----APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCccHH------HHHHHHhcc------cC-----CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            654221      111111100      00     01111234678999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=6.7e-39  Score=315.16  Aligned_cols=243  Identities=27%  Similarity=0.352  Sum_probs=188.7

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHH---hCCCCCCcceEeeEEEeCCe
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFL---GDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il---~~l~H~nIv~l~~~~~~~~~  209 (511)
                      +||+|+||.||++.+..         ++..||||.+.......   ...+.+|..++   ...+|+||+.+++++..++.
T Consensus         1 ~lg~G~~g~Vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   71 (279)
T cd05633           1 IIGRGGFGEVYGCRKAD---------TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDK   71 (279)
T ss_pred             CcccCCCeEEEEEEECC---------CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCe
Confidence            48999999999998865         67799999997643221   12334454433   34579999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      .++||||+++|+|.+++... ..+++..+..++.|++.||.|||+++   |+||||||+|||++                
T Consensus        72 ~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~----------------  131 (279)
T cd05633          72 LCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLD----------------  131 (279)
T ss_pred             EEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEEC----------------
Confidence            99999999999999988654 46899999999999999999999998   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                               ++..++|+|||++.......    .....||..|+|||++. +..++.++|||||||++|||++|..||..
T Consensus       132 ---------~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  198 (279)
T cd05633         132 ---------EHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ  198 (279)
T ss_pred             ---------CCCCEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCC
Confidence                     46789999999997654322    12246899999999886 45689999999999999999999999975


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      ........+....   .        ..    ....+...+..+.++|.+||+.||.+||     ++.+++++
T Consensus       199 ~~~~~~~~~~~~~---~--------~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         199 HKTKDKHEIDRMT---L--------TV----NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             CCCcCHHHHHHHh---h--------cC----CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            4332211111100   0        00    1112233457889999999999999999     58888775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=6.3e-39  Score=315.57  Aligned_cols=266  Identities=23%  Similarity=0.333  Sum_probs=199.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +|++.+.||.|+||.||+|++..         +|..||||+++..... ....+.+|+.++++++|+||+++++++...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   71 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRT---------TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN   71 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECC---------CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC
Confidence            58889999999999999999865         6779999999765432 2356778999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ..+|||||++ ++|.+++....  ..+++..++.++.||+.||.|||+.+   |+||||||+||+++             
T Consensus        72 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~-------------  134 (284)
T cd07836          72 KLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLIN-------------  134 (284)
T ss_pred             cEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEC-------------
Confidence            9999999997 58988886543  46899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.++|+|||++........  ......+|..|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus       135 ------------~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  200 (284)
T cd07836         135 ------------KRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPL  200 (284)
T ss_pred             ------------CCCcEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                        477899999999976543221  1223457899999998865 4578899999999999999999999


Q ss_pred             CCCCCCCCchhH-HHhhhh-------hhccccccccccCCc---cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          366 MDKNRPNGEHNL-VEWARP-------HLGERRRFYRLIDPR---LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       366 f~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      |........... ......       .+.....+.......   ....+....+..+.+++.+||+.||.+||++.+|++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         201 FPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             CCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            976543211110 000000       000000000000000   000011123567889999999999999999999986


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       281 ~  281 (284)
T cd07836         281 H  281 (284)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-39  Score=320.39  Aligned_cols=274  Identities=23%  Similarity=0.310  Sum_probs=199.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      +|++.++||+|+||.||+|.+...       .++..||||.+....   ......+.+|+.++++++||||+++++++..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~-------~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   73 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNG-------KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE   73 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCC-------CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC
Confidence            478889999999999999998642       146799999998743   2223567889999999999999999999998


Q ss_pred             C--CeEEEEEEccCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 D--DQRLLVYEFMPRGSLENHLFRR----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ~--~~~~lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .  ...++||||++ ++|.+++...    ...+++..++.++.||+.||.|||+.+   |+||||||+|||++..+.   
T Consensus        74 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~---  146 (316)
T cd07842          74 HADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGP---  146 (316)
T ss_pred             CCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCC---
Confidence            8  88999999996 4777766422    236889999999999999999999988   999999999999984211   


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCc-ceeeeeccccccccCCccccc-CCCCccccchhHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK-THVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~-~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~e  358 (511)
                                        .++.+||+|||+++....... ........+|..|+|||++.+ ..++.++|||||||++|+
T Consensus       147 ------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~  208 (316)
T cd07842         147 ------------------ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAE  208 (316)
T ss_pred             ------------------ccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence                              267899999999987644322 111223568899999998876 458899999999999999


Q ss_pred             HHhCCCCCCCCCCCCch------hHHHhhhhhhc-----------cccccccccCCccCCCCC---------H--HHHHH
Q 010432          359 MLTGRRSMDKNRPNGEH------NLVEWARPHLG-----------ERRRFYRLIDPRLEGHFS---------I--KGAQK  410 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---------~--~~~~~  410 (511)
                      |++|+.||.........      .........+.           ....+....+......++         .  ..+..
T Consensus       209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (316)
T cd07842         209 LLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQ  288 (316)
T ss_pred             HHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHH
Confidence            99999999765443200      00000000000           000000000000000000         0  23457


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          411 AAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       411 ~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.+++.+||+.||++|||+.+++++
T Consensus       289 ~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         289 GFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcC
Confidence            8899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-40  Score=316.46  Aligned_cols=293  Identities=22%  Similarity=0.257  Sum_probs=215.5

Q ss_pred             cChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC--C-
Q 010432          119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH--L-  195 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--~-  195 (511)
                      +.|........+|.+..++|+|.||.|-.+.++.         ++..||||+++.-. ...+..+-|+++|.+|.+  | 
T Consensus        79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~---------~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~  148 (415)
T KOG0671|consen   79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRE---------TKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPN  148 (415)
T ss_pred             EEEEeccccccceehhhhhcCCcccceEEEeecC---------CCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCC
Confidence            3343344457899999999999999999999876         57799999997543 223456779999999942  2 


Q ss_pred             ---CcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          196 ---NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       196 ---nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                         -+|++.+||.-.++.|||+|.+ |-++.++|..+ -.+++...+..++.|++.+++|||+.+   ++|.||||+|||
T Consensus       149 g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENIL  224 (415)
T KOG0671|consen  149 GKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENIL  224 (415)
T ss_pred             CceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEE
Confidence               2788889999999999999999 66999999764 457999999999999999999999999   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      +.+.........+.     .....-..+...|||+|||.|+......     ..++.|..|+|||++.+.+|+.++||||
T Consensus       225 fvss~~~~~~~~k~-----~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWS  294 (415)
T KOG0671|consen  225 FVSSEYFKTYNPKK-----KVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWS  294 (415)
T ss_pred             EeccceEEEeccCC-----ccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCcee
Confidence            98643221111110     0011123356789999999999865543     3356799999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc----c---------cc--------------ccccCCcc-CCCC
Q 010432          352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER----R---------RF--------------YRLIDPRL-EGHF  403 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----~---------~~--------------~~~~~~~~-~~~~  403 (511)
                      +||||+||+||...|+.........+++.+...++..    .         ++              .+...+.. .-..
T Consensus       295 iGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~  374 (415)
T KOG0671|consen  295 IGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ  374 (415)
T ss_pred             eeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc
Confidence            9999999999999998876443333333333221110    0         00              00000000 0001


Q ss_pred             CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       404 ~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...+..++.+||.+||.+||.+|+|+.|++.+
T Consensus       375 ~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  375 DDLEHVQLFDLLRRMLEFDPARRITLREALSH  406 (415)
T ss_pred             CcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence            22345679999999999999999999999874

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.3e-38  Score=314.03  Aligned_cols=254  Identities=27%  Similarity=0.408  Sum_probs=205.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+.|+....||+|+||.||+|.+..         ++..||+|++..... ....+.+|+++++.++|+||+++++++..
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   86 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRA---------TGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV   86 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEcc---------CCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE
Confidence            45678888999999999999999865         467899999986544 44678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++|+||+++++|.+++......+++..+..++.|++.||.|||+.+   |+|+||+|+||+++             
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~-------------  150 (286)
T cd06614          87 GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLS-------------  150 (286)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEc-------------
Confidence            99999999999999999999765557899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.++|+|||++........  ......|+..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       151 ------------~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~  216 (286)
T cd06614         151 ------------KDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY  216 (286)
T ss_pred             ------------CCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence                        477899999999876543221  122345788999999998888999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ........  ......    .  .    . +..  ......+..+.+||.+||+.+|.+||++.+|+++
T Consensus       217 ~~~~~~~~--~~~~~~----~--~----~-~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         217 LREPPLRA--LFLITT----K--G----I-PPL--KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             CCCCHHHH--HHHHHh----c--C----C-CCC--cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            65432110  000000    0  0    0 000  0111235678999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2e-38  Score=362.95  Aligned_cols=263  Identities=30%  Similarity=0.509  Sum_probs=204.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ...|...++||+|+||.||+|++..         ++..||||.+......    ...|+++|++++|||||+++++|.+.
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~  755 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIK---------NGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE  755 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECC---------CCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence            3567888899999999999999865         5779999998754322    23568899999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..|+||||+++|+|.+++.    .++|..+..|+.||+.||+|||....++|+||||||+|||++.             
T Consensus       756 ~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~-------------  818 (968)
T PLN00113        756 KGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG-------------  818 (968)
T ss_pred             CCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC-------------
Confidence            99999999999999999994    4889999999999999999999654455999999999999984             


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                  +...++. ||........      ....||+.|||||++.+..++.++|||||||++|||+||+.||+
T Consensus       819 ------------~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~  879 (968)
T PLN00113        819 ------------KDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD  879 (968)
T ss_pred             ------------CCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence                        4445554 5555432211      12368999999999999999999999999999999999999996


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG--HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      .... ....+..|.+..... ......+++.+..  .....+..++.+|+.+||+.||++||+|.+|++.|+.+..
T Consensus       880 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        880 AEFG-VHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             cccC-CCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            4322 223344454433221 1222334444433  2344556778899999999999999999999999987643

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=2.3e-38  Score=304.73  Aligned_cols=251  Identities=27%  Similarity=0.414  Sum_probs=205.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      +|++.+.||+|+||.||++.+..         ++..|++|++..........+.+|+.++++++|+||+++++++..+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   71 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKR---------TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDE   71 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECC---------CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe
Confidence            47788899999999999999865         567999999987655455678999999999999999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      .++++||+++++|.+++......+++..+..++.|++.||.|||.++   ++|+||+|+||+++                
T Consensus        72 ~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~----------------  132 (253)
T cd05122          72 LWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLT----------------  132 (253)
T ss_pred             EEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEc----------------
Confidence            99999999999999998765567899999999999999999999988   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN  369 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~  369 (511)
                               +++.++|+|||.+........   .....|+..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus       133 ---------~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  200 (253)
T cd05122         133 ---------SDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL  200 (253)
T ss_pred             ---------cCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence                     477899999999987655432   22356899999999998888999999999999999999999999754


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .......   ....     .......       .....+..+.+++.+||+.||.+||++.+++++
T Consensus       201 ~~~~~~~---~~~~-----~~~~~~~-------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         201 PPMKALF---KIAT-----NGPPGLR-------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             chHHHHH---HHHh-----cCCCCcC-------cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            3211110   0000     0000000       011124678999999999999999999999874

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.5e-38  Score=312.08  Aligned_cols=241  Identities=30%  Similarity=0.424  Sum_probs=190.8

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||+|+||+||+|.+..         +|+.||+|.+.....   .....+.+|+.+|+.++||||+++++++...+..|+|
T Consensus         1 lg~g~~g~vy~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   71 (277)
T cd05577           1 LGKGGFGEVCACQVKA---------TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLV   71 (277)
T ss_pred             CCCCCceeEEEEEEcC---------CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEE
Confidence            6999999999998765         577999999875432   2234567899999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          214 YEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||+++++|.+++.... ..+++..++.++.|++.||.|||+.+   |+||||+|+|||++                   
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~-------------------  129 (277)
T cd05577          72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLD-------------------  129 (277)
T ss_pred             EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEC-------------------
Confidence            99999999999986543 36899999999999999999999998   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  372 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~  372 (511)
                            +++.+||+|||++........   .....|+..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus       130 ------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  200 (277)
T cd05577         130 ------DHGNVRISDLGLAVELKGGKK---IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK  200 (277)
T ss_pred             ------CCCCEEEccCcchhhhccCCc---cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc
Confidence                  477899999999986543211   22346788999999998888999999999999999999999999754331


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      .......  .....            .....+...+..+.++|.+||+.||.+||++.+
T Consensus       201 ~~~~~~~--~~~~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         201 VEKEELK--RRTLE------------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             ccHHHHH--hcccc------------ccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence            1111000  00000            011122233578899999999999999994444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-39  Score=314.46  Aligned_cols=263  Identities=23%  Similarity=0.321  Sum_probs=197.8

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      |++.+.||.|++|.||+|.+..         +|..||||++......  ....+.+|+.++++++|+||+++++++.+++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~   71 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKL---------TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN   71 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcC---------CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC
Confidence            6778899999999999999865         5779999999765322  2356889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++||||+ +++|.+++.... ..+++..++.++.||+.||+|||+++   ++|+||+|+|||++              
T Consensus        72 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~--------------  133 (283)
T cd07835          72 KLYLVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLID--------------  133 (283)
T ss_pred             eEEEEEecc-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEc--------------
Confidence            999999999 469999886543 36899999999999999999999988   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 +++.++|+|||++.........  .....++..|+|||++.+. .++.++|||||||++|+|++|+.||
T Consensus       134 -----------~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  200 (283)
T cd07835         134 -----------REGALKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLF  200 (283)
T ss_pred             -----------CCCcEEEeecccccccCCCccc--cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence                       4778999999999765432211  1223578899999988654 5789999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhh----------ccccccccccC---CccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHL----------GERRRFYRLID---PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      .......  .+........          .....+.....   ...........+..+.+|+.+||+.||.+||++.+++
T Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il  278 (283)
T cd07835         201 PGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL  278 (283)
T ss_pred             CCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence            7543211  1111111000          00000000000   0000001112246788999999999999999999998


Q ss_pred             HH
Q 010432          434 EA  435 (511)
Q Consensus       434 ~~  435 (511)
                      ++
T Consensus       279 ~~  280 (283)
T cd07835         279 QH  280 (283)
T ss_pred             cC
Confidence            64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=8.2e-39  Score=316.68  Aligned_cols=266  Identities=23%  Similarity=0.319  Sum_probs=197.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|.+..         +++.||||.+.....  .....+.+|+.++++++|+||+++++++..
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRV---------TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS   72 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecC---------CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec
Confidence            478899999999999999998865         577999999865432  223567899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+..++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+++   |+||||||+|||++.           
T Consensus        73 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~-----------  137 (294)
T PLN00009         73 EKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDR-----------  137 (294)
T ss_pred             CCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEEC-----------
Confidence            999999999995 58888875432 33678888899999999999999988   999999999999974           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .+..+||+|||++........  ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.
T Consensus       138 -------------~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~  202 (294)
T PLN00009        138 -------------RTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKP  202 (294)
T ss_pred             -------------CCCEEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                         245699999999976543211  1223467899999998875 457899999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccc---------cccCCccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFY---------RLIDPRLEG----HFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||........  +..............+         ....+....    ......+..+.+++.+||+.||.+||++.+
T Consensus       203 pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~  280 (294)
T PLN00009        203 LFPGDSEIDE--LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARA  280 (294)
T ss_pred             CCCCCCHHHH--HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHH
Confidence            9975432211  1110000000000000         000000000    011123467899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++++
T Consensus       281 ~l~~  284 (294)
T PLN00009        281 ALEH  284 (294)
T ss_pred             HhcC
Confidence            9873

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-39  Score=279.31  Aligned_cols=266  Identities=24%  Similarity=0.301  Sum_probs=207.0

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|...++||+|.||+||+|+.++         +++.||+|.++.+...  .....++|+.+|+.|.|.|||+++++...+
T Consensus         3 ~ydkmekigegtygtvfkarn~~---------t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd   73 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD   73 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCC---------ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC
Confidence            45556789999999999999876         7889999999865432  235688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..+-||+||| ..+|..+...-++.++.+.+..++.|+++||.|+|+++   ++||||||.|+||.              
T Consensus        74 kkltlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin--------------  135 (292)
T KOG0662|consen   74 KKLTLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLIN--------------  135 (292)
T ss_pred             ceeEEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEec--------------
Confidence            9999999999 55999998877788999999999999999999999999   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHh-CCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                 .++.+||+|||+++..+-....  ....+-|.+|++|.++.+. -|++..|+||.|||+.|+.. |++.
T Consensus       136 -----------~ngelkladfglarafgipvrc--ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl  202 (292)
T KOG0662|consen  136 -----------RNGELKLADFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_pred             -----------cCCcEEecccchhhhcCCceEe--eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence                       4889999999999987654322  3334669999999999875 58999999999999999986 6777


Q ss_pred             CCCCCCCCchhHHHhhhhhhcc--ccccccccCCccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGE--RRRFYRLIDPRLEGHFSI---------KGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      |.+....+....+-+......+  ...+..+.|...-+.++.         .....-++|++++|.-+|.+|.++++.++
T Consensus       203 fpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  203 FPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            7766544433323232221111  111222222221122211         11234578999999999999999999887


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       283 h  283 (292)
T KOG0662|consen  283 H  283 (292)
T ss_pred             C
Confidence            4

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=8.1e-39  Score=316.65  Aligned_cols=266  Identities=23%  Similarity=0.294  Sum_probs=196.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCC-CCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLV-HLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~-H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|.+..         +++.||||.+......  ....+.+|+.+++.+. |+||+++++++.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~---------~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~   71 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKN---------TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEH   71 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECC---------CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEe
Confidence            368899999999999999999865         6779999998754321  2356788999999995 699999999988


Q ss_pred             eCCe-----EEEEEEccCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          206 EDDQ-----RLLVYEFMPRGSLENHLFRR----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       206 ~~~~-----~~lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      ..+.     .|+||||+++ +|.+++...    ...+++..++.++.||+.||.|||+++   |+||||||+|||++.  
T Consensus        72 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~--  145 (295)
T cd07837          72 VEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDK--  145 (295)
T ss_pred             ecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEec--
Confidence            7665     8999999975 898888643    245899999999999999999999988   999999999999983  


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV  355 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvi  355 (511)
                                            +++.+||+|||+++........  .....+++.|+|||++.+ ..++.++|||||||+
T Consensus       146 ----------------------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~  201 (295)
T cd07837         146 ----------------------QKGLLKIADLGLGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCI  201 (295)
T ss_pred             ----------------------CCCeEEEeecccceecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHHH
Confidence                                  2678999999999865332111  122357889999998865 467999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhh-hcccccccccc-----------CCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPH-LGERRRFYRLI-----------DPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +|+|++|..||........  +....... ......+....           .+..........+..+.+||.+||+.||
T Consensus       202 l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  279 (295)
T cd07837         202 FAEMSRKQPLFPGDSELQQ--LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDP  279 (295)
T ss_pred             HHHHHcCCCCCCCCCHHHH--HHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCCh
Confidence            9999999999976432211  11100000 00000000000           0000000011235778999999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      .+||++.+++.+
T Consensus       280 ~~R~~~~eil~~  291 (295)
T cd07837         280 AKRISAKAALTH  291 (295)
T ss_pred             hhcCCHHHHhcC
Confidence            999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-39  Score=324.13  Aligned_cols=265  Identities=24%  Similarity=0.335  Sum_probs=196.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||.||+|.+..         +|..||||.+..... .....+.+|+.++++++|+||+++++++..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   74 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKP---------TGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRP   74 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcC---------CCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeec
Confidence            4689999999999999999998865         678999999964322 233567889999999999999999998765


Q ss_pred             C-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 D-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .     ...++||||+. ++|..++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++        
T Consensus        75 ~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~--------  140 (336)
T cd07849          75 PSFESFNDVYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLN--------  140 (336)
T ss_pred             ccccccceEEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEC--------
Confidence            4     35799999995 588887743  46899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCccccc-CCCCccccchhHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~el  359 (511)
                                       .++.+||+|||++.......... ......||..|+|||++.+ ..++.++|||||||++|+|
T Consensus       141 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el  203 (336)
T cd07849         141 -----------------TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM  203 (336)
T ss_pred             -----------------CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence                             47789999999998654322111 1223568999999998764 5689999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhcc--ccccccccCCc---------cCCCC-----CHHHHHHHHHHHHHhcccCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGE--RRRFYRLIDPR---------LEGHF-----SIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~Li~~cl~~dP  423 (511)
                      ++|+.||........   .......+..  ...+..+.+..         .....     ....+..+.+||.+||+.||
T Consensus       204 ~~G~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  280 (336)
T cd07849         204 LSNRPLFPGKDYLHQ---LNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNP  280 (336)
T ss_pred             HhCCCCCCCCCHHHH---HHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCCh
Confidence            999999975432111   0000000000  00000000000         00000     01124678999999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      .+||++.+++++
T Consensus       281 ~~Rpt~~e~l~h  292 (336)
T cd07849         281 HKRITVEEALAH  292 (336)
T ss_pred             hhCcCHHHHhcC
Confidence            999999999986

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-38  Score=308.34  Aligned_cols=252  Identities=24%  Similarity=0.340  Sum_probs=198.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-----cccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .+|++.+.||+|+||.||+|.+..         ++..||+|.+....     ......+.+|+.++++++|+||++++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~   72 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDAD---------TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGC   72 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcC---------CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEE
Confidence            478899999999999999998765         67899999885431     1223467889999999999999999999


Q ss_pred             EEeC--CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +.+.  ...++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+|+||||+||+++        
T Consensus        73 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~--------  140 (264)
T cd06653          73 LRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRD--------  140 (264)
T ss_pred             EEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEc--------
Confidence            8764  4678999999999999998654 35889999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                       .++.++|+|||+++........ .......|+..|+|||++.+..++.++|||||||++|+|+
T Consensus       141 -----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  203 (264)
T cd06653         141 -----------------SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML  203 (264)
T ss_pred             -----------------CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH
Confidence                             4677999999999865331110 1122356899999999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|+.||......  .....              .........++...++.+.+++.+||+ +|..||++.+++.+
T Consensus       204 ~g~~p~~~~~~~--~~~~~--------------~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         204 TEKPPWAEYEAM--AAIFK--------------IATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             hCCCCCCccCHH--HHHHH--------------HHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            999999643211  11110              010111122333446789999999999 57999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=4.8e-38  Score=307.03  Aligned_cols=248  Identities=21%  Similarity=0.216  Sum_probs=192.9

Q ss_pred             HHHhcCCCCCCcc--ccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          125 KLATRNFRPESLL--GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       125 ~~~~~~y~~~~~l--G~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      ....++|++.+.+  |+|+||.||++..+.         ++..+|+|.+........     |+.+...+ +|+||++++
T Consensus        10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~   75 (267)
T PHA03390         10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKP---------TQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLY   75 (267)
T ss_pred             HHHHHhhccccceeecCCCceEEEEEEEcC---------CCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEE
Confidence            3445677777776  999999999998865         677999999876432221     22222222 799999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++..++..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+   |+||||||+||+++.       
T Consensus        76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~-------  144 (267)
T PHA03390         76 YSVTTLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDR-------  144 (267)
T ss_pred             EEEecCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeC-------
Confidence            99999999999999999999999996553 7899999999999999999999998   999999999999984       


Q ss_pred             CcceeeeccccccccccccC-ceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~-~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        +. .++|+|||+++......      ...|+..|+|||++.+..++.++|||||||++|||+
T Consensus       145 ------------------~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~  200 (267)
T PHA03390        145 ------------------AKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELL  200 (267)
T ss_pred             ------------------CCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHH
Confidence                              44 79999999998654321      246899999999999889999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-MSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-~~eil~~  435 (511)
                      +|+.||....... .....+.... .          .  ........+..+.+||.+||+.||.+||+ +++++++
T Consensus       201 ~g~~p~~~~~~~~-~~~~~~~~~~-~----------~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        201 TGKHPFKEDEDEE-LDLESLLKRQ-Q----------K--KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             HCCCCCCCCCcch-hhHHHHHHhh-c----------c--cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            9999997443221 1111111100 0          0  00111234678999999999999999996 6998864

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=3e-38  Score=305.19  Aligned_cols=253  Identities=28%  Similarity=0.420  Sum_probs=205.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|...+.||+|+||.||+|.+..         ++..|++|++.....  ...+.+.+|+.++++++|+||+++++++...
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKD---------TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE   71 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECC---------CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC
Confidence            47778899999999999998875         577999999976643  2346788999999999999999999999988


Q ss_pred             --CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 --DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 --~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                        ...++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+   ++|+||+|+||+++            
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~------------  135 (260)
T cd06606          72 EKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVD------------  135 (260)
T ss_pred             CCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEc------------
Confidence              88999999999999999997654 8899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.++|+|||.+................++..|+|||.+.+..++.++||||||+++|+|++|..|
T Consensus       136 -------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  202 (260)
T cd06606         136 -------------SDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPP  202 (260)
T ss_pred             -------------CCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                         4678999999999876654321112335689999999999888899999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |......     .....          ..........++...+..+.+|+.+||+.||.+||++.+++++
T Consensus       203 ~~~~~~~-----~~~~~----------~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         203 WSELGNP-----MAALY----------KIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CCCCCch-----HHHHH----------hccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            9765410     00000          0010011112223336789999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2.1e-38  Score=306.37  Aligned_cols=250  Identities=24%  Similarity=0.373  Sum_probs=205.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|.+.+.||.|+||.||++.+..         ++..||+|++.....  .....+.+|+++++.++|+|++++++.+...
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~   71 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKS---------DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK   71 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcC---------CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC
Confidence            57888999999999999999865         577999999986543  3345688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      +..++||||+++++|.+++...   ...+++..+..++.+++.||.|||+++   ++|+||+|+|||++           
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~-----------  137 (258)
T cd08215          72 GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLT-----------  137 (258)
T ss_pred             CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEc-----------
Confidence            9999999999999999999764   367999999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    ++..++|+|||++........  ......|++.|+|||.+.+..++.++||||||+++|+|++|..
T Consensus       138 --------------~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~  201 (258)
T cd08215         138 --------------SNGLVKLGDFGISKVLSSTVD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH  201 (258)
T ss_pred             --------------CCCcEEECCccceeecccCcc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCC
Confidence                          467899999999987654331  2233568999999999988889999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   .+....   ...       .    ....+...+..+.+++.+||..+|++||++.+++++
T Consensus       202 p~~~~~~~---~~~~~~---~~~-------~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         202 PFEGENLL---ELALKI---LKG-------Q----YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCcHH---HHHHHH---hcC-------C----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            99654321   111110   000       0    011112335778999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=2.4e-38  Score=318.62  Aligned_cols=263  Identities=21%  Similarity=0.250  Sum_probs=192.9

Q ss_pred             CccccC--CCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEG--GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G--~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      ..||+|  +||+||+|++..         +|+.||||++......  ..+.+.+|+.+++.++||||++++++|..++..
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~   74 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTP---------TGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWL   74 (328)
T ss_pred             HHhCCcccCceeEEEEEEcC---------CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCce
Confidence            356666  999999999865         6789999999765332  235678899999999999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          211 LLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      ++||||+.+|+|.+++... ...+++..+..++.||+.||+|||+++   |+||||||+|||++                
T Consensus        75 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~----------------  135 (328)
T cd08226          75 WVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILIS----------------  135 (328)
T ss_pred             EEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEe----------------
Confidence            9999999999999998654 235889999999999999999999988   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCccccc--CCCCccccchhHHHHHHHHHhC
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~elltg  362 (511)
                               .++.+|++|||.+..........     ......++..|||||++.+  ..++.++|||||||++|||++|
T Consensus       136 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g  206 (328)
T cd08226         136 ---------GDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATG  206 (328)
T ss_pred             ---------CCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhC
Confidence                     36779999998654322111000     0011235677999999876  3578999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhh-h--------ccc--------ccc--------------ccccCCccCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPH-L--------GER--------RRF--------------YRLIDPRLEGHFSIKGAQKA  411 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~-~--------~~~--------~~~--------------~~~~~~~~~~~~~~~~~~~~  411 (511)
                      ..||.......  ......... .        ...        ...              .......+.......++..+
T Consensus       207 ~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (328)
T cd08226         207 RVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAF  284 (328)
T ss_pred             CCCCCCcChHH--HHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHH
Confidence            99997543211  111000000 0        000        000              00001111222233467789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          412 AQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       412 ~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .+||.+||+.||++|||+.+++++-
T Consensus       285 ~~li~~~l~~dP~~Rpta~e~l~~~  309 (328)
T cd08226         285 QNLVELCLQQDPEKRPSASSLLSHA  309 (328)
T ss_pred             HHHHHHHccCCcccCCCHHHHhhCH
Confidence            9999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.2e-38  Score=312.70  Aligned_cols=265  Identities=18%  Similarity=0.225  Sum_probs=188.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH-----------HHHHHHHHHHhCCCCC
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-----------KEWLAEVNFLGDLVHL  195 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~-----------~~~~~E~~il~~l~H~  195 (511)
                      ..++|.+.++||+|+||.||+|.+..+..      .+..+|+|+.........           .....+...+..+.|+
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~------~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~   83 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHC------INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHL   83 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcc------cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCC
Confidence            34689999999999999999999865311      145677776543321110           1123344556778999


Q ss_pred             CcceEeeEEEeCC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          196 NLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       196 nIv~l~~~~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      ||+++++++....    ..+++||++ ..++.+.+.. ....++..+..|+.||+.||+|||+++   |+||||||+|||
T Consensus        84 ~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nil  158 (294)
T PHA02882         84 GIPKYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIM  158 (294)
T ss_pred             CCCcEEEeeeEecCCceEEEEEEehh-ccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEE
Confidence            9999999776543    447889988 4477666643 234678888999999999999999988   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCcc
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSR  346 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~  346 (511)
                      ++                         .+..+||+|||+|+........     .......||+.|+|||++.+..++.+
T Consensus       159 l~-------------------------~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~  213 (294)
T PHA02882        159 VD-------------------------GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRR  213 (294)
T ss_pred             Ec-------------------------CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcH
Confidence            98                         3677999999999865432111     11123469999999999999999999


Q ss_pred             ccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       347 ~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      +|||||||+||||++|+.||........  +.......+     ..++....+.   ....++.+.+++..||..+|++|
T Consensus       214 ~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r  283 (294)
T PHA02882        214 GDLESLGYCMLKWAGIKLPWKGFGHNGN--LIHAAKCDF-----IKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEK  283 (294)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccccchH--HHHHhHHHH-----HHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999976532221  111000000     0000000000   01124678999999999999999


Q ss_pred             CCHHHHHHHhc
Q 010432          427 PLMSEVVEALK  437 (511)
Q Consensus       427 Ps~~eil~~L~  437 (511)
                      |++.+|++.|.
T Consensus       284 p~~~~l~~~~~  294 (294)
T PHA02882        284 PDYDALIKIFD  294 (294)
T ss_pred             CCHHHHHHhhC
Confidence            99999998763

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-40  Score=358.06  Aligned_cols=254  Identities=29%  Similarity=0.415  Sum_probs=204.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +-++.-...||.|.||.||-|...+         +|...|+|-++.....  ....+.+|..+|..|+|||||++||+-.
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~---------tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv 1304 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLD---------TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV 1304 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCC---------ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee
Confidence            3466777889999999999998766         7889999988754332  2345789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+..+|.||||.+|+|.+.+. .+...++.....+..|++.||.|||++|   ||||||||+||||+.           
T Consensus      1305 HRekv~IFMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~----------- 1369 (1509)
T KOG4645|consen 1305 HREKVYIFMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDF----------- 1369 (1509)
T ss_pred             cHHHHHHHHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeec-----------
Confidence            9999999999999999999884 4445777778888999999999999999   999999999999994           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccC---CCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~---~~~~~~DIwSlGvil~ell  360 (511)
                                    ++.+|++|||.|..........  ......||+.|||||++.+.   ...-+.||||||||+.||+
T Consensus      1370 --------------~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~ 1435 (1509)
T KOG4645|consen 1370 --------------NGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMA 1435 (1509)
T ss_pred             --------------CCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEee
Confidence                          7789999999998766542111  12246899999999999753   4567899999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||+.||......       |+-        ++. +-..-.+.++...+.+-.++|.+||..||++|+++.+|+++
T Consensus      1436 tGkrPW~~~dne-------~aI--------My~-V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1436 TGKRPWAELDNE-------WAI--------MYH-VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             cCCCchhhccch-------hHH--------HhH-HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            999999754322       110        000 00111233444567888999999999999999999999875

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2e-38  Score=308.36  Aligned_cols=243  Identities=26%  Similarity=0.356  Sum_probs=196.1

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||.|+||.||+|++..         ++..||+|++......   ..+.+.+|+.+++.++|+||+++++++.++...++|
T Consensus         1 lg~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   71 (262)
T cd05572           1 LGVGGFGRVELVKVKS---------KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYML   71 (262)
T ss_pred             CCCCCceEEEEEEECC---------CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEE
Confidence            7999999999999865         5779999999764322   235688999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++++|.+++.+. ..+++..+..++.||+.||.|||+++   ++|+||||+||+++                    
T Consensus        72 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~--------------------  127 (262)
T cd05572          72 MEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLD--------------------  127 (262)
T ss_pred             EecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEc--------------------
Confidence            9999999999999654 45889999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG  373 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~  373 (511)
                           .++.++|+|||++........   .....|+..|+|||++.+..++.++||||||+++|+|++|..||.......
T Consensus       128 -----~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  199 (262)
T cd05572         128 -----SNGYVKLVDFGFAKKLKSGQK---TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP  199 (262)
T ss_pred             -----CCCCEEEeeCCcccccCcccc---cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH
Confidence                 477899999999987655321   223568999999999988889999999999999999999999997654211


Q ss_pred             chhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 010432          374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVE  434 (511)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~  434 (511)
                      .. .   ...          .........++...+..+.++|.+||+.||++||+     +.|+++
T Consensus       200 ~~-~---~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         200 ME-I---YND----------ILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HH-H---HHH----------HhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            11 1   100          00000111222223578999999999999999999     677765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-39  Score=303.85  Aligned_cols=262  Identities=26%  Similarity=0.352  Sum_probs=203.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.||+|+|+.|--|....         +|..||||++.+...-.+.++.+|++++.+. .|+||++|+++|.+++..|||
T Consensus        84 e~LGeGAyasVqtcv~i~---------t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLV  154 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQ---------TGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLV  154 (463)
T ss_pred             HHhcCccceeeeeeeeec---------cchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEE
Confidence            479999999999998766         7889999999887656667899999999998 699999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      ||-+.||.|..+|.++ ..+++..+..+..+|+.||.|||.+|   |.||||||+|||...++                 
T Consensus       155 fEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn-----------------  213 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPN-----------------  213 (463)
T ss_pred             EecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCC-----------------
Confidence            9999999999999765 46899999999999999999999999   99999999999998643                 


Q ss_pred             cccccccCceeeecCCCcccCCCCCc-----ceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHhCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDK-----THVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~-----~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~elltg~  363 (511)
                           .-.-||||||-|..-......     +....+.+|+..|||||++.     ...|+.++|.||||||||-||+|.
T Consensus       214 -----~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGY  288 (463)
T KOG0607|consen  214 -----KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGY  288 (463)
T ss_pred             -----CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCC
Confidence                 234589999988764322111     11233468999999999874     346899999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhcc--ccccccccC-Ccc--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGE--RRRFYRLID-PRL--EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~--~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +||.+....+..    |-+...-.  ...+++.+. ..+  +..-....+.+.++|+..+|..|+.+|.++.+++++
T Consensus       289 pPFvG~Cg~dCG----WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh  361 (463)
T KOG0607|consen  289 PPFVGHCGADCG----WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH  361 (463)
T ss_pred             CCccCccCCcCC----ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence            999876543211    11110000  011111111 111  111123457889999999999999999999999984

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=4.8e-38  Score=308.90  Aligned_cols=243  Identities=26%  Similarity=0.355  Sum_probs=188.8

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHH---HHHhCCCCCCcceEeeEEEeCCe
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEV---NFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~---~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      +||+|+||.||+|++..         +++.||||.+.......   ...+..|.   ..++...||||+++++++...+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   71 (278)
T cd05606           1 IIGRGGFGEVYGCRKAD---------TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK   71 (278)
T ss_pred             CcccCCCeEEEEEEEec---------CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCE
Confidence            48999999999998765         67899999987643221   12233443   34555689999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      .++||||+.+|+|..++.. ...+++..++.++.|++.||.|||+.+   |+||||||+|||++                
T Consensus        72 ~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~----------------  131 (278)
T cd05606          72 LSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLD----------------  131 (278)
T ss_pred             EEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEEC----------------
Confidence            9999999999999998854 347899999999999999999999988   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                               .+..+||+|||++.......    .....|+..|+|||++.++ .++.++|||||||++|||++|+.||..
T Consensus       132 ---------~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~  198 (278)
T cd05606         132 ---------EHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ  198 (278)
T ss_pred             ---------CCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence                     46789999999997654322    1234689999999998754 689999999999999999999999976


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      ............   .        .....    .++...+..+.+|+.+||..+|.+||     ++.+++++
T Consensus       199 ~~~~~~~~~~~~---~--------~~~~~----~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         199 HKTKDKHEIDRM---T--------LTMAV----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             CCccchHHHHHH---h--------hccCC----CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            532221111000   0        00011    11222357899999999999999999     89999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=2.6e-38  Score=314.12  Aligned_cols=270  Identities=26%  Similarity=0.318  Sum_probs=200.5

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ...++|++.+.||+|+||.||+|.+..         +++.||||+++....  .....+.+|+.+++.++||||++++++
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~   74 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKD---------TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEI   74 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECC---------CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeehe
Confidence            345789999999999999999999875         577999999975432  223457789999999999999999999


Q ss_pred             EEeCC----------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          204 CIEDD----------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       204 ~~~~~----------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      +....          ..++||||+++ +|..++......+++..++.++.||+.||+|||+.+   |+|+||||+||+++
T Consensus        75 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~  150 (302)
T cd07864          75 VTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLN  150 (302)
T ss_pred             ecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence            87654          78999999965 788877665557899999999999999999999998   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSF  352 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSl  352 (511)
                                               +++.+||+|||++......... ......++..|+|||++.+ ..++.++|||||
T Consensus       151 -------------------------~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~sl  204 (302)
T cd07864         151 -------------------------NKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSC  204 (302)
T ss_pred             -------------------------CCCcEEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHH
Confidence                                     4778999999999876543321 1122356888999998864 457899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhh-hhcc-cccc-----ccccC------CccCCCCCHHHHHHHHHHHHHhc
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARP-HLGE-RRRF-----YRLID------PRLEGHFSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~-~~~~-----~~~~~------~~~~~~~~~~~~~~~~~Li~~cl  419 (511)
                      ||++|||++|+.||...........+..... .... ...+     ....+      ......+ ...+..+.+|+.+||
T Consensus       205 G~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l  283 (302)
T cd07864         205 GCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHML  283 (302)
T ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHc
Confidence            9999999999999975432211111111000 0000 0000     00000      0000000 012567899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 010432          420 SRDPKARPLMSEVVEA  435 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~  435 (511)
                      +.||.+||++.+|+.+
T Consensus       284 ~~~P~~Rp~~~~il~~  299 (302)
T cd07864         284 TLDPSKRCTAEEALNS  299 (302)
T ss_pred             cCChhhCCCHHHHhcC
Confidence            9999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-38  Score=312.65  Aligned_cols=266  Identities=24%  Similarity=0.316  Sum_probs=200.6

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC-
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED-  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~-  207 (511)
                      |++.+.||.|+||.||+|.+..         +++.||+|++....  ......+.+|+.++++++|+||+++++++... 
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~---------~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   71 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKK---------TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG   71 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECC---------CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC
Confidence            6678899999999999999875         57799999998663  22335688999999999999999999999887 


Q ss_pred             -CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 -DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       +..++||||++ ++|.+++......+++..++.++.||+.||+|||+.+   ++|+||||+|||++             
T Consensus        72 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~-------------  134 (287)
T cd07840          72 KGSIYMVFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILIN-------------  134 (287)
T ss_pred             CCcEEEEecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEc-------------
Confidence             88999999996 5899988765567899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.+||+|||++......... ..+...++..|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus       135 ------------~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p  201 (287)
T cd07840         135 ------------NDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPI  201 (287)
T ss_pred             ------------CCCCEEEccccceeeccCCCcc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCC
Confidence                        4778999999999876554321 1223457889999998765 4678999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhh--cccccc-----ccccC------CccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHL--GERRRF-----YRLID------PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |...................  .....+     .....      ..+...+...++..+.+++.+||+.+|.+||++.++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~  281 (287)
T cd07840         202 FQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQA  281 (287)
T ss_pred             CCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            97654321111110000000  000000     00000      000001111125778999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       282 l~~  284 (287)
T cd07840         282 LQH  284 (287)
T ss_pred             hhC
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.4e-38  Score=321.40  Aligned_cols=268  Identities=28%  Similarity=0.343  Sum_probs=198.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      ..++|++.+.||+|+||.||+|.+..         ++..||||++....  ......+.+|+.+++++ +|+||++++++
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~   75 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRR---------TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNV   75 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcC---------CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeee
Confidence            34678899999999999999998865         57799999886432  22234577899999999 99999999999


Q ss_pred             EEeC--CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +...  ...++||||+. ++|..++...  .+++..+..++.||+.||.|||+++   |+||||||+|||++        
T Consensus        76 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~--------  141 (337)
T cd07852          76 IKAENDKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLN--------  141 (337)
T ss_pred             eccCCCceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEc--------
Confidence            8653  36899999996 5999988543  6788999999999999999999988   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc---eeeeeccccccccCCccccc-CCCCccccchhHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~  357 (511)
                                       .++.+||+|||++.........   .......||..|+|||++.+ ..++.++|||||||++|
T Consensus       142 -----------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~  204 (337)
T cd07852         142 -----------------SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG  204 (337)
T ss_pred             -----------------CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHH
Confidence                             4788999999999876443221   12234568999999998765 46789999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhh--------h--ccccccccccC----CccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPH--------L--GERRRFYRLID----PRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +|++|+.||..................        +  .....+...+.    ..+.. .....+..+.+||.+||+.||
T Consensus       205 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P  283 (337)
T cd07852         205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE-LLPKASDDALDLLKKLLVFNP  283 (337)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhh-hccCCCHHHHHHHHHhccCCc
Confidence            999999999754322111000000000        0  00000000000    00000 011135778999999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      ++|||+.+++++
T Consensus       284 ~~Rps~~~il~~  295 (337)
T cd07852         284 NKRLTAEEALEH  295 (337)
T ss_pred             ccccCHHHHhhC
Confidence            999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=9.1e-39  Score=322.46  Aligned_cols=266  Identities=23%  Similarity=0.347  Sum_probs=199.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|....         +|..||+|++.....  .....+.+|+.+|++++|+||+++++++..
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~---------~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   75 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTR---------SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRP   75 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcC---------CCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccc
Confidence            689999999999999999998875         678999999976432  234567889999999999999999998763


Q ss_pred             ----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 ----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                          ....++||||+. |+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++         
T Consensus        76 ~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~---------  141 (334)
T cd07855          76 PGADFKDVYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVN---------  141 (334)
T ss_pred             cCCCCceEEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEc---------
Confidence                356899999994 6999988544 45899999999999999999999988   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCccccc-CCCCccccchhHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~el  359 (511)
                                      +++.+||+|||++.........  .......|+..|+|||++.+ ..++.++|||||||++|||
T Consensus       142 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el  205 (334)
T cd07855         142 ----------------EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEM  205 (334)
T ss_pred             ----------------CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHH
Confidence                            4778999999999765432211  11223578999999998865 4689999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccc----------cccccc---cCCccC---CCCCHHHHHHHHHHHHHhcccCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGER----------RRFYRL---IDPRLE---GHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~~---~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      ++|+.||...........   .....+..          ......   ......   .......+..+.++|.+||+.+|
T Consensus       206 ~~g~~pf~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  282 (334)
T cd07855         206 LGRRQLFPGKNYVHQLKL---ILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDP  282 (334)
T ss_pred             HcCCCccCCCChHHHHHH---HHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCCh
Confidence            999999976433211110   00000000          000000   000000   00111235789999999999999


Q ss_pred             CCCCCHHHHHHHh
Q 010432          424 KARPLMSEVVEAL  436 (511)
Q Consensus       424 ~~RPs~~eil~~L  436 (511)
                      .+||++.+++.+.
T Consensus       283 ~~Rpt~~~~l~~~  295 (334)
T cd07855         283 EERITVEQALQHP  295 (334)
T ss_pred             hhCcCHHHHHhCh
Confidence            9999999999853

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4.4e-38  Score=314.58  Aligned_cols=245  Identities=28%  Similarity=0.409  Sum_probs=195.8

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      |...+.||+|+||.||+|++..         ++..||||.+......   ....+.+|+.+++.++|+||+++++++.+.
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~---------~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   93 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSH---------TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE   93 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECC---------CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC
Confidence            6667789999999999998765         6779999999754332   224578899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..|+||||+. |+|.+++......+++..++.++.||+.||.|||+++   |+|+||||+||+++              
T Consensus        94 ~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~--------------  155 (313)
T cd06633          94 HTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLT--------------  155 (313)
T ss_pred             CEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEEC--------------
Confidence            99999999995 6888888766667999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                 +++.+||+|||++......      ....|+..|+|||++.   ...++.++|||||||++|||++|..
T Consensus       156 -----------~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~  218 (313)
T cd06633         156 -----------EPGQVKLADFGSASKSSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  218 (313)
T ss_pred             -----------CCCCEEEeecCCCcccCCC------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                       4678999999998754321      2356899999999984   4568899999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||..........   ...  ...           .........+..+.+|+.+||+.+|.+||++.+++.+
T Consensus       219 p~~~~~~~~~~~---~~~--~~~-----------~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         219 PLFNMNAMSALY---HIA--QND-----------SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             CCCCCChHHHHH---HHH--hcC-----------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            997543211110   000  000           0000111224568999999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-40  Score=313.58  Aligned_cols=243  Identities=26%  Similarity=0.366  Sum_probs=201.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH---HHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~---~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      ..+|..+.+||+|+||.|.+|..+.         +.+.||||+++++.....   +--+.|-++|.-. +-|.+++|+.+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkg---------tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc  418 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKG---------TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC  418 (683)
T ss_pred             ecccceEEEeccCccceeeeecccC---------cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH
Confidence            4578889999999999999998764         677999999998754322   2235688888776 57899999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      |+.-+.+|+||||+.||+|.-+|++- +.+.+..+..++.+||-||-|||+++   ||+||||.+||||+.         
T Consensus       419 FQTmDRLyFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~---------  485 (683)
T KOG0696|consen  419 FQTMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDS---------  485 (683)
T ss_pred             hhhhhheeeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEecc---------
Confidence            99999999999999999999888554 46888899999999999999999999   999999999999994         


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                      ++++||+|||+++...-...+  ..+++||+.|+|||++...+|+..+|+|||||+||||+.|+
T Consensus       486 ----------------eGHiKi~DFGmcKEni~~~~T--TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQ  547 (683)
T KOG0696|consen  486 ----------------EGHIKIADFGMCKENIFDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ  547 (683)
T ss_pred             ----------------CCceEeeecccccccccCCcc--eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCC
Confidence                            889999999999875444332  44589999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      +||++..+...   ..             .+.+.  .-.++...+.++..++...|...|.+|..
T Consensus       548 pPFdGeDE~el---F~-------------aI~eh--nvsyPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  548 PPFDGEDEDEL---FQ-------------AIMEH--NVSYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             CCCCCCCHHHH---HH-------------HHHHc--cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence            99987654321   11             11111  12344556788999999999999999963

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-39  Score=318.89  Aligned_cols=249  Identities=24%  Similarity=0.302  Sum_probs=205.0

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~  211 (511)
                      .++||.|.||+||-|+++.         +|+.||||++.+...  +...++.+|+.||.+++||.||.|...|...+.+|
T Consensus       569 devLGSGQFG~VYgg~hRk---------tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervF  639 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRK---------TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVF  639 (888)
T ss_pred             HhhccCCcceeeecceecc---------cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEE
Confidence            3689999999999999887         789999999987644  23456788999999999999999999999999999


Q ss_pred             EEEEccCCCCHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          212 LVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       212 lv~E~~~~g~L~~~l-~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      +|||-+ .||+.+.| ....+.+++.....++.||+.||.|||.++   |+|+||||+||||....              
T Consensus       640 VVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~--------------  701 (888)
T KOG4236|consen  640 VVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASAS--------------  701 (888)
T ss_pred             EEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCC--------------
Confidence            999999 55665555 456678999999999999999999999999   99999999999998632              


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              +..++||||||+|+..++...   ...++||+.|+|||+++...|+..-|+||.|||+|--++|..||....
T Consensus       702 --------~FPQvKlCDFGfARiIgEksF---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE  770 (888)
T KOG4236|consen  702 --------PFPQVKLCDFGFARIIGEKSF---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE  770 (888)
T ss_pred             --------CCCceeeccccceeecchhhh---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc
Confidence                    356899999999999876443   455899999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +.  .+-++.+.-.              +...-..+.+..+.+||..+|+..-.+|.|....+.+.
T Consensus       771 dI--ndQIQNAaFM--------------yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~  820 (888)
T KOG4236|consen  771 DI--NDQIQNAAFM--------------YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP  820 (888)
T ss_pred             ch--hHHhhccccc--------------cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch
Confidence            22  1111111111              11222234567889999999999999999999887654

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2e-38  Score=311.50  Aligned_cols=262  Identities=26%  Similarity=0.341  Sum_probs=202.5

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      |++.+.||+|++|.||+|.+..         +++.+|+|.+......  ....+.+|+.+|++++|+||+++++++..++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   71 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKL---------TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG   71 (283)
T ss_pred             CccceeeecCCCceEEEEEcCC---------CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC
Confidence            5677899999999999998765         5779999998765433  3456889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||++ ++|.+++......+++..++.++.||+.||.|||+++   |+|+||||+||+++               
T Consensus        72 ~~~~v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~---------------  132 (283)
T cd05118          72 DLYLVFEFMD-TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLIN---------------  132 (283)
T ss_pred             CEEEEEeccC-CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEEC---------------
Confidence            9999999996 4999888776668899999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                +++.+||+|||.+........  ......++..|+|||.+.+. .++.++|||||||++|+|++|+.||.
T Consensus       133 ----------~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~  200 (283)
T cd05118         133 ----------TEGVLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP  200 (283)
T ss_pred             ----------CCCcEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence                      467899999999987655431  12234678899999998876 78999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccc-----ccccc--------ccC--CccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGER-----RRFYR--------LID--PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~--------~~~--~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      .........   .....+...     ..+..        ...  ...........+.++.+||.+||+.||.+||++.++
T Consensus       201 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~l  277 (283)
T cd05118         201 GKSEIDQLF---KIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQA  277 (283)
T ss_pred             CCCHHHHHH---HHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHH
Confidence            544321110   100000000     00000        000  000011122346789999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +.+
T Consensus       278 l~~  280 (283)
T cd05118         278 LAH  280 (283)
T ss_pred             hhC
Confidence            874

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=3.5e-38  Score=312.16  Aligned_cols=245  Identities=27%  Similarity=0.396  Sum_probs=196.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~  214 (511)
                      .+||+|+||.||++....         ++..||||.+..........+.+|+.+++.++|+||+++++++..++..++||
T Consensus        26 ~~lg~g~~g~v~~~~~~~---------~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          26 IKIGEGSTGIVCIATVKS---------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             HHcCCCCCeEEEEEEEcC---------CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence            579999999999998865         67899999986554444566889999999999999999999999999999999


Q ss_pred             EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccccc
Q 010432          215 EFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN  294 (511)
Q Consensus       215 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~  294 (511)
                      ||+++++|.+++..  ..+++..+..++.|++.||+|||+++   |+|+||||+||+++                     
T Consensus        97 e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~---------------------  150 (292)
T cd06657          97 EFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLT---------------------  150 (292)
T ss_pred             ecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC---------------------
Confidence            99999999998743  35789999999999999999999998   99999999999998                     


Q ss_pred             ccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCc
Q 010432          295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE  374 (511)
Q Consensus       295 ~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~  374 (511)
                          .++.++|+|||++.........  .....|+..|+|||++.+..++.++|||||||++|+|++|..||....... 
T Consensus       151 ----~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-  223 (292)
T cd06657         151 ----HDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-  223 (292)
T ss_pred             ----CCCCEEEcccccceeccccccc--ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence                4677999999998765432211  223568999999999988889999999999999999999999997532211 


Q ss_pred             hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                        .........          .+.+..  ....+..+.+++.+||+.||.+||++.+++.+
T Consensus       224 --~~~~~~~~~----------~~~~~~--~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         224 --AMKMIRDNL----------PPKLKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             --HHHHHHhhC----------CcccCC--cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence              111111100          000000  01124568899999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-38  Score=306.29  Aligned_cols=244  Identities=26%  Similarity=0.321  Sum_probs=189.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHH-hCCCCCCcceEeeEEEeCCeE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFL-GDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il-~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      +.||+|+||.||+|.+..         +++.||||++.......   ...+..|..++ ..++|+||+++++++..++..
T Consensus         2 ~~l~~g~~~~v~~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   72 (260)
T cd05611           2 KPISKGAFGSVYLAKKRS---------TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYL   72 (260)
T ss_pred             ccCCcCCCeeEEEEEecC---------CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeE
Confidence            569999999999998865         57799999997543221   12344555544 455899999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+   |+|+||+|+|||++                 
T Consensus        73 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~-----------------  131 (260)
T cd05611          73 YLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLID-----------------  131 (260)
T ss_pred             EEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEC-----------------
Confidence            9999999999999998654 46899999999999999999999988   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              ++..+||+|||+++....      .....|+..|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       132 --------~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  197 (260)
T cd05611         132 --------QTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET  197 (260)
T ss_pred             --------CCCcEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC
Confidence                    467899999999986443      123468899999999988889999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ...   .....   ......        .........+..+.+++.+||+.||++||++.++.+.|
T Consensus       198 ~~~---~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         198 PDA---VFDNI---LSRRIN--------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHH---HHHHH---HhcccC--------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            211   11100   000000        01111112357789999999999999999776555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.3e-38  Score=318.77  Aligned_cols=266  Identities=24%  Similarity=0.336  Sum_probs=198.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|.+.+.||+|+||.||+|++..         ++..||||.+....  ......+.+|+.+++.++|+||+++++++.
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~   74 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSE---------TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMP   74 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecC---------CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHhee
Confidence            3579999999999999999998765         67899999987532  222346778999999999999999999886


Q ss_pred             eC-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 ED-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ..     ...||||||+. ++|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++       
T Consensus        75 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~-------  142 (337)
T cd07858          75 PPHREAFNDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLN-------  142 (337)
T ss_pred             cccccccCcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEc-------
Confidence            54     34799999994 7899888543 57899999999999999999999988   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~el  359 (511)
                                        .++.+||+|||+++.......  ......||..|+|||++.. ..++.++|||||||++|+|
T Consensus       143 ------------------~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  202 (337)
T cd07858         143 ------------------ANCDLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAEL  202 (337)
T ss_pred             ------------------CCCCEEECcCccccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHH
Confidence                              467899999999987644321  1233568899999998864 4689999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhh-hc---------ccccccccc----CCccCCCCCHHHHHHHHHHHHHhcccCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPH-LG---------ERRRFYRLI----DPRLEGHFSIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~----~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      ++|+.||.................. ..         ........+    +..+. ......+..+.+||.+||+.||.+
T Consensus       203 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~  281 (337)
T cd07858         203 LGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSK  281 (337)
T ss_pred             HcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhh
Confidence            9999999754321110000000000 00         000000000    00000 011124577899999999999999


Q ss_pred             CCCHHHHHHH
Q 010432          426 RPLMSEVVEA  435 (511)
Q Consensus       426 RPs~~eil~~  435 (511)
                      ||++.+++++
T Consensus       282 Rps~~ell~h  291 (337)
T cd07858         282 RITVEEALAH  291 (337)
T ss_pred             ccCHHHHHcC
Confidence            9999999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=3.4e-38  Score=314.67  Aligned_cols=250  Identities=27%  Similarity=0.377  Sum_probs=198.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .|...+.||+|+||.||+|++..         ++..||||.+......   ...++.+|+.+++.++|+||+++++++..
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   86 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVR---------NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR   86 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcC---------CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc
Confidence            46677889999999999999865         5778999998753222   23467889999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+. |+|.+++......+++..+..++.|++.||.|||+.+   ++||||||+|||++             
T Consensus        87 ~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~-------------  149 (308)
T cd06634          87 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLS-------------  149 (308)
T ss_pred             CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEEC-------------
Confidence            999999999995 6888887655567899999999999999999999988   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                  .++.+||+|||++......      ....|+..|+|||++.   ...++.++|||||||++|+|++|.
T Consensus       150 ------------~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~  211 (308)
T cd06634         150 ------------EPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (308)
T ss_pred             ------------CCCcEEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCC
Confidence                        4678999999998765432      2346889999999875   356788999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .||........  ......              ...........+..+.+||.+||+.+|.+||++.+++.+..-.
T Consensus       212 ~p~~~~~~~~~--~~~~~~--------------~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~  271 (308)
T cd06634         212 PPLFNMNAMSA--LYHIAQ--------------NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (308)
T ss_pred             CCCccccHHHH--HHHHhh--------------cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence            99865321110  000000              0000011123456789999999999999999999999875543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-38  Score=311.71  Aligned_cols=273  Identities=28%  Similarity=0.417  Sum_probs=200.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhC--CCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~H~nIv~l~~~~~  205 (511)
                      .....++++||+|.||+||+|.+.           ++.||||++....   ...|..|-+|.+.  +.|+||++|+++-.
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~-----------~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek  274 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD-----------NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEK  274 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc-----------CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhc
Confidence            356677789999999999999884           5799999997543   3568888888765  48999999999876


Q ss_pred             eCC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeEecccCCCcEEeccc
Q 010432          206 EDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA------ERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       206 ~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~------~~~iiHrDLKp~NILl~~~  275 (511)
                      ..+    .++||+||.+.|+|.+||..+  .++|....+|+.-+++||+|||+..      +++|+|||||..||||.  
T Consensus       275 r~t~~~~eywLVt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK--  350 (534)
T KOG3653|consen  275 RGTADRMEYWLVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK--  350 (534)
T ss_pred             cCCccccceeEEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc--
Confidence            655    789999999999999999653  6899999999999999999999643      46799999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCC-----ccccc
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLT-----SRSDV  349 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~-----~~~DI  349 (511)
                                             .++...|+|||||..+..+.........+||.+|||||++.+. .+.     .+.||
T Consensus       351 -----------------------~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~Dv  407 (534)
T KOG3653|consen  351 -----------------------NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDV  407 (534)
T ss_pred             -----------------------cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHH
Confidence                                   5889999999999887654433333447899999999998753 222     36899


Q ss_pred             hhHHHHHHHHHhCCCCCCC-CCCCCchhHHHhhhhhhcccccccc-ccCCccCCCCCH-----HHHHHHHHHHHHhcccC
Q 010432          350 YSFGVVLLEMLTGRRSMDK-NRPNGEHNLVEWARPHLGERRRFYR-LIDPRLEGHFSI-----KGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~Li~~cl~~d  422 (511)
                      ||+|.|||||+++..-++. ..+.....+...+.. .+.-..+.. .+....++.++.     ....-+.+.+..||+.|
T Consensus       408 YamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~-hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhD  486 (534)
T KOG3653|consen  408 YAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN-HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHD  486 (534)
T ss_pred             HHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC-CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCc
Confidence            9999999999998665542 111111111100000 000000000 011111222221     22467889999999999


Q ss_pred             CCCCCCHHHHHHHhcCCCCC
Q 010432          423 PKARPLMSEVVEALKPLPNL  442 (511)
Q Consensus       423 P~~RPs~~eil~~L~~l~~~  442 (511)
                      |+.|.|+.=+.+.+..+.-+
T Consensus       487 aeARLTA~Cv~eR~~~l~~~  506 (534)
T KOG3653|consen  487 AEARLTAGCVEERMAELMML  506 (534)
T ss_pred             hhhhhhhHHHHHHHHHHhcc
Confidence            99999999888887766544

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.7e-38  Score=305.78  Aligned_cols=248  Identities=23%  Similarity=0.341  Sum_probs=203.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||++.+..         ++..||+|.+......  ....+.+|+.++++++|+||+++++++...
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLS---------DNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG   71 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECC---------CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC
Confidence            47888999999999999998765         5779999999764322  234678899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...++||||+++++|.+++...   ...+++..++.++.|++.||.|||+.+   ++|+||+|+||+++           
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~-----------  137 (256)
T cd08530          72 NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLV-----------  137 (256)
T ss_pred             CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEe-----------
Confidence            9999999999999999998652   346889999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    ++..+||+|||++.......    .....|+..|+|||.+.+..++.++|+||||+++|||++|+.
T Consensus       138 --------------~~~~~kl~d~g~~~~~~~~~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~  199 (256)
T cd08530         138 --------------ANDLVKIGDLGISKVLKKNM----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAP  199 (256)
T ss_pred             --------------cCCcEEEeeccchhhhccCC----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                          46779999999998765531    222468899999999998899999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   .+.....              .......+...+.++.+++.+||+.+|++||++.+++++
T Consensus       200 p~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         200 PFEARSMQ---DLRYKVQ--------------RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCCCCCHH---HHHHHHh--------------cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            99754321   1111000              001112223456789999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.9e-38  Score=316.11  Aligned_cols=269  Identities=28%  Similarity=0.330  Sum_probs=197.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.++||+|+||.||+|.+..         ++..||||++......  ....+.+|+++++.++|+||+++++++.
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   77 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIK---------TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAV   77 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECC---------CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhhee
Confidence            4689999999999999999999865         5779999998654322  2245778999999999999999999875


Q ss_pred             eCC--------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          206 EDD--------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       206 ~~~--------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ...        .+++||||+. ++|...+......+++..+..++.||+.||.|||+++   |+|+||||+|||++    
T Consensus        78 ~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~----  149 (311)
T cd07866          78 ERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILID----  149 (311)
T ss_pred             cccccccccCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC----
Confidence            433        4699999995 5788887666667999999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc---------eeeeeccccccccCCccccc-CCCCccc
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---------HVSTRVMGTYGYAAPEYVMT-GHLTSRS  347 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---------~~~~~~~Gt~~y~aPE~~~~-~~~~~~~  347 (511)
                                           +++.+||+|||+++........         ...+...|++.|+|||++.+ ..++.++
T Consensus       150 ---------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  208 (311)
T cd07866         150 ---------------------NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV  208 (311)
T ss_pred             ---------------------CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchh
Confidence                                 4778999999999865432211         11123467889999998765 4588999


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhh-----cccccccc--------ccCCccCCCCCHHHHHHHHHH
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL-----GERRRFYR--------LIDPRLEGHFSIKGAQKAAQL  414 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~L  414 (511)
                      |||||||++|||++|++||.+.........+.......     ........        ...+.+...+ ......+.+|
T Consensus       209 Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  287 (311)
T cd07866         209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDL  287 (311)
T ss_pred             HhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHH
Confidence            99999999999999999997644322111111000000     00000000        0000000000 1123578899


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 010432          415 AAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.+||+.||.+|||+.+++.+
T Consensus       288 i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         288 LSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHHcccCcccCcCHHHHhcC
Confidence            999999999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-39  Score=311.33  Aligned_cols=264  Identities=24%  Similarity=0.329  Sum_probs=202.7

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cc------cHHHHHHHHHHHhCCCCCCcc
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQ------GHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~------~~~~~~~E~~il~~l~H~nIv  198 (511)
                      ...++|-++.+||+|||+.||+|.+..         ..+.||||+-..+. ..      ..+...+|.+|.+.|+||.||
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~---------EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIV  530 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLT---------EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIV  530 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccc---------hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceee
Confidence            345688899999999999999998875         46699999865432 11      123467899999999999999


Q ss_pred             eEeeEEEe-CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          199 KLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       199 ~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ++|+||.- .+.+|-|+|||+|.+|.-||... ..+++..+..|+.||+.||.||.... +||||-||||.||||.... 
T Consensus       531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~Gt-  607 (775)
T KOG1151|consen  531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGT-  607 (775)
T ss_pred             eeeeeeeeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCc-
Confidence            99999864 57789999999999999888544 47899999999999999999999876 8899999999999997422 


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCcccccC----CCCcccc
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMTG----HLTSRSD  348 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~~----~~~~~~D  348 (511)
                                           -.+.+||+||||++.+.......     ......||.+|++||.+.-+    ..+.|+|
T Consensus       608 ---------------------acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVD  666 (775)
T KOG1151|consen  608 ---------------------ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVD  666 (775)
T ss_pred             ---------------------ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCcccccee
Confidence                                 25679999999999876654432     23457899999999988633    5688999


Q ss_pred             chhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       349 IwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||.|||+|..+.|+.||......  ..+.+..        .+.....  ......+..+.++.++|++||++.-++|..
T Consensus       667 VWSvGVIFyQClYGrKPFGhnqsQ--QdILqeN--------TIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~D  734 (775)
T KOG1151|consen  667 VWSVGVIFYQCLYGRKPFGHNQSQ--QDILQEN--------TILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRID  734 (775)
T ss_pred             eEeeehhhhhhhccCCCCCCchhH--HHHHhhh--------chhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhh
Confidence            999999999999999999754321  1111110        0000000  000111234678899999999999999988


Q ss_pred             HHHHHH
Q 010432          429 MSEVVE  434 (511)
Q Consensus       429 ~~eil~  434 (511)
                      ..++..
T Consensus       735 V~qLA~  740 (775)
T KOG1151|consen  735 VQQLAC  740 (775)
T ss_pred             HHHHcc
Confidence            777654

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.4e-38  Score=301.44  Aligned_cols=248  Identities=31%  Similarity=0.491  Sum_probs=203.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||+|+||.||+|.+..         ++..||+|.+.....  .....+.+|++++.+++|+||+++++++...
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLE---------TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS   71 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcC---------CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC
Confidence            47888999999999999998765         567999999987654  2345788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+++++|.+++... ..+++..+..++.|++.||.|||+++   |+||||||+||+++              
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~--------------  133 (254)
T cd06627          72 DSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTT--------------  133 (254)
T ss_pred             CEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEC--------------
Confidence            9999999999999999998654 57899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.++|+|||++.........  .....|+..|+|||.+.+..++.++||||||+++|+|++|..||.
T Consensus       134 -----------~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~  200 (254)
T cd06627         134 -----------KDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYY  200 (254)
T ss_pred             -----------CCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence                       3678999999999876554321  223568999999999888788999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      .....  ....   .....        .    ...++...+..+.+++.+||..+|++||++.+++.
T Consensus       201 ~~~~~--~~~~---~~~~~--------~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         201 DLNPM--AALF---RIVQD--------D----HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CccHH--HHHH---HHhcc--------C----CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            54311  0000   00000        0    11112223577899999999999999999999985

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=2.9e-38  Score=319.79  Aligned_cols=268  Identities=24%  Similarity=0.296  Sum_probs=197.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC-
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED-  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~-  207 (511)
                      .+|.+.+.||.|+||.||+|....         ++..||+|.+........+.+.+|+.++++++||||+++++++... 
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~---------~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~   75 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSD---------CDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSG   75 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECC---------CCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccc
Confidence            689999999999999999998865         6789999999776655556788999999999999999999876543 


Q ss_pred             -------------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          208 -------------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       208 -------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                                   ...++||||+. ++|.+++..  ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~  149 (342)
T cd07854          76 SDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINT  149 (342)
T ss_pred             cccccccccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcC
Confidence                         35789999996 699888743  36889999999999999999999998   999999999999974


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCccccc-CCCCccccchhH
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSF  352 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSl  352 (511)
                                              ++..+||+|||+++......... ......|+..|+|||++.. ..++.++|||||
T Consensus       150 ------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSl  205 (342)
T cd07854         150 ------------------------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA  205 (342)
T ss_pred             ------------------------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHH
Confidence                                    35678999999997653321111 1122457889999998754 568899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhc--cccccccccC-----CccCCC-----CCHHHHHHHHHHHHHhcc
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG--ERRRFYRLID-----PRLEGH-----FSIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~Li~~cl~  420 (511)
                      ||++|+|++|+.||................+...  ....+.....     ......     +....+.++.+|+.+||+
T Consensus       206 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  285 (342)
T cd07854         206 GCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILT  285 (342)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhC
Confidence            9999999999999975543211111000000000  0000000000     000000     001234678899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 010432          421 RDPKARPLMSEVVEA  435 (511)
Q Consensus       421 ~dP~~RPs~~eil~~  435 (511)
                      .||.+||++.+++.+
T Consensus       286 ~dP~~R~t~~ell~h  300 (342)
T cd07854         286 FNPMDRLTAEEALMH  300 (342)
T ss_pred             CCchhccCHHHHhCC
Confidence            999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.4e-37  Score=307.24  Aligned_cols=255  Identities=27%  Similarity=0.348  Sum_probs=196.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      +|++.+.||.|+||.||+|+.....      .+|..||+|+++....    ...+.+.+|+.+|.++ +|+||+++++++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~------~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~   74 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGH------DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF   74 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCC------CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe
Confidence            4788899999999999999875321      2578999999975422    2235678899999999 699999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..+...++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+   ++||||||+|||++           
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~-----------  139 (290)
T cd05613          75 QTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLD-----------  139 (290)
T ss_pred             ecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEC-----------
Confidence            9999999999999999999998654 46888999999999999999999988   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc--CCCCccccchhHHHHHHHHHhC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~elltg  362 (511)
                                    +++.+||+|||++......... ......|+..|+|||++..  ..++.++|||||||++|+|++|
T Consensus       140 --------------~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g  204 (290)
T cd05613         140 --------------SNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG  204 (290)
T ss_pred             --------------CCCCEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcC
Confidence                          4778999999999865432211 1223568999999999875  3478899999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVE  434 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~  434 (511)
                      ..||........  ...........            ...++...+..+.+|+.+||+.||++||     ++.+++.
T Consensus       205 ~~p~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         205 ASPFTVDGEKNS--QAEISRRILKS------------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             CCCCCcCCcccc--HHHHHHHhhcc------------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            999964322111  11111110000            0111222356788999999999999997     5666655

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=6.4e-38  Score=310.75  Aligned_cols=254  Identities=30%  Similarity=0.435  Sum_probs=196.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|.+..         +++.||||.++..... ....+.+|+.++.++ .|+||+++++++.
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~   84 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKK---------TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI   84 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECC---------CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee
Confidence            4678899999999999999999865         5779999999764322 234567788777777 4999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .....++||||+ +++|.+++......+++..+..++.||+.||+|||+ ++   |+||||+|+|||++           
T Consensus        85 ~~~~~~~v~e~~-~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~-----------  149 (296)
T cd06618          85 TDSDVFICMELM-STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLD-----------  149 (296)
T ss_pred             cCCeEEEEeecc-CcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEc-----------
Confidence            999999999998 458887776555578999999999999999999997 46   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC----CCccccchhHHHHHHHHH
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH----LTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DIwSlGvil~ell  360 (511)
                                    +++.+||+|||++........   .....|+..|+|||++.+..    ++.++|||||||++|+|+
T Consensus       150 --------------~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~  212 (296)
T cd06618         150 --------------ASGNVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA  212 (296)
T ss_pred             --------------CCCCEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH
Confidence                          477899999999976543222   12245788999999987543    889999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +|+.||......  ......   .....       .+...  .....+..+.+|+.+||+.||.+||++.+++++.
T Consensus       213 ~g~~p~~~~~~~--~~~~~~---~~~~~-------~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         213 TGQFPYKNCKTE--FEVLTK---ILQEE-------PPSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             hCCCCCCcchhH--HHHHHH---HhcCC-------CCCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence            999999643211  011100   00000       00000  0012356789999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.6e-38  Score=305.37  Aligned_cols=247  Identities=26%  Similarity=0.382  Sum_probs=195.4

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||.|+||.||+|++..         +|+.||+|++.....   .....+.+|++++++++|+||+++++.+..+...|+|
T Consensus         1 lg~g~~~~vy~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   71 (265)
T cd05579           1 ISKGAYGRVFLAKKKS---------TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLV   71 (265)
T ss_pred             CCCCCceEEEEEEECC---------CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEE
Confidence            6899999999999865         578999999976543   2345688999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++++|.+++.+.. .+++..+..++.||+.||+|||+++   |+|+||+|+|||++                    
T Consensus        72 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~--------------------  127 (265)
T cd05579          72 MEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILID--------------------  127 (265)
T ss_pred             EecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEc--------------------
Confidence            99999999999986544 7899999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCc------ceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDK------THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~------~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                           +++.++|+|||++........      ........++..|+|||++....++.++||||||+++|+|++|..||.
T Consensus       128 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~  202 (265)
T cd05579         128 -----SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH  202 (265)
T ss_pred             -----CCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence                 477899999999886543321      111233568899999999988889999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ......   .....   ......        ....  ...+..+.+|+.+||+.+|.+||++..+.+.|+
T Consensus       203 ~~~~~~---~~~~~---~~~~~~--------~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         203 GETPEE---IFQNI---LNGKIE--------WPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CCCHHH---HHHHH---hcCCcC--------CCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            543211   11100   000000        0000  012577899999999999999999955555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=7e-38  Score=316.06  Aligned_cols=265  Identities=25%  Similarity=0.300  Sum_probs=196.6

Q ss_pred             cCCCC-CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--------------HHHHHHHHHHHhCCC
Q 010432          129 RNFRP-ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--------------HKEWLAEVNFLGDLV  193 (511)
Q Consensus       129 ~~y~~-~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--------------~~~~~~E~~il~~l~  193 (511)
                      ++|.. .+.||.|+||+||+|.+..         +++.||||.+.......              ...+.+|+.+++.++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   78 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTL---------TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK   78 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECC---------CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC
Confidence            45654 4679999999999998765         57799999987543221              124778999999999


Q ss_pred             CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       194 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      |+||+++++++...+..++||||+. |+|.+++.. ...+++.....++.||+.||.|||+.+   |+|+||||+|||++
T Consensus        79 h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~  153 (335)
T PTZ00024         79 HENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFIN  153 (335)
T ss_pred             CcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEEC
Confidence            9999999999999999999999995 699998854 346899999999999999999999988   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc------------ceeeeeccccccccCCcccccC
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK------------THVSTRVMGTYGYAAPEYVMTG  341 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~------------~~~~~~~~Gt~~y~aPE~~~~~  341 (511)
                                               .++.+||+|||++........            ........++..|+|||++.+.
T Consensus       154 -------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  208 (335)
T PTZ00024        154 -------------------------SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA  208 (335)
T ss_pred             -------------------------CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC
Confidence                                     467899999999986541110            0011223568899999998764


Q ss_pred             -CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc--cccc------------cccCCccCCCCCHH
Q 010432          342 -HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER--RRFY------------RLIDPRLEGHFSIK  406 (511)
Q Consensus       342 -~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~------------~~~~~~~~~~~~~~  406 (511)
                       .++.++|||||||++|||++|..||.........   ..+.......  ..+.            ......+. .....
T Consensus       209 ~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  284 (335)
T PTZ00024        209 EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL---GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPN  284 (335)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcC
Confidence             4789999999999999999999999765432111   1111000000  0000            00000000 00112


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          407 GAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       407 ~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .+..+.+|+.+||+.+|++||++.+++.+-
T Consensus       285 ~~~~~~~li~~~l~~~P~~R~s~~~~l~~~  314 (335)
T PTZ00024        285 ASDDAIDLLQSLLKLNPLERISAKEALKHE  314 (335)
T ss_pred             CChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence            256788999999999999999999999754

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.3e-38  Score=317.67  Aligned_cols=267  Identities=25%  Similarity=0.329  Sum_probs=201.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +|++.+.||.|+||.||+|++..         ++..||||.+....  ....+.+.+|+.+++.++|+||+++++++...
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKR---------TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPP   71 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCC---------CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhccc
Confidence            58889999999999999999765         57799999997643  23345788999999999999999999998876


Q ss_pred             C-----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          208 D-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       208 ~-----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +     ..|+||||+. ++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++         
T Consensus        72 ~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~---------  137 (330)
T cd07834          72 SPEDFNDVYIVTELME-TDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVN---------  137 (330)
T ss_pred             CcccccceEEEecchh-hhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEc---------
Confidence            5     7899999996 5899888554 37899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~ell  360 (511)
                                      +++.++|+|||++......... .......+|..|+|||++.+. .++.++|||||||++|+|+
T Consensus       138 ----------------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~  201 (330)
T cd07834         138 ----------------SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL  201 (330)
T ss_pred             ----------------CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHH
Confidence                            4788999999999876553210 112334689999999999877 8899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhc-------ccccccccc---CCccC---CCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLG-------ERRRFYRLI---DPRLE---GHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~---~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      +|..||...........+........       ........+   .....   .......+..+.+||.+||+.+|.+||
T Consensus       202 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  281 (330)
T cd07834         202 TRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRI  281 (330)
T ss_pred             cCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCC
Confidence            99999976543211111000000000       000000000   00000   000112356789999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+++.+
T Consensus       282 t~~~ll~~  289 (330)
T cd07834         282 TADEALAH  289 (330)
T ss_pred             CHHHHHhC
Confidence            99999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-40  Score=298.20  Aligned_cols=271  Identities=26%  Similarity=0.351  Sum_probs=208.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC--CcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..|+-..+||+|.||.||+|+.++         +|+.||+|++--+  ...-....++|+++|..|.|+|++.++..|..
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n---------~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~t   87 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKN---------TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT   87 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcC---------ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhh
Confidence            346666789999999999999876         6788999876432  22223567899999999999999999988753


Q ss_pred             --------CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          207 --------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       207 --------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                              ...+||||.+|+. ||..+|......++...+.+++.++..||.|+|.+.   |+|||+||+|+||+     
T Consensus        88 k~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt-----  158 (376)
T KOG0669|consen   88 KATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLIT-----  158 (376)
T ss_pred             ccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEc-----
Confidence                    2347999999965 999999877788999999999999999999999998   99999999999999     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCccccc-CCCCccccchhHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV  355 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvi  355 (511)
                                          .++.+||+|||+++.+......  ...+..+-|.+|++||.+.+ ..|+++.|||..|||
T Consensus       159 --------------------~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCi  218 (376)
T KOG0669|consen  159 --------------------KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCI  218 (376)
T ss_pred             --------------------CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHH
Confidence                                4889999999999865432221  12334566999999999886 579999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhc-----ccc--cccccc--CCccCCCCCH--------HHHHHHHHHHHHh
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-----ERR--RFYRLI--DPRLEGHFSI--------KGAQKAAQLAAHC  418 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~--~~~~~~~~~~--------~~~~~~~~Li~~c  418 (511)
                      +.||+||.+.|.+........++...+....     +..  .+++.+  .|...+.+..        .-.+++.+|+.++
T Consensus       219 maeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~l  298 (376)
T KOG0669|consen  219 MAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKL  298 (376)
T ss_pred             HHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHH
Confidence            9999999999998876655555554443221     111  111111  1111111110        1135788999999


Q ss_pred             cccCCCCCCCHHHHHHHhc
Q 010432          419 LSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       419 l~~dP~~RPs~~eil~~L~  437 (511)
                      |..||.+|+.+++++++--
T Consensus       299 l~~DP~kR~~ad~alnh~~  317 (376)
T KOG0669|consen  299 LKLDPTKRIDADQALNHDF  317 (376)
T ss_pred             hccCcccCcchHhhhchhh
Confidence            9999999999999998754

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.5e-37  Score=310.58  Aligned_cols=256  Identities=23%  Similarity=0.268  Sum_probs=188.5

Q ss_pred             CCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEEccC
Q 010432          141 GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP  218 (511)
Q Consensus       141 ~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~  218 (511)
                      ++|.||.++...         +++.||||+++...  ......+.+|+.+++.++|+||+++++++...+..+++|||++
T Consensus        12 ~~~~v~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~   82 (314)
T cd08216          12 DLMIVHLAKHKP---------TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA   82 (314)
T ss_pred             CCceEEEEEecC---------CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence            444555555443         57899999997652  2334578899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccc
Q 010432          219 RGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML  297 (511)
Q Consensus       219 ~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~  297 (511)
                      +|+|.+++... ...+++..+..++.||+.||.|||+++   |+||||||+|||++                        
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~------------------------  135 (314)
T cd08216          83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLS------------------------  135 (314)
T ss_pred             CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEe------------------------
Confidence            99999998753 346889999999999999999999998   99999999999998                        


Q ss_pred             cccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          298 FQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       298 ~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                       .++.+||+|||.+.........     .......++..|+|||++..  ..++.++|||||||++|||++|..||....
T Consensus       136 -~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~  214 (314)
T cd08216         136 -GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP  214 (314)
T ss_pred             -cCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence             4678999999998755332211     01123457889999999875  468899999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhcc----------cccccc----ccC----CccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          371 PNGEHNLVEWARPHLGE----------RRRFYR----LID----PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~----------~~~~~~----~~~----~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ...  ............          ......    ...    ...........+.++.+|+.+||+.||++|||+.++
T Consensus       215 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  292 (314)
T cd08216         215 ATQ--MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQL  292 (314)
T ss_pred             HHH--HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHH
Confidence            211  111111100000          000000    000    001111223446788999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       293 l~~  295 (314)
T cd08216         293 LNH  295 (314)
T ss_pred             hcC
Confidence            974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=5.9e-38  Score=304.68  Aligned_cols=249  Identities=22%  Similarity=0.294  Sum_probs=195.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---c--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---L--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      +|.+.+.||+|+||.||++++..         ++..+++|+++...   .  .....+.+|+.++++++||||+++++++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKK---------AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF   71 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecC---------CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence            47888999999999999998765         33456666655321   1  1223567899999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .+....++||||+++++|.+++..   ....+++..++.++.|++.||.|||+.+   |+|+||||+||+++        
T Consensus        72 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~--------  140 (260)
T cd08222          72 LERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLK--------  140 (260)
T ss_pred             hcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEee--------
Confidence            999999999999999999988853   3456899999999999999999999988   99999999999997        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                        +..+||+|||++........  ......|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus       141 ------------------~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~  200 (260)
T cd08222         141 ------------------NNLLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC  200 (260)
T ss_pred             ------------------cCCEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence                              34599999999987644322  1223568899999999988889999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..||......   ...   ....       ..    .....+...+..+.++|.+||..||++||++.+++++
T Consensus       201 ~~~~~~~~~~~---~~~---~~~~-------~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         201 LAHAFEGQNFL---SVV---LRIV-------EG----PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             CCCCCCCccHH---HHH---HHHH-------cC----CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            99999643211   111   0000       00    0111233446788999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-37  Score=304.71  Aligned_cols=262  Identities=24%  Similarity=0.301  Sum_probs=195.9

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCC---CCCCcceEeeEEE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDL---VHLNLVKLIGYCI  205 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l---~H~nIv~l~~~~~  205 (511)
                      |++.+.||+|+||.||+|+++.         ++..||||+++.....  ....+.+|+.+++++   +|+||+++++++.
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~   71 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLN---------TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCH   71 (287)
T ss_pred             CeEEEEecccCceEEEEEEECC---------CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEe
Confidence            5677899999999999999865         5779999999754322  123466788777665   6999999999998


Q ss_pred             eCCe-----EEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDDQ-----RLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~~-----~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..+.     .+++|||+. ++|.+++.... ..+++..++.++.||+.||.|||+.+   |+|+||+|+|||++      
T Consensus        72 ~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~------  141 (287)
T cd07838          72 GPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVT------  141 (287)
T ss_pred             eccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEc------
Confidence            8776     899999996 58999886543 35899999999999999999999988   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         +++.+||+|||++........   .....++..|+|||++.+..++.++|||||||++|||
T Consensus       142 -------------------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l  199 (287)
T cd07838         142 -------------------SDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL  199 (287)
T ss_pred             -------------------cCCCEEEeccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHH
Confidence                               467899999999987644322   1224578999999999988999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhc-ccccc-------ccccCCcc---CCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLG-ERRRF-------YRLIDPRL---EGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~---~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      ++|..||........  +......... ....+       ........   ........+..+.+|+.+||+.||.+||+
T Consensus       200 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~  277 (287)
T cd07838         200 FRRRPLFRGTSEADQ--LDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS  277 (287)
T ss_pred             HhCCCcccCCChHHH--HHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC
Confidence            999999976433211  1111100000 00000       00000000   01111233577889999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.+++.+
T Consensus       278 ~~~il~~  284 (287)
T cd07838         278 AFEALQH  284 (287)
T ss_pred             HHHHhcC
Confidence            9999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-38  Score=306.35  Aligned_cols=266  Identities=29%  Similarity=0.432  Sum_probs=203.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhC--CCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~H~nIv~l~~~~  204 (511)
                      ..++..+.+.||+|.||.||+|+|+           |..||||++....   ...|.+|.+|.+.  |+|+||+.|++.-
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~wr-----------Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD  274 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRWR-----------GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAAD  274 (513)
T ss_pred             hhheeEEEEEecCccccceeecccc-----------CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence            4567888999999999999999995           7799999997543   3568899888865  5999999999876


Q ss_pred             EeC----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCCeEecccCCCcEEeccc
Q 010432          205 IED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH-----EEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       205 ~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH-----~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      ..+    ..+|||.+|.+.|+|++||.+  ..++....++++.-+|.||+|||     .+|++.|.|||||..|||+.  
T Consensus       275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK--  350 (513)
T KOG2052|consen  275 NKDNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--  350 (513)
T ss_pred             ccCCCceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc--
Confidence            544    367999999999999999966  47899999999999999999999     45778899999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccC----CC--Cccc
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTG----HL--TSRS  347 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~----~~--~~~~  347 (511)
                                             .++.+.|+|+|||.........  ...+..+||.+|||||++...    .+  -..+
T Consensus       351 -----------------------kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~A  407 (513)
T KOG2052|consen  351 -----------------------KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRA  407 (513)
T ss_pred             -----------------------cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHH
Confidence                                   4888999999999865543221  123346899999999998642    12  1358


Q ss_pred             cchhHHHHHHHHHhC----------CCCCCCCCCCCchhHHHhhhhhhcccccc--ccccCCccCCC-CCHHHHHHHHHH
Q 010432          348 DVYSFGVVLLEMLTG----------RRSMDKNRPNGEHNLVEWARPHLGERRRF--YRLIDPRLEGH-FSIKGAQKAAQL  414 (511)
Q Consensus       348 DIwSlGvil~elltg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~L  414 (511)
                      ||||||+|+||+..+          +.||++..+.+-         .+.+....  .+-+.|.+... .+.+....+.+|
T Consensus       408 DIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP---------s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~kl  478 (513)
T KOG2052|consen  408 DIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP---------SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKL  478 (513)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC---------CHHHHhcceeecccCCCCCcccccCHHHHHHHHH
Confidence            999999999999863          567765443321         01111100  01112222221 234556788899


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcCCCCC
Q 010432          415 AAHCLSRDPKARPLMSEVVEALKPLPNL  442 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~L~~l~~~  442 (511)
                      |+.||..||..|-|+-.|-+.|.++.+.
T Consensus       479 MkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  479 MKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             HHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            9999999999999999999999877643

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.5e-37  Score=306.76  Aligned_cols=259  Identities=27%  Similarity=0.345  Sum_probs=200.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      +|++.+.||+|+||.||+++.....      .++..||||+++....    .....+.+|+.++.++ +|+||+++++++
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~   74 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGH------DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF   74 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccc------cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee
Confidence            4778889999999999999865322      2577899999975422    2234578899999999 699999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..+...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+   ++||||||+|||++           
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~-----------  139 (288)
T cd05583          75 QTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLD-----------  139 (288)
T ss_pred             ecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEEC-----------
Confidence            9999999999999999999998654 46889999999999999999999988   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC--CCccccchhHHHHHHHHHhC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DIwSlGvil~elltg  362 (511)
                                    .++.++|+|||+++........ ......|+..|+|||++.+..  ++.++||||||+++|||++|
T Consensus       140 --------------~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg  204 (288)
T cd05583         140 --------------SEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG  204 (288)
T ss_pred             --------------CCCCEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhC
Confidence                          4677999999999875443221 122346899999999987654  78899999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ..||........  ...........        .+    ..+...+..+.+++.+||+.||++|||+.++.+.|+.
T Consensus       205 ~~p~~~~~~~~~--~~~~~~~~~~~--------~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         205 ASPFTVDGEQNS--QSEISRRILKS--------KP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             CCCcccCcccch--HHHHHHHHHcc--------CC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            999964322111  11111111000        01    1112234678999999999999999998888776653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6e-38  Score=337.65  Aligned_cols=269  Identities=29%  Similarity=0.458  Sum_probs=213.2

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       124 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      +++..++..+.+.||+|.||.|++|.........  ......||||.++..... ..+.+..|+++|+.+ .|+|||.++
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~--~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~ll  368 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKAL--LSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLL  368 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeeccccc--ccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhe
Confidence            4445556667779999999999999876422211  112568999999876543 446789999999999 699999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFK  266 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLK  266 (511)
                      |+|......++|+|||..|+|.++|....               ..+.....+.++.|||.||+||++..   +|||||.
T Consensus       369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLA  445 (609)
T KOG0200|consen  369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLA  445 (609)
T ss_pred             eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhh
Confidence            99999999999999999999999997654               34888999999999999999999988   9999999


Q ss_pred             CCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccc--cccccCCcccccCCCC
Q 010432          267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMG--TYGYAAPEYVMTGHLT  344 (511)
Q Consensus       267 p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~G--t~~y~aPE~~~~~~~~  344 (511)
                      .+|||+.                         ++..+||+|||+|+.......+.... ..|  ...|||||.+....|+
T Consensus       446 aRNVLi~-------------------------~~~~~kIaDFGlar~~~~~~~y~~~~-~~~~LP~kWmApEsl~~~~ft  499 (609)
T KOG0200|consen  446 ARNVLIT-------------------------KNKVIKIADFGLARDHYNKDYYRTKS-SAGTLPVKWMAPESLFDRVFT  499 (609)
T ss_pred             hhhEEec-------------------------CCCEEEEccccceeccCCCCceEecC-CCCccceeecCHHHhccCccc
Confidence            9999999                         47789999999999766655443221 122  4569999999999999


Q ss_pred             ccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          345 SRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       345 ~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      .++|||||||+||||+| |..||.+...  ...+.+              .+....+...+..+..++.+||+.||+.+|
T Consensus       500 ~kSDVWSfGI~L~EifsLG~~PYp~~~~--~~~l~~--------------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p  563 (609)
T KOG0200|consen  500 SKSDVWSFGILLWEIFTLGGTPYPGIPP--TEELLE--------------FLKEGNRMEQPEHCSDEIYDLMKSCWNADP  563 (609)
T ss_pred             ccchhhHHHHHHHHHhhCCCCCCCCCCc--HHHHHH--------------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCc
Confidence            99999999999999999 6788865211  111111              122222333444567889999999999999


Q ss_pred             CCCCCHHHHHHHhcCC
Q 010432          424 KARPLMSEVVEALKPL  439 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l  439 (511)
                      ++||++.++.+.|+.+
T Consensus       564 ~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  564 EDRPTFSECVEFFEKH  579 (609)
T ss_pred             ccCCCHHHHHHHHHHH
Confidence            9999999999998874

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=5.1e-38  Score=307.97  Aligned_cols=251  Identities=27%  Similarity=0.351  Sum_probs=203.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCC-CCCcceEeeEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLV-HLNLVKLIGYC  204 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~-H~nIv~l~~~~  204 (511)
                      ++|.+.+.||+|+||.||+|....         ++..||+|++.....   .....+.+|+.++.++. |+||+++++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~   71 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKE---------TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF   71 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcC---------CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh
Confidence            368899999999999999998865         577999999976432   22346788999999998 99999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..++..++||||+++++|.+++... ..+++..++.++.|++.||.|||+++   ++|+||||+||+++           
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~-----------  136 (280)
T cd05581          72 QDEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLD-----------  136 (280)
T ss_pred             cCCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEEC-----------
Confidence            9999999999999999999999654 37999999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcc------------------eeeeeccccccccCCcccccCCCCcc
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT------------------HVSTRVMGTYGYAAPEYVMTGHLTSR  346 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~------------------~~~~~~~Gt~~y~aPE~~~~~~~~~~  346 (511)
                                    .++.++|+|||++.........                  .......|+..|+|||++....++.+
T Consensus       137 --------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~  202 (280)
T cd05581         137 --------------KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKS  202 (280)
T ss_pred             --------------CCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChh
Confidence                          4778999999999865443211                  11223568899999999988889999


Q ss_pred             ccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       347 ~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      +|||||||++|+|++|+.||.......   .....   ..            ....++...++.+.+|+.+||+.||.+|
T Consensus       203 ~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~---~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~R  264 (280)
T cd05581         203 SDLWALGCIIYQMLTGKPPFRGSNEYL---TFQKI---LK------------LEYSFPPNFPPDAKDLIEKLLVLDPQDR  264 (280)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHH---Hh------------cCCCCCCccCHHHHHHHHHHhcCCHhhC
Confidence            999999999999999999997543110   00000   00            0111222235778999999999999999


Q ss_pred             CCH----HHHHHH
Q 010432          427 PLM----SEVVEA  435 (511)
Q Consensus       427 Ps~----~eil~~  435 (511)
                      |++    .+++++
T Consensus       265 ~~~~~~~~~ll~~  277 (280)
T cd05581         265 LGVNEGYDELKAH  277 (280)
T ss_pred             CCcccCHHHHhcC
Confidence            999    787764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=305.47  Aligned_cols=264  Identities=27%  Similarity=0.370  Sum_probs=197.7

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCC-CCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~  208 (511)
                      |++.+.||+|+||.||+|+...         +++.||||.+...... ......+|+..+++++ |+||+++++++..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~---------~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   71 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKE---------TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND   71 (283)
T ss_pred             CeeheeeccCCceEEEEEEECC---------CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC
Confidence            6678899999999999999865         5779999998754322 2234567999999999 999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..++||||+ +|+|.+++.... ..+++..++.++.|++.||.|||+++   |+|+||+|+||+++              
T Consensus        72 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~--------------  133 (283)
T cd07830          72 ELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVS--------------  133 (283)
T ss_pred             cEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEc--------------
Confidence            999999999 889999886543 46899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 +++.++|+|||++........   .....|+..|+|||++. ...++.++||||||+++|||++|+.||
T Consensus       134 -----------~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~  199 (283)
T cd07830         134 -----------GPEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLF  199 (283)
T ss_pred             -----------CCCCEEEeecccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCcc
Confidence                       478899999999986644322   22346889999999885 456789999999999999999999999


Q ss_pred             CCCCCCCchhH-HHhhhhh----hccccccccccCCccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          367 DKNRPNGEHNL-VEWARPH----LGERRRFYRLIDPRLE-------GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ........... .......    +.+........+..+.       .......+..+.+|+.+||+.||++||++.|++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         200 PGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             CCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            76533211100 0000000    0000000000000000       0000111467899999999999999999999986


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       280 ~  280 (283)
T cd07830         280 H  280 (283)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1.4e-37  Score=313.48  Aligned_cols=269  Identities=24%  Similarity=0.293  Sum_probs=193.2

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      +|++.+.||+|+||.||++++....       .+..||||++.....  .....+.+|+.+++++ +|+||+++++++..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   73 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETS-------EEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIV   73 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCC-------cCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeee
Confidence            4778889999999999999986521       167899999875321  2235678899999999 59999999987543


Q ss_pred             C----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 D----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .    ...+++|||+. ++|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+|||++         
T Consensus        74 ~~~~~~~~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~---------  139 (332)
T cd07857          74 FPGNFNELYLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVN---------  139 (332)
T ss_pred             ccccCCcEEEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEc---------
Confidence            2    45789999984 699998854 457899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCccccc-CCCCccccchhHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~el  359 (511)
                                      .++.+||+|||+++........  .......||..|+|||++.+ ..++.++|||||||++|+|
T Consensus       140 ----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l  203 (332)
T cd07857         140 ----------------ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAEL  203 (332)
T ss_pred             ----------------CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence                            4678999999999865432211  11223578999999998765 5689999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhh--------hh-ccc-ccccccc---CCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARP--------HL-GER-RRFYRLI---DPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~--------~~-~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      ++|..||.................        .+ ... ..+....   ............+..+.+|+.+||+.||.+|
T Consensus       204 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  283 (332)
T cd07857         204 LGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKR  283 (332)
T ss_pred             HhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccC
Confidence            999999975432111000000000        00 000 0000000   0000000011124678999999999999999


Q ss_pred             CCHHHHHHH
Q 010432          427 PLMSEVVEA  435 (511)
Q Consensus       427 Ps~~eil~~  435 (511)
                      |++.+++.+
T Consensus       284 ~t~~~ll~~  292 (332)
T cd07857         284 ISVEEALEH  292 (332)
T ss_pred             CCHHHHhcC
Confidence            999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.8e-38  Score=316.30  Aligned_cols=262  Identities=24%  Similarity=0.342  Sum_probs=193.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..+|.+.+.||+|+||.||+|.+..         +|..||||++.....  .....+.+|+.++++++|+||+++++++.
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~   84 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKR---------TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFT   84 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCC---------CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheec
Confidence            3689999999999999999998765         678999999875422  12345789999999999999999999987


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ...      ..++||||+. .+|..++   ...+++..+..++.||+.||+|||+++   |+||||||+|||++      
T Consensus        85 ~~~~~~~~~~~~lv~e~~~-~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~------  151 (342)
T cd07879          85 SAVSGDEFQDFYLVMPYMQ-TDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVN------  151 (342)
T ss_pred             ccccCCCCceEEEEecccc-cCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC------
Confidence            542      4689999995 4777765   236889999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+++......     ....||..|+|||++.+ ..++.++|||||||++||
T Consensus       152 -------------------~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~e  207 (342)
T cd07879         152 -------------------EDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAE  207 (342)
T ss_pred             -------------------CCCCEEEeeCCCCcCCCCCC-----CCceeeecccChhhhcCccccCchHHHHHHHHHHHH
Confidence                               47789999999998653321     23467889999999876 468999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhh--------hhccc--cccccccCCccCCCC---CHHHHHHHHHHHHHhcccCCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARP--------HLGER--RRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      |++|+.||...........+.....        .....  ...............   ....+..+.+||.+||+.||.+
T Consensus       208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  287 (342)
T cd07879         208 MLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDK  287 (342)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhh
Confidence            9999999976432111110000000        00000  000000000000000   0112467889999999999999


Q ss_pred             CCCHHHHHHH
Q 010432          426 RPLMSEVVEA  435 (511)
Q Consensus       426 RPs~~eil~~  435 (511)
                      ||++.+++.+
T Consensus       288 R~~~~e~l~h  297 (342)
T cd07879         288 RLTATEALEH  297 (342)
T ss_pred             CcCHHHHhcC
Confidence            9999999975

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-37  Score=305.29  Aligned_cols=264  Identities=27%  Similarity=0.386  Sum_probs=200.3

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      |+..+.||+|+||.||+|+...         +++.||+|++....  ......+.+|+.++++++|+||+++++++...+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   71 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKK---------TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER   71 (282)
T ss_pred             CeeehcccccCcceEEEeeecC---------CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC
Confidence            5667889999999999998865         57799999998653  222356788999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..++||||+. ++|.+++......+++..++.++.|++.||.|||+++   |+||||+|+||+++               
T Consensus        72 ~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~---------------  132 (282)
T cd07829          72 KLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILIN---------------  132 (282)
T ss_pred             ceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEc---------------
Confidence            9999999996 5999999765457999999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                +++.+||+|||+++........  .....++..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus       133 ----------~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  200 (282)
T cd07829         133 ----------RDGVLKLADFGLARAFGIPLRT--YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFP  200 (282)
T ss_pred             ----------CCCCEEEecCCcccccCCCccc--cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCC
Confidence                      4778999999999876543221  2224567889999998766 88999999999999999999999997


Q ss_pred             CCCCCCchhH-HHhhh-------hhhccccccccccCCccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNL-VEWAR-------PHLGERRRFYRLIDPRLEG----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .......... .....       ........ ....-+....    ......+..+.+++.+||+.||.+||++.+++.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         201 GDSEIDQLFKIFQILGTPTEESWPGVTKLPD-YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             CccHHHHHHHHHHHhCCCcHHHHHhhccccc-ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            6432211100 00000       00000000 0000000000    0001125679999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1.8e-37  Score=338.74  Aligned_cols=146  Identities=22%  Similarity=0.259  Sum_probs=127.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|.++++||+|+||.||+|++..         +++.||||+++......   ...+.+|+.++..++|+||+++++++.
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~---------~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~   74 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKN---------NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ   74 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECC---------CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE
Confidence            578999999999999999999875         57799999997643322   256788999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+.+||||||+.+++|.+++... ..+++..++.|+.||+.||+|||.++   ||||||||+||||+..+...+.+||+
T Consensus        75 ~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGl  150 (669)
T cd05610          75 SANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGL  150 (669)
T ss_pred             ECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCC
Confidence            999999999999999999998653 46888999999999999999999988   99999999999999777677777776


Q ss_pred             ee
Q 010432          286 CI  287 (511)
Q Consensus       286 ~~  287 (511)
                      ..
T Consensus       151 s~  152 (669)
T cd05610         151 SK  152 (669)
T ss_pred             Cc
Confidence            54

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-37  Score=314.86  Aligned_cols=269  Identities=24%  Similarity=0.343  Sum_probs=199.3

Q ss_pred             HHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcce
Q 010432          122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       122 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      .++....++|.+.+.||+|+||.||+|.+..         ++..||||++.....  ...+.+.+|+.++++++|+||++
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~   80 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---------TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG   80 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcC---------CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccc
Confidence            3445567899999999999999999998765         677999999975422  22356788999999999999999


Q ss_pred             EeeEEEeC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          200 LIGYCIED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       200 l~~~~~~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      +++++...      ...+++++++ +++|.+++..  ..+++..+..++.||+.||+|||+++   |+||||||+||+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~  154 (345)
T cd07877          81 LLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVN  154 (345)
T ss_pred             eeeeeeecccccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEc
Confidence            99988643      3468888887 8899888753  35899999999999999999999998   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSF  352 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSl  352 (511)
                                               +++.+||+|||+++.....     .....||..|+|||++.+ ..++.++|||||
T Consensus       155 -------------------------~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dvwsl  204 (345)
T cd07877         155 -------------------------EDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSV  204 (345)
T ss_pred             -------------------------CCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHH
Confidence                                     4778999999999865332     123468899999998866 568899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhh--------hhhccc--cccccccCCccCCCC---CHHHHHHHHHHHHHhc
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWAR--------PHLGER--RRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCL  419 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~Li~~cl  419 (511)
                      ||++|||++|+.||...........+....        ..+...  ..+...+.......+   ....+..+.+||.+||
T Consensus       205 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  284 (345)
T cd07877         205 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  284 (345)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHc
Confidence            999999999999996543221111000000        000000  000000000000000   0112567899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 010432          420 SRDPKARPLMSEVVEA  435 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~  435 (511)
                      +.||.+||++.+++.+
T Consensus       285 ~~dp~~R~t~~e~l~h  300 (345)
T cd07877         285 VLDSDKRITAAQALAH  300 (345)
T ss_pred             CCChhhcCCHHHHhcC
Confidence            9999999999999975

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=2.1e-37  Score=311.61  Aligned_cols=264  Identities=25%  Similarity=0.320  Sum_probs=198.1

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      ...+++|++.+.||.|+||.||+|.+..         ++..||||++.....  ...+.+.+|+.++++++||||+++++
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~   76 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQL---------TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSD   76 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECC---------CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEee
Confidence            3466789999999999999999998765         677999998864322  22356789999999999999999999


Q ss_pred             EEEe-CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          203 YCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       203 ~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ++.. ....++||||+ +++|..++..  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++        
T Consensus        77 ~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~--------  142 (328)
T cd07856          77 IFISPLEDIYFVTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILIN--------  142 (328)
T ss_pred             eEecCCCcEEEEeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeEC--------
Confidence            9876 56788999999 6799888753  35788888899999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ell  360 (511)
                                       +++.+||+|||++.......     ....++..|+|||++.+ ..++.++|||||||++|+|+
T Consensus       143 -----------------~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~  200 (328)
T cd07856         143 -----------------ENCDLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML  200 (328)
T ss_pred             -----------------CCCCEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH
Confidence                             46789999999998643321     22467889999998765 57899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHH-Hhh--------hhhh-ccccccccccCCccCCCCC-----HHHHHHHHHHHHHhcccCCCC
Q 010432          361 TGRRSMDKNRPNGEHNLV-EWA--------RPHL-GERRRFYRLIDPRLEGHFS-----IKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~-~~~--------~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      +|+.||............ ...        .... .....+.....  .....+     ...+..+.++|.+||+.+|++
T Consensus       201 tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  278 (328)
T cd07856         201 EGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP--KREPVPFSEKFKNADPSAIDLLEKMLVFDPQK  278 (328)
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc--ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhh
Confidence            999999754321110000 000        0000 00000000000  000011     113467899999999999999


Q ss_pred             CCCHHHHHHH
Q 010432          426 RPLMSEVVEA  435 (511)
Q Consensus       426 RPs~~eil~~  435 (511)
                      ||++.+++.+
T Consensus       279 R~t~~ell~~  288 (328)
T cd07856         279 RISAAEALAH  288 (328)
T ss_pred             CCCHHHHhcC
Confidence            9999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-38  Score=318.23  Aligned_cols=246  Identities=26%  Similarity=0.284  Sum_probs=199.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      +++.|.+...+|.|+|+.|-.+.+..         +++.+++|++....    .+..+|+.++... +|+||+++++.+.
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~---------t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~  386 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSP---------TDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYE  386 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccc---------cccchhheeccccc----cccccccchhhhhcCCCcceeecceec
Confidence            35678888889999999999998876         67899999998762    2234677666665 7999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++.+.|+|||++.|+-|.+.+.... .+. ..+..|+.+|+.|+.|||++|   ||||||||+|||++.           
T Consensus       387 ~~~~~~~v~e~l~g~ell~ri~~~~-~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~-----------  450 (612)
T KOG0603|consen  387 DGKEIYLVMELLDGGELLRRIRSKP-EFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDG-----------  450 (612)
T ss_pred             CCceeeeeehhccccHHHHHHHhcc-hhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecC-----------
Confidence            9999999999999998888775433 222 677789999999999999999   999999999999951           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   ..++++|+|||.++.....     ..+.+-|..|.|||++....|+.++||||||++||+||+|+.|
T Consensus       451 -------------~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp  512 (612)
T KOG0603|consen  451 -------------SAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTL  512 (612)
T ss_pred             -------------CCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCc
Confidence                         4778999999999987654     2223568899999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      |......  .++...             +    ..+.+....+..+++|+.+||+.||.+||++.++..+-..
T Consensus       513 ~~~~P~~--~ei~~~-------------i----~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  513 FAAHPAG--IEIHTR-------------I----QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             cccCCch--HHHHHh-------------h----cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            9765432  111111             1    1223334557889999999999999999999999876443

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.5e-37  Score=312.05  Aligned_cols=262  Identities=24%  Similarity=0.320  Sum_probs=196.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+..         ++..||||++......  ....+.+|+.+|++++|+||+++++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRR---------TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVF   83 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECC---------CCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeee
Confidence            45689999999999999999998765         5779999998653222  234578999999999999999999998


Q ss_pred             EeCC------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          205 IEDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       205 ~~~~------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ..+.      ..++||||+ +++|..++..  ..+++..++.++.||+.||+|||+++   |+||||||+|||++     
T Consensus        84 ~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~-----  152 (343)
T cd07880          84 TPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVN-----  152 (343)
T ss_pred             cCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEc-----
Confidence            7643      458999999 7899888753  46899999999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~  357 (511)
                                          +++.+||+|||++.......     ....+++.|+|||++.+ ..++.++|||||||++|
T Consensus       153 --------------------~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~  207 (343)
T cd07880         153 --------------------EDCELKILDFGLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMA  207 (343)
T ss_pred             --------------------CCCCEEEeecccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence                                47789999999998654321     22467899999998875 45889999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhccc------------cccccccCCccCC---CCCHHHHHHHHHHHHHhcccC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGER------------RRFYRLIDPRLEG---HFSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~---~~~~~~~~~~~~Li~~cl~~d  422 (511)
                      +|++|..||.......  .............            ..+...+......   ......+..+.++|.+||+.|
T Consensus       208 ~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  285 (343)
T cd07880         208 EMLTGKPLFKGHDHLD--QLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLD  285 (343)
T ss_pred             HHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCC
Confidence            9999999997543211  1110000000000            0000000000000   011123456889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|||+.+++.+
T Consensus       286 P~~R~t~~~~l~~  298 (343)
T cd07880         286 AESRITAAEALAH  298 (343)
T ss_pred             hhhCCCHHHHhcC
Confidence            9999999999863

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-38  Score=323.90  Aligned_cols=258  Identities=26%  Similarity=0.380  Sum_probs=211.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ..+..++||+|+||+||+|.+.-.++.     -..+||||++..... +...+++.|+-+|.+|+|||+++|+++|....
T Consensus       697 elkk~kvLGsgAfGtV~kGiw~Pege~-----vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~  771 (1177)
T KOG1025|consen  697 ELKKDKVLGSGAFGTVYKGIWIPEGEN-----VKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST  771 (1177)
T ss_pred             hhhhhceeccccceeEEeeeEecCCce-----ecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch
Confidence            345567899999999999988654332     345899999976543 34578999999999999999999999998776


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                       +.||++|++.|+|.+|++.....+-....+.|..|||+||.|||.+.   ++||||..+|||+..              
T Consensus       772 -~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVks--------------  833 (1177)
T KOG1025|consen  772 -LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKS--------------  833 (1177)
T ss_pred             -HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecC--------------
Confidence             78999999999999999887778889999999999999999999988   999999999999984              


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                 -..+||.|||+++.+.............-.+.|||-|.+....|+.++|||||||++||++| |..|+.
T Consensus       834 -----------P~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~  902 (1177)
T KOG1025|consen  834 -----------PNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYD  902 (1177)
T ss_pred             -----------CCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccC
Confidence                       56799999999998876554433333445678999999999999999999999999999998 889988


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      +.......++.+                 ...+...+..++.++..+|.+||..|+..||+|+++...+.+
T Consensus       903 gi~~~eI~dlle-----------------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  903 GIPAEEIPDLLE-----------------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             CCCHHHhhHHHh-----------------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence            765433322221                 111223344567889999999999999999999999876643

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-37  Score=292.54  Aligned_cols=253  Identities=25%  Similarity=0.372  Sum_probs=201.6

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHH---HHHHHHHHHhCC-CCCCcceE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDL-VHLNLVKL  200 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~---~~~~E~~il~~l-~H~nIv~l  200 (511)
                      ....++|.++++||+|+|++|.+++++.         |.+.||+|++++.-....+   -+..|-.+..+. +||.+|-|
T Consensus       246 ~l~l~df~ll~vigrgsyakvl~~~~~~---------t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvgl  316 (593)
T KOG0695|consen  246 GLGLQDFDLLRVIGRGSYAKVLLVRLKK---------TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGL  316 (593)
T ss_pred             ccccccceeeeeecCcchhhhhheehcc---------cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEeh
Confidence            3456899999999999999999999876         7889999999876443322   345677777666 79999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.+|+.+..+++|.||++||+|.-++.+ ...++++.+..+...|..||.|||+.|   ||+||||.+|+||+.      
T Consensus       317 hscfqtesrlffvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvllda------  386 (593)
T KOG0695|consen  317 HSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDA------  386 (593)
T ss_pred             hhhhcccceEEEEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEcc------
Confidence            9999999999999999999999877754 457999999999999999999999999   999999999999995      


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                         .+++||+|+|+++.......  ...+++||+.|+|||++.+..|+..+|+|+|||+++||+
T Consensus       387 -------------------eghikltdygmcke~l~~gd--~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemm  445 (593)
T KOG0695|consen  387 -------------------EGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM  445 (593)
T ss_pred             -------------------CCceeecccchhhcCCCCCc--ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHH
Confidence                               88999999999987544332  245689999999999999999999999999999999999


Q ss_pred             hCCCCCCCCC-CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          361 TGRRSMDKNR-PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       361 tg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      .|+.||+... .+...+...+....+-         ...+  .++...+-.+..+++..|.+||.+|..
T Consensus       446 agrspfdivgm~n~d~ntedylfqvil---------ekqi--riprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  446 AGRSPFDIVGMDNPDMNTEDYLFQVIL---------EKQI--RIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             cCCCCcceecCCCcccchhHHHHHHHh---------hhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence            9999997432 1112222222221111         1111  112223456678999999999999963

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-39  Score=293.07  Aligned_cols=254  Identities=27%  Similarity=0.345  Sum_probs=195.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      .+.+.+..||.|+||+|++-.++.         +|+..|||+++.... ....+++.|.++..+- +.||||++||.+..
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~---------sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~  134 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKP---------SGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS  134 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCc---------cCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc
Confidence            344556679999999999988766         788999999987655 4456788898875554 79999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHh----hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 DDQRLLVYEFMPRGSLENHLF----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~----~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++..||.||+| .-+|..+..    .....+++...-.|....+.||.||-..-  .|||||+||+||||+.        
T Consensus       135 EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr--------  203 (361)
T KOG1006|consen  135 EGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDR--------  203 (361)
T ss_pred             CCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEec--------
Confidence            98999999999 457765542    13457889988899999999999998643  3999999999999994        


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc--cCCCCccccchhHHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DIwSlGvil~ell  360 (511)
                                       .+.+||||||++-.+.+.-   ..+.-.|...|||||.+.  ...|+.++||||||++|||+.
T Consensus       204 -----------------~G~vKLCDFGIcGqLv~Si---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvA  263 (361)
T KOG1006|consen  204 -----------------HGDVKLCDFGICGQLVDSI---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVA  263 (361)
T ss_pred             -----------------CCCEeeecccchHhHHHHH---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeee
Confidence                             7789999999998765432   244567999999999986  346999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCC-CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG-HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ||+.|+..-..     ..+.+.......       .|.+.. .-..+.+..+..+|..||.+|-.+||...+++.
T Consensus       264 tG~fPyr~w~s-----vfeql~~Vv~gd-------pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  264 TGNFPYRKWDS-----VFEQLCQVVIGD-------PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             cCCCCcchHHH-----HHHHHHHHHcCC-------CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            99999975321     222222111110       011111 111335678999999999999999999998875

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-37  Score=313.69  Aligned_cols=264  Identities=24%  Similarity=0.329  Sum_probs=197.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++..         ++..||||++.....  .....+.+|+.++++++|+||+++++++
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTK---------TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVF   83 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECC---------CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHh
Confidence            35689999999999999999999875         577999999875422  2234577899999999999999999988


Q ss_pred             EeCCe------EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          205 IEDDQ------RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       205 ~~~~~------~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ...+.      .++|+||+ +++|.+++..  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++     
T Consensus        84 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~-----  152 (343)
T cd07851          84 TPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVN-----  152 (343)
T ss_pred             hccccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEC-----
Confidence            76554      89999999 7799998854  46899999999999999999999988   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~  357 (511)
                                          +++.+||+|||++......     .....+|..|+|||++.+ ..++.++|||||||++|
T Consensus       153 --------------------~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~  207 (343)
T cd07851         153 --------------------EDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  207 (343)
T ss_pred             --------------------CCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHH
Confidence                                4778999999999876432     223467899999998865 46789999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhc----cc------cccccccCCccCCCC---CHHHHHHHHHHHHHhcccCCC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLG----ER------RRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~---~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      ||++|+.||...........+........    ..      ..+...+.......+   ....+..+.+||.+||+.||.
T Consensus       208 elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~  287 (343)
T cd07851         208 ELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPD  287 (343)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChh
Confidence            99999999975432211100000000000    00      000000000000000   011257789999999999999


Q ss_pred             CCCCHHHHHHH
Q 010432          425 ARPLMSEVVEA  435 (511)
Q Consensus       425 ~RPs~~eil~~  435 (511)
                      +|||+.+|+++
T Consensus       288 ~Rpt~~ell~h  298 (343)
T cd07851         288 KRITAAEALAH  298 (343)
T ss_pred             hCCCHHHHhcC
Confidence            99999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-37  Score=318.75  Aligned_cols=259  Identities=27%  Similarity=0.385  Sum_probs=212.4

Q ss_pred             hHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcce
Q 010432          121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVK  199 (511)
Q Consensus       121 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~  199 (511)
                      ++.+...+..|++.+.||.|.+|.||+++.+.         +++.+|||++...... .++...|.+||+.+ +|||++.
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~---------~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~   80 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVK---------TGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVAT   80 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeee---------cCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcce
Confidence            33344456789999999999999999999876         6778999998766433 35677899999888 7999999


Q ss_pred             EeeEEEe-----CCeEEEEEEccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          200 LIGYCIE-----DDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       200 l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      +||+|..     ++.+|||||||.+|+.-+++.. .+..+.|..+..|++.++.||.+||.+.   +||||||-.|||++
T Consensus        81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT  157 (953)
T KOG0587|consen   81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLT  157 (953)
T ss_pred             EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEe
Confidence            9999874     5789999999999999998863 2567899999999999999999999988   99999999999999


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----CCCCcccc
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSD  348 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~D  348 (511)
                                               .++.|||+|||++..+.....  ...+.+||+.|||||++..     ..|+..+|
T Consensus       158 -------------------------~e~~VKLvDFGvSaQldsT~g--rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D  210 (953)
T KOG0587|consen  158 -------------------------ENAEVKLVDFGVSAQLDSTVG--RRNTFIGTPYWMAPEVIACDESPDATYDYRSD  210 (953)
T ss_pred             -------------------------ccCcEEEeeeeeeeeeecccc--cccCcCCCcccccceeeecccCCCCCcccccc
Confidence                                     488899999999987755332  2445789999999999963     35788999


Q ss_pred             chhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccccccccc-CCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI-DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       349 IwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      +||||++..||.-|.+|+.+..+.-                .++.+. +|.....-+..+++++.++|..||..|-.+||
T Consensus       211 ~WsLGITaIEladG~PPl~DmHPmr----------------aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP  274 (953)
T KOG0587|consen  211 LWSLGITAIEMAEGAPPLCDMHPMR----------------ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRP  274 (953)
T ss_pred             hhhccceeehhcCCCCCccCcchhh----------------hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCc
Confidence            9999999999999999997654321                111111 22223334667889999999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+++++
T Consensus       275 ~~~~ll~h  282 (953)
T KOG0587|consen  275 STEELLKH  282 (953)
T ss_pred             chhhhccC
Confidence            99999874

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.3e-36  Score=291.45  Aligned_cols=220  Identities=24%  Similarity=0.255  Sum_probs=177.7

Q ss_pred             CCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEEccCC
Q 010432          140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR  219 (511)
Q Consensus       140 G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~  219 (511)
                      |.||.||++++..         +++.||+|.+....     .+.+|...+....||||+++++++...+..++||||+++
T Consensus         4 g~~~~v~~~~~~~---------~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   69 (237)
T cd05576           4 GVIDKVLLVMDTR---------TQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEG   69 (237)
T ss_pred             cccceEEEEEEcc---------CCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCC
Confidence            8899999999876         67899999997653     234555666667899999999999999999999999999


Q ss_pred             CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccc
Q 010432          220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ  299 (511)
Q Consensus       220 g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (511)
                      |+|.+++... ..+++..+..++.|++.||.|||+.+   |+||||||+|||++                         .
T Consensus        70 ~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~-------------------------~  120 (237)
T cd05576          70 GKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLD-------------------------D  120 (237)
T ss_pred             CCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEc-------------------------C
Confidence            9999998654 36899999999999999999999988   99999999999998                         4


Q ss_pred             cCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHH
Q 010432          300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVE  379 (511)
Q Consensus       300 ~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~  379 (511)
                      ++.++|+|||++......     .....++..|+|||++.+..++.++||||+||++|||++|..||......       
T Consensus       121 ~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-------  188 (237)
T cd05576         121 RGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-------  188 (237)
T ss_pred             CCCEEEecccchhccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-------
Confidence            677999999988765432     12245677899999998888999999999999999999999887532110       


Q ss_pred             hhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                           ...      ..    ...++...+..+.+||.+||+.||++||++
T Consensus       189 -----~~~------~~----~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         189 -----INT------HT----TLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             -----ccc------cc----ccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence                 000      00    001112235678999999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-38  Score=311.87  Aligned_cols=252  Identities=24%  Similarity=0.310  Sum_probs=210.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..+++.+..||-||||.|=++.....         ...+|+|++++...   ...+.+..|-+||..++.|.||+||-.|
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~---------~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf  489 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQ---------KATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF  489 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEeccc---------chHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh
Confidence            45677778899999999999887642         22589999987643   2345678899999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+..++|++||-|-||.|...|..+ +.++...+..++..+++|++|||+++   ||+|||||+|+||+           
T Consensus       490 rd~kyvYmLmEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd-----------  554 (732)
T KOG0614|consen  490 RDSKYVYMLMEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLD-----------  554 (732)
T ss_pred             ccchhhhhhHHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeec-----------
Confidence            9999999999999999999999655 47889999999999999999999999   99999999999999           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||.|||+|+....+..+   .++|||+.|.|||++.+...+.++|.||||+++|||++|.+
T Consensus       555 --------------~~Gy~KLVDFGFAKki~~g~KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p  617 (732)
T KOG0614|consen  555 --------------NRGYLKLVDFGFAKKIGSGRKT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP  617 (732)
T ss_pred             --------------cCCceEEeehhhHHHhccCCce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC
Confidence                          4888999999999998877654   45899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~L  436 (511)
                      ||.+.++....+++-....                .-.++......+.+||++++..+|.+|..     +.+|-.|-
T Consensus       618 PFs~~dpmktYn~ILkGid----------------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~  678 (732)
T KOG0614|consen  618 PFSGVDPMKTYNLILKGID----------------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR  678 (732)
T ss_pred             CCCCCchHHHHHHHHhhhh----------------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence            9998776554443321111                11233444677899999999999999975     55565544

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-36  Score=292.10  Aligned_cols=240  Identities=31%  Similarity=0.393  Sum_probs=194.2

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv  213 (511)
                      ||.|+||.||++.+..         ++..||+|++......   ....+..|+.++++++|+||+++++.+..++..++|
T Consensus         1 lg~G~~~~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   71 (250)
T cd05123           1 LGKGSFGKVLLVRKKD---------TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLV   71 (250)
T ss_pred             CCCCCceEEEEEEECC---------CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEE
Confidence            6999999999998865         5779999999765432   234688999999999999999999999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF  293 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~  293 (511)
                      |||+++++|.+++... ..+++..+..++.|++.||.|||+.+   ++|+||+|+||+++                    
T Consensus        72 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~--------------------  127 (250)
T cd05123          72 LEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLD--------------------  127 (250)
T ss_pred             EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEc--------------------
Confidence            9999999999999654 36899999999999999999999988   99999999999998                    


Q ss_pred             cccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCC
Q 010432          294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG  373 (511)
Q Consensus       294 ~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~  373 (511)
                           .++.++|+|||++........  ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||.....  
T Consensus       128 -----~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--  198 (250)
T cd05123         128 -----ADGHIKLTDFGLAKELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--  198 (250)
T ss_pred             -----CCCcEEEeecCcceecccCCC--cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--
Confidence                 467899999999987654321  12335688999999999888889999999999999999999999965432  


Q ss_pred             chhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH---HHHHH
Q 010432          374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM---SEVVE  434 (511)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~---~eil~  434 (511)
                       ........   ..            ...++...+..+.+++.+||..||++||++   .++++
T Consensus       199 -~~~~~~~~---~~------------~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         199 -KEIYEKIL---KD------------PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             -HHHHHHHh---cC------------CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence             11111110   00            111222225778999999999999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-37  Score=311.39  Aligned_cols=246  Identities=25%  Similarity=0.315  Sum_probs=193.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH---HHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~---~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .-|..++.||-|+||.|.+++-.+         |...||.|.|.+.+...+   ..+..|.+||...+.+.||+||..|.
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvD---------T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ  699 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVD---------TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ  699 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecc---------hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec
Confidence            458888999999999999997655         677999999987654322   34678999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+.+|+||+|++|||+..+|.+.+ -|++..++.++.++..|+++.|..|   +|||||||+|||||            
T Consensus       700 DkdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILID------------  763 (1034)
T KOG0608|consen  700 DKDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILID------------  763 (1034)
T ss_pred             cCCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEc------------
Confidence            9999999999999999999997664 6899999999999999999999999   99999999999999            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCC---------CCCc-------------------------------ceeeee
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGP---------EGDK-------------------------------THVSTR  325 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~---------~~~~-------------------------------~~~~~~  325 (511)
                                   .+++|||+||||+.-+.         .++.                               ......
T Consensus       764 -------------rdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahs  830 (1034)
T KOG0608|consen  764 -------------RDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHS  830 (1034)
T ss_pred             -------------cCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhh
Confidence                         48889999999986321         0000                               000113


Q ss_pred             ccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCH
Q 010432          326 VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI  405 (511)
Q Consensus       326 ~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (511)
                      .+||+.|+|||++....|+..+|+||.|||||||+.|+.||....+.+....+.          .+...++-...    .
T Consensus       831 lvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~----------nw~~~l~~~~~----~  896 (1034)
T KOG0608|consen  831 LVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVI----------NWRNFLHIPYQ----G  896 (1034)
T ss_pred             hcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeee----------ehhhccccccc----c
Confidence            679999999999999999999999999999999999999998776654322111          11111221122    2


Q ss_pred             HHHHHHHHHHHHhcccCCCCCC
Q 010432          406 KGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       406 ~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      +.+.++.+||.+++ -+++.|.
T Consensus       897 ~ls~e~~~li~kLc-~sad~RL  917 (1034)
T KOG0608|consen  897 NLSKEALDLIQKLC-CSADSRL  917 (1034)
T ss_pred             ccCHHHHHHHHHHh-cChhhhh
Confidence            33566777777755 3677776

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-35  Score=286.22  Aligned_cols=292  Identities=20%  Similarity=0.247  Sum_probs=207.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-----C---CCcce
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-----H---LNLVK  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----H---~nIv~  199 (511)
                      ..+|.+.++||.|.|++||+|++..         ..+.||+|+.+... ...+..+.|+++|++++     |   .+||+
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq---------~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQ---------NKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             CceEEEEEeccccccceeEEEeecc---------CCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            3789999999999999999999987         56699999997542 22355788999999883     3   36999


Q ss_pred             EeeEEEe----CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          200 LIGYCIE----DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       200 l~~~~~~----~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                      |++.|..    +.++|||+|++ |-+|..+|... ...++...+..|++||+.||.|||...  +|||-||||+|||+..
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS  223 (590)
T ss_pred             eeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence            9999975    56899999999 77999988754 457999999999999999999999864  4999999999999973


Q ss_pred             ccccc---------------------cCC---------------------------------------------------
Q 010432          275 VRAEN---------------------YGK---------------------------------------------------  282 (511)
Q Consensus       275 ~~~~~---------------------~~~---------------------------------------------------  282 (511)
                      .....                     ...                                                   
T Consensus       224 ~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~  303 (590)
T KOG1290|consen  224 TEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESY  303 (590)
T ss_pred             cccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccccccc
Confidence            20000                     000                                                   


Q ss_pred             ------ccee-eeccc----------------cc-----------------------------c----------c-----
Q 010432          283 ------FGFC-IYYGL----------------FF-----------------------------N----------N-----  295 (511)
Q Consensus       283 ------~~~~-~~~~~----------------~~-----------------------------~----------~-----  295 (511)
                            .+.+ ....+                ..                             +          .     
T Consensus       304 n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~  383 (590)
T KOG1290|consen  304 NNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPD  383 (590)
T ss_pred             ccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCC
Confidence                  0000 00000                00                             0          0     


Q ss_pred             --cccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCC
Q 010432          296 --MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG  373 (511)
Q Consensus       296 --~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~  373 (511)
                        .-..+.++||+|||-|+.....     .+.-..|..|+|||++.+..|++.+||||++|++|||+||...|.......
T Consensus       384 ~~~~~~di~vKIaDlGNACW~~kh-----FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~  458 (590)
T KOG1290|consen  384 IPLPECDIRVKIADLGNACWVHKH-----FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGEN  458 (590)
T ss_pred             CCCCccceeEEEeeccchhhhhhh-----hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCC
Confidence              0112456899999999975432     334567899999999999999999999999999999999999997644332


Q ss_pred             c----hhHHHhh--h---------------hhhccccccccccCCcc---------CCCCCHHHHHHHHHHHHHhcccCC
Q 010432          374 E----HNLVEWA--R---------------PHLGERRRFYRLIDPRL---------EGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       374 ~----~~~~~~~--~---------------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      .    ..+..+.  .               ..+.....+..+-.-..         .-.++.+...++.+++.-||+.+|
T Consensus       459 Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~P  538 (590)
T KOG1290|consen  459 YSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDP  538 (590)
T ss_pred             CCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCc
Confidence            1    1111110  0               01111111111111000         113566778899999999999999


Q ss_pred             CCCCCHHHHHHHhc
Q 010432          424 KARPLMSEVVEALK  437 (511)
Q Consensus       424 ~~RPs~~eil~~L~  437 (511)
                      ++||||.+++++-.
T Consensus       539 eKR~tA~~cl~hPw  552 (590)
T KOG1290|consen  539 EKRPTAAQCLKHPW  552 (590)
T ss_pred             cccccHHHHhcCcc
Confidence            99999999998643

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=1.5e-35  Score=316.13  Aligned_cols=268  Identities=21%  Similarity=0.266  Sum_probs=172.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeE---
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGY---  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~---  203 (511)
                      ..++|++.++||+|+||.||+|++..+..     ..+..||||++.....  .+.+..|  .+....+.+++.++..   
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~-----~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~  200 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQS-----KKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLE  200 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCcc-----ccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhc
Confidence            45789999999999999999999876211     1267999999864321  1222222  1222223333332222   


Q ss_pred             ---EEeCCeEEEEEEccCCCCHHHHHhhCCCCC-------------------CHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 010432          204 ---CIEDDQRLLVYEFMPRGSLENHLFRRSLPL-------------------PWSIRMKIALGAAKGLAFLHEEAERPVI  261 (511)
Q Consensus       204 ---~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l-------------------~~~~~~~i~~qi~~gL~yLH~~~~~~ii  261 (511)
                         ...+...+|||||+.+++|.+++.......                   ....+..++.||+.||+|||+++   ||
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---Ii  277 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IV  277 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence               234667899999999999999986543211                   12345679999999999999988   99


Q ss_pred             ecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC
Q 010432          262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG  341 (511)
Q Consensus       262 HrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~  341 (511)
                      ||||||+|||++.                        +++.+||+|||+|+........ ......||+.|||||++...
T Consensus       278 HRDLKP~NILl~~------------------------~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~  332 (566)
T PLN03225        278 HRDVKPQNIIFSE------------------------GSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMS  332 (566)
T ss_pred             eCcCCHHHEEEeC------------------------CCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhcc
Confidence            9999999999984                        3567999999999865443222 23346789999999966422


Q ss_pred             ----------------------CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCcc
Q 010432          342 ----------------------HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL  399 (511)
Q Consensus       342 ----------------------~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (511)
                                            .++.++||||||||||||+++..++...    ...+.......-.....+...+.+..
T Consensus       333 ~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~  408 (566)
T PLN03225        333 TQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN----LIQFNRQLKRNDYDLVAWRKLVEPRA  408 (566)
T ss_pred             CCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH----HHHHHHHHHhcCCcHHHHHHhhcccc
Confidence                                  2445679999999999999977665421    00110000000000000011111110


Q ss_pred             CCC----C--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          400 EGH----F--SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       400 ~~~----~--~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ...    +  .........+||.+||+.||.+|||+.+++++
T Consensus       409 ~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        409 SPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             chhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence            000    0  00012345689999999999999999999986

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.8e-34  Score=299.34  Aligned_cols=277  Identities=19%  Similarity=0.259  Sum_probs=186.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCC-------ccCCCCcEEEEEEecCCCcccHHH--------------HHHH
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAP-------VKPGTGLTVAVKTLNHDGLQGHKE--------------WLAE  185 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~-------~~~~~~~~vAvK~~~~~~~~~~~~--------------~~~E  185 (511)
                      ..++|++.++||+|+||.||+|.+...+...       .....++.||||+++.......++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4678999999999999999999764322111       122356789999997654322222              3447


Q ss_pred             HHHHhCCCCCCc-----ceEeeEEEe--------CCeEEEEEEccCCCCHHHHHhhCC----------------------
Q 010432          186 VNFLGDLVHLNL-----VKLIGYCIE--------DDQRLLVYEFMPRGSLENHLFRRS----------------------  230 (511)
Q Consensus       186 ~~il~~l~H~nI-----v~l~~~~~~--------~~~~~lv~E~~~~g~L~~~l~~~~----------------------  230 (511)
                      +.++.+++|.++     ++++++|..        .+..+|||||+++|+|.+++....                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777766654     677777753        356899999999999999886421                      


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCC
Q 010432          231 -LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG  309 (511)
Q Consensus       231 -~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG  309 (511)
                       ..+++..++.++.|++.||.|||+.+   |+||||||+|||++                         .+..+||+|||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~-------------------------~~~~~kL~DFG  354 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVT-------------------------VDGQVKIIDFG  354 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEEC-------------------------CCCcEEEEeCc
Confidence             12456778899999999999999988   99999999999998                         36789999999


Q ss_pred             CcccCCCCCcceeeeeccccccccCCcccccCC--------------------CC--ccccchhHHHHHHHHHhCCC-CC
Q 010432          310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--------------------LT--SRSDVYSFGVVLLEMLTGRR-SM  366 (511)
Q Consensus       310 la~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--------------------~~--~~~DIwSlGvil~elltg~~-pf  366 (511)
                      +++......... .....+|+.|+|||++....                    |+  .+.||||+|||||+|++|.. ||
T Consensus       355 la~~~~~~~~~~-~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~  433 (507)
T PLN03224        355 AAVDMCTGINFN-PLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPV  433 (507)
T ss_pred             CccccccCCccC-ccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCc
Confidence            997654322211 11234588999999875322                    12  24799999999999999875 66


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHHhc
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP---KARPLMSEVVEALK  437 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP---~~RPs~~eil~~L~  437 (511)
                      ........ .+.. ......   .+.......+.-......+...++|+.+||..+|   .+|+|+.|+|+|-.
T Consensus       434 ~~~~~f~~-~~~~-~~~~~~---~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~  502 (507)
T PLN03224        434 ANIRLFNT-ELRQ-YDNDLN---RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF  502 (507)
T ss_pred             cchhhhhh-HHhh-ccchHH---HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence            43211110 0000 000000   0000000001111112335788999999999876   68999999998654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-35  Score=281.30  Aligned_cols=269  Identities=26%  Similarity=0.352  Sum_probs=217.6

Q ss_pred             hHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcce
Q 010432          121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       121 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      ..++.+...++++..++-+|.||.||.|.+++.+..    ...+.|-+|.++....+ ....++.|.-.|..+.|||+..
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~----n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~  351 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTY----NDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLS  351 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCc----chHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccc
Confidence            355666777899999999999999999988764332    23456788888765433 3356889999999999999999


Q ss_pred             EeeEEEeC-CeEEEEEEccCCCCHHHHHhh-----C--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          200 LIGYCIED-DQRLLVYEFMPRGSLENHLFR-----R--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       200 l~~~~~~~-~~~~lv~E~~~~g~L~~~l~~-----~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      +.+++.++ +..++++.++..|+|..||..     .  ...+...+...++.|++.||+|||.++   |||.||..+|++
T Consensus       352 V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCv  428 (563)
T KOG1024|consen  352 VLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCV  428 (563)
T ss_pred             eeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcce
Confidence            99998764 567888999999999999972     1  234666778889999999999999999   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      |+                         +..++||+|=.+++.+-..+..........+..||+||.+....|+.++||||
T Consensus       429 Id-------------------------d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWs  483 (563)
T KOG1024|consen  429 ID-------------------------DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWS  483 (563)
T ss_pred             eh-------------------------hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHH
Confidence            99                         57889999999999887766655444455678999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          352 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       352 lGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |||+||||+| |+.|+...++..+...                 +....+-..+.++++++..+|.-||..+|++||+++
T Consensus       484 fGVllWELmtlg~~PyaeIDPfEm~~y-----------------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~  546 (563)
T KOG1024|consen  484 FGVLLWELMTLGKLPYAEIDPFEMEHY-----------------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFS  546 (563)
T ss_pred             HHHHHHHHHhcCCCCccccCHHHHHHH-----------------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHH
Confidence            9999999998 8889876655433221                 112223334456789999999999999999999999


Q ss_pred             HHHHHhcC
Q 010432          431 EVVEALKP  438 (511)
Q Consensus       431 eil~~L~~  438 (511)
                      +++..|.+
T Consensus       547 Qlv~cLse  554 (563)
T KOG1024|consen  547 QLVICLSE  554 (563)
T ss_pred             HHHHHHHH
Confidence            99998854

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=8.3e-34  Score=270.94  Aligned_cols=239  Identities=31%  Similarity=0.425  Sum_probs=192.5

Q ss_pred             CCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEEccCC
Q 010432          141 GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR  219 (511)
Q Consensus       141 ~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~  219 (511)
                      +||.||+|.+..         +++.||+|++....... .+.+.+|+..+++++|+||+++++++......+++|||+.+
T Consensus         1 ~~g~v~~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   71 (244)
T smart00220        1 SFGKVYLARDKK---------TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDG   71 (244)
T ss_pred             CceEEEEEEECC---------CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCC
Confidence            589999999865         57799999998765544 57889999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccc
Q 010432          220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ  299 (511)
Q Consensus       220 g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (511)
                      ++|.+++.... .+++..+..++.+++.+|.|||..+   |+|+||+|+||+++                         +
T Consensus        72 ~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~-------------------------~  122 (244)
T smart00220       72 GDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLD-------------------------E  122 (244)
T ss_pred             CCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEEC-------------------------C
Confidence            99999986543 3889999999999999999999988   99999999999998                         3


Q ss_pred             cCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHH
Q 010432          300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVE  379 (511)
Q Consensus       300 ~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~  379 (511)
                      ++.++|+|||.+.......   ......|+..|++||.+.+..++.++||||||+++|+|++|..||.....  ......
T Consensus       123 ~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~  197 (244)
T smart00220      123 DGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFK  197 (244)
T ss_pred             CCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHH
Confidence            6789999999998765532   12335688999999999888899999999999999999999999965311  111111


Q ss_pred             hhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      .......   .   .      .......+..+.+++.+||..+|++||++.++++
T Consensus       198 ~~~~~~~---~---~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      198 KIGKPKP---P---F------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHhccCC---C---C------ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            1110000   0   0      0000003467899999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-35  Score=305.46  Aligned_cols=250  Identities=27%  Similarity=0.362  Sum_probs=189.0

Q ss_pred             CCCCccccCCCc-eEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCCe
Q 010432          132 RPESLLGEGGFG-CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       132 ~~~~~lG~G~fg-~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~~  209 (511)
                      ...+++|.|+.| .||+|.+           .|+.||||++-...   ..-..+|+..|+.- +|||||++|+.-.+..+
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~y-----------e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF  577 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVY-----------EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQF  577 (903)
T ss_pred             ccHHHcccCCCCcEEEEEee-----------CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCce
Confidence            334578999988 4899988           46799999986543   23456899999888 69999999999888999


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCC---CHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPL---PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l---~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .||.+|+| ..+|.+++......+   .....+.++.|++.||++||+.+   ||||||||.||||+.+...        
T Consensus       578 ~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~--------  645 (903)
T KOG1027|consen  578 LYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSAD--------  645 (903)
T ss_pred             EEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCC--------
Confidence            99999999 569999997631111   11345678899999999999998   9999999999999864321        


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC-CC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG-RR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg-~~  364 (511)
                                  ....++|+|||+++.+..+.... ......||-+|+|||++....-+.++||||||||+|+.++| ..
T Consensus       646 ------------~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~H  713 (903)
T KOG1027|consen  646 ------------GTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSH  713 (903)
T ss_pred             ------------cceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCcc
Confidence                        24689999999999876654332 23446799999999999988888899999999999999997 89


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||...-....        ..+.....+..+.     .  ..+  .++.+||.+|++++|..||+|.+|+.|-
T Consensus       714 pFGd~~~R~~--------NIl~~~~~L~~L~-----~--~~d--~eA~dLI~~ml~~dP~~RPsa~~VL~HP  768 (903)
T KOG1027|consen  714 PFGDSLERQA--------NILTGNYTLVHLE-----P--LPD--CEAKDLISRMLNPDPQLRPSATDVLNHP  768 (903)
T ss_pred             CCCchHHhhh--------hhhcCccceeeec-----c--Cch--HHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence            9965321110        0111111111111     0  011  1789999999999999999999999753

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=3.2e-35  Score=289.66  Aligned_cols=269  Identities=23%  Similarity=0.294  Sum_probs=207.7

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC------CCCcc
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV------HLNLV  198 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~------H~nIv  198 (511)
                      +....+|.+....|+|-|++|.+|.+..         .|..||||+|..+... .+.=+.|++||++|+      --|++
T Consensus       428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~---------r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hcl  497 (752)
T KOG0670|consen  428 ELLDSRYEVQGYTGKGVFSTVVRARDQA---------RGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCL  497 (752)
T ss_pred             hhhcceeEEEeccccceeeeeeeccccC---------CCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHH
Confidence            4556789999999999999999998876         5669999999876432 244578999999995      34789


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      +|+-.|...+++|||+|-+ .-+|.+.|..-  +..|....+..|+.|+..||..|-.++   |+|.||||+|||+..  
T Consensus       498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE--  571 (752)
T KOG0670|consen  498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNE--  571 (752)
T ss_pred             HHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEecc--
Confidence            9999999999999999998 56999999753  456888899999999999999999988   999999999999985  


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil  356 (511)
                                            ....+||||||.|........+    -..-+..|.|||++.|.+|+...|+||.||+|
T Consensus       572 ----------------------~k~iLKLCDfGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctL  625 (752)
T KOG0670|consen  572 ----------------------SKNILKLCDFGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTL  625 (752)
T ss_pred             ----------------------CcceeeeccCcccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceee
Confidence                                  4567999999999887664422    23446789999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhh---------------hhcccccc----------------ccccCC------cc
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARP---------------HLGERRRF----------------YRLIDP------RL  399 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~---------------~~~~~~~~----------------~~~~~~------~~  399 (511)
                      |||.||+..|.+...+.+..+.--+..               ++.....|                ...+.|      .+
T Consensus       626 YElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l  705 (752)
T KOG0670|consen  626 YELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSEL  705 (752)
T ss_pred             EEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHH
Confidence            999999999998766544332211111               11111010                111111      00


Q ss_pred             CC--CCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          400 EG--HFS---IKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       400 ~~--~~~---~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+  .++   ......+.+|+.+||..||++|.|..+.|.+
T Consensus       706 ~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  706 IAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             hccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence            00  112   2234678899999999999999999999874

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-36  Score=273.77  Aligned_cols=267  Identities=22%  Similarity=0.334  Sum_probs=200.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC--CcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +.+..+.||.|+||+||.+.+..         .|+.||+|.+..-  .....+.+.+|+.+|..++|.|++..++...-.
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPR---------dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp  124 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPR---------SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA  124 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCC---------CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC
Confidence            45667889999999999987654         6889999998653  223446789999999999999999998876543


Q ss_pred             C-----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          208 D-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       208 ~-----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .     .+|+|+|++ ..||...|.. ...++...+.-+++||++||.|||+.+   |+||||||.|+|+++        
T Consensus       125 h~dfFqEiYV~TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNS--------  191 (449)
T KOG0664|consen  125 NPSFFQELYVLTELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNS--------  191 (449)
T ss_pred             CchHHHHHHHHHHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEecc--------
Confidence            2     457889998 5588887754 357888888999999999999999999   999999999999984        


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHh
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ellt  361 (511)
                                       +..+||||||+|+........+ .+..+-|-.|+|||++++ ..|+.++||||.|||+.||+.
T Consensus       192 -----------------NCvLKICDFGLARvee~d~~~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg  253 (449)
T KOG0664|consen  192 -----------------NCILKICDFGLARTWDQRDRLN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ  253 (449)
T ss_pred             -----------------CceEEecccccccccchhhhhh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh
Confidence                             7889999999999866544433 444567899999999986 479999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhh--c------cccccccccCCccC-CC--------CCHHHHHHHHHHHHHhcccCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHL--G------ERRRFYRLIDPRLE-GH--------FSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      ++..|....+....+++.-....-  .      +..+. .+++...+ ..        -+.....+...++..+|..||+
T Consensus       254 RrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~-H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~d  332 (449)
T KOG0664|consen  254 RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN-HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPD  332 (449)
T ss_pred             hhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH-HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCc
Confidence            999998877665544432221100  0      00000 00110000 00        0112234567899999999999


Q ss_pred             CCCCHHHHHHHhc
Q 010432          425 ARPLMSEVVEALK  437 (511)
Q Consensus       425 ~RPs~~eil~~L~  437 (511)
                      +|.+..+.+.++.
T Consensus       333 kris~~~A~~~~~  345 (449)
T KOG0664|consen  333 KRISVEEALQHRY  345 (449)
T ss_pred             ccccHhhhccccc
Confidence            9999999887764

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=256.10  Aligned_cols=203  Identities=27%  Similarity=0.363  Sum_probs=168.6

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      +..+....+..||+|+||.|-+-++..         +|...|+|.+...-. +..++.++|+++..+. .+|.+|++||.
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~---------sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa  113 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQ---------SGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGA  113 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeecc---------CCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehh
Confidence            334455556679999999999988876         688999999976532 3446788999987665 79999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .......||.||.| .-+|..+..   ..+..+++..+-+|+..++.||.|||++-+  |||||+||+||||+.      
T Consensus       114 ~~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~------  184 (282)
T KOG0984|consen  114 LFREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINY------  184 (282)
T ss_pred             hhccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEcc------
Confidence            98888999999999 457776653   457789999999999999999999998653  999999999999994      


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc----cCCCCccccchhHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM----TGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~----~~~~~~~~DIwSlGvil  356 (511)
                                         ++++||||||++-.+.+.-.   .+-..|.-.|||||.+.    ...|+-++||||||+++
T Consensus       185 -------------------~GqVKiCDFGIsG~L~dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItm  242 (282)
T KOG0984|consen  185 -------------------DGQVKICDFGISGYLVDSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITM  242 (282)
T ss_pred             -------------------CCcEEEcccccceeehhhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhh
Confidence                               88999999999987655322   23346888999999885    34799999999999999


Q ss_pred             HHHHhCCCCCCC
Q 010432          357 LEMLTGRRSMDK  368 (511)
Q Consensus       357 ~elltg~~pf~~  368 (511)
                      .||.+++.||..
T Consensus       243 iElA~lr~PY~~  254 (282)
T KOG0984|consen  243 IEMAILRFPYES  254 (282)
T ss_pred             hhhhhccccccc
Confidence            999999999974

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.9e-34  Score=257.92  Aligned_cols=261  Identities=19%  Similarity=0.262  Sum_probs=199.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~  206 (511)
                      .++|++.+++|+|-|+.||.|....         +.+.++||+++.-.   .+.+.+|+.||..|. |||||+|++...+
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~---------~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~D  104 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINIT---------NNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKD  104 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccC---------CCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence            4689999999999999999998765         56689999998643   356889999999996 9999999999877


Q ss_pred             CC--eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 DD--QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 ~~--~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..  ...||+||+.+.+...+.    ..+....+..++.+++.||.|+|+.|   |+|||+||.|++|+.          
T Consensus       105 p~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh----------  167 (338)
T KOG0668|consen  105 PESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDH----------  167 (338)
T ss_pred             ccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeech----------
Confidence            53  456999999998877665    35777888999999999999999999   999999999999996          


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~  363 (511)
                                    ....++|+|+|+|.....+....+   .+.+..|--||++.. ..|+..-|+|||||+|..|+..+
T Consensus       168 --------------~~rkLrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk  230 (338)
T KOG0668|consen  168 --------------ELRKLRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  230 (338)
T ss_pred             --------------hhceeeeeecchHhhcCCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhcc
Confidence                          466799999999998877655433   456778899998864 57899999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhh-------------hccccccccccCCccCCC--------CCHHHHHHHHHHHHHhcccC
Q 010432          364 RSMDKNRPNGEHNLVEWARPH-------------LGERRRFYRLIDPRLEGH--------FSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~Li~~cl~~d  422 (511)
                      .||.....+.. +++..+...             +.-...+..++....+..        -..-.++++.+|+.++|.+|
T Consensus       231 epFFhG~dN~D-QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYD  309 (338)
T KOG0668|consen  231 EPFFHGHDNYD-QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYD  309 (338)
T ss_pred             CcccCCCCCHH-HHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhc
Confidence            99976654432 222222110             000111111111100000        00011478899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      -.+|+|+.|.+.+
T Consensus       310 HqeRlTakEam~H  322 (338)
T KOG0668|consen  310 HQERLTAKEAMAH  322 (338)
T ss_pred             cccccchHHHhcC
Confidence            9999999999864

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-33  Score=262.23  Aligned_cols=263  Identities=23%  Similarity=0.300  Sum_probs=195.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .+|.-+..+|.|.- .|-.|.+.-         +++.||+|.+....  ....++..+|...+..+.|+||++++.+|.-
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v---------~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP   86 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQV---------LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTP   86 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhh---------ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCc
Confidence            36677778888887 666665543         67799999886542  2334567899999999999999999999864


Q ss_pred             C------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 D------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .      ...|+||||+ .++|.+.+.   ..++-.....|+.|++.|+.|||+.+   |+||||||+||++.       
T Consensus        87 ~~~l~~~~e~y~v~e~m-~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~-------  152 (369)
T KOG0665|consen   87 QKTLEEFQEVYLVMELM-DANLCQVIL---MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVN-------  152 (369)
T ss_pred             cccHHHHHhHHHHHHhh-hhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceec-------
Confidence            3      3568999999 569999886   35777888999999999999999999   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .+..+||.|||+|+.....   ...+..+.|..|.|||++.+..|...+||||+|||+.||+
T Consensus       153 ------------------~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli  211 (369)
T KOG0665|consen  153 ------------------SDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELI  211 (369)
T ss_pred             ------------------chhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHh
Confidence                              4788999999999875443   2345578899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHH----------------Hhhhhhhcccc-----ccccccCCc-cCC--CCCHHHHHHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLV----------------EWARPHLGERR-----RFYRLIDPR-LEG--HFSIKGAQKAAQLAA  416 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~----------------~~~~~~~~~~~-----~~~~~~~~~-~~~--~~~~~~~~~~~~Li~  416 (511)
                      +|...|.+....+.-..+                ..++.......     .+.+.+... +..  ..+......+.+|+.
T Consensus       212 ~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~  291 (369)
T KOG0665|consen  212 LGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLS  291 (369)
T ss_pred             hceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHH
Confidence            999999864332211111                11111110000     111111110 000  011122467889999


Q ss_pred             HhcccCCCCCCCHHHHHHHh
Q 010432          417 HCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       417 ~cl~~dP~~RPs~~eil~~L  436 (511)
                      +||..||++|.+++++|+|-
T Consensus       292 ~MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  292 KMLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             HhhccChhhcccHHHHhcCC
Confidence            99999999999999999863

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.98  E-value=4.2e-33  Score=277.95  Aligned_cols=198  Identities=24%  Similarity=0.339  Sum_probs=170.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH--------HHHHHHHHHHhCCC---CCCc
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--------KEWLAEVNFLGDLV---HLNL  197 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~--------~~~~~E~~il~~l~---H~nI  197 (511)
                      .+|..++.||+|+||.|++|.++.         ....|+||.+.+...-..        -.+-.|+.||..|+   |+||
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~---------n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NI  631 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKE---------NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENI  631 (772)
T ss_pred             ccceeeeeccccccceEEEeeecc---------cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccch
Confidence            469999999999999999999986         355899999987643210        12345999999997   9999


Q ss_pred             ceEeeEEEeCCeEEEEEEcc-CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          198 VKLIGYCIEDDQRLLVYEFM-PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       198 v~l~~~~~~~~~~~lv~E~~-~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      ++++++|.+++++||+||-. ++-+|+++|..+ ..+++..+..|+.||+.|+++||+++   |||||||-+|+.++.  
T Consensus       632 lKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~--  705 (772)
T KOG1152|consen  632 LKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDS--  705 (772)
T ss_pred             hhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhccccccccC---ceecccccccEEEec--
Confidence            99999999999999999986 445899999544 47899999999999999999999999   999999999999994  


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVV  355 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvi  355 (511)
                                             ++-+||+|||.|.....+..    ..++||..|.|||++.+.+| +..-|||++|++
T Consensus       706 -----------------------~g~~klidfgsaa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~qdiwalgil  758 (772)
T KOG1152|consen  706 -----------------------NGFVKLIDFGSAAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGIL  758 (772)
T ss_pred             -----------------------CCeEEEeeccchhhhcCCCc----ceeeeeccccchhhhCCCccCCCcchhhhhhhe
Confidence                                   77899999999988766543    34789999999999999888 667899999999


Q ss_pred             HHHHHhCCCCCCC
Q 010432          356 LLEMLTGRRSMDK  368 (511)
Q Consensus       356 l~elltg~~pf~~  368 (511)
                      ||.++....||+.
T Consensus       759 lytivykenpyyn  771 (772)
T KOG1152|consen  759 LYTIVYKENPYYN  771 (772)
T ss_pred             eeEEEeccCCCcC
Confidence            9999999999863

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.98  E-value=9.5e-34  Score=286.88  Aligned_cols=254  Identities=23%  Similarity=0.349  Sum_probs=205.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ..+|+++..+|.|+||.||||+++.         +++..|||+++........-..+|+-+++..+|+|||.|+|.+...
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~---------s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~   84 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKR---------SGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR   84 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccc---------cCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhh
Confidence            4689999999999999999999876         7889999999988766666677899999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|++||||.+|+|.+..+ -..++++.++....+..+.||+|||+.+   =+|||||-.|||++              
T Consensus        85 dklwicMEycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanillt--------------  146 (829)
T KOG0576|consen   85 DKLWICMEYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLT--------------  146 (829)
T ss_pred             cCcEEEEEecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeec--------------
Confidence            99999999999999988664 3457889999999999999999999999   89999999999999              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                 +.+.+|++|||.+-.......  ....+.||+.|||||+..   .+.|+..+|||++|+...|+-.-++
T Consensus       147 -----------d~gDvklaDfgvsaqitati~--KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqp  213 (829)
T KOG0576|consen  147 -----------DEGDVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQP  213 (829)
T ss_pred             -----------ccCceeecccCchhhhhhhhh--hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCC
Confidence                       578899999999977654322  233578999999999863   6789999999999999999998888


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      |.....+.....+.  ....+         -.+.+.  -...+++-+-+|++.||..+|++||++..+|.
T Consensus       214 plfdlhpmr~l~Lm--TkS~~---------qpp~lk--Dk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  214 PLFDLHPMRALFLM--TKSGF---------QPPTLK--DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             cccccchHHHHHHh--hccCC---------CCCccc--CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            87544332111111  00000         011111  12344677889999999999999999988765

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=1.3e-30  Score=242.63  Aligned_cols=213  Identities=36%  Similarity=0.568  Sum_probs=182.8

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYE  215 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E  215 (511)
                      ||+|++|.||++....         +++.+++|++...... ....+.+|+.+++.+.|++|+++++++......+++||
T Consensus         1 l~~g~~~~v~~~~~~~---------~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e   71 (215)
T cd00180           1 LGEGGFGTVYLARDKK---------TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVME   71 (215)
T ss_pred             CCcCCceEEEEEEecC---------CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEe
Confidence            6899999999998864         4779999999876543 23568899999999999999999999999899999999


Q ss_pred             ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccc
Q 010432          216 FMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN  295 (511)
Q Consensus       216 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~  295 (511)
                      |+.+++|.+++......+++..+..++.+++.+|.|||+.+   ++|+||+|.||+++.                     
T Consensus        72 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~---------------------  127 (215)
T cd00180          72 YCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDS---------------------  127 (215)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeC---------------------
Confidence            99989999998765356889999999999999999999998   999999999999982                     


Q ss_pred             cccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCc
Q 010432          296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE  374 (511)
Q Consensus       296 ~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~  374 (511)
                         .+..++|+|||.+........  ......+...|++||.+... .++.+.|+|+||+++++|               
T Consensus       128 ---~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------  187 (215)
T cd00180         128 ---DNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------  187 (215)
T ss_pred             ---CCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------
Confidence               157799999999987654321  12224578899999998876 888999999999999998               


Q ss_pred             hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                                                        ..+.+++.+||+.||.+||++.+++++|
T Consensus       188 ----------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ----------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ----------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                              2467899999999999999999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.9e-32  Score=248.81  Aligned_cols=252  Identities=23%  Similarity=0.330  Sum_probs=188.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEee-EEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIG-YCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~-~~~  205 (511)
                      .+.|.+.+.||+|.||.+.+|+++.         +...+++|.+.... ....+|.+|...--.| .|.||+.-|+ .|+
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~---------s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq   92 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQ---------SKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQ   92 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccC---------CceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhh
Confidence            3578899999999999999999987         56799999997653 3357899999876666 5899998876 466


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+.++++|||++.|+|..-+..  ..+-+.....++.|+++||.|+|+++   +||||||.+||||-..          
T Consensus        93 t~d~YvF~qE~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~----------  157 (378)
T KOG1345|consen   93 TSDAYVFVQEFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDA----------  157 (378)
T ss_pred             cCceEEEeeccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecC----------
Confidence            77888899999999999988754  35778888999999999999999999   9999999999999642          


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc---C--CCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---G--HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~--~~~~~~DIwSlGvil~ell  360 (511)
                                   +..+|||||||+.+..+..-..     ..-+..|.+||+...   .  ...+.+|||.||+|+|.++
T Consensus       158 -------------df~rvKlcDFG~t~k~g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cl  219 (378)
T KOG1345|consen  158 -------------DFYRVKLCDFGLTRKVGTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCL  219 (378)
T ss_pred             -------------CccEEEeeecccccccCceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeee
Confidence                         3568999999999876543221     234667999997753   2  3467899999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ||++||......+ .....|.....        -..+.++..|. .+++.+..+.++-|..+|++|--..++
T Consensus       220 tG~~PWQka~~~d-~~Y~~~~~w~~--------rk~~~~P~~F~-~fs~~a~r~Fkk~lt~~~~drcki~~~  281 (378)
T KOG1345|consen  220 TGKFPWQKASIMD-KPYWEWEQWLK--------RKNPALPKKFN-PFSEKALRLFKKSLTPRFKDRCKIWTA  281 (378)
T ss_pred             cCCCcchhhhccC-chHHHHHHHhc--------ccCccCchhhc-ccCHHHHHHHHHhcCCcccccchhHHH
Confidence            9999998443222 11222211111        11111221111 235778899999999999999433333

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.97  E-value=9.4e-32  Score=260.86  Aligned_cols=273  Identities=25%  Similarity=0.327  Sum_probs=201.2

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      .+....+.|.++++||+|.|++||++.+...      ....+.||+|.+.....  ...+..|++.|..+ -+.||+++.
T Consensus        30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~------~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~  101 (418)
T KOG1167|consen   30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQ------DTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLN  101 (418)
T ss_pred             hhhhhhhhhhhhccccccchhhhhhhhHhhh------ccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcch
Confidence            3445567899999999999999999988752      22577999999976543  35688999999999 699999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++..++..++||||++.-+..+++.    .++...+..+++.++.||.++|.+|   ||||||||.|+|.+.       
T Consensus       102 ~~~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~-------  167 (418)
T KOG1167|consen  102 GCFRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNR-------  167 (418)
T ss_pred             hhhccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCcccccccc-------
Confidence            99999999999999999988888873    4678899999999999999999999   999999999999985       


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCC-----------------C-----------------CC--------c
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP-----------------E-----------------GD--------K  319 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~-----------------~-----------------~~--------~  319 (511)
                                       ....-.|+|||+|....                 .                 ..        .
T Consensus       168 -----------------~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r  230 (418)
T KOG1167|consen  168 -----------------RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGR  230 (418)
T ss_pred             -----------------ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCc
Confidence                             45667899999997210                 0                 00        0


Q ss_pred             ceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhh----------hhhccc
Q 010432          320 THVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR----------PHLGER  388 (511)
Q Consensus       320 ~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~----------~~~~~~  388 (511)
                      ........||++|+|||++... .-++++||||.|||++-+++++.||........ .+.+.+.          ..+...
T Consensus       231 ~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~-al~ei~tifG~~~mrk~A~l~g~  309 (418)
T KOG1167|consen  231 PSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDAD-ALAEIATIFGSAEMRKCAALPGR  309 (418)
T ss_pred             cceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccc-hHHHHHHHhChHHHHHHhhcCCc
Confidence            0011135799999999999754 568899999999999999999999975433211 1111100          000000


Q ss_pred             ------cc---------cccccC--Cc-------c-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          389 ------RR---------FYRLID--PR-------L-EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       389 ------~~---------~~~~~~--~~-------~-~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                            ..         -++.++  ..       . ........+..+.+|+.+||..||.+|.|+++.|.+
T Consensus       310 ~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  310 ILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             eeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence                  00         000110  00       0 011112234578999999999999999999999974

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=1e-29  Score=240.38  Aligned_cols=200  Identities=33%  Similarity=0.418  Sum_probs=172.2

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      |.+.+.||.|++|.||++.+..         ++..||+|.+...... ....+.+|+..+.+++|+||+++++++...+.
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   71 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKG---------TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEP   71 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcC---------CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCc
Confidence            5667889999999999998865         5679999999876554 45678899999999999999999999999899


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeec
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY  289 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~  289 (511)
                      .++++||+++++|.+++......+++..+..++.+++.+|.|||.++   ++|+||+|.||+++                
T Consensus        72 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~----------------  132 (225)
T smart00221       72 LYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLG----------------  132 (225)
T ss_pred             eEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEc----------------
Confidence            99999999999999998654433889999999999999999999988   99999999999998                


Q ss_pred             cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccc-ccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-MTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       290 ~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~-~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                               .+..++|+|||++......... ......++..|++||++ ....++.++|||+||+++|||++|+.||..
T Consensus       133 ---------~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      133 ---------MDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ---------CCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                     3678999999999876553210 12235678899999998 667788899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=4.6e-31  Score=294.94  Aligned_cols=217  Identities=19%  Similarity=0.243  Sum_probs=158.0

Q ss_pred             CCCC-CCcceEeeEE-------EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 010432          191 DLVH-LNLVKLIGYC-------IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY  262 (511)
Q Consensus       191 ~l~H-~nIv~l~~~~-------~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiH  262 (511)
                      .++| .||++++++|       .....++++|||+ +++|.++|......+++..++.|+.||+.||.|||+++   |||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---IvH  103 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG---IVV  103 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC---eee
Confidence            4456 5888888887       2334567888988 67999999765667999999999999999999999998   999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc--------------ceeeeeccc
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK--------------THVSTRVMG  328 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~--------------~~~~~~~~G  328 (511)
                      |||||+||||+..+..++.+|+.+.....      ..+..+||+|||+++.......              .......+|
T Consensus       104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  177 (793)
T PLN00181        104 HNVRPSCFVMSSFNHVSFIESASCSDSGS------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME  177 (793)
T ss_pred             ccCCchhEEEcccCcEEEeeccccCcccc------cccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence            99999999998777777777776543211      1356799999999975321100              001122468


Q ss_pred             cccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHH
Q 010432          329 TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA  408 (511)
Q Consensus       329 t~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (511)
                      |+.|||||++.+..|+.++|||||||+||||++|..|+.....     .......         ....+..     ....
T Consensus       178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~~~~~~---------~~~~~~~-----~~~~  238 (793)
T PLN00181        178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TMSSLRH---------RVLPPQI-----LLNW  238 (793)
T ss_pred             CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HHHHHHH---------hhcChhh-----hhcC
Confidence            9999999999999999999999999999999999888652210     0000000         0111110     0112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          409 QKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       409 ~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..+..++.+||+.||.+||++.+|+++-
T Consensus       239 ~~~~~~~~~~L~~~P~~Rps~~eil~h~  266 (793)
T PLN00181        239 PKEASFCLWLLHPEPSCRPSMSELLQSE  266 (793)
T ss_pred             HHHHHHHHHhCCCChhhCcChHHHhhch
Confidence            4467899999999999999999998753

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=3e-27  Score=215.68  Aligned_cols=166  Identities=25%  Similarity=0.255  Sum_probs=125.4

Q ss_pred             CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccc
Q 010432          220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ  299 (511)
Q Consensus       220 g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (511)
                      |+|.+++..+...+++..++.|+.||+.||.|||+++         ||+|||++                         .
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~-------------------------~   46 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLT-------------------------W   46 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEc-------------------------C
Confidence            7899999876677999999999999999999999865         99999998                         4


Q ss_pred             cCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHH
Q 010432          300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVE  379 (511)
Q Consensus       300 ~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~  379 (511)
                      ++.+|+  ||+++......       ..||+.|||||++.+..|+.++|||||||++|||++|+.||.......  ....
T Consensus        47 ~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~  115 (176)
T smart00750       47 DGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILE  115 (176)
T ss_pred             ccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHH
Confidence            677888  99998754321       258999999999999999999999999999999999999996543211  1111


Q ss_pred             hhhhhhccccccccccCCccCCCCCHHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQ--KAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ........       ..+. ..........  .+.+++.+||+.||.+||++.++++++..
T Consensus       116 ~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      116 ILLNGMPA-------DDPR-DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHHhcc-------CCcc-ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            11100000       0000 0001112233  68999999999999999999999998754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-25  Score=225.32  Aligned_cols=265  Identities=23%  Similarity=0.228  Sum_probs=196.4

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC----CCcceEeeEE-
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH----LNLVKLIGYC-  204 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H----~nIv~l~~~~-  204 (511)
                      +|.+.++||+|+||.||+|.....+        ...+|+|............+..|+.+|..+..    .++..+++.. 
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~--------~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~   90 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK--------NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR   90 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC--------CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence            7999999999999999999886521        34789998876533322357789999988863    5889999988 


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      ..+...||||+.+ |.+|.++..... ..++..+++.|+.|++.+|++||+.|   +|||||||+|++++....      
T Consensus        91 ~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~------  160 (322)
T KOG1164|consen   91 STEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSR------  160 (322)
T ss_pred             CCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCC------
Confidence            4778899999999 889999875444 67999999999999999999999999   999999999999985210      


Q ss_pred             ceeeeccccccccccccCceeeecCCCcc--cCCCCCcc---ee---eeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAK--DGPEGDKT---HV---STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~--~~~~~~~~---~~---~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                    .+...+.|.|||+++  ........   ..   .....||..|+++.+..+...+.+.|+||++.+
T Consensus       161 --------------~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~  226 (322)
T KOG1164|consen  161 --------------SEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYM  226 (322)
T ss_pred             --------------cccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHH
Confidence                          012569999999999  32221110   00   123569999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||+.|..||...................        ....     +....+..+.+++..+-..+...+|....+...
T Consensus       227 l~el~~g~LPW~~~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  227 LLELLKGSLPWEALEMTDLKSKFEKDPRKL--------LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             HHHHhcCCCCCccccccchHHHHHHHhhhh--------cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            999999999996544322211111100000        0000     111124566677777777899999999999888


Q ss_pred             hcCC
Q 010432          436 LKPL  439 (511)
Q Consensus       436 L~~l  439 (511)
                      |...
T Consensus       294 l~~~  297 (322)
T KOG1164|consen  294 LKDV  297 (322)
T ss_pred             HHHH
Confidence            6544

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.9e-26  Score=229.77  Aligned_cols=177  Identities=18%  Similarity=0.151  Sum_probs=132.6

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-----ccHHHHHHHHHHHhCCCCCCcce-
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLAEVNFLGDLVHLNLVK-  199 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~H~nIv~-  199 (511)
                      ....+|.+.+.||+|+||+||+|.+...        ++..||||++.....     .....+.+|+++|++|+|+|||. 
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~--------~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~   86 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGD--------PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQ   86 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCC--------CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcE
Confidence            4456899999999999999999987641        466789998753311     12345889999999999999985 


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc-CCCcEEecccccc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF-KTSNILLDAVRAE  278 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL-Kp~NILl~~~~~~  278 (511)
                      ++++    +..|||||||+|++|.. +..    ..   ...++.|++.||.|||+++   |+|||| ||+|||++     
T Consensus        87 l~~~----~~~~LVmE~~~G~~L~~-~~~----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~-----  146 (365)
T PRK09188         87 LLAT----GKDGLVRGWTEGVPLHL-ARP----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMG-----  146 (365)
T ss_pred             EEEc----CCcEEEEEccCCCCHHH-hCc----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEc-----
Confidence            4432    45799999999999963 211    11   1467889999999999998   999999 99999997     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCccee------eeeccccccccCCcccccC------CCCcc
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV------STRVMGTYGYAAPEYVMTG------HLTSR  346 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~------~~~~~Gt~~y~aPE~~~~~------~~~~~  346 (511)
                                          .++.+||+|||+|+..........      .+...+++.|+|||++...      ..+..
T Consensus       147 --------------------~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~  206 (365)
T PRK09188        147 --------------------PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLP  206 (365)
T ss_pred             --------------------CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccc
Confidence                                366799999999997654321111      1346789999999998632      22344


Q ss_pred             ccch
Q 010432          347 SDVY  350 (511)
Q Consensus       347 ~DIw  350 (511)
                      .|-|
T Consensus       207 ~dgW  210 (365)
T PRK09188        207 SRIW  210 (365)
T ss_pred             cCcE
Confidence            6666

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.93  E-value=1.3e-24  Score=215.62  Aligned_cols=259  Identities=32%  Similarity=0.420  Sum_probs=196.4

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCC-CcceEeeEEEe
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHL-NLVKLIGYCIE  206 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~-nIv~l~~~~~~  206 (511)
                      |.+...||.|+||.||++.+.            ..+|+|.+.......   ...+.+|+.++..+.|+ +|+++++++..
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~------------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~   69 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR------------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD   69 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec------------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec
Confidence            667788999999999999875            379999997664432   56789999999999988 79999999977


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ....+++++|+.+++|.+++....  ..+.......++.|++.+|.|+|..+   ++||||||+|||++.          
T Consensus        70 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~----------  136 (384)
T COG0515          70 EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDR----------  136 (384)
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecC----------
Confidence            777899999999999997775443  26889999999999999999999999   999999999999984          


Q ss_pred             eeeeccccccccccccC-ceeeecCCCcccCCCCCcce----eeeeccccccccCCccccc---CCCCccccchhHHHHH
Q 010432          285 FCIYYGLFFNNMLFQDY-NAKLSDFGLAKDGPEGDKTH----VSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVL  356 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~-~~kl~DFGla~~~~~~~~~~----~~~~~~Gt~~y~aPE~~~~---~~~~~~~DIwSlGvil  356 (511)
                                     .. .++++|||+++.........    ......||..|+|||.+.+   ..++...|+||+|+++
T Consensus       137 ---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~  201 (384)
T COG0515         137 ---------------DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITL  201 (384)
T ss_pred             ---------------CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHH
Confidence                           44 69999999998654433221    2345789999999999987   5788999999999999


Q ss_pred             HHHHhCCCCCCCCCCC-CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPN-GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +++++|..||...... ...............      .................+.+++..|+..+|..|.+..+....
T Consensus       202 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         202 YELLTGLPPFEGEKNSSATSQTLKIILELPTP------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHhCCCCCCCCCccccHHHHHHHHHhcCCc------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            9999999997654321 011111111111000      000000000001223578899999999999999998877654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=2.8e-25  Score=209.34  Aligned_cols=209  Identities=21%  Similarity=0.278  Sum_probs=176.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~  207 (511)
                      -+|++.++||+|+||+.|.|+..-         +++.||||.-......  -++..|.+..+.| ..+.|..+|.+..++
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~---------nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG   96 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLY---------NNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEG   96 (449)
T ss_pred             ccceeccccccCcceeeecccccc---------cCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeecccc
Confidence            479999999999999999998876         5779999976544321  3566788877777 568999999888888


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      -+-.||||++ |.+|++++.-.+..++..++..++.|++.-++|+|++.   +|+|||||+|+||+.++..         
T Consensus        97 ~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k---------  163 (449)
T KOG1165|consen   97 KYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTK---------  163 (449)
T ss_pred             chhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCC---------
Confidence            8889999999 88999998777888999999999999999999999999   9999999999999965432         


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                 +...|.|+|||+|+...+.....     ......||.+||+-....+..-+.+-|+=|||-+++..|-|
T Consensus       164 -----------~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRG  232 (449)
T KOG1165|consen  164 -----------DANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG  232 (449)
T ss_pred             -----------CCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccC
Confidence                       35668999999999876644322     22346799999999988899999999999999999999999


Q ss_pred             CCCCCCCCCC
Q 010432          363 RRSMDKNRPN  372 (511)
Q Consensus       363 ~~pf~~~~~~  372 (511)
                      ..||.+....
T Consensus       233 sLPWQGLKA~  242 (449)
T KOG1165|consen  233 SLPWQGLKAD  242 (449)
T ss_pred             CCccccccCc
Confidence            9999876544

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.92  E-value=1.5e-25  Score=202.57  Aligned_cols=264  Identities=20%  Similarity=0.212  Sum_probs=200.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC-CCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH-LNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H-~nIv~l~~~~~  205 (511)
                      ...+|.++++||.|+||.+|.|....         .|..||||+-.....  ..++..|..+.+.|+| ..|..+..|..
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~---------~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~   81 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISIT---------SGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGT   81 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeecc---------CCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhcc
Confidence            35689999999999999999998876         688999998765532  2457789999999965 56778888888


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +..+-.|||+++ |.+|++++.-....++..+++-++-|++.-++|+|.++   +|||||||+|+|.+-..         
T Consensus        82 e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgr---------  148 (341)
T KOG1163|consen   82 EKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGR---------  148 (341)
T ss_pred             ccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeecccc---------
Confidence            888999999999 88999988766678999999999999999999999998   99999999999998422         


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                   ....+.|+|||+|+...+....     .......||..|.+-....+..-+.+-|+=|+|.+|..+.
T Consensus       149 -------------h~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfn  215 (341)
T KOG1163|consen  149 -------------HCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFN  215 (341)
T ss_pred             -------------ccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeee
Confidence                         2456899999999976543221     1233468999999988777777888999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      -|..||.+.......+..+.+....-  ....+.+    -    ..++.++.-.+.-|-..--++-|...-+-+.+.
T Consensus       216 rG~LPWQglka~tk~QKyEkI~EkK~--s~~ie~L----C----~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr  282 (341)
T KOG1163|consen  216 RGSLPWQGLKAATKKQKYEKISEKKM--STPIEVL----C----KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR  282 (341)
T ss_pred             cCCCcccccchhhHHHHHHHHHHhhc--CCCHHHH----h----CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence            99999998765543332222211100  0000111    1    122456777888888888888887666555444

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=5.8e-26  Score=241.99  Aligned_cols=255  Identities=19%  Similarity=0.227  Sum_probs=185.9

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC--CcccH----HHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGH----KEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~--~~~~~----~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ....++|.|++|.|+.+......         ..++.|.....  .....    ..+..|+.+-..|.|+||+..+..+.
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~---------~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~  391 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDL---------KSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQ  391 (601)
T ss_pred             CccceeeecccCceEEEEecCCC---------ccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHh
Confidence            45568999999988887765422         23333332210  11111    12556888888999999988887777


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.....-+||||++ ||..++... ..+....+..++.|++.||.|||+.|   |.|||||++|+|+.            
T Consensus       392 ~~~~~~~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~------------  454 (601)
T KOG0590|consen  392 EIDGILQSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVT------------  454 (601)
T ss_pred             hcccchhhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEe------------
Confidence            66666666999999 999998654 46788888999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccCCCCc-cccchhHHHHHHHHHhC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTS-RSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~-~~DIwSlGvil~elltg  362 (511)
                                   .++.+||+|||.+.........  .....++|+..|+|||++.+..|.+ .+||||.|+++..|++|
T Consensus       455 -------------~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~  521 (601)
T KOG0590|consen  455 -------------ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG  521 (601)
T ss_pred             -------------cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC
Confidence                         4778999999999876544433  4556689999999999999999976 58999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      +.||.......... ...      .......+..  -........+...+.+|.+||+.||.+|.|+.+|++
T Consensus       522 ~~~Wk~a~~~~~~~-~~~------~~~~~~~~~~--~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  522 RFPWKVAKKSDNSF-KTN------NYSDQRNIFE--GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             CCccccccccccch-hhh------cccccccccc--ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            99997543332210 000      0000000000  001111233567789999999999999999999987

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.92  E-value=9.6e-26  Score=206.88  Aligned_cols=248  Identities=22%  Similarity=0.346  Sum_probs=189.9

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ..++.+|.+...|..|+|+++           |..+++|+++......  .++|..|.-.|+-+.||||+.+++.|....
T Consensus       192 lnl~tkl~e~hsgelwrgrwq-----------gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp  260 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ-----------GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP  260 (448)
T ss_pred             hhhhhhhccCCCccccccccc-----------CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC
Confidence            344557899999999999996           4467788887654332  257889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ++.++..||+.|+|+..|+... ..++..++.+++.+|++|++|||+.. +-|.---|....++|+              
T Consensus       261 nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmid--------------  325 (448)
T KOG0195|consen  261 NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMID--------------  325 (448)
T ss_pred             CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEec--------------
Confidence            9999999999999999997653 34678889999999999999999976 3244456888999998              


Q ss_pred             eccccccccccccCceeee--cCCCcccCCCCCcceeeeeccccccccCCcccccCCCC---ccccchhHHHHHHHHHhC
Q 010432          288 YYGLFFNNMLFQDYNAKLS--DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT---SRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~---~~~DIwSlGvil~elltg  362 (511)
                                 ++...+|+  |--++...         ....-.+.||+||.+...+-+   .++|+|||.++||||.|.
T Consensus       326 -----------edltarismad~kfsfqe---------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tr  385 (448)
T KOG0195|consen  326 -----------EDLTARISMADTKFSFQE---------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTR  385 (448)
T ss_pred             -----------chhhhheecccceeeeec---------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcc
Confidence                       35555553  32222111         011236889999999866543   479999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ..||....+.....                .+.-..++..+++..+..+.+||.-|+..||.+||.+..|+-.|+++.
T Consensus       386 evpfadlspmecgm----------------kialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  386 EVPFADLSPMECGM----------------KIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ccccccCCchhhhh----------------hhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            99998765543211                122223444555566788899999999999999999999999888753

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.91  E-value=2.1e-25  Score=223.09  Aligned_cols=171  Identities=25%  Similarity=0.407  Sum_probs=126.6

Q ss_pred             EEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          211 LLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ||.|++|...+|.+||.++  ....++...+.++.|++.|++|   ++   .+||||||.||++.               
T Consensus       332 yI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~---------------  390 (516)
T KOG1033|consen  332 YIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFS---------------  390 (516)
T ss_pred             hhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccc---------------
Confidence            7899999999999999643  3456788889999999999999   66   99999999999987               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCC----cceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~----~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                ++..+||.|||+........    .....+..+||..||+||++.+..|+.++||||||+||+||+. =.
T Consensus       391 ----------~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~  460 (516)
T KOG1033|consen  391 ----------DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFS  460 (516)
T ss_pred             ----------cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhc
Confidence                      46789999999998765544    1223455789999999999999999999999999999999997 22


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ..|...                   ..+..+-+..+...+. ...+.-..|+.++|...|.+||++.+.
T Consensus       461 T~~er~-------------------~t~~d~r~g~ip~~~~-~d~p~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  461 TQFERI-------------------ATLTDIRDGIIPPEFL-QDYPEEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             cHHHHH-------------------HhhhhhhcCCCChHHh-hcCcHHHHHHHHhcCCCcccCchHHHH
Confidence            222100                   0000111111111111 112345689999999999999955443

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.90  E-value=8.6e-24  Score=197.46  Aligned_cols=172  Identities=9%  Similarity=0.077  Sum_probs=133.7

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHH---------HHHHHHHHhCCCCCC
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---------WLAEVNFLGDLVHLN  196 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~---------~~~E~~il~~l~H~n  196 (511)
                      ...++|+++++||.|+||.||++..           ++..||||++..........         +.+|+..+.++.|++
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-----------~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~G   96 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-----------DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEG   96 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-----------CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCC
Confidence            4568999999999999999999644           24479999997654332222         578999999999999


Q ss_pred             cceEeeEEEeC--------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCC
Q 010432          197 LVKLIGYCIED--------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS  268 (511)
Q Consensus       197 Iv~l~~~~~~~--------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~  268 (511)
                      |..+.+++...        ...+|||||++|.+|.++.     .++.    ....+|+.+|..||..+   |+||||||+
T Consensus        97 I~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~  164 (232)
T PRK10359         97 LASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLHQHG---MVSGDPHKG  164 (232)
T ss_pred             CCcceEeeeecccccccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHHHcC---CccCCCChH
Confidence            99999886643        3578999999999998874     2222    24568999999999999   999999999


Q ss_pred             cEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCcccc
Q 010432          269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD  348 (511)
Q Consensus       269 NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~D  348 (511)
                      |||++                         +++ ++|+|||...........              ..++....|+.++|
T Consensus       165 Nili~-------------------------~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~d  204 (232)
T PRK10359        165 NFIVS-------------------------KNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNE  204 (232)
T ss_pred             HEEEe-------------------------CCC-EEEEECCCcccccchhhH--------------HHHHHHhHhccccc
Confidence            99998                         355 999999998765332111              01345667788999


Q ss_pred             chhHHHHHHHHH
Q 010432          349 VYSFGVVLLEML  360 (511)
Q Consensus       349 IwSlGvil~ell  360 (511)
                      ||+||+++..+.
T Consensus       205 i~~lg~~~~~~~  216 (232)
T PRK10359        205 IKDLGYYLLIYK  216 (232)
T ss_pred             ccceeEeehHHH
Confidence            999999887665

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.3e-24  Score=219.58  Aligned_cols=229  Identities=28%  Similarity=0.348  Sum_probs=182.9

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH--HHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~--~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~l  212 (511)
                      .+|+|+||.|++++-...      ...|..||+|++++......  .....|..++..++ ||.+|+++..++.+...++
T Consensus         1 vlg~g~~gkvfLvrk~~g------~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l   74 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGG------ADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYL   74 (612)
T ss_pred             CCCcCCCcchHHHHHhcc------ccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhH
Confidence            379999999998754321      22578899999986543221  13456888898886 9999999999999999999


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      +++|..+|+|...+.... .+.+.....+...++.+++++|..+   |+|||+|++||+++                   
T Consensus        75 ~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld-------------------  131 (612)
T KOG0603|consen   75 ILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLL-------------------  131 (612)
T ss_pred             hhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeec-------------------
Confidence            999999999998885543 4666677777888999999999999   99999999999999                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  372 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~  372 (511)
                            .++++++.|||+++..-....      .|||..|||||++.  .....+|+||||++++||+||..||..    
T Consensus       132 ------~~Ghi~~tdfglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----  193 (612)
T KOG0603|consen  132 ------LEGHIKLTDFGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----  193 (612)
T ss_pred             ------ccCccccCCchhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----
Confidence                  488999999999997655332      28999999999887  677899999999999999999999975    


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                         +....             ++.  ....++...+..+.+++..++..+|.+|.-.
T Consensus       194 ---~~~~~-------------Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  194 ---DTMKR-------------ILK--AELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             ---HHHHH-------------Hhh--hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence               11111             110  1223455667888999999999999999754

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=8.6e-23  Score=188.29  Aligned_cols=140  Identities=17%  Similarity=0.163  Sum_probs=107.6

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--c-------H-----------------HHHHHHHH
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--G-------H-----------------KEWLAEVN  187 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~-------~-----------------~~~~~E~~  187 (511)
                      ...||+|+||.||+|.+.          +|+.||||+++.....  .       .                 ....+|+.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05147           2 NGCISTGKEANVYHATTA----------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMR   71 (190)
T ss_pred             CCccccccceEEEEEECC----------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHH
Confidence            468999999999999874          4779999999764221  0       0                 11235999


Q ss_pred             HHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEecccC
Q 010432          188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL-HEEAERPVIYRDFK  266 (511)
Q Consensus       188 il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yL-H~~~~~~iiHrDLK  266 (511)
                      +|.++.|+++.....+.. . ..+|||||+++++|...+.. ...++...+..++.|++.+|.|| |+.+   |||||||
T Consensus        72 ~l~~l~~~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlk  145 (190)
T cd05147          72 NLKRLVTAGIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLS  145 (190)
T ss_pred             HHHHHHHCCCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            999998877644333222 2 23899999988877655333 34788999999999999999999 6888   9999999


Q ss_pred             CCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCC
Q 010432          267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP  315 (511)
Q Consensus       267 p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~  315 (511)
                      |+|||++                          ++.++|+|||+|....
T Consensus       146 P~NIli~--------------------------~~~v~LiDFG~a~~~~  168 (190)
T cd05147         146 EYNLLYH--------------------------DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             HHHEEEE--------------------------CCcEEEEEccccccCC
Confidence            9999997                          3569999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.7e-22  Score=194.65  Aligned_cols=267  Identities=19%  Similarity=0.246  Sum_probs=176.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCc-c----------C---------------CCCcEEEEEEecCCCcc-cH
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPV-K----------P---------------GTGLTVAVKTLNHDGLQ-GH  179 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~-~----------~---------------~~~~~vAvK~~~~~~~~-~~  179 (511)
                      ..++|++.+.||+|..+.||.|+...++.... .          +               ....+.|||.+-.-... ..
T Consensus       155 tiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~  234 (598)
T KOG4158|consen  155 TIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGD  234 (598)
T ss_pred             chhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCch
Confidence            44679999999999999999998875321100 0          0               01235677766432211 11


Q ss_pred             HH----HHHHH------H--------HHhC--------CCCCCcceEeeEEEeC--------------------------
Q 010432          180 KE----WLAEV------N--------FLGD--------LVHLNLVKLIGYCIED--------------------------  207 (511)
Q Consensus       180 ~~----~~~E~------~--------il~~--------l~H~nIv~l~~~~~~~--------------------------  207 (511)
                      ..    +-+|.      .        ..+.        -.|||||+++++|.+.                          
T Consensus       235 ~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~  314 (598)
T KOG4158|consen  235 AHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGE  314 (598)
T ss_pred             HHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCC
Confidence            11    11221      0        1111        2599999999987642                          


Q ss_pred             -CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 -DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       ..+|+||.-.+ .+|.+++..+  ..+.....-++.|+++|+.|||.++   |.|||||.+||||.-.++         
T Consensus       315 ~~tlylvMkrY~-~tLr~yl~~~--~~s~r~~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD---------  379 (598)
T KOG4158|consen  315 PKTLYLVMKRYR-QTLREYLWTR--HRSYRTGRVILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDD---------  379 (598)
T ss_pred             CceEEEehhcch-hhHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHcc---chhhcccccceEEEecCC---------
Confidence             14689998874 4999999654  3456667778899999999999999   999999999999975322         


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCC----cceeeeeccccccccCCcccccCC-----C-CccccchhHHHHH
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGH-----L-TSRSDVYSFGVVL  356 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~----~~~~~~~~~Gt~~y~aPE~~~~~~-----~-~~~~DIwSlGvil  356 (511)
                                  .-..+.|+|||++-......    .........|....||||+....+     . -.|+|.|+.|.+.
T Consensus       380 ------------~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Gala  447 (598)
T KOG4158|consen  380 ------------EIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALA  447 (598)
T ss_pred             ------------CCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhH
Confidence                        23568999999985433211    111122346888999999876322     1 2489999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||+++...||+........            ...+.+.--|.    .+..+++.+++|+..+|+.||.+|++..-..+.|
T Consensus       448 YEIfg~~NPFY~rGem~L~------------~r~Yqe~qLPa----lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  448 YEIFGRSNPFYKRGEMLLD------------TRTYQESQLPA----LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHHhccCCcccccchheec------------hhhhhhhhCCC----CcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence            9999999999874322110            00111111122    2334457789999999999999999865554443

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.87  E-value=2.2e-21  Score=179.36  Aligned_cols=141  Identities=17%  Similarity=0.151  Sum_probs=109.4

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---------------------c-----HHHHHHHHH
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---------------------G-----HKEWLAEVN  187 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---------------------~-----~~~~~~E~~  187 (511)
                      ...||+|+||.||+|.+.          +|+.||||+++.....                     .     ...+.+|..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05145           2 NGCISTGKEANVYHARTG----------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFR   71 (190)
T ss_pred             CceeecCCCcEEEEEEcC----------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHH
Confidence            568999999999999864          4779999999865311                     0     112357899


Q ss_pred             HHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccC
Q 010432          188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFK  266 (511)
Q Consensus       188 il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLK  266 (511)
                      .+.++.|++|.....+....  .+|||||++|+++...+.. ...++......++.|++.+|.+||+ .+   |+|||||
T Consensus        72 ~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlk  145 (190)
T cd05145          72 NLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLS  145 (190)
T ss_pred             HHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCC
Confidence            99999999875544443332  4899999988765443222 2457788899999999999999999 88   9999999


Q ss_pred             CCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       267 p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      |+|||++                          ++.++|+|||++.....
T Consensus       146 P~NIll~--------------------------~~~~~liDFG~a~~~~~  169 (190)
T cd05145         146 EYNILYH--------------------------DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             hhhEEEE--------------------------CCCEEEEEcccceecCC
Confidence            9999997                          45699999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.86  E-value=3.3e-21  Score=179.50  Aligned_cols=141  Identities=18%  Similarity=0.210  Sum_probs=108.4

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-----CCCCcceEeeEEEe
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-----VHLNLVKLIGYCIE  206 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-----~H~nIv~l~~~~~~  206 (511)
                      .-.++||+|+||.||.  +..         ++.. +||++........+.+.+|+.+++.|     +||||++++|++.+
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~---------~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et   72 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPE---------DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVET   72 (210)
T ss_pred             CCcceecCCCceEEEE--CCC---------CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEe
Confidence            3456899999999995  443         3334 69998765444556789999999999     67999999999988


Q ss_pred             CC---eEE-EEEEc--cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          207 DD---QRL-LVYEF--MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL-AFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       207 ~~---~~~-lv~E~--~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL-~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      +.   .++ +||||  +.+|+|.+++.+.  .+++.  ..++.|++.++ +|||+++   ||||||||+|||++....  
T Consensus        73 ~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~--  143 (210)
T PRK10345         73 DCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISE--  143 (210)
T ss_pred             CCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCC--
Confidence            63   434 78999  5579999999542  35555  35677888888 9999999   999999999999974221  


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcc
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK  312 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~  312 (511)
                                         .+..++|+||+.+.
T Consensus       144 -------------------~~~~~~LiDg~G~~  157 (210)
T PRK10345        144 -------------------SEVIPVVCDNIGES  157 (210)
T ss_pred             -------------------CCCcEEEEECCCCc
Confidence                               24579999955443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.86  E-value=1.1e-22  Score=216.86  Aligned_cols=252  Identities=23%  Similarity=0.246  Sum_probs=177.9

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHH---HHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHK---EWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~---~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +|...+.||.+.|=+|.+|++++          |. |+||++-+.. ....+   +.+.|++ ...++|||.+.+.-+..
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e----------G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~   91 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE----------GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV   91 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC----------ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH
Confidence            56667889999999999998865          44 8999986543 23333   3445555 55669999999988777


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+...|||=+|.. -+|++.|..+. .+...+.+.|+.||+.||.-+|..+   |+|+|||.+||||++           
T Consensus        92 t~kAAylvRqyvk-hnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTS-----------  155 (1431)
T KOG1240|consen   92 TDKAAYLVRQYVK-HNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITS-----------  155 (1431)
T ss_pred             hhHHHHHHHHHHh-hhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEee-----------
Confidence            7777889999994 49999986543 4667778889999999999999999   999999999999995           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCC--CC---cceeeeeccccccccCCcccccC----------C-CCccccc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE--GD---KTHVSTRVMGTYGYAAPEYVMTG----------H-LTSRSDV  349 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~--~~---~~~~~~~~~Gt~~y~aPE~~~~~----------~-~~~~~DI  349 (511)
                                    -..+.|+||..-+...-  ++   ......+...-..|+|||.+...          . .+++-||
T Consensus       156 --------------WNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDI  221 (1431)
T KOG1240|consen  156 --------------WNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDI  221 (1431)
T ss_pred             --------------echhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhh
Confidence                          44578899877664321  11   11111112223479999987531          2 6778999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      ||+||+++||++ |++||.-      .++..+-...........+.+           +...++.|+..|++.||.+|.+
T Consensus       222 FS~GCViaELf~Eg~PlF~L------SQL~aYr~~~~~~~e~~Le~I-----------ed~~~Rnlil~Mi~rdPs~RlS  284 (1431)
T KOG1240|consen  222 FSAGCVIAELFLEGRPLFTL------SQLLAYRSGNADDPEQLLEKI-----------EDVSLRNLILSMIQRDPSKRLS  284 (1431)
T ss_pred             hhhhHHHHHHHhcCCCcccH------HHHHhHhccCccCHHHHHHhC-----------cCccHHHHHHHHHccCchhccC
Confidence            999999999998 5788752      122222111000000011111           1235789999999999999999


Q ss_pred             HHHHHHHhcCCC
Q 010432          429 MSEVVEALKPLP  440 (511)
Q Consensus       429 ~~eil~~L~~l~  440 (511)
                      +++.|+.-..+.
T Consensus       285 AedyL~~yrG~~  296 (1431)
T KOG1240|consen  285 AEDYLQKYRGLV  296 (1431)
T ss_pred             HHHHHHhhhccc
Confidence            999998755543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=2e-21  Score=177.74  Aligned_cols=188  Identities=18%  Similarity=0.084  Sum_probs=138.4

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc----HHHHHHHHHHHhCCC-CCCcceEeeEEEe
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG----HKEWLAEVNFLGDLV-HLNLVKLIGYCIE  206 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~----~~~~~~E~~il~~l~-H~nIv~l~~~~~~  206 (511)
                      .+...|++|+||+||.+..           .+..++.+.+.....-.    ...+.+|+++|++|. |++|++++++   
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-----------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---   70 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-----------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---   70 (218)
T ss_pred             ccceeecCCCcceEEEeec-----------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---
Confidence            3456899999999997754           35678888776554311    124778999999995 5889999886   


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc-CCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF-KTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL-Kp~NILl~~~~~~~~~~~~~  285 (511)
                       +..+++|||+.|.+|.+.+..        ....++.|++.+|.++|++|   |+|||| ||+|||++            
T Consensus        71 -~~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~------------  126 (218)
T PRK12274         71 -DGRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQ------------  126 (218)
T ss_pred             -cCEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEc------------
Confidence             346999999999998754311        11357789999999999999   999999 79999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc---ee--------eeeccccccccCCcccccC-CCC-ccccchhH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---HV--------STRVMGTYGYAAPEYVMTG-HLT-SRSDVYSF  352 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---~~--------~~~~~Gt~~y~aPE~~~~~-~~~-~~~DIwSl  352 (511)
                                   .++.++|+|||+|.........   ..        ..-...++.|++|+.-.-. ..+ ...++++.
T Consensus       127 -------------~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~  193 (218)
T PRK12274        127 -------------EDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFAT  193 (218)
T ss_pred             -------------CCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHh
Confidence                         3677999999999865443210   00        0012357778888744321 233 56799999


Q ss_pred             HHHHHHHHhCCCCCCCCC
Q 010432          353 GVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~  370 (511)
                      |+.+|.++|++.++....
T Consensus       194 g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        194 GKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             cchHHHHHhccCCccccC
Confidence            999999999998876543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.86  E-value=2.6e-22  Score=214.10  Aligned_cols=209  Identities=26%  Similarity=0.380  Sum_probs=147.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|..+++|..|+||.||.++++.         +.+.+|+| +++...     +++-  ||.....|.+|          
T Consensus        83 ~df~~IklisngAygavylvrh~~---------trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv----------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKE---------TRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV----------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccc---------cccchhhc-ccccch-----hhhc--cccccCCccee----------
Confidence            578899999999999999999876         67789994 443321     1111  33333333333          


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                                 ||-...+.. .++++...        +.+++|||+.+   |+|||+||+|.||..              
T Consensus       136 -----------gDc~tllk~-~g~lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~--------------  178 (1205)
T KOG0606|consen  136 -----------GDCATLLKN-IGPLPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITS--------------  178 (1205)
T ss_pred             -----------chhhhhccc-CCCCcchh--------hHHhHhhccCC---eecCCCCCCcceeee--------------
Confidence                       565555532 23444333        67899999988   999999999999995              


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcce-------------eeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-------------VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-------------~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                 -+++|+.|||+++.........             ....++||+.|+|||++....|+..+|+|++|+|
T Consensus       179 -----------mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiI  247 (1205)
T KOG0606|consen  179 -----------MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGII  247 (1205)
T ss_pred             -----------cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHH
Confidence                       6789999999998542211110             1224699999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      +||.+.|+.||.+..+.....   .+   +.+...+.+-         ......++++++.++|+.+|..|-
T Consensus       248 lyeFLVgcvpffGdtpeelfg---~v---isd~i~wpE~---------dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  248 LYEFLVGCVPFFGDTPEELFG---QV---ISDDIEWPEE---------DEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             HHHHheeeeeccCCCHHHHHh---hh---hhhhcccccc---------CcCCCHHHHHHHHHHHHhChHhhc
Confidence            999999999999875542211   11   1111111111         112257889999999999999996

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.86  E-value=1.9e-21  Score=198.48  Aligned_cols=218  Identities=25%  Similarity=0.400  Sum_probs=165.6

Q ss_pred             HhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe-EecccCC
Q 010432          189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV-IYRDFKT  267 (511)
Q Consensus       189 l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~i-iHrDLKp  267 (511)
                      |+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+......+++.....++++|+.||.|||.--   | .|+.|++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP---IGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc---ceeeeeecc
Confidence            46789999999999999999999999999999999999887788999999999999999999999854   4 9999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC---C--
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---H--  342 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~---~--  342 (511)
                      .|++++.                         ...+||+|||+.................-..-|.|||.+...   .  
T Consensus        78 ~nClvd~-------------------------~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~  132 (484)
T KOG1023|consen   78 SNCLVDS-------------------------RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLE  132 (484)
T ss_pred             ccceeee-------------------------eEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccccccc
Confidence            9999994                         788999999999876431111111122234679999998753   1  


Q ss_pred             --CCccccchhHHHHHHHHHhCCCCCCCCCCCCc-hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhc
Q 010432          343 --LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE-HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       343 --~~~~~DIwSlGvil~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl  419 (511)
                        .+.+.||||||++++|+++...||........ ..++..+..      .......|.+....  +..+.+..++..||
T Consensus       133 ~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~------~~~~~~rP~i~~~~--e~~~~l~~l~~~cw  204 (484)
T KOG1023|consen  133 SALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK------GGSNPFRPSIELLN--ELPPELLLLVARCW  204 (484)
T ss_pred             ccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh------cCCCCcCcchhhhh--hcchHHHHHHHHhc
Confidence              46679999999999999999999986433322 223322221      00111222221111  33457899999999


Q ss_pred             ccCCCCCCCHHHHHHHhcCCCCC
Q 010432          420 SRDPKARPLMSEVVEALKPLPNL  442 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~L~~l~~~  442 (511)
                      ..+|.+||++..|-..++.+...
T Consensus       205 ~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  205 EEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             ccChhhCccHHHHHhhhhhhccc
Confidence            99999999999999888776553

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.85  E-value=4.8e-21  Score=184.34  Aligned_cols=231  Identities=22%  Similarity=0.285  Sum_probs=146.9

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCC----------CCc
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVH----------LNL  197 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H----------~nI  197 (511)
                      +.....||.|+|+.||.+++..         |++.+|||++.....   ...+++.+|.-....+.+          -.+
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~---------t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~   84 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVE---------TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRF   84 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT---------TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B
T ss_pred             EEEccccccCCceEEEEEEEcc---------CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceE
Confidence            4455689999999999999976         789999999864432   223456666544444322          112


Q ss_pred             ceEeeEE---------EeCC--------eEEEEEEccCCCCHHHHHh---hCCC---CCCHHHHHHHHHHHHHHHHHHhc
Q 010432          198 VKLIGYC---------IEDD--------QRLLVYEFMPRGSLENHLF---RRSL---PLPWSIRMKIALGAAKGLAFLHE  254 (511)
Q Consensus       198 v~l~~~~---------~~~~--------~~~lv~E~~~~g~L~~~l~---~~~~---~l~~~~~~~i~~qi~~gL~yLH~  254 (511)
                      +--++..         ....        ..+++|+-+ .+||.+++.   ....   .+....++.+..|++..+++||+
T Consensus        85 l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~  163 (288)
T PF14531_consen   85 LVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS  163 (288)
T ss_dssp             ---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh
Confidence            2112211         1111        236788877 568888753   2221   23345556777999999999999


Q ss_pred             CCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccC
Q 010432          255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA  334 (511)
Q Consensus       255 ~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~a  334 (511)
                      .|   |||+||||+|+|++                         .++.++|+||+.....+...    .. ...+..|.+
T Consensus       164 ~G---lVHgdi~~~nfll~-------------------------~~G~v~Lg~F~~~~r~g~~~----~~-~~~~~~~~P  210 (288)
T PF14531_consen  164 YG---LVHGDIKPENFLLD-------------------------QDGGVFLGDFSSLVRAGTRY----RC-SEFPVAFTP  210 (288)
T ss_dssp             TT---EEEST-SGGGEEE--------------------------TTS-EEE--GGGEEETTEEE----EG-GGS-TTTS-
T ss_pred             cc---eEecccceeeEEEc-------------------------CCCCEEEcChHHHeecCcee----ec-cCCCcccCC
Confidence            99   99999999999999                         58899999999887654311    11 234678999


Q ss_pred             Cccccc--------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHH
Q 010432          335 PEYVMT--------GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK  406 (511)
Q Consensus       335 PE~~~~--------~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (511)
                      ||....        -.++.+.|.|+||+++|.|++|..||....+......            .         -.... +
T Consensus       211 Pe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------~---------f~~C~-~  268 (288)
T PF14531_consen  211 PELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------------D---------FSRCR-D  268 (288)
T ss_dssp             HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------G---------GTTSS--
T ss_pred             hhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------------c---------chhcC-C
Confidence            997643        2578899999999999999999999975432211100            0         11222 4


Q ss_pred             HHHHHHHHHHHhcccCCCCC
Q 010432          407 GAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       407 ~~~~~~~Li~~cl~~dP~~R  426 (511)
                      .++.++.||..+|++||.+|
T Consensus       269 ~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  269 MPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --HHHHHHHHHHT-SSGGGS
T ss_pred             cCHHHHHHHHHHccCCcccC
Confidence            57889999999999999988

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=5.6e-21  Score=207.83  Aligned_cols=207  Identities=19%  Similarity=0.210  Sum_probs=161.3

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC---CCCcce
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV---HLNLVK  199 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---H~nIv~  199 (511)
                      +.++....|.+.+.||+|+||.||+|...+          |+.||||+-+....-   +|.-=.+++.+|+   -+-|..
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~----------~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~  758 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN----------GKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMH  758 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCC----------CcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHH
Confidence            334556788999999999999999998754          779999988765431   1211223344443   234566


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      +..++.-.+.-+||+||.+.|+|.+++. ....+++..++.+..|++.-|++||..+   |||+||||+|+||...-...
T Consensus       759 ~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~  834 (974)
T KOG1166|consen  759 ISSAHVFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICAD  834 (974)
T ss_pred             HHHHHccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCC
Confidence            6666666677789999999999999996 4557899999999999999999999999   99999999999998532211


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                      .                  +...++|+|||.+..+.--.........++|-.+-.+|+..|.+|+..+|.|.|..+++-|
T Consensus       835 ~------------------~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~m  896 (974)
T KOG1166|consen  835 S------------------DSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVM  896 (974)
T ss_pred             C------------------cccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHH
Confidence            0                  2556899999999865433222334557889999999999999999999999999999999


Q ss_pred             HhCCC
Q 010432          360 LTGRR  364 (511)
Q Consensus       360 ltg~~  364 (511)
                      |.|+.
T Consensus       897 LFG~y  901 (974)
T KOG1166|consen  897 LFGKY  901 (974)
T ss_pred             HHHHH
Confidence            99864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=7.1e-19  Score=165.37  Aligned_cols=134  Identities=18%  Similarity=0.260  Sum_probs=111.2

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--------HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--------HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--------~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      +.||+|++|.||+|.+           .|..|+||+........        ...+.+|+.++..+.|++|+....++..
T Consensus         2 ~~l~~G~~~~vy~~~~-----------~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~   70 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-----------LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD   70 (211)
T ss_pred             cccccCceEEEEEEee-----------CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe
Confidence            5799999999999986           35579999876433211        1357789999999999998877777777


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||++|++|.+++....    . .+..++.+++.+|.+||..+   ++|+||+|.|||++             
T Consensus        71 ~~~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-------------  129 (211)
T PRK14879         71 PENFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-------------  129 (211)
T ss_pred             CCCCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-------------
Confidence            788899999999999999885422    2 77889999999999999998   99999999999997             


Q ss_pred             eeccccccccccccCceeeecCCCccc
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                                   +..++|+|||++..
T Consensus       130 -------------~~~~~liDf~~a~~  143 (211)
T PRK14879        130 -------------GGKIYLIDFGLAEF  143 (211)
T ss_pred             -------------CCCEEEEECCcccC
Confidence                         44589999999875

>smart00090 RIO RIO-like kinase

Probab=99.79  E-value=5.5e-19  Score=168.48  Aligned_cols=145  Identities=18%  Similarity=0.160  Sum_probs=109.5

Q ss_pred             CCCCCCccccCCCceEEEEE-EcCCCCCCccCCCCcEEEEEEecCCCcc------------------------cHHHHHH
Q 010432          130 NFRPESLLGEGGFGCVFKGW-IEENGTAPVKPGTGLTVAVKTLNHDGLQ------------------------GHKEWLA  184 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~~~~~~~~~~vAvK~~~~~~~~------------------------~~~~~~~  184 (511)
                      -|.+.+.||+|+||.||+|. +..         +|+.||||+++.....                        ....+.+
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~---------~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDG---------SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEK   99 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCC---------CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHH
Confidence            58889999999999999998 433         5789999999754311                        0122568


Q ss_pred             HHHHHhCCCCCC--cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 010432          185 EVNFLGDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY  262 (511)
Q Consensus       185 E~~il~~l~H~n--Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiH  262 (511)
                      |+.++.++.+..  +.+++++   . ..+|||||+.+++|..++... ..+.......++.||+.+|.|||.++.  |+|
T Consensus       100 E~~~L~~L~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH  172 (237)
T smart00090      100 EFRNLQRLYEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGE--LVH  172 (237)
T ss_pred             HHHHHHHHHhcCCCCCeeeEe---c-CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCC--EEe
Confidence            999999997533  3444442   2 358999999988887654332 345566678899999999999998653  999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      |||||+|||++                          +..++|+|||++.....
T Consensus       173 ~Dikp~NIli~--------------------------~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      173 GDLSEYNILVH--------------------------DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             CCCChhhEEEE--------------------------CCCEEEEEChhhhccCC
Confidence            99999999997                          34699999999876433

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.78  E-value=7.9e-19  Score=163.50  Aligned_cols=131  Identities=21%  Similarity=0.317  Sum_probs=105.3

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .||+|+||.||+|.+           .+..|++|........        ...++.+|++++..+.|+++.....++...
T Consensus         1 ~ig~G~~~~vy~~~~-----------~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~   69 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-----------LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP   69 (199)
T ss_pred             CCCCCceEEEEEeec-----------CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
Confidence            489999999999985           3568999986543211        124567899999999988766555556667


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||++|++|.+++.....        .++.+++.+|.+||+.+   ++|+|++|+|||++              
T Consensus        70 ~~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~--------------  124 (199)
T TIGR03724        70 DNKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR--------------  124 (199)
T ss_pred             CCCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE--------------
Confidence            778999999999999988744211        78899999999999998   99999999999997              


Q ss_pred             eccccccccccccCceeeecCCCcccC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                                  +..++|+|||++...
T Consensus       125 ------------~~~~~liDfg~a~~~  139 (199)
T TIGR03724       125 ------------DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ------------CCcEEEEECCCCcCC
Confidence                        456999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.78  E-value=1.5e-18  Score=185.51  Aligned_cols=137  Identities=23%  Similarity=0.293  Sum_probs=110.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cc------cHHHHHHHHHHHhCCCCCCcceE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQ------GHKEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~------~~~~~~~E~~il~~l~H~nIv~l  200 (511)
                      ..|...++||+|+||+||+|.+..           ..+++|+.....  ..      ..+.+.+|++++..++|++|+..
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p  401 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLG-----------RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTP  401 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecC-----------ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCee
Confidence            455678899999999999998743           234444332111  11      12457899999999999999988


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.++......++||||+++++|.+++.         ....++.+++.+|.|||+.+   |+||||||+|||++       
T Consensus       402 ~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl~-------  462 (535)
T PRK09605        402 VIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIVR-------  462 (535)
T ss_pred             EEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEEE-------
Confidence            888877778899999999999999884         34678999999999999998   99999999999994       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccC
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                                         +..++|+|||+++..
T Consensus       463 -------------------~~~~~liDFGla~~~  477 (535)
T PRK09605        463 -------------------DDRLYLIDFGLGKYS  477 (535)
T ss_pred             -------------------CCcEEEEeCcccccC
Confidence                               557999999999763

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.76  E-value=4.9e-18  Score=158.10  Aligned_cols=138  Identities=17%  Similarity=0.076  Sum_probs=107.3

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----------------------cHHHHHHHHH
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----------------------GHKEWLAEVN  187 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----------------------~~~~~~~E~~  187 (511)
                      .|.+.+.||+|+||.||+|...          +|+.||||++......                      ....+.+|+.
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~----------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   85 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP----------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFA   85 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC----------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHH
Confidence            4788899999999999999764          4779999987653210                      0113567899


Q ss_pred             HHhCCCCCC--cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc
Q 010432          188 FLGDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF  265 (511)
Q Consensus       188 il~~l~H~n--Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL  265 (511)
                      ++.++.|.+  +...++    ....++||||+++++|..+...       .....++.+++.++.++|..+   |+||||
T Consensus        86 ~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl  151 (198)
T cd05144          86 ALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHG---IIHGDL  151 (198)
T ss_pred             HHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCC---CCcCCC
Confidence            999998774  444443    2346899999999998765421       234678899999999999988   999999


Q ss_pred             CCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       266 Kp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      ||+|||++                         +++.++|+|||++.....
T Consensus       152 ~p~Nill~-------------------------~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         152 SEFNILVD-------------------------DDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             CcccEEEc-------------------------CCCcEEEEECCccccCCC
Confidence            99999998                         477899999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=3.6e-19  Score=190.11  Aligned_cols=256  Identities=24%  Similarity=0.283  Sum_probs=190.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCC-CCCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~  206 (511)
                      .|.+.+.||+|+|+.|-......+        ....+|+|.+....  .........|..+-..+. |.|++++++...+
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~--------~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~   92 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRD--------PESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS   92 (601)
T ss_pred             cccccccccccccchhhhhhhcCC--------CcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC
Confidence            466677799999999988766432        34577888776553  111233345787777786 9999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 DDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLH-EEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l-~~~~~~l~~~~~~~i~~qi~~gL~yLH-~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+..+++++|..+|++...+ .......+...+-.++.|+..+|.|+| ..+   +.||||||+|.+++.          
T Consensus        93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~----------  159 (601)
T KOG0590|consen   93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDE----------  159 (601)
T ss_pred             CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhcc----------
Confidence            99999999999999999988 443335667777889999999999999 877   999999999999984          


Q ss_pred             eeeeccccccccccccC-ceeeecCCCcccCCC-CCcceeeeeccc-cccccCCcccccC-CCCccccchhHHHHHHHHH
Q 010432          285 FCIYYGLFFNNMLFQDY-NAKLSDFGLAKDGPE-GDKTHVSTRVMG-TYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~-~~kl~DFGla~~~~~-~~~~~~~~~~~G-t~~y~aPE~~~~~-~~~~~~DIwSlGvil~ell  360 (511)
                                     .+ .+|++|||+|..... ..........+| ++.|+|||...+. -.....|+||.|+++.-++
T Consensus       160 ---------------s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~  224 (601)
T KOG0590|consen  160 ---------------SGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAML  224 (601)
T ss_pred             ---------------CCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccc
Confidence                           44 799999999998766 444444555788 9999999988875 4467899999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      +|..|+......... ...|...    ..        ...............+++.+++..+|..|.+.+++..
T Consensus       225 ~g~~p~~~~~~~~~~-~~~~~~~----~~--------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  225 TGELPWDFPSRKDGR-YSSWKSN----KG--------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cCCCCcccccccccc-ceeeccc----cc--------ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            999999754332210 0001000    00        0001111122456788999999999999999888754

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.71  E-value=6e-17  Score=142.87  Aligned_cols=136  Identities=22%  Similarity=0.150  Sum_probs=112.1

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC--CCcceEeeEEEeCCeE
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH--LNLVKLIGYCIEDDQR  210 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--~nIv~l~~~~~~~~~~  210 (511)
                      +.+.||.|.++.||++...           +..++||.......  ...+.+|+.++..+.|  .++++++++....+..
T Consensus         2 ~~~~i~~g~~~~v~~~~~~-----------~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~   68 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK-----------DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWS   68 (155)
T ss_pred             cceecccccccceEEEEec-----------CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCcc
Confidence            4567999999999999873           35799999876543  4568899999999976  5899999988877889


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      +++|||++++.+..+        +......++.+++.+|.+||.....+++|+||+|+|||++                 
T Consensus        69 ~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~-----------------  123 (155)
T cd05120          69 YLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD-----------------  123 (155)
T ss_pred             EEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE-----------------
Confidence            999999988777643        4556677899999999999986444599999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                              +...++++|||+++..
T Consensus       124 --------~~~~~~l~Df~~~~~~  139 (155)
T cd05120         124 --------DGKILGIIDWEYAGYG  139 (155)
T ss_pred             --------CCcEEEEEecccccCC
Confidence                    3567999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.68  E-value=2.3e-16  Score=145.28  Aligned_cols=138  Identities=20%  Similarity=0.155  Sum_probs=96.1

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHH----------------------HHHHHHHH
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKE----------------------WLAEVNFL  189 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~----------------------~~~E~~il  189 (511)
                      .+.||+|+||+||+|.+.          +++.||||++.......  ...                      ...|...+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~----------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l   71 (187)
T cd05119           2 GGPIGTGKEADVYLALDG----------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNL   71 (187)
T ss_pred             CcccccccceeEEEEECC----------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHH
Confidence            467999999999999864          36799999987543211  111                      13466666


Q ss_pred             hCCCCCC--cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccC
Q 010432          190 GDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFK  266 (511)
Q Consensus       190 ~~l~H~n--Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLK  266 (511)
                      .++.+..  +.+.+++    ...++||||++++.+........ ... ..+..++.+++.++.++|. .+   |+|||||
T Consensus        72 ~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~  142 (187)
T cd05119          72 KRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAG---LVHGDLS  142 (187)
T ss_pred             HHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCC
Confidence            6664432  4444443    24589999999854432111110 011 5577899999999999999 88   9999999


Q ss_pred             CCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       267 p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      |+|||++                          +..++|+|||.+.....
T Consensus       143 p~Nili~--------------------------~~~~~liDfg~a~~~~~  166 (187)
T cd05119         143 EYNILVD--------------------------DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             hhhEEEE--------------------------CCcEEEEECcccccccC
Confidence            9999997                          45689999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.67  E-value=4.8e-16  Score=148.57  Aligned_cols=135  Identities=22%  Similarity=0.244  Sum_probs=102.6

Q ss_pred             Cccc-cCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-------------ccHHHHHHHHHHHhCCCCCCc--c
Q 010432          135 SLLG-EGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-------------QGHKEWLAEVNFLGDLVHLNL--V  198 (511)
Q Consensus       135 ~~lG-~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-------------~~~~~~~~E~~il~~l~H~nI--v  198 (511)
                      ..|| .||.|+||.+...           +..++||++.....             .....+.+|+.++.+|.|++|  +
T Consensus        37 ~~lg~~~g~gtv~~v~~~-----------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP  105 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-----------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVP  105 (239)
T ss_pred             ceeecCCCCccEEEEEeC-----------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCc
Confidence            3687 8999999998763           55789998854221             112457889999999998875  6


Q ss_pred             eEeeEEEeCC----eEEEEEEccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          199 KLIGYCIEDD----QRLLVYEFMPR-GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       199 ~l~~~~~~~~----~~~lv~E~~~~-g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      ..+++.....    ..+|||||++| .+|.+++...  .++..    .+.+|+.+|.+||++|   |+||||||+|||++
T Consensus       106 ~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~  176 (239)
T PRK01723        106 RPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLD  176 (239)
T ss_pred             eeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEc
Confidence            7777654322    23599999997 6899887542  34443    3568999999999999   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccC
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                      .                         +..++|+|||.+...
T Consensus       177 ~-------------------------~~~v~LIDfg~~~~~  192 (239)
T PRK01723        177 P-------------------------DGKFWLIDFDRGELR  192 (239)
T ss_pred             C-------------------------CCCEEEEECCCcccC
Confidence            3                         557999999998763

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=1.9e-16  Score=162.02  Aligned_cols=254  Identities=25%  Similarity=0.288  Sum_probs=187.9

Q ss_pred             HhcCCCCCCcccc--CCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          127 ATRNFRPESLLGE--GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       127 ~~~~y~~~~~lG~--G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      ....|.+.+.+|.  |.+|.||.+....       ...+..+|+|.-+....  .....=++|+....++ .|+|.|+.+
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~-------~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~  184 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTN-------SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDS  184 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCc-------ccCCcccccccccCCCCCccccccccchhhcccccCccccccccC
Confidence            3456778888999  9999999998722       12577899998443221  2223335677777777 599999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK----GLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~----gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ..+...+..|+-+|+| +.+|..+.......++...++.++.+...    ||.++|+..   |+|-|+||+||++..   
T Consensus       185 ~~~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~---  257 (524)
T KOG0601|consen  185 PAWEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTS---  257 (524)
T ss_pred             cccccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheeccc---
Confidence            9999999999999999 67999988777667888888888888888    999999988   999999999999984   


Q ss_pred             cccCCcceeeecccccccccccc-CceeeecCCCcccCCCCCcce---eeeeccccccccCCcccccCCCCccccchhHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQD-YNAKLSDFGLAKDGPEGDKTH---VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~-~~~kl~DFGla~~~~~~~~~~---~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                            + ...+++|||+...........   ..-+..|...|++||++ .+.++...|||+||
T Consensus       258 ----------------------~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~  314 (524)
T KOG0601|consen  258 ----------------------DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLG  314 (524)
T ss_pred             ----------------------ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchh
Confidence                                  4 678999999998876654222   12233678899999965 56789999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      .++.+..++..++...-...      |.           ++-...+..++...-+..+..++..|++.+|..|+++..+.
T Consensus       315 ev~l~~~l~~~~~~~g~~~~------W~-----------~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~  377 (524)
T KOG0601|consen  315 EVILEAILGSHLPSVGKNSS------WS-----------QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT  377 (524)
T ss_pred             hhhHhhHhhcccccCCCCCC------cc-----------ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence            99999999877664331111      10           00000011112112234555699999999999999988876


Q ss_pred             H
Q 010432          434 E  434 (511)
Q Consensus       434 ~  434 (511)
                      .
T Consensus       378 ~  378 (524)
T KOG0601|consen  378 A  378 (524)
T ss_pred             c
Confidence            5

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.51  E-value=6e-14  Score=145.55  Aligned_cols=141  Identities=20%  Similarity=0.152  Sum_probs=96.3

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH-----------------------------------
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-----------------------------------  179 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~-----------------------------------  179 (511)
                      +.||.|++|.||+|+.+          +|+.||||+.+.......                                   
T Consensus       123 ~plasaSigQVh~A~l~----------~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~  192 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV----------DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEK  192 (437)
T ss_pred             cceeeeehhheEEEEec----------CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHH
Confidence            67999999999999986          478999999875421100                                   


Q ss_pred             -----HHHHHHHHHHhCC----CCCCcceEeeEEE-eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH-H
Q 010432          180 -----KEWLAEVNFLGDL----VHLNLVKLIGYCI-EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK-G  248 (511)
Q Consensus       180 -----~~~~~E~~il~~l----~H~nIv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~-g  248 (511)
                           -+|.+|+..+.++    .|.+-|.+-.++. .....+|||||++|++|.++.........   ...++.+++. .
T Consensus       193 ~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~  269 (437)
T TIGR01982       193 TLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSF  269 (437)
T ss_pred             HHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHH
Confidence                 0134455555544    2322233222222 23457899999999999887643222222   3345555555 4


Q ss_pred             HHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       249 L~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      +..+|..|   ++|+|+||.||+++                         +++.++|+|||++.....
T Consensus       270 l~ql~~~g---~~H~D~hPgNilv~-------------------------~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       270 LNQVLRDG---FFHADLHPGNIFVL-------------------------KDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHHhCC---ceeCCCCcccEEEC-------------------------CCCcEEEEeCCCeeECCH
Confidence            67889888   99999999999997                         477899999999987643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=4e-14  Score=134.27  Aligned_cols=204  Identities=24%  Similarity=0.301  Sum_probs=136.8

Q ss_pred             HHHhCCCCCCcceEeeEEEeC-----CeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 010432          187 NFLGDLVHLNLVKLIGYCIED-----DQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAER  258 (511)
Q Consensus       187 ~il~~l~H~nIv~l~~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~  258 (511)
                      .-|-++.|.|||+++.||.+.     ....++.||+..|+|..+|++.   ...+......+|+.||+.||.|||+.. +
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence            445566899999999999764     3467899999999999999742   345777888899999999999999987 8


Q ss_pred             CeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCC--cceeeeeccccccccCCc
Q 010432          259 PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD--KTHVSTRVMGTYGYAAPE  336 (511)
Q Consensus       259 ~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~--~~~~~~~~~Gt~~y~aPE  336 (511)
                      +|||++|..+-|++..                         ++-+||.----........  .........|-++|.|||
T Consensus       198 piihgnlTc~tifiq~-------------------------ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~  252 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQH-------------------------NGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPE  252 (458)
T ss_pred             ccccCCcchhheeecC-------------------------CceEEecccCccccchhhhhhhHhhhhccccCCccccCC
Confidence            8999999999999983                         5556653211100000000  000011234678899999


Q ss_pred             ccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHH
Q 010432          337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA  416 (511)
Q Consensus       337 ~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~  416 (511)
                      .=.....+.++|||+||....||..+..--........  ......      ..+..+-+            ..-+.++.
T Consensus       253 sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~--~ee~ia------~~i~~len------------~lqr~~i~  312 (458)
T KOG1266|consen  253 SGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVE--VEENIA------NVIIGLEN------------GLQRGSIT  312 (458)
T ss_pred             cCcccccccchhhhhhhHHHHHHHHheeccCCCcceee--hhhhhh------hheeeccC------------ccccCcCc
Confidence            76666778899999999999999887642211100000  000000      00000000            11246889


Q ss_pred             HhcccCCCCCCCHHHHHHHh
Q 010432          417 HCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       417 ~cl~~dP~~RPs~~eil~~L  436 (511)
                      +|++..|..||+|.+++.+.
T Consensus       313 kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  313 KCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             ccccCCCCCCcchhhhhcCc
Confidence            99999999999999988754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=4e-14  Score=145.14  Aligned_cols=250  Identities=21%  Similarity=0.158  Sum_probs=179.9

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHH--HHHHHHHHhCC-CCCCcceEee
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--WLAEVNFLGDL-VHLNLVKLIG  202 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~--~~~E~~il~~l-~H~nIv~l~~  202 (511)
                      ....+|..+..||.|.|+.|+.+..+.        .++..|++|.+.+.......+  -+.|+.+...+ .|.++++++.
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~--------~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~  333 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRP--------EGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS  333 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecC--------CCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence            345678999999999999999987442        256689999987765443322  24677766666 6899999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .|...+..|+-.|||+++++...+. -...+.+...+.+..|++.++.++|+..   ++|+|+||+||++..        
T Consensus       334 ~W~~~r~~~ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~--------  401 (524)
T KOG0601|consen  334 SWSQLRQGYIPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISN--------  401 (524)
T ss_pred             CccccccccCchhhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeecc--------
Confidence            8988888899999999998877662 2235677788899999999999999988   999999999999984        


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeecccccccc--CCcccccCCCCccccchhHHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA--APEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~--aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                      +.+..++.|||++..+.-.     .....++-+++  +++......+..++|++|||.-+.|.+
T Consensus       402 ----------------~~~~~~~~~~~~~t~~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~  460 (524)
T KOG0601|consen  402 ----------------DGFFSKLGDFGCWTRLAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAI  460 (524)
T ss_pred             ----------------chhhhhcccccccccccee-----cccccccccccccchhhccccccccccccccccccccccc
Confidence                            1266899999998753221     11123344455  555555678899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ++...-.....        |           ..+....+ ...+.. ..++..+.+.++..++..||.+.++..+.+
T Consensus       461 ~~~~ls~~~~~--------~-----------~~i~~~~~-p~~~~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  461 TGSPLSESGVQ--------S-----------LTIRSGDT-PNLPGL-KLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             cCcccCccccc--------c-----------eeeecccc-cCCCch-HHhhhhhhhhhcCCccccchhhhhhcccch
Confidence            98653321100        0           01111000 011111 266788999999999999999988876554

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.41  E-value=8.2e-13  Score=119.45  Aligned_cols=131  Identities=19%  Similarity=0.063  Sum_probs=95.4

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcc-eEeeEEEeCCeEEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLV-KLIGYCIEDDQRLL  212 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv-~l~~~~~~~~~~~l  212 (511)
                      ++.|+.|.++.||+++.           .+..|++|+...... ....+.+|+.++..+.+.+++ +++.+.  ....++
T Consensus         3 ~~~l~~G~~~~vy~~~~-----------~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~l   68 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV-----------ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVL   68 (170)
T ss_pred             eeecCCcccCceEEEEE-----------CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeE
Confidence            35689999999999986           356899998865432 123457899999988655544 455443  334589


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA--ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ||||++|.++....      .   ....++.+++.+|+.||..+  ...++|+|++|.|||++                 
T Consensus        69 v~e~i~G~~l~~~~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-----------------  122 (170)
T cd05151          69 ITEFIEGSELLTED------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-----------------  122 (170)
T ss_pred             EEEecCCCcccccc------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-----------------
Confidence            99999998876430      1   11345678999999999876  22359999999999997                 


Q ss_pred             ccccccccccCceeeecCCCccc
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                               +..++|+|||.+..
T Consensus       123 ---------~~~~~liDf~~a~~  136 (170)
T cd05151         123 ---------DGRLWLIDWEYAGM  136 (170)
T ss_pred             ---------CCeEEEEecccccC
Confidence                     34589999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.41  E-value=4.3e-13  Score=140.93  Aligned_cols=147  Identities=16%  Similarity=0.125  Sum_probs=92.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------------------------c----
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------------------------G----  178 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------------------------~----  178 (511)
                      ..|+. +.||.|++|.||+|+++.         +|+.||||+++.....                          .    
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~---------~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~  189 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKD---------NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREV  189 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECC---------CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHH
Confidence            45666 789999999999999875         5889999999754210                          0    


Q ss_pred             ----HH------HHHHHHHHHhCCC----CCCcceEeeEEEe-CCeEEEEEEccCCCCHHHHH--hhCCC---CCCHHHH
Q 010432          179 ----HK------EWLAEVNFLGDLV----HLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHL--FRRSL---PLPWSIR  238 (511)
Q Consensus       179 ----~~------~~~~E~~il~~l~----H~nIv~l~~~~~~-~~~~~lv~E~~~~g~L~~~l--~~~~~---~l~~~~~  238 (511)
                          .+      ++.+|+..+.++.    +.+.+.+-.++.+ ....+|||||++|+.|.++-  ...+.   .+....+
T Consensus       190 v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v  269 (537)
T PRK04750        190 VAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGV  269 (537)
T ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHH
Confidence                01      1333444443332    3333333333322 34568999999999998743  22221   1222223


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       239 ~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      ..++.|+       +..|   ++|+|+||.||+++..+.                     .++.++++|||++.....
T Consensus       270 ~~~~~Qi-------f~~G---ffHaDpHPGNIlv~~~g~---------------------~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        270 EVFFTQV-------FRDG---FFHADMHPGNIFVSYDPP---------------------ENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHHHHH-------HhCC---eeeCCCChHHeEEecCCC---------------------CCCeEEEEecceEEECCH
Confidence            3344444       3456   999999999999984211                     134899999999987644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.37  E-value=1.2e-13  Score=148.50  Aligned_cols=248  Identities=21%  Similarity=0.212  Sum_probs=169.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +.|.+.+-+-+|.|+.++.+.-..         +|...++|+.......   ..+....+-.++-...||.++....-+.
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~---------sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~  874 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAG---------SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFP  874 (1205)
T ss_pred             ccceecccccCCCCcccccCCccc---------cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCC
Confidence            345666778899999998875432         5556666665443211   1122333444444445677776665556


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .....+|||+|+.+++|...|+... ..+.+....+...+..+++|||...   ++|||++|.|+|+..           
T Consensus       875 ~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~-----------  939 (1205)
T KOG0606|consen  875 CRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAY-----------  939 (1205)
T ss_pred             CCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccch---hhcccccccchhhcc-----------
Confidence            6778899999999999999886544 4555566667778889999999977   899999999999984           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCC-----------------------------CCcceeeeeccccccccCCc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-----------------------------GDKTHVSTRVMGTYGYAAPE  336 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~-----------------------------~~~~~~~~~~~Gt~~y~aPE  336 (511)
                                    +++.+++|||+......                             ...........||+.|.+||
T Consensus       940 --------------~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe 1005 (1205)
T KOG0606|consen  940 --------------DGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPE 1005 (1205)
T ss_pred             --------------cCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCc
Confidence                          56666777663321100                             00001123467999999999


Q ss_pred             ccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCcc-CCCCCHHHHHHHHHHH
Q 010432          337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL-EGHFSIKGAQKAAQLA  415 (511)
Q Consensus       337 ~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Li  415 (511)
                      .+.+......+|+|++|++++|.++|.+||....+....                ..++.... ...-+...+..+.+++
T Consensus      1006 ~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f----------------~ni~~~~~~~p~g~~~~s~~aq~~~ 1069 (1205)
T KOG0606|consen 1006 ILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF----------------ENILNRDIPWPEGPEEGSYEAQDLI 1069 (1205)
T ss_pred             ccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh----------------hccccCCCCCCCCccccChhhhhhh
Confidence            999999999999999999999999999999865443211                01111100 1111223356788999


Q ss_pred             HHhcccCCCCCCCHH
Q 010432          416 AHCLSRDPKARPLMS  430 (511)
Q Consensus       416 ~~cl~~dP~~RPs~~  430 (511)
                      .+.+..+|.+|-.+.
T Consensus      1070 ~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1070 NRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhccCchhccCcc
Confidence            999999999998765

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.34  E-value=1.6e-11  Score=112.61  Aligned_cols=146  Identities=14%  Similarity=0.101  Sum_probs=100.3

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--c-------------------c-HHHH----HHHHH
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--Q-------------------G-HKEW----LAEVN  187 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~-------------------~-~~~~----~~E~~  187 (511)
                      ...||.|--+.||.|.......   ....+..+|||+.+....  +                   . ...+    .+|++
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~---~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r   78 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNET---EQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMH   78 (197)
T ss_pred             CCccccCcceEEEEEecCcccc---cccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHH
Confidence            3579999999999997532100   011356899999864210  0                   0 1112    37999


Q ss_pred             HHhCCCC--CCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEecc
Q 010432          188 FLGDLVH--LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL-HEEAERPVIYRD  264 (511)
Q Consensus       188 il~~l~H--~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yL-H~~~~~~iiHrD  264 (511)
                      .|.++..  -++.+.+++    ...+|||||+.++.+..-..+ ...++......+..+++.+|..| |..+   |||+|
T Consensus        79 ~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGD  150 (197)
T cd05146          79 NLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHAD  150 (197)
T ss_pred             HHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCC
Confidence            9999843  466677764    356899999965444221111 12345556677889999999999 8888   99999


Q ss_pred             cCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          265 FKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       265 LKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      |++.|||+.                          ++.+.|+|||.+.....
T Consensus       151 Ls~~NIL~~--------------------------~~~v~iIDF~qav~~~h  176 (197)
T cd05146         151 LSEYNMLWH--------------------------DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             CCHHHEEEE--------------------------CCcEEEEECCCceeCCC
Confidence            999999996                          45699999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.28  E-value=6.4e-11  Score=122.93  Aligned_cols=164  Identities=16%  Similarity=0.184  Sum_probs=122.2

Q ss_pred             CCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHH
Q 010432          162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI  241 (511)
Q Consensus       162 ~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i  241 (511)
                      ++.+|.|...+...........+-++-|+.|+||||++|++.+..++..|||+|-+  -.|..++.+..    ...+...
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~----~~~v~~G  109 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG----KEEVCLG  109 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH----HHHHHHH
Confidence            67789999887765432344677889999999999999999999999999999998  36777775432    4556667


Q ss_pred             HHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce
Q 010432          242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH  321 (511)
Q Consensus       242 ~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~  321 (511)
                      +.||+.||.|||..+.  ++|++|.-+-|+++                         ..+..||++|-++......... 
T Consensus       110 l~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn-------------------------~~GeWkLggle~v~~~~~~~~~-  161 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCN--LVHGNVCKDSVFVN-------------------------ESGEWKLGGLELVSKASGFNAP-  161 (690)
T ss_pred             HHHHHHHHHHHhccCC--eeeccEeeeeEEEc-------------------------CCCcEEEeeeEEEeccccCCcc-
Confidence            8899999999985442  99999999999998                         4788999999887654332210 


Q ss_pred             eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       322 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                       .....--..|..|+.+....  -..|.|-|||+++|++.|
T Consensus       162 -~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  162 -AKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             -cccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence             00011122456666443222  457999999999999999

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.26  E-value=6.8e-11  Score=104.87  Aligned_cols=131  Identities=22%  Similarity=0.281  Sum_probs=97.1

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..|++|+-+.+|.+.+.           |..+++|.=......        ..++..+|+.+|.++.--.|..-+=+..+
T Consensus         2 ~~i~~GAEa~i~~~~~~-----------g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD   70 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-----------GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD   70 (204)
T ss_pred             chhhCCcceeEEeeecc-----------CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc
Confidence            36889999999999663           445667754332211        12346789999998864444433334556


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+...|+|||++|-.|.+.+...        ...++..|-.-+.-||..+   |||+||.++||++.             
T Consensus        71 ~~~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~-------------  126 (204)
T COG3642          71 PDNGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILS-------------  126 (204)
T ss_pred             CCCCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEe-------------
Confidence            77788999999988888888543        2456667777788899999   99999999999997             


Q ss_pred             eeccccccccccccCceeeecCCCccc
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                                   ...+.++||||+..
T Consensus       127 -------------~~~i~~IDfGLg~~  140 (204)
T COG3642         127 -------------GGRIYFIDFGLGEF  140 (204)
T ss_pred             -------------CCcEEEEECCcccc
Confidence                         44599999999975

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.25  E-value=6.1e-11  Score=104.60  Aligned_cols=145  Identities=20%  Similarity=0.194  Sum_probs=105.5

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--------ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--------QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .+.+|-+|+-+.|+++.+           .|+.+.||.-.....        -...+..+|+++|.++.--.|.--.=++
T Consensus        11 ~l~likQGAEArv~~~~~-----------~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~   79 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-----------SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIF   79 (229)
T ss_pred             cceeeeccceeeEeeecc-----------CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence            566899999999999987           467778875432221        1124578899999998654544333355


Q ss_pred             EeCCeEEEEEEccCC-CCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          205 IEDDQRLLVYEFMPR-GSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~-g~L~~~l~~~~~~-l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .+...-+|+|||++| .++.+++...... ........++.+|-..+.-||.++   |||+||..+||||..++      
T Consensus        80 ~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~------  150 (229)
T KOG3087|consen   80 IDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDG------  150 (229)
T ss_pred             EecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCC------
Confidence            666667899999966 3788888643222 223333678889999999999999   99999999999998643      


Q ss_pred             cceeeeccccccccccccCceeeecCCCccc
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                                      ....+.|+|||++..
T Consensus       151 ----------------~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  151 ----------------NQITPILIDFGLSSV  165 (229)
T ss_pred             ----------------CcCceEEEeecchhc
Confidence                            244568999999864

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.18  E-value=1.8e-10  Score=108.72  Aligned_cols=144  Identities=19%  Similarity=0.222  Sum_probs=106.1

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCC--CCcceEeeEEEeC---C
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVH--LNLVKLIGYCIED---D  208 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H--~nIv~l~~~~~~~---~  208 (511)
                      +.||.|.++.||++...+          |..|++|....... .....+.+|+.++..+.+  .++.+++.+....   +
T Consensus         4 ~~l~~G~~n~~~~v~~~~----------g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~   73 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG----------GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLG   73 (223)
T ss_pred             eecCCCccceEEEEEecC----------CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccC
Confidence            568999999999997632          46899999865432 123467899999999965  4467777776553   2


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA--------------------------------  256 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--------------------------------  256 (511)
                      ..++||||++|.+|.+.+..  ..++......++.+++.+|.+||+..                                
T Consensus        74 ~~~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (223)
T cd05154          74 TPFYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRT  151 (223)
T ss_pred             CceEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcc
Confidence            56899999999888765521  24667777778888888888888521                                


Q ss_pred             ---------------------CCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCccc
Q 010432          257 ---------------------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       257 ---------------------~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                                           ...++|+|+.|.|||++..                       .+..+.|+||+.+..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-----------------------~~~~~~iID~e~~~~  206 (223)
T cd05154         152 DEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-----------------------EPRVVAVLDWELATL  206 (223)
T ss_pred             cccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-----------------------CCcEEEEEecccccc
Confidence                                 2347999999999999831                       034578999998875

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.03  E-value=4.7e-09  Score=106.07  Aligned_cols=168  Identities=20%  Similarity=0.264  Sum_probs=125.3

Q ss_pred             CCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe----CCeEEEEEEc
Q 010432          141 GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE----DDQRLLVYEF  216 (511)
Q Consensus       141 ~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~----~~~~~lv~E~  216 (511)
                      --.+.|+++...         +|..|++|+++............-+++++++.|.|||+|..+|..    +..++||++|
T Consensus       288 ~~~Ttyk~~s~~---------DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDY  358 (655)
T KOG3741|consen  288 FSITTYKATSNV---------DGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDY  358 (655)
T ss_pred             ccceeEeeeecc---------CCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEec
Confidence            345788998876         577899999965443333333456788999999999999998873    4578999999


Q ss_pred             cCC-CCHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          217 MPR-GSLENHLFRR--------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       217 ~~~-g~L~~~l~~~--------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .++ ++|.++....              +...++..++.++.|+..||.++|+.|   +.-+-|.|.+||++.       
T Consensus       359 yP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G-------  428 (655)
T KOG3741|consen  359 YPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTG-------  428 (655)
T ss_pred             CCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeC-------
Confidence            876 5787765321              234778999999999999999999999   888999999999983       


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                        +.+++|+..|+.........                |-+..   -.+-|.=.||.+++-|.|
T Consensus       429 ------------------~~RIriS~C~i~Dvl~~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt  471 (655)
T KOG3741|consen  429 ------------------KMRIRISGCGIMDVLQEDPT----------------EPLES---QQQNDLRDLGLLLLALAT  471 (655)
T ss_pred             ------------------cceEEEecccceeeecCCCC----------------cchhH---HhhhhHHHHHHHHHHHhh
Confidence                              55788877766554433220                11111   135688899999999999


Q ss_pred             CCC
Q 010432          362 GRR  364 (511)
Q Consensus       362 g~~  364 (511)
                      |..
T Consensus       472 ~~~  474 (655)
T KOG3741|consen  472 GTE  474 (655)
T ss_pred             ccc
Confidence            854

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.95  E-value=1.6e-08  Score=97.92  Aligned_cols=146  Identities=14%  Similarity=0.036  Sum_probs=98.4

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-----------cHHHHHHHHHHHhCCCCC--CcceEee
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-----------GHKEWLAEVNFLGDLVHL--NLVKLIG  202 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-----------~~~~~~~E~~il~~l~H~--nIv~l~~  202 (511)
                      .+-.-....|++..+           .|+.|.||........           ....+.+|...+.+|...  .....++
T Consensus        29 ~v~~~~~rrvvr~~~-----------~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa   97 (268)
T PRK15123         29 VFRELEGRRTLRFEL-----------AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVA   97 (268)
T ss_pred             EEecCCCceEEEEEE-----------CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeE
Confidence            333333344666655           3668999977543311           011377899988888433  3344455


Q ss_pred             EEEe-----CCeEEEEEEccCCC-CHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          203 YCIE-----DDQRLLVYEFMPRG-SLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       203 ~~~~-----~~~~~lv~E~~~~g-~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      +...     ...-+||||++++. +|.+++... ....+......++.+++..+.-||..|   |+|+||++.|||++..
T Consensus        98 ~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~  174 (268)
T PRK15123         98 FGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLP  174 (268)
T ss_pred             EEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEecc
Confidence            5543     23468999999875 798887532 234556677789999999999999999   9999999999999731


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCccc
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                      ...                  ..++..+.|+||+.++.
T Consensus       175 ~~~------------------~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        175 FPG------------------REEDLKLSVIDLHRAQI  194 (268)
T ss_pred             ccC------------------CCCCceEEEEECCcccc
Confidence            000                  00256799999998864

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.89  E-value=1.4e-08  Score=92.85  Aligned_cols=126  Identities=22%  Similarity=0.204  Sum_probs=78.9

Q ss_pred             eEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----------------------c----HHHHHHHHHHHhCCCCC--
Q 010432          144 CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----------------------G----HKEWLAEVNFLGDLVHL--  195 (511)
Q Consensus       144 ~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----------------------~----~~~~~~E~~il~~l~H~--  195 (511)
                      .||.|...          .|..+|||+.+.....                      .    .....+|++.|.++..-  
T Consensus         1 ~Vy~~~~~----------~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv   70 (188)
T PF01163_consen    1 DVYHAIDP----------DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGV   70 (188)
T ss_dssp             EEEEEEEC----------TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-
T ss_pred             CEEEEECC----------CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCc
Confidence            38888764          3679999998643110                      0    12356799999999765  


Q ss_pred             CcceEeeEEEeCCeEEEEEEccC--CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCCCeEecccCCCcEEe
Q 010432          196 NLVKLIGYCIEDDQRLLVYEFMP--RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF-LHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       196 nIv~l~~~~~~~~~~~lv~E~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~y-LH~~~~~~iiHrDLKp~NILl  272 (511)
                      ++.+.+++.    ..+|||||+.  |..|..+. ..  .+.......++.+++..+.. +|..|   |||+||.+.|||+
T Consensus        71 ~vP~p~~~~----~~~ivME~I~~~G~~~~~l~-~~--~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv  140 (188)
T PF01163_consen   71 PVPKPYDYN----RNVIVMEYIGEDGVPLPRLK-DV--DLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILV  140 (188)
T ss_dssp             SS--EEEEE----TTEEEEE--EETTEEGGCHH-HC--GGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEE
T ss_pred             cCCcEEEEe----CCEEEEEecCCCccchhhHH-hc--cccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEe
Confidence            566666542    3479999997  54444332 21  11133455677778775655 57888   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCC
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP  315 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~  315 (511)
                      +                          +..+.|+|||.+....
T Consensus       141 ~--------------------------~~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  141 D--------------------------DGKVYIIDFGQAVDSS  157 (188)
T ss_dssp             E--------------------------TTCEEE--GTTEEETT
T ss_pred             e--------------------------cceEEEEecCcceecC
Confidence            8                          3479999999987654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.74  E-value=4.7e-07  Score=89.67  Aligned_cols=259  Identities=17%  Similarity=0.176  Sum_probs=152.2

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEE------
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYC------  204 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~------  204 (511)
                      .....||+|+-+.+|-.---           + ..+.|+..........   +-+..|... .||-+..=+.+=      
T Consensus        14 ~~gr~LgqGgea~ly~l~e~-----------~-d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G   78 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV-----------R-DQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHG   78 (637)
T ss_pred             CCCccccCCccceeeecchh-----------h-chhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhC
Confidence            45567999999999954211           1 2345777655433222   223334444 566443311111      


Q ss_pred             EeCC-eEEEEEEccCCCC-HHHHHh----hC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          205 IEDD-QRLLVYEFMPRGS-LENHLF----RR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       205 ~~~~-~~~lv~E~~~~g~-L~~~l~----~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      -+.. ..-++|..+.+-. +..++.    ++ .....|...++.++.++.+.+-||.+|   .+-+|+.++|+|++    
T Consensus        79 ~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVs----  151 (637)
T COG4248          79 GRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVS----  151 (637)
T ss_pred             CCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeee----
Confidence            1122 2567888886642 223332    11 234689999999999999999999999   88899999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSF  352 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSl  352 (511)
                                           ++..+.|.|--.-....++.   .....+|...|.+||.-.     +-.-+...|.|.|
T Consensus       152 ---------------------d~~~V~LVdsDsfqi~~ng~---~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGL  207 (637)
T COG4248         152 ---------------------DDSKVVLVDSDSFQINANGT---LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGL  207 (637)
T ss_pred             ---------------------cCceEEEEcccceeeccCCc---eEecccCccccCCHHHhccccccccCCCccccchhH
Confidence                                 47778887632222111111   122357899999999654     2344667999999


Q ss_pred             HHHHHHHHhC-CCCCCCCCCCCch-----hHHHhhhhhhccccccccccCCccCCCCCH-HHHHHHHHHHHHhccc--CC
Q 010432          353 GVVLLEMLTG-RRSMDKNRPNGEH-----NLVEWARPHLGERRRFYRLIDPRLEGHFSI-KGAQKAAQLAAHCLSR--DP  423 (511)
Q Consensus       353 Gvil~elltg-~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Li~~cl~~--dP  423 (511)
                      ||++++|+.| +.||.+.......     .-+............. ....+  ....+. -.++.+..|..+|+..  ++
T Consensus       208 avLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~-g~~p~--P~~~P~~~Lpp~vqAlF~qaF~~~~~~  284 (637)
T COG4248         208 AVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRR-GLKPP--PRSIPLSMLPPDVQALFQQAFTESGVA  284 (637)
T ss_pred             HHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccC-CCCCC--CCCCChhhcCHHHHHHHHHHhcccCCC
Confidence            9999999987 9999864322110     0000000000000000 00000  111121 1246778888899865  35


Q ss_pred             CCCCCHHHHHHHhcCC
Q 010432          424 KARPLMSEVVEALKPL  439 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l  439 (511)
                      .-|||++.-+..|..+
T Consensus       285 ~~RP~a~aW~aAl~al  300 (637)
T COG4248         285 TPRPTAKAWVAALDAL  300 (637)
T ss_pred             CCCCCHHHHHHHHHHH
Confidence            6899998877776554

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.70  E-value=2.3e-07  Score=86.69  Aligned_cols=127  Identities=22%  Similarity=0.170  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecCCCc-------ccHHHHHHHHHHHhCCC--CCCcceEeeEEEeC----CeEEEEEEccCCC-CHHHHHh
Q 010432          162 TGLTVAVKTLNHDGL-------QGHKEWLAEVNFLGDLV--HLNLVKLIGYCIED----DQRLLVYEFMPRG-SLENHLF  227 (511)
Q Consensus       162 ~~~~vAvK~~~~~~~-------~~~~~~~~E~~il~~l~--H~nIv~l~~~~~~~----~~~~lv~E~~~~g-~L~~~l~  227 (511)
                      .++.|-+|.+.....       -......+|...+..|.  .-.+.+.+++....    ...+||+|++++. +|.+++.
T Consensus        31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~  110 (206)
T PF06293_consen   31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ  110 (206)
T ss_pred             cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence            345666765432211       12235778888887774  33455666666542    2348999999874 7999886


Q ss_pred             hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeec
Q 010432          228 RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD  307 (511)
Q Consensus       228 ~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  307 (511)
                      .... .+......++.+++..+.-||.+|   |+|+||++.|||+....                      ....+.|+|
T Consensus       111 ~~~~-~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~----------------------~~~~~~lID  164 (206)
T PF06293_consen  111 QWEQ-LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDD----------------------GQYRFYLID  164 (206)
T ss_pred             hhcc-cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCC----------------------CceeEEEEc
Confidence            5322 566677889999999999999999   99999999999998522                      134789999


Q ss_pred             CCCcccC
Q 010432          308 FGLAKDG  314 (511)
Q Consensus       308 FGla~~~  314 (511)
                      |+.++..
T Consensus       165 ld~~~~~  171 (206)
T PF06293_consen  165 LDRMRFR  171 (206)
T ss_pred             chhceeC
Confidence            9988753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.66  E-value=2.4e-09  Score=110.61  Aligned_cols=186  Identities=17%  Similarity=0.101  Sum_probs=133.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCC-cceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN-LVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~n-Iv~l~~~~~~~~  208 (511)
                      .+...+-+++|++++++|.+...         +. ....+.+...     ....-++++|.+++||| .+..++-+..++
T Consensus       243 ws~~fh~fvK~altknpKkRpta---------ek-lL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~  307 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTA---------EK-LLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGED  307 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCCh---------hh-heeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCccc
Confidence            34444568999999999987543         12 2225555432     33445888999999999 778888777888


Q ss_pred             eEEEEEEccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QRLLVYEFMPRG-SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~~lv~E~~~~g-~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ..+++|++|.+| +-..........+...+...+.+.-+++|+|||+..   =+|||    |||..              
T Consensus       308 ~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s--------------  366 (829)
T KOG0576|consen  308 YLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGS--------------  366 (829)
T ss_pred             ccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----ccccc--------------
Confidence            999999999877 222111111122333444566677788999999854   38999    88876              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  ....|..||+....+....   ..+...+|+.|+|||+.....+....|+|++|+--.+|.-|-+|-
T Consensus       367 ------------~~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  367 ------------EEEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             ------------ccccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence                        4668999999998776543   234467999999999999999999999999998777777776654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.57  E-value=3.1e-08  Score=103.65  Aligned_cols=150  Identities=22%  Similarity=0.309  Sum_probs=100.9

Q ss_pred             HHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCccee-
Q 010432          244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV-  322 (511)
Q Consensus       244 qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~-  322 (511)
                      +++.||.|+|..-  .+||+.|.|++|.++.                         .+..||+.|+.+........... 
T Consensus       107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na-------------------------~~~wkl~Gf~f~v~~~~~~~~p~~  159 (700)
T KOG2137|consen  107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNA-------------------------NGDWKLAGFSFCVNANGPTEYPFS  159 (700)
T ss_pred             cccchhhhhccCc--ceeecccchhheeecc-------------------------CcceeeccchhhhccCCCCccccc
Confidence            4559999999753  4999999999999984                         66789999988765443221100 


Q ss_pred             ------eeeccccccccCCcccccCCCCccccchhHHHHHHHHH-hCCCCCCCCCCCCchhHHHhhhhhhcccccccccc
Q 010432          323 ------STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML-TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI  395 (511)
Q Consensus       323 ------~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (511)
                            ..-..-...|.|||++.+...+.++|+||+||++|-+. .|+..+............              ...
T Consensus       160 ~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~--------------~~~  225 (700)
T KOG2137|consen  160 EYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS--------------RNL  225 (700)
T ss_pred             cCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh--------------hcc
Confidence                  00112356899999999888899999999999999999 555555433221111000              000


Q ss_pred             CCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          396 DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      +..-...++...+.++++-+.+++..++.-||++..+..
T Consensus       226 ~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  226 LNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             cccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            000111222344678999999999999999997766653

>PRK09902 hypothetical protein; Provisional

Probab=98.51  E-value=2.2e-06  Score=78.97  Aligned_cols=140  Identities=17%  Similarity=0.103  Sum_probs=99.7

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC------cccHHHHHHHHHHHhCCCCC--CcceEeeEEEe--
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG------LQGHKEWLAEVNFLGDLVHL--NLVKLIGYCIE--  206 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~il~~l~H~--nIv~l~~~~~~--  206 (511)
                      -|+||.+-|++..+.           |..|-+|.-....      ......|.+|+..|.+|..-  .+.+...+...  
T Consensus        26 ~~rgG~SgV~r~~~~-----------g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~   94 (216)
T PRK09902         26 YRRNGMSGVQCVERN-----------GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKI   94 (216)
T ss_pred             cCCCCcceEEEEEeC-----------CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeecc
Confidence            478999999997763           4467788765221      12346799999999988532  24444422211  


Q ss_pred             --CCeEEEEEEccCC-CCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 --DDQRLLVYEFMPR-GSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 --~~~~~lv~E~~~~-g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                        .-..+||+|-+.+ -+|.+++.... .+.+......++.+|+..|.-||+.+   +.|+|+-+.|||++..       
T Consensus        95 ~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~-------  164 (216)
T PRK09902         95 EGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTE-------  164 (216)
T ss_pred             CCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCC-------
Confidence              1235799998754 48988885432 24567777899999999999999999   9999999999999731       


Q ss_pred             cceeeeccccccccccccCceeeecCCCccc
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                                      +...++++||--++.
T Consensus       165 ----------------g~~~v~lIDlEk~r~  179 (216)
T PRK09902        165 ----------------GKAEAGFLDLEKSRR  179 (216)
T ss_pred             ----------------CCeeEEEEEhhccch
Confidence                            133599999977664

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.50  E-value=9.8e-07  Score=83.31  Aligned_cols=136  Identities=18%  Similarity=0.093  Sum_probs=93.1

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----------------------cHHHHHHHHHH
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----------------------GHKEWLAEVNF  188 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----------------------~~~~~~~E~~i  188 (511)
                      ..+...||-|--+.||.|...          .|..+|||.=+.....                      ......+|.++
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~----------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~  162 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP----------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEA  162 (304)
T ss_pred             HhhccccccCccceEEEEECC----------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHH
Confidence            456678999999999999875          3779999965432110                      11235689999


Q ss_pred             HhCCCCC--CcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccC
Q 010432          189 LGDLVHL--NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFK  266 (511)
Q Consensus       189 l~~l~H~--nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLK  266 (511)
                      |.+|.-.  .+.+-+++    +...+||||++|-.|...-      +.....-.++..|+.-+.-+-..|   |||+|+.
T Consensus       163 L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~G---iVHGDlS  229 (304)
T COG0478         163 LQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRRG---IVHGDLS  229 (304)
T ss_pred             HHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCc
Confidence            9999544  56666553    4568999999886655321      122333344444444444444556   9999999


Q ss_pred             CCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccC
Q 010432          267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       267 p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                      +-|||++                         +++.+.++||--+...
T Consensus       230 efNIlV~-------------------------~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         230 EFNILVT-------------------------EDGDIVVIDWPQAVPI  252 (304)
T ss_pred             hheEEEe-------------------------cCCCEEEEeCcccccC
Confidence            9999999                         5778999999766543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.45  E-value=7.8e-07  Score=93.35  Aligned_cols=142  Identities=17%  Similarity=0.146  Sum_probs=90.2

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--------------------------H----H----
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--------------------------H----K----  180 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--------------------------~----~----  180 (511)
                      +.|+.++-|.||+|+++          +|+.||||+.+.+-...                          .    +    
T Consensus       131 ~PiAsASIaQVH~A~L~----------sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~  200 (517)
T COG0661         131 EPIASASIAQVHRAVLK----------SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEK  200 (517)
T ss_pred             CchhhhhHhhheeEEec----------CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHH
Confidence            57999999999999987          48899999987542110                          0    0    


Q ss_pred             ------HHHHHHHHHhCCC-----CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q 010432          181 ------EWLAEVNFLGDLV-----HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL  249 (511)
Q Consensus       181 ------~~~~E~~il~~l~-----H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL  249 (511)
                            ++.+|..-+.++.     .++|.--.=|+.-.....|+|||++|-.+.+....+...++...+.....++.  +
T Consensus       201 ~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~  278 (517)
T COG0661         201 RLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--L  278 (517)
T ss_pred             HHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--H
Confidence                  1334555444442     23322111122334567899999999888887533334455333333222222  2


Q ss_pred             HHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       250 ~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      ..+-..|   ++|.|..|.||++..                         ++.+.+.|||+......
T Consensus       279 ~q~~~dg---ffHaDpHpGNi~v~~-------------------------~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         279 RQLLRDG---FFHADPHPGNILVRS-------------------------DGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHHhcC---ccccCCCccceEEec-------------------------CCcEEEEcCcceecCCH
Confidence            2222345   999999999999994                         78899999999987654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.44  E-value=3.8e-06  Score=79.62  Aligned_cols=72  Identities=17%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCC--cceEeeEEEeCCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN--LVKLIGYCIEDDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~n--Iv~l~~~~~~~~~~~l  212 (511)
                      ..||.|..+.||+..             +..+++|......  ......+|.++++.+..-.  +.+.+++....+...+
T Consensus         7 ~~i~~G~t~~~y~~~-------------~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~gl   71 (226)
T TIGR02172         7 TQTGEGGNGESYTHK-------------TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGL   71 (226)
T ss_pred             eeecCCCCcceeEec-------------CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeee
Confidence            468999999999841             3357788876533  2345788999998885433  4677777777777889


Q ss_pred             EEEccCCCC
Q 010432          213 VYEFMPRGS  221 (511)
Q Consensus       213 v~E~~~~g~  221 (511)
                      |||+++|.+
T Consensus        72 v~e~i~G~~   80 (226)
T TIGR02172        72 IYELIVGKR   80 (226)
T ss_pred             eeeecCCcc
Confidence            999998863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.38  E-value=4.5e-06  Score=77.29  Aligned_cols=139  Identities=12%  Similarity=0.081  Sum_probs=92.5

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHH---------HHHHHHHhCCC---
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---------LAEVNFLGDLV---  193 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~---------~~E~~il~~l~---  193 (511)
                      ....+|.+.+++-......|.+-..           .|..+++|..+.......+.|         .+++..+.++.   
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei-----------~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g   96 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEI-----------DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEG   96 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEE-----------CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcC
Confidence            4457888888888888777877655           467899998876543222221         23444333332   


Q ss_pred             CCCcceEeeEEEe-----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCC
Q 010432          194 HLNLVKLIGYCIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS  268 (511)
Q Consensus       194 H~nIv~l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~  268 (511)
                      -..++.++.+...     ....+|||||++|-.|.++..     ++.    .++..|+.+|.-||..|   ++|+|..|.
T Consensus        97 ~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpg  164 (229)
T PF06176_consen   97 FTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPG  164 (229)
T ss_pred             ccccccceeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcC---CccCCCCcC
Confidence            2233333333322     234569999999988876541     222    24456778899999999   999999999


Q ss_pred             cEEeccccccccCCcceeeeccccccccccccCceeeecCCCccc
Q 010432          269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       269 NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                      |+++.                          +..++++||+..+.
T Consensus       165 NFlv~--------------------------~~~i~iID~~~k~~  183 (229)
T PF06176_consen  165 NFLVS--------------------------NNGIRIIDTQGKRM  183 (229)
T ss_pred             cEEEE--------------------------CCcEEEEECccccc
Confidence            99997                          45599999987764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.32  E-value=5.7e-06  Score=77.45  Aligned_cols=153  Identities=19%  Similarity=0.165  Sum_probs=97.4

Q ss_pred             cChHHHHHHhcCCCCCCc---cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-----------------
Q 010432          119 FTFNDLKLATRNFRPESL---LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-----------------  178 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~---lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-----------------  178 (511)
                      .+...+.....+..+...   |..|--+.||+|...          .+..||||+++......                 
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~----------~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~  104 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETG----------DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSR  104 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC----------CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCC
Confidence            444445555555555554   556666789998753          36799999997543211                 


Q ss_pred             --HHH-----HHHHHHHHhCCC--CCCcceEeeEEEeCCeEEEEEEccCCCCH-HHHHhhCCCCCCHHHHHHHHHHHHHH
Q 010432          179 --HKE-----WLAEVNFLGDLV--HLNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLPWSIRMKIALGAAKG  248 (511)
Q Consensus       179 --~~~-----~~~E~~il~~l~--H~nIv~l~~~~~~~~~~~lv~E~~~~g~L-~~~l~~~~~~l~~~~~~~i~~qi~~g  248 (511)
                        .++     ...|+.-|.++.  +-.+.+-+++.    .-.|||||+...-+ .-.|  ....+.......+..+++..
T Consensus       105 ~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L--kDv~~e~~e~~~~~~~~v~~  178 (268)
T COG1718         105 SNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL--KDVPLELEEAEGLYEDVVEY  178 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc--ccCCcCchhHHHHHHHHHHH
Confidence              011     235777777763  44444555443    24799999943210 0011  11223333567778888888


Q ss_pred             HHHHhc-CCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          249 LAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       249 L~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      +.-|-. .+   +||+||..=|||+.                          ++.+.|+|||-|....+
T Consensus       179 ~~~l~~~a~---LVHgDLSEyNiL~~--------------------------~~~p~iID~~QaV~~~h  218 (268)
T COG1718         179 MRRLYKEAG---LVHGDLSEYNILVH--------------------------DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             HHHHHHhcC---cccccchhhheEEE--------------------------CCeEEEEECccccccCC
Confidence            887766 56   99999999999997                          66799999999876543

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.27  E-value=5.6e-06  Score=75.73  Aligned_cols=115  Identities=28%  Similarity=0.393  Sum_probs=82.0

Q ss_pred             cCCCCCCccccCCC-ceEEEEEEcCCCCCCccCCCCcEEEEEEecC---CC-------cc-----------cHHHHHHHH
Q 010432          129 RNFRPESLLGEGGF-GCVFKGWIEENGTAPVKPGTGLTVAVKTLNH---DG-------LQ-----------GHKEWLAEV  186 (511)
Q Consensus       129 ~~y~~~~~lG~G~f-g~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~---~~-------~~-----------~~~~~~~E~  186 (511)
                      .+++.++.||.|.- |.||+++.           .|+.||||++..   ..       ..           ....|..|.
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-----------~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~EC  105 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-----------DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCEC  105 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-----------CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHH
Confidence            68889999999999 99999988           477999999432   10       00           012377888


Q ss_pred             HHHhCCC---CCCc--ceEeeEEEeC------------------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHH
Q 010432          187 NFLGDLV---HLNL--VKLIGYCIED------------------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL  243 (511)
Q Consensus       187 ~il~~l~---H~nI--v~l~~~~~~~------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~  243 (511)
                      +...+|+   +.++  |+.+||..-.                  ..+.||.||.+...          .+.    ..-+.
T Consensus       106 RAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~----~~~~~  171 (207)
T PF13095_consen  106 RAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQ----IRDIP  171 (207)
T ss_pred             HhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccc----hhHHH
Confidence            8887774   4566  9999987432                  12357888775533          122    22345


Q ss_pred             HHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          244 GAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       244 qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      +|.+-|..+|..+   |+-+|+|+.|..
T Consensus       172 ~~~~dl~~~~k~g---I~~~Dv~~~ny~  196 (207)
T PF13095_consen  172 QMLRDLKILHKLG---IVPRDVKPRNYR  196 (207)
T ss_pred             HHHHHHHHHHHCC---eeeccCcccccc
Confidence            6777888999999   999999999985

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.19  E-value=7e-06  Score=86.01  Aligned_cols=144  Identities=16%  Similarity=0.093  Sum_probs=90.9

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-------------------------------HH---
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-------------------------------HK---  180 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-------------------------------~~---  180 (511)
                      +.||.-+.|.||+|+.+.          |+.||||+-+..-...                               .+   
T Consensus       167 ~piaaASlaQVhrA~L~~----------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~  236 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN----------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLP  236 (538)
T ss_pred             chhhhcchhheEEEEecC----------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhH
Confidence            579999999999999874          7899999876542110                               00   


Q ss_pred             ---HHHHHHHHHhC----CCCCC------cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH
Q 010432          181 ---EWLAEVNFLGD----LVHLN------LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK  247 (511)
Q Consensus       181 ---~~~~E~~il~~----l~H~n------Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~  247 (511)
                         +|.+|++-..+    +.|-+      |.++|-  .-.....|+||||+|..+.+.-.-....++...+...+.++..
T Consensus       237 ~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~  314 (538)
T KOG1235|consen  237 QELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL  314 (538)
T ss_pred             hhcchHHHHHhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH
Confidence               13344433322    23444      333332  2234678999999998766654323334555544444444332


Q ss_pred             HHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       248 gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      -+-+.  .|   ++|+|=.|.|||+...+.                     .+..+.+-|||+......
T Consensus       315 ~qIf~--~G---ffHaDPHPGNilv~~~~~---------------------~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  315 EQIFK--TG---FFHADPHPGNILVRPNPE---------------------GDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HHHHh--cC---CccCCCCCCcEEEecCCC---------------------CCccEEEEcccccccccH
Confidence            22233  35   999999999999985321                     367899999999987654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.18  E-value=2.3e-05  Score=75.28  Aligned_cols=74  Identities=19%  Similarity=0.142  Sum_probs=52.0

Q ss_pred             cccCCC-ceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEEEE
Q 010432          137 LGEGGF-GCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       137 lG~G~f-g~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~lv~  214 (511)
                      |-.|.. ..||+....           +..+.||+.....   ...+.+|+++++.+. +--+.+++++...++..++||
T Consensus         6 ~~~g~~~~~v~~~~~~-----------~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   71 (244)
T cd05150           6 VTEGQSGATVYRLDGK-----------NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLT   71 (244)
T ss_pred             cCCCCCcCeEEEEcCC-----------CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEE
Confidence            444555 789998542           3468888876543   234668999888873 445667888777666789999


Q ss_pred             EccCCCCHHH
Q 010432          215 EFMPRGSLEN  224 (511)
Q Consensus       215 E~~~~g~L~~  224 (511)
                      |+++|.+|..
T Consensus        72 e~i~G~~l~~   81 (244)
T cd05150          72 SAVPGVPAAA   81 (244)
T ss_pred             EeeCCccHhH
Confidence            9999877654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.17  E-value=2.7e-05  Score=71.83  Aligned_cols=121  Identities=17%  Similarity=0.220  Sum_probs=85.0

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC----------------cccHHHHHHHHHHHhCCC----
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG----------------LQGHKEWLAEVNFLGDLV----  193 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~----------------~~~~~~~~~E~~il~~l~----  193 (511)
                      ...||+|+.-.||.--.            .....||++....                .....+..+|+.....+.    
T Consensus         6 ~~~i~~G~~R~cy~HP~------------dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~   73 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPD------------DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRG   73 (199)
T ss_pred             CcccccCCCceEEECCC------------CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccC
Confidence            45799999999996321            2256789987765                122345666776665555    


Q ss_pred             --CCCcceEeeEEEeCCeEEEEEEccCC--C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc
Q 010432          194 --HLNLVKLIGYCIEDDQRLLVYEFMPR--G----SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF  265 (511)
Q Consensus       194 --H~nIv~l~~~~~~~~~~~lv~E~~~~--g----~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL  265 (511)
                        +.+|.+++|+..++...-+|+|.+.+  |    +|.+++...  .++. .....+.   .-..||-.++   |+.+||
T Consensus        74 ~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~~~~~L~---~f~~~l~~~~---Iv~~dl  144 (199)
T PF10707_consen   74 VDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG--GLTE-ELRQALD---EFKRYLLDHH---IVIRDL  144 (199)
T ss_pred             CcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC--CccH-HHHHHHH---HHHHHHHHcC---CeecCC
Confidence              88999999999999888999998643  2    688888433  3444 3333333   3345666767   999999


Q ss_pred             CCCcEEeccc
Q 010432          266 KTSNILLDAV  275 (511)
Q Consensus       266 Kp~NILl~~~  275 (511)
                      +|.||++...
T Consensus       145 ~~~NIv~~~~  154 (199)
T PF10707_consen  145 NPHNIVVQRR  154 (199)
T ss_pred             CcccEEEEec
Confidence            9999999864

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.14  E-value=2e-05  Score=74.59  Aligned_cols=77  Identities=14%  Similarity=0.220  Sum_probs=54.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC--CcceEeeEEEe---CCe
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL--NLVKLIGYCIE---DDQ  209 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~--nIv~l~~~~~~---~~~  209 (511)
                      +.|+.|..+.||+.....           ..+++|.....  .....+.+|+.+++.|...  .+.+++.+...   ...
T Consensus         3 ~~l~~G~~n~~~~v~~~~-----------~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~   69 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-----------GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGF   69 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-----------SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSE
T ss_pred             ccCCCCCeeeEEEEEECC-----------cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccccccc
Confidence            568999999999998642           48999997654  3345677898888887433  35677765433   345


Q ss_pred             EEEEEEccCCCCHHH
Q 010432          210 RLLVYEFMPRGSLEN  224 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~  224 (511)
                      .+++|++++|..+..
T Consensus        70 ~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   70 PYLLMEYIPGRPLDD   84 (239)
T ss_dssp             EEEEEEEESSEEHHH
T ss_pred             ceEEEEEeccccccc
Confidence            789999999887766

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.98  E-value=3.1e-05  Score=71.09  Aligned_cols=101  Identities=29%  Similarity=0.274  Sum_probs=78.9

Q ss_pred             HHHHHHhCCCC-CCcceEeeEEEeCCeEEEEEEccCCCCHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 010432          184 AEVNFLGDLVH-LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF--RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV  260 (511)
Q Consensus       184 ~E~~il~~l~H-~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~--~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~i  260 (511)
                      .|.-+|..+.+ +++.+++|+|    ..++|.||...+++.....  ..-...+|..+.+|+.+++..+.+|+..-...+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            58888888866 6999999998    2478999997765542100  111256899999999999999999987544458


Q ss_pred             EecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCccc
Q 010432          261 IYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       261 iHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                      .-.|++++|+-++                         +++.+|++|...+..
T Consensus        84 ~lcDv~~~nfgv~-------------------------~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   84 YLCDVSPDNFGVN-------------------------DDGRLKLIDLDDVFV  111 (188)
T ss_pred             EEeecchHHeEEe-------------------------CCCcEEEEechhcch
Confidence            8899999999998                         477899999887754

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.96  E-value=6.1e-05  Score=66.89  Aligned_cols=129  Identities=19%  Similarity=0.192  Sum_probs=87.2

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcc-eEeeEEEeCCe
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLV-KLIGYCIEDDQ  209 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv-~l~~~~~~~~~  209 (511)
                      .++.+.||+|.+|.||+|.+.           |..+|+|+-+.+..  ...+..|+++|..+.-.++. ++|.|.    .
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~-----------~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg----~   86 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR-----------GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYG----E   86 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc-----------CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEec----h
Confidence            344567999999999999984           56899998876643  35688999999999776664 444443    2


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC--CcEEeccccccccCCcceee
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT--SNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp--~NILl~~~~~~~~~~~~~~~  287 (511)
                      .++.|||+.|-.|.++-..    .+.....    .+++.---|-..|   |-|..|.-  .||++.              
T Consensus        87 ~~i~me~i~G~~L~~~~~~----~~rk~l~----~vlE~a~~LD~~G---I~H~El~~~~k~vlv~--------------  141 (201)
T COG2112          87 DFIRMEYIDGRPLGKLEIG----GDRKHLL----RVLEKAYKLDRLG---IEHGELSRPWKNVLVN--------------  141 (201)
T ss_pred             hhhhhhhhcCcchhhhhhc----ccHHHHH----HHHHHHHHHHHhc---cchhhhcCCceeEEec--------------
Confidence            3566999988788776531    1222222    3333323333445   88887764  466664              


Q ss_pred             eccccccccccccCceeeecCCCccc
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                                  +..+.|+||--|+.
T Consensus       142 ------------~~~~~iIDFd~At~  155 (201)
T COG2112         142 ------------DRDVYIIDFDSATF  155 (201)
T ss_pred             ------------CCcEEEEEccchhh
Confidence                        44799999998874

>PLN02876 acyl-CoA dehydrogenase

Probab=97.92  E-value=0.00013  Score=82.42  Aligned_cols=81  Identities=17%  Similarity=0.209  Sum_probs=56.7

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCC-CCCc--ceEeeEEEeC--
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLV-HLNL--VKLIGYCIED--  207 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~-H~nI--v~l~~~~~~~--  207 (511)
                      ++.|+.|.+..+|+......+       ....+++|+...... .....+.+|+++|+.|. |.+|  .+++.+|.+.  
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~-------~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v  115 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGG-------SVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASV  115 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCC-------cceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCc
Confidence            457899999999998764311       113577887654322 23356889999999995 6654  7888877654  


Q ss_pred             -CeEEEEEEccCCCC
Q 010432          208 -DQRLLVYEFMPRGS  221 (511)
Q Consensus       208 -~~~~lv~E~~~~g~  221 (511)
                       +..|+||||++|-.
T Consensus       116 ~G~~flVME~v~G~~  130 (822)
T PLN02876        116 IGTAFYIMEYLEGRI  130 (822)
T ss_pred             CCCceEEEEecCCcc
Confidence             45789999998754

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.86  E-value=0.0001  Score=70.33  Aligned_cols=73  Identities=15%  Similarity=0.136  Sum_probs=45.4

Q ss_pred             CccccCCCc-eEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC---CcceEeeEEEeC---
Q 010432          135 SLLGEGGFG-CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL---NLVKLIGYCIED---  207 (511)
Q Consensus       135 ~~lG~G~fg-~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~---nIv~l~~~~~~~---  207 (511)
                      +.|+.|+.. .||+..              ..+++|......  ....+.+|+++|..|...   .+.++++.....   
T Consensus         3 ~~~~~gG~~n~vy~~~--------------~~~VlR~~~~~~--~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~   66 (235)
T cd05155           3 EPVDSGGTDNATFRLG--------------DDMSVRLPSAAG--YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGY   66 (235)
T ss_pred             eeccCCCcccceEEcC--------------CceEEEcCCccc--hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCC
Confidence            467877776 599751              246778755422  234688899999877531   344445443322   


Q ss_pred             CeEEEEEEccCCCCHH
Q 010432          208 DQRLLVYEFMPRGSLE  223 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~  223 (511)
                      ...+++|++++|.++.
T Consensus        67 ~~~~~l~~~i~G~~l~   82 (235)
T cd05155          67 PWPWSVYRWLEGETAT   82 (235)
T ss_pred             CcceEEEEeecCCCCC
Confidence            2348899999886653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=97.85  E-value=0.00028  Score=69.83  Aligned_cols=77  Identities=12%  Similarity=0.060  Sum_probs=55.1

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC---CCcceEeeEEEe---
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH---LNLVKLIGYCIE---  206 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H---~nIv~l~~~~~~---  206 (511)
                      -.+.||.|..+.||+....+          + .+.+|..+...  ....+..|...|+.|.-   ..+.++++++..   
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~----------~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~   84 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQ----------G-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS   84 (297)
T ss_pred             eeeecCCccceeEEEEEcCC----------C-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc
Confidence            34579999999999986422          2 46777754311  22468899999988843   467888887754   


Q ss_pred             CCeEEEEEEccCCCCH
Q 010432          207 DDQRLLVYEFMPRGSL  222 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L  222 (511)
                      .+..+||||+++++++
T Consensus        85 ~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         85 PGPDVLLLERLRGVSV  100 (297)
T ss_pred             CCCeEEEEeccCCEec
Confidence            3568999999988754

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.83  E-value=5.5e-05  Score=84.04  Aligned_cols=198  Identities=20%  Similarity=0.201  Sum_probs=131.0

Q ss_pred             HHHHHHHhCCCCCCcceEeeEEEeCCeE----EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 010432          183 LAEVNFLGDLVHLNLVKLIGYCIEDDQR----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER  258 (511)
Q Consensus       183 ~~E~~il~~l~H~nIv~l~~~~~~~~~~----~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~  258 (511)
                      ..|...+.++.|+|++.++.|.......    .+..|+|..-++...+.. -..++....+.+..++..||.|+|+..  
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~--  306 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLS--  306 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhc--
Confidence            3467778888999999999987764332    244588888888887743 457888999999999999999999864  


Q ss_pred             CeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeee--cCCCcccCCCCCcceeeeeccccccccCCc
Q 010432          259 PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS--DFGLAKDGPEGDKTHVSTRVMGTYGYAAPE  336 (511)
Q Consensus       259 ~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE  336 (511)
                       ..|.-|-.+-..-.                      .......+.++  ||+.++.........   ...-+..|.++|
T Consensus       307 -l~~v~L~~s~~~~~----------------------~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e  360 (1351)
T KOG1035|consen  307 -LEHVVLSASSSKES----------------------TVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADE  360 (1351)
T ss_pred             -cceeEEeccccccc----------------------ccCccceeecchhhhcccccCCCcccch---hhcCcccccccc
Confidence             44433332211110                      00124445555  888888766543321   123455678888


Q ss_pred             ccccCCCCcc--ccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHH
Q 010432          337 YVMTGHLTSR--SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL  414 (511)
Q Consensus       337 ~~~~~~~~~~--~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  414 (511)
                      ......+..+  .|+|.+|..+..+..|..+-.....                   ...+++    ..+    .....++
T Consensus       361 ~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~-------------------~~~~l~----~~~----~~~~~d~  413 (1351)
T KOG1035|consen  361 DLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV-------------------PVSLLD----VLS----TSELLDA  413 (1351)
T ss_pred             ccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc-------------------hhhhhc----ccc----chhhhhh
Confidence            7776665554  7999999999999987654321100                   000111    000    1146788


Q ss_pred             HHHhcccCCCCCCCHHHHHHHh
Q 010432          415 AAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..+|+..++++|+++.+++.+.
T Consensus       414 ~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  414 LPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhhcchhhhhccchhhhhhch
Confidence            9999999999999999998764

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.52  E-value=0.00086  Score=66.29  Aligned_cols=75  Identities=11%  Similarity=0.002  Sum_probs=48.6

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC--CcceEeeE------EE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL--NLVKLIGY------CI  205 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~--nIv~l~~~------~~  205 (511)
                      ++.|..|....+|+....           +..+++|+....   .......|+.++..|.+.  .+.+++..      ..
T Consensus        19 i~~i~~G~~n~~y~v~~~-----------~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~   84 (296)
T cd05153          19 FEGISAGIENTNYFVTTD-----------SGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSE   84 (296)
T ss_pred             eecccCccccceEEEEeC-----------CCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeee
Confidence            456778888899987642           336889987642   234566788888777432  24444431      22


Q ss_pred             eCCeEEEEEEccCCCCH
Q 010432          206 EDDQRLLVYEFMPRGSL  222 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L  222 (511)
                      .++..++|++|++|..+
T Consensus        85 ~~~~~~~l~~~i~G~~~  101 (296)
T cd05153          85 LAGKPAALVEFLAGEHL  101 (296)
T ss_pred             eCCceEEEEEeCCCCCC
Confidence            34567899999988664

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.46  E-value=0.0013  Score=62.58  Aligned_cols=75  Identities=20%  Similarity=0.112  Sum_probs=46.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC-CCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH-LNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H-~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.|..|-...||+.....+        .+..|++|+....... .-...+|+.++..+.. .-..++++.+.  +  .+|
T Consensus         4 ~~l~gG~tN~~~~v~~~~~--------~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l   70 (235)
T cd05157           4 KRFTGGITNKLVKVSNKED--------NQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLI   70 (235)
T ss_pred             EEcCCcccceEEEEEcCCC--------CCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEE
Confidence            4577788889999864310        1357889977543221 1123478888888843 33445554432  2  479


Q ss_pred             EEccCCCCH
Q 010432          214 YEFMPRGSL  222 (511)
Q Consensus       214 ~E~~~~g~L  222 (511)
                      |||++|-+|
T Consensus        71 ~e~i~G~~l   79 (235)
T cd05157          71 YEFIPGRTL   79 (235)
T ss_pred             EEeeCCCcC
Confidence            999988665

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.42  E-value=0.00099  Score=64.42  Aligned_cols=72  Identities=17%  Similarity=0.089  Sum_probs=45.1

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~lv~  214 (511)
                      .+..|-...+|+...           .+..+++|+.......-.-...+|..+++.+....+ .+++...  .  -++||
T Consensus         3 ~~~~G~tn~~y~~~~-----------~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~   67 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-----------PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLV   67 (256)
T ss_pred             cCCCcCcCCeEEEEe-----------CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEE
Confidence            355688889998863           355788887654322110134678899988854333 3444433  2  36899


Q ss_pred             EccCCCCH
Q 010432          215 EFMPRGSL  222 (511)
Q Consensus       215 E~~~~g~L  222 (511)
                      ||++|..+
T Consensus        68 e~i~G~~~   75 (256)
T TIGR02721        68 EWLEGEVI   75 (256)
T ss_pred             EeccCccc
Confidence            99988654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.36  E-value=0.0064  Score=62.31  Aligned_cols=76  Identities=20%  Similarity=0.133  Sum_probs=52.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC------C-cccHHHHHHHHHHHhCCC---CCCcceEeeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD------G-LQGHKEWLAEVNFLGDLV---HLNLVKLIGYC  204 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~------~-~~~~~~~~~E~~il~~l~---H~nIv~l~~~~  204 (511)
                      +.||.|.+..||++....         .++.|+||.-...      . ....+++..|.+.|..+.   -.++.+++.+ 
T Consensus        32 ~elggGn~N~VyrV~~~~---------g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~-  101 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTE---------GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY-  101 (401)
T ss_pred             eEcCCCceEEEEEEEeCC---------CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE-
Confidence            468999999999998753         2247999985321      1 123456777888888762   3457777776 


Q ss_pred             EeCCeEEEEEEccCCCC
Q 010432          205 IEDDQRLLVYEFMPRGS  221 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~  221 (511)
                       +.+..++||||+++..
T Consensus       102 -D~~~~~lVME~L~~~~  117 (401)
T PRK09550        102 -DEELAVTVMEDLSDHK  117 (401)
T ss_pred             -CCCCCEEEEecCCCcc
Confidence             4456789999997643

>PRK05231 homoserine kinase; Provisional

Probab=97.34  E-value=0.0075  Score=60.29  Aligned_cols=74  Identities=8%  Similarity=-0.001  Sum_probs=42.8

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC--CCcceEee------EEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH--LNLVKLIG------YCI  205 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--~nIv~l~~------~~~  205 (511)
                      .+.|+.|....+|+.....          | .+++|++...   ....+..|+.++..|..  -.+.+.+.      +..
T Consensus        27 ~~~l~~G~~n~~y~v~t~~----------g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~   92 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTTQ----------G-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGE   92 (319)
T ss_pred             cchhccccccceEEEEeCC----------C-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeee
Confidence            3457778778999886432          3 6889987621   12334445555555521  12333332      122


Q ss_pred             eCCeEEEEEEccCCCC
Q 010432          206 EDDQRLLVYEFMPRGS  221 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~  221 (511)
                      ..+..+++|||++|..
T Consensus        93 ~~g~~~~l~~~l~G~~  108 (319)
T PRK05231         93 LAGKPAAIVTFLEGKW  108 (319)
T ss_pred             eCCEEEEEEEecCCCC
Confidence            3556789999998864

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.28  E-value=0.0034  Score=62.50  Aligned_cols=75  Identities=12%  Similarity=-0.001  Sum_probs=45.4

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC--CcceEeeE------EE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL--NLVKLIGY------CI  205 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~--nIv~l~~~------~~  205 (511)
                      ++.|+.|....||+....          .| .+++|+.....  .......|++++..|...  .+.+++..      ..
T Consensus        27 i~~~~~G~~n~~y~v~t~----------~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~   93 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTD----------VG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLST   93 (307)
T ss_pred             ccccCCccccceEEEEeC----------CC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehh
Confidence            456777877899988642          23 57789875432  123455677777766322  23444331      11


Q ss_pred             eCCeEEEEEEccCCCC
Q 010432          206 EDDQRLLVYEFMPRGS  221 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~  221 (511)
                      ..+..+++|||++|..
T Consensus        94 ~~g~~~~l~e~i~G~~  109 (307)
T TIGR00938        94 LAGKPACLVEFLQGLS  109 (307)
T ss_pred             cCCeEEEEEEeCCCCC
Confidence            2456789999998854

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.21  E-value=2.7e-05  Score=88.21  Aligned_cols=158  Identities=15%  Similarity=0.007  Sum_probs=114.0

Q ss_pred             HHHHHHHHhCCCCCCcceEeeEEEe--CCeEEEEEEccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCC
Q 010432          182 WLAEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLHEEA  256 (511)
Q Consensus       182 ~~~E~~il~~l~H~nIv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~gL~yLH~~~  256 (511)
                      .+.|.+.++...|++++..+.-...  ....+.+++||.+|++.+.|.+..   ..+....+.....+.+.+..-+|+..
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence            4456666777889998877654432  345689999999999999986432   23333444444444466666666432


Q ss_pred             --CCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccC
Q 010432          257 --ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA  334 (511)
Q Consensus       257 --~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~a  334 (511)
                        ..-.+|++||+-|.+|..                         +..+|++++|+.+......  .......+++.|++
T Consensus      1356 nlg~T~v~~~Lkf~lpmIVt-------------------------ny~v~~gk~gLdKIknp~~--sf~Gl~l~sp~~v~ 1408 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVT-------------------------NYNVKLGKGGLDKIKNPVL--SFFGLELCSPIYVL 1408 (2724)
T ss_pred             cCCccchhhhhhhhccceec-------------------------CCcccccccccccccCchH--hhhhhhhCCHHHHH
Confidence              233689999999999984                         7779999999999432211  12334578889999


Q ss_pred             CcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          335 PEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       335 PE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                      |++...-.++.++|+|..|+-+|++.-|..+|
T Consensus      1409 qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1409 QLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            99888888999999999999999999887766

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.21  E-value=0.0019  Score=64.01  Aligned_cols=144  Identities=16%  Similarity=0.106  Sum_probs=91.5

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--cc--------------------HHH----HHHH
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QG--------------------HKE----WLAE  185 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~--------------------~~~----~~~E  185 (511)
                      .+..+|..|--+.||.|.-.          .|..+|||+++..-+  .+                    ++.    ...|
T Consensus       147 ~inGCiSTGKEANVYHat~~----------dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE  216 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEE----------DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKE  216 (520)
T ss_pred             ecccccccCccceeEeeecC----------CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHH
Confidence            34457889999999998654          477899999874311  00                    011    2357


Q ss_pred             HHHHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc
Q 010432          186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF  265 (511)
Q Consensus       186 ~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL  265 (511)
                      ++-|.+|+...|..---...  ....|||+|+ |.+=.-.-.-+...++...+..+-.|++.-|.-|-..+  ++||.||
T Consensus       217 ~RNLkRl~~aGIP~PePIlL--k~hVLVM~Fl-Grdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADL  291 (520)
T KOG2270|consen  217 MRNLKRLNNAGIPCPEPILL--KNHVLVMEFL-GRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADL  291 (520)
T ss_pred             HHHHHHHHhcCCCCCCceee--ecceEeeeec-cCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccch
Confidence            77787775444321111111  1247999999 43311110112234666677777778888887775543  2999999


Q ss_pred             CCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCC
Q 010432          266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE  316 (511)
Q Consensus       266 Kp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~  316 (511)
                      .-=|+|+-                          ++.+.|+|-+-+.....
T Consensus       292 SEfN~Lyh--------------------------dG~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  292 SEFNLLYH--------------------------DGKLYIIDVSQSVEHDH  316 (520)
T ss_pred             hhhhheEE--------------------------CCEEEEEEccccccCCC
Confidence            99999986                          78899999888765433

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.07  E-value=0.0041  Score=61.65  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=48.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~lv  213 (511)
                      +.|..|-...||+........   .+..+..|++|+...... ......+|+.++..+....+ .++++++. +   .+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~---~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDA---LSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCccc---ccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cch
Confidence            345667777899887532110   122357899999765432 22345678888888743333 45565553 2   368


Q ss_pred             EEccCCCCHH
Q 010432          214 YEFMPRGSLE  223 (511)
Q Consensus       214 ~E~~~~g~L~  223 (511)
                      +||++|..+.
T Consensus        76 ~e~i~G~~l~   85 (302)
T cd05156          76 EEFIPSRTLT   85 (302)
T ss_pred             hheeCCCcCC
Confidence            9999886653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.87  E-value=0.0015  Score=67.23  Aligned_cols=49  Identities=24%  Similarity=0.342  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHhCCCCCCcceEeeEEEeC-CeEEEEEEccCCCCHHHHHhhC
Q 010432          180 KEWLAEVNFLGDLVHLNLVKLIGYCIED-DQRLLVYEFMPRGSLENHLFRR  229 (511)
Q Consensus       180 ~~~~~E~~il~~l~H~nIv~l~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~  229 (511)
                      .+++-...+++.+.|+|...++++.... ....+|||++ +-+|++.+..+
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~   76 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG   76 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence            4556677889999999999999877653 3467899999 67999988654

>PLN02236 choline kinase

Probab=96.77  E-value=0.014  Score=59.00  Aligned_cols=79  Identities=16%  Similarity=0.039  Sum_probs=48.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcc-eEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLV-KLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv-~l~~~~~~~~~~~lv  213 (511)
                      ..|-.|-.-.+|++.......     ..++.|++|+........ -...+|+.+++.+...++. ++++.+..+    .|
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~-----~~~~~~v~Ri~g~~t~~~-idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v  111 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEG-----NLGRKVLVRIYGEGVELF-FDRDDEIRTFECMSRHGQGPRLLGRFPNG----RV  111 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCC-----CCCCeEEEEEccCCCCee-echHHHHHHHHHHHHcCCCCceEEEECCc----eE
Confidence            345557788999987543111     134689999886543221 1235788888888544443 556655322    58


Q ss_pred             EEccCCCCHH
Q 010432          214 YEFMPRGSLE  223 (511)
Q Consensus       214 ~E~~~~g~L~  223 (511)
                      +||+++.+|.
T Consensus       112 ~efi~g~~l~  121 (344)
T PLN02236        112 EEFIHARTLS  121 (344)
T ss_pred             EEeeCCCCCC
Confidence            9999776653

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.76  E-value=0.015  Score=57.49  Aligned_cols=57  Identities=16%  Similarity=0.281  Sum_probs=36.2

Q ss_pred             CcEEEEEEecC--CCcccHHHHHHHHHHHhCCCC--CCcceEeeEEEeCC--eEEEEEEccCCC
Q 010432          163 GLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVH--LNLVKLIGYCIEDD--QRLLVYEFMPRG  220 (511)
Q Consensus       163 ~~~vAvK~~~~--~~~~~~~~~~~E~~il~~l~H--~nIv~l~~~~~~~~--~~~lv~E~~~~g  220 (511)
                      ++.+++. ...  ..........+|+.+|+.+.-  .-+...+++|..+.  ..|.||+|++|.
T Consensus        48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe  110 (321)
T COG3173          48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGE  110 (321)
T ss_pred             CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecce
Confidence            5678887 332  122233456678888887743  23445667776655  669999999883

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.53  E-value=0.0027  Score=61.93  Aligned_cols=136  Identities=17%  Similarity=0.086  Sum_probs=88.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----------------------cHHHHHHHHH
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----------------------GHKEWLAEVN  187 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----------------------~~~~~~~E~~  187 (511)
                      -+.+.+.||-|--+.||.+-+..          |...++|.-+.....                      ++-...+|+.
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~----------G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfa  162 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEE----------GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFA  162 (465)
T ss_pred             hhhhccccccccccceEEEecCC----------CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHH
Confidence            36788899999999999997753          678888854321100                      0112457888


Q ss_pred             HHhCCC-CC-CcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccc
Q 010432          188 FLGDLV-HL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF  265 (511)
Q Consensus       188 il~~l~-H~-nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDL  265 (511)
                      .|+.|. |- -+.+.++    .+..++|||++.|-.|.+.-+-    .+...+.   ..+..-+--|-.+|   +||+|.
T Consensus       163 fmkaL~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly---~~lm~~Iv~la~~G---lIHgDF  228 (465)
T KOG2268|consen  163 FMKALYERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHV----EDPPTLY---DDLMGLIVRLANHG---LIHGDF  228 (465)
T ss_pred             HHHHHHHcCCCCCCccc----ccceeeHHHhhcccceeeeeec----CChHHHH---HHHHHHHHHHHHcC---ceeccc
Confidence            888883 32 2344444    3457899999988887764321    1222222   22222333455567   999999


Q ss_pred             CCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccC
Q 010432          266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       266 Kp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                      .-=||++.                         ++..++++||--....
T Consensus       229 NEFNimv~-------------------------dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  229 NEFNIMVK-------------------------DDDKIVVIDFPQMVST  252 (465)
T ss_pred             chheeEEe-------------------------cCCCEEEeechHhhcc
Confidence            99999998                         4778999999665443

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.36  E-value=0.012  Score=59.27  Aligned_cols=133  Identities=17%  Similarity=0.176  Sum_probs=75.1

Q ss_pred             CccccCCCceEEEEEEcC------CCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeE----
Q 010432          135 SLLGEGGFGCVFKGWIEE------NGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGY----  203 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~------~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~----  203 (511)
                      ..||.|+-+.||+|..+.      ++...+.+.+.+.||||+...+...   .+.+.+.||.-. +-+|+|.-+.|    
T Consensus       195 ~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~---~ir~Dl~Il~f~Akl~~~vP~l~wL~l~  271 (565)
T KOG1236|consen  195 EPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEK---QIRLDLGILGFGAKLINNVPDLSWLSLP  271 (565)
T ss_pred             cccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHH---HHHHHHHHHhhhhhhhhhcCccccccCc
Confidence            479999999999998763      2222234556788999999865422   122222222211 00111110000    


Q ss_pred             -----------------------------E-------------EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHH
Q 010432          204 -----------------------------C-------------IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI  241 (511)
Q Consensus       204 -----------------------------~-------------~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i  241 (511)
                                                   |             .-.....|+-+|..|-++..++....  .+++...++
T Consensus       272 ~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~--~pe~l~kkv  349 (565)
T KOG1236|consen  272 LEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKS--QPEALVKKV  349 (565)
T ss_pred             chHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhccc--ChHHHHHHH
Confidence                                         0             00112356667888888888885443  344555555


Q ss_pred             HHHHHHHHHHH-hcCCCCCeEecccCCCcEEeccc
Q 010432          242 ALGAAKGLAFL-HEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       242 ~~qi~~gL~yL-H~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      +.--+.||.-+ --.+   ++|.|+.|.||++...
T Consensus       350 a~lg~~AllkMl~vDN---FvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  350 AKLGVNALLKMLIVDN---FVHADLHPGNVLIRFN  381 (565)
T ss_pred             HHHHHHHHHHHHHhhc---ceecccCCCcEEEEec
Confidence            54444554322 2234   9999999999999753

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.09  E-value=0.1  Score=51.72  Aligned_cols=64  Identities=14%  Similarity=0.102  Sum_probs=37.6

Q ss_pred             eEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC--CcceEeeE------EEeCCeEEEEEE
Q 010432          144 CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL--NLVKLIGY------CIEDDQRLLVYE  215 (511)
Q Consensus       144 ~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~--nIv~l~~~------~~~~~~~~lv~E  215 (511)
                      .||+....           +..+++|++...    ...+..|+.++..|...  .+++++..      ...++..++|+|
T Consensus        11 ~v~~v~t~-----------~g~~~LK~~~~~----~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~   75 (313)
T TIGR02906        11 NVYKVETD-----------SGNKCLKKINYP----PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTE   75 (313)
T ss_pred             cEEEEEeC-----------CCCeEEEEcCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEeh
Confidence            48887642           225889988532    23445566666666322  33444322      223567899999


Q ss_pred             ccCCCCH
Q 010432          216 FMPRGSL  222 (511)
Q Consensus       216 ~~~~g~L  222 (511)
                      |++|..+
T Consensus        76 ~i~G~~~   82 (313)
T TIGR02906        76 WIEGREC   82 (313)
T ss_pred             hccCcCC
Confidence            9988543

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=95.97  E-value=0.11  Score=52.21  Aligned_cols=80  Identities=15%  Similarity=0.088  Sum_probs=49.2

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC------C-cccHHHHHHHHHHHhCCC--CC-CcceEeeEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD------G-LQGHKEWLAEVNFLGDLV--HL-NLVKLIGYCI  205 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~------~-~~~~~~~~~E~~il~~l~--H~-nIv~l~~~~~  205 (511)
                      .||.|....||++....         .++.|+||.-...      . ....++...|..+|+...  -| .+.++|.+  
T Consensus         2 EigdGnlN~VfrV~~~~---------g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--   70 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQE---------GDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--   70 (370)
T ss_pred             cCCCCceEEEEEEEcCC---------CCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--
Confidence            47999999999998632         2357999974311      1 122345556778876652  23 45556543  


Q ss_pred             eCCeEEEEEEccCCC-CHHHHH
Q 010432          206 EDDQRLLVYEFMPRG-SLENHL  226 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g-~L~~~l  226 (511)
                      +++...+|||+++.. .|.+.|
T Consensus        71 D~e~~~~vMEdL~~~~ilR~~L   92 (370)
T TIGR01767        71 DTEMAVTVMEDLSHHKIARKGL   92 (370)
T ss_pred             ccccceehHhhCccchHHHHHH
Confidence            455667999999553 343444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.64  E-value=0.099  Score=51.12  Aligned_cols=29  Identities=14%  Similarity=0.074  Sum_probs=19.8

Q ss_pred             CcEEEEEEecCCCcccHHHHHHHHHHHhCCC
Q 010432          163 GLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV  193 (511)
Q Consensus       163 ~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~  193 (511)
                      |..+++|.-+...  ....+.+|+++|+.|.
T Consensus        35 g~~~VlR~p~~~~--~~~~l~rE~~vL~~L~   63 (276)
T cd05152          35 GVPWVLRIPRRPD--VSERAAAEKRVLALVR   63 (276)
T ss_pred             CCeEEEEecCCHH--HHHHHHHHHHHHHHHH
Confidence            5678888765322  2345788999998884

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.58  E-value=0.17  Score=51.97  Aligned_cols=73  Identities=10%  Similarity=0.021  Sum_probs=48.5

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-------ccHHHHHHHHHHHhCCC---CCCcceEeeE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-------QGHKEWLAEVNFLGDLV---HLNLVKLIGY  203 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~E~~il~~l~---H~nIv~l~~~  203 (511)
                      .+.||-|....||+....           +..|+||.-.....       -...+-..|+..|+.+.   ..++.+++.+
T Consensus        37 ~~eiggGn~N~VyrV~~~-----------~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~  105 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-----------SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHF  105 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-----------CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEE
Confidence            456899999999998752           23588987652111       12233445677776553   3578888887


Q ss_pred             EEeCCeEEEEEEccCC
Q 010432          204 CIEDDQRLLVYEFMPR  219 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~  219 (511)
                      +.  +..+++|||+++
T Consensus       106 de--d~~vlvME~L~~  119 (418)
T PLN02756        106 DR--TMALIGMRYLEP  119 (418)
T ss_pred             CC--CCCEEEEeecCC
Confidence            75  456889999976

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.43  E-value=0.11  Score=51.00  Aligned_cols=73  Identities=22%  Similarity=0.273  Sum_probs=45.8

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC---CCCCcceEeeEEEeCCeE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL---VHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l---~H~nIv~l~~~~~~~~~~  210 (511)
                      .+.|+-|....+|+...           .+..+.||+-....   ...|..|..-|+.|   .--.+.+.+++....+..
T Consensus        22 ~~~v~GG~i~~a~~~~~-----------~~~~~FvK~~~~~~---~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~   87 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLDT-----------DGGSYFVKVNSESG---RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA   87 (288)
T ss_dssp             EEEE--SSSSEEEEEET-----------TS-EEEEEEEEGGG---CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC
T ss_pred             eEecCCCChhheEEEEC-----------CCccEEEEecChhh---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc
Confidence            34688899999998762           46689999887322   24567788877777   344577888888777778


Q ss_pred             EEEEEccCCC
Q 010432          211 LLVYEFMPRG  220 (511)
Q Consensus       211 ~lv~E~~~~g  220 (511)
                      ||||||++.+
T Consensus        88 fLlle~l~~~   97 (288)
T PF03881_consen   88 FLLLEFLEMG   97 (288)
T ss_dssp             EEEEE-----
T ss_pred             eEEEEeecCC
Confidence            9999999776

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=95.40  E-value=0.11  Score=52.22  Aligned_cols=76  Identities=17%  Similarity=0.234  Sum_probs=45.4

Q ss_pred             ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEEEE
Q 010432          136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLLVY  214 (511)
Q Consensus       136 ~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~lv~  214 (511)
                      .|..|=.-.+|+.......      ..+..|++|+....... .-.-.+|..+++.+..-++ .++++++. +.   +|.
T Consensus        21 ~l~gGlTN~~~~v~~~~~~------~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~   89 (330)
T PLN02421         21 RISGGITNLLLKVSVKEEN------GNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQ   89 (330)
T ss_pred             EeCCcccceEEEEEecCCC------CCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eee
Confidence            4544777789988654211      02347889987654321 1123478888888865444 35666552 22   589


Q ss_pred             EccCCCCH
Q 010432          215 EFMPRGSL  222 (511)
Q Consensus       215 E~~~~g~L  222 (511)
                      +|+++-.|
T Consensus        90 ~fi~g~~l   97 (330)
T PLN02421         90 SFINARTL   97 (330)
T ss_pred             hhhcCCCC
Confidence            99977654

>PRK12396 5-methylribose kinase; Reviewed

Probab=95.10  E-value=0.12  Score=52.84  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=48.7

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC-----C-cccHHHHHHHHHHHhCCC--CC-CcceEeeEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-----G-LQGHKEWLAEVNFLGDLV--HL-NLVKLIGYC  204 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~-----~-~~~~~~~~~E~~il~~l~--H~-nIv~l~~~~  204 (511)
                      .+.||-|.-..||++.+..         .+..|+||.-...     . .-..++...|.++|+.+.  -| .+.++|.+ 
T Consensus        34 ~~eigdGnlN~VfrV~~~~---------~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-  103 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQ---------KNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-  103 (409)
T ss_pred             eeEcCCCceEEEEEEeeCC---------CCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-
Confidence            4578999999999998732         1347888864321     1 123455667888887662  23 45566643 


Q ss_pred             EeCCeEEEEEEccCC
Q 010432          205 IEDDQRLLVYEFMPR  219 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~  219 (511)
                       +.+...+|||+++.
T Consensus       104 -D~e~~~~vMEdL~~  117 (409)
T PRK12396        104 -DSVMNCCVMEDLSD  117 (409)
T ss_pred             -CcHHhhHHHHhCcc
Confidence             45556789999854

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.77  E-value=0.14  Score=47.62  Aligned_cols=136  Identities=15%  Similarity=0.108  Sum_probs=80.4

Q ss_pred             EEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHH
Q 010432          166 VAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG  244 (511)
Q Consensus       166 vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~q  244 (511)
                      ..+|.+..-... ...-|..+.++++++.  .|++|..-  ..-.+-+++|+|.....          ..    ..++..
T Consensus        88 L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i----------~~----~N~i~a  149 (308)
T PF07387_consen   88 LFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI----------NF----SNFITA  149 (308)
T ss_pred             hhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc----------ch----hHHHHH
Confidence            445655543332 3345678899998874  57777731  23345599999943211          11    111111


Q ss_pred             HHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeee
Q 010432          245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVST  324 (511)
Q Consensus       245 i~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~  324 (511)
                      =+.+|.-.|+.. .+.+|+|..|+||+-+                         ..+.+||.|=+.--.           
T Consensus       150 gi~~L~~fH~~~-~~~lHGD~np~NiM~D-------------------------~~G~lKlVDP~~Ll~-----------  192 (308)
T PF07387_consen  150 GIKDLMDFHSEN-QHCLHGDCNPDNIMCD-------------------------KFGYLKLVDPVCLLE-----------  192 (308)
T ss_pred             hHHHHHHhhccC-CCeecCCCChhheeec-------------------------CCCCEEecChhhhhh-----------
Confidence            136678889654 4599999999999998                         477899998554321           


Q ss_pred             eccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          325 RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       325 ~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                         .+..|.--|   ....+.++.+-+|=.-++++...
T Consensus       193 ---~~V~~vN~~---Y~~lT~~aE~~~fv~s~l~~v~~  224 (308)
T PF07387_consen  193 ---NQVNMVNIE---YESLTQEAEVKVFVKSCLKLVEK  224 (308)
T ss_pred             ---heeeEEeee---ccccChHHHHHHHHHHHHHHHHH
Confidence               112233211   22346667776776666666653

The function of this family is unknown.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.60  E-value=0.46  Score=47.21  Aligned_cols=32  Identities=16%  Similarity=0.187  Sum_probs=26.2

Q ss_pred             CCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccC
Q 010432          258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       258 ~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                      ..++|+|+.+.|||++                         ++..+.|+||-.+...
T Consensus       196 ~~lcHgD~~~~Nvl~~-------------------------~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYD-------------------------ETRGGYFINFEKASFA  227 (309)
T ss_pred             eeeeCCCCcHHhEEEc-------------------------CCCCEEEEEhhhcccC
Confidence            3599999999999997                         3556889999887653

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.50  E-value=0.068  Score=49.89  Aligned_cols=54  Identities=20%  Similarity=0.156  Sum_probs=30.7

Q ss_pred             cEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEEEEEccCCCCH
Q 010432          164 LTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLLVYEFMPRGSL  222 (511)
Q Consensus       164 ~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~lv~E~~~~g~L  222 (511)
                      +.|+|++..... ...-....|..+++.+...++ .++++++  .+  .+|.||+++.+|
T Consensus         3 ~~~~~Ri~g~~t-~~~idr~~E~~~~~~l~~~g~~p~~~~~~--~~--g~v~e~i~g~~l   57 (211)
T PF01633_consen    3 EKYLVRIPGEGT-ENFIDRENENEALKLLSEAGLGPKIIYFF--EN--GRVEEFIEGRTL   57 (211)
T ss_dssp             SEEEEEEEESCG-CSHHHHHHHHHHHHHHHHTTSSS-EEEEE--TT--EEEEE--SSEE-
T ss_pred             CEEEEEeCCCCc-ccccCHHHHHHHHHHHHHcCCCCeEEEEc--CC--CcEEEEeccccc
Confidence            478899887662 223345678888888754444 4555544  22  257799966543

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.38  E-value=0.11  Score=51.84  Aligned_cols=73  Identities=19%  Similarity=0.179  Sum_probs=55.4

Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      .+.|++|++. |+.|.- +    ....+++++.++++.+.-++-+..+  .+.=||||.-.||||+              
T Consensus       299 ~y~yl~~kdh-gt~is~-i----k~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId--------------  356 (488)
T COG5072         299 LYLYLHFKDH-GTPISI-I----KADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID--------------  356 (488)
T ss_pred             eEEEEEEecC-Cceeee-e----ecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee--------------
Confidence            4567888876 656542 1    2345788889998887776666553  4589999999999997              


Q ss_pred             eccccccccccccCceeeecCCCcccC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                                  ++.|.|+||-+++.-
T Consensus       357 ------------~GnvtLIDfklsRl~  371 (488)
T COG5072         357 ------------EGNVTLIDFKLSRLS  371 (488)
T ss_pred             ------------cCceEEEEeeeeecc
Confidence                        788999999999953

>PRK11768 serine/threonine protein kinase; Provisional

Probab=93.66  E-value=1.6  Score=43.64  Aligned_cols=71  Identities=17%  Similarity=0.122  Sum_probs=41.5

Q ss_pred             CCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC--CCcceEe---e--EEEeCCeEEE
Q 010432          140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH--LNLVKLI---G--YCIEDDQRLL  212 (511)
Q Consensus       140 G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--~nIv~l~---~--~~~~~~~~~l  212 (511)
                      +.-..||+....          .+..+++|+.+... .....+..|+.++..|.-  -.++...   |  +...++..+.
T Consensus        36 s~eN~vy~v~~~----------~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~  104 (325)
T PRK11768         36 SYENRVYQFGDE----------DGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFA  104 (325)
T ss_pred             cccceEEEEecC----------CCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEE
Confidence            344578888653          35579999876432 233556678777776631  1122211   1  2223566788


Q ss_pred             EEEccCCCC
Q 010432          213 VYEFMPRGS  221 (511)
Q Consensus       213 v~E~~~~g~  221 (511)
                      |+++++|..
T Consensus       105 l~~~~~G~~  113 (325)
T PRK11768        105 LFPRRGGRA  113 (325)
T ss_pred             EEeeeCCCC
Confidence            999997753

>PRK06148 hypothetical protein; Provisional

Probab=92.76  E-value=1.6  Score=50.77  Aligned_cols=77  Identities=19%  Similarity=0.214  Sum_probs=42.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-------CCCCcceEe-e----
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-------VHLNLVKLI-G----  202 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-------~H~nIv~l~-~----  202 (511)
                      +.|+ |..-.+|+....          +|..+++|+.+....  ......|..+|..|       .-|.+++-. |    
T Consensus        31 ~~L~-s~~d~nf~v~~~----------~g~~yVLKi~~~~~~--~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~   97 (1013)
T PRK06148         31 TPLD-GERDLNFRLTTD----------DGADYILKIVNPSEP--RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLA   97 (1013)
T ss_pred             eecC-CcCCceEEEEeC----------CCCeEEEEEcCCccc--hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEE
Confidence            3564 456788887643          366899999986532  22333455555544       223333321 1    


Q ss_pred             EEEe-CC--eEEEEEEccCCCCHHH
Q 010432          203 YCIE-DD--QRLLVYEFMPRGSLEN  224 (511)
Q Consensus       203 ~~~~-~~--~~~lv~E~~~~g~L~~  224 (511)
                      .... ++  ..+-+|+|++|..|.+
T Consensus        98 ~v~~~~G~~~~vrLl~~l~G~~l~~  122 (1013)
T PRK06148         98 SAQDPDGEPRLLRLLSWLPGTPLAE  122 (1013)
T ss_pred             EeecCCCceEEEEEEeccCCCcHHh
Confidence            1111 12  4677899999876654

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.62  E-value=1.4  Score=41.36  Aligned_cols=58  Identities=26%  Similarity=0.322  Sum_probs=40.4

Q ss_pred             CcEEEEEEecCCCcccHHHHHHHHHHHhCC---CCCCcceEeeEEEeCCeEEEEEEccCCCCHH
Q 010432          163 GLTVAVKTLNHDGLQGHKEWLAEVNFLGDL---VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE  223 (511)
Q Consensus       163 ~~~vAvK~~~~~~~~~~~~~~~E~~il~~l---~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~  223 (511)
                      ...|-||+-...   ....|..|+.-|..|   +--++.+++.+-...++.||||||++-|.+.
T Consensus        39 ~~~~FvK~n~~~---~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          39 TDPFFVKCNQRE---QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             CcceEEEecchh---hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            346777764432   124466777666655   4456778888888889999999999886654

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.31  E-value=0.17  Score=49.74  Aligned_cols=72  Identities=18%  Similarity=0.049  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCcceeeecccccccc-ccccCceeeecCCCccc
Q 010432          236 SIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM-LFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       236 ~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~kl~DFGla~~  313 (511)
                      +-++.++.||+.-.-.+-. .+....+|-||||+|||+-.......-.++-        ... ..+...++|.||-+++.
T Consensus       279 ~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~--------~~~vF~Epi~~~LnDFDfSqv  350 (444)
T PHA03111        279 EYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKD--------ATYVFNEPIKACLNDFDFSQV  350 (444)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECC--------eEEEeccchhhhhcccCHHHH
Confidence            4456778888654423322 2223489999999999996532211101000        011 11345678999999886


Q ss_pred             CC
Q 010432          314 GP  315 (511)
Q Consensus       314 ~~  315 (511)
                      ..
T Consensus       351 ~~  352 (444)
T PHA03111        351 AN  352 (444)
T ss_pred             cc
Confidence            43

>PTZ00384 choline kinase; Provisional

Probab=92.09  E-value=0.98  Score=46.33  Aligned_cols=81  Identities=14%  Similarity=0.065  Sum_probs=44.8

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcc-eEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLV-KLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv-~l~~~~~~~~~~~lv  213 (511)
                      +.|..|-...+|++........   .-..+.|+++...... ...-+-.+|+.+++.|...++. ++++.+.    -++|
T Consensus        56 ~~l~gGLTN~l~~v~~~~~~~~---~~~~k~Vl~R~~g~~~-~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l  127 (383)
T PTZ00384         56 KKMNNGITNQVYQATLVDGDKD---RYPIKSVCIKKSSTYN-SLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTI  127 (383)
T ss_pred             EEeCCcccceEEEEEecCCCCC---ccccceEEEEeccCCC-ceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEE
Confidence            3555588889999976432100   0001224444432211 1111224789999999655554 5555553    2689


Q ss_pred             EEccCCCCHH
Q 010432          214 YEFMPRGSLE  223 (511)
Q Consensus       214 ~E~~~~g~L~  223 (511)
                      .||++|-+|.
T Consensus       128 ~efIeGr~l~  137 (383)
T PTZ00384        128 QEWVEGNTMG  137 (383)
T ss_pred             EEEeccccCC
Confidence            9999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	511
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-49
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-48
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-44
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-43
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-39
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		5e-39
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-38
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-36
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-21
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-21
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-20
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-20
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		4e-18
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		5e-18
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		9e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-17
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-17
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-17
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		5e-17
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		9e-17
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-16
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-16
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-16
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-16
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-16
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-16
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-16
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-16
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-16
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-16
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-16
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-16
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-16
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-15
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-15
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-15
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-15
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-15
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-15
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-15
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-15
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-15
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-15
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-15
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-15
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-15
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-15
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-15
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-15
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-15
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-15
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-15
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-15
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-15
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-15
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-15
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		4e-15
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		4e-15
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		4e-15
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		4e-15
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		4e-15
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		5e-15
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-15
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-15
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		6e-15
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		8e-15
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-15
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-15
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-14
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-14
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-14
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-14
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-14
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-14
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-14
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-14
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-14
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-14
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-14
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-14
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-14
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-14
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-14
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-14
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-14
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-14
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-14
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		5e-14
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-14
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		6e-14
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		6e-14
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		6e-14
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		6e-14
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		6e-14
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		6e-14
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		6e-14
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		6e-14
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-14
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-14
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-14
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		8e-14
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-14
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		9e-14
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		9e-14
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		9e-14
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		9e-14
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-13
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-13
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-13
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-13
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-13
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-13
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-13
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-13
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-13
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-13
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-13
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-13
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-13
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-13
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-13
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-13
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-13
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-13
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-13
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-13
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-13
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-13
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-13
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-13
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		4e-13
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		4e-13
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-13
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-13
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-13
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		5e-13
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-13
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		5e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-13
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-13
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		6e-13
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		6e-13
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-13
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		6e-13
2pl0_A	289	Lck Bound To Imatinib Length = 289		6e-13
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		7e-13
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		7e-13
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		7e-13
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		7e-13
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-13
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		8e-13
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		8e-13
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		8e-13
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		8e-13
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		9e-13
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		9e-13
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		9e-13
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		9e-13
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		9e-13
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		9e-13
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		9e-13
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		9e-13
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		9e-13
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		9e-13
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		9e-13
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-13
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		9e-13
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-12
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-12
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-12
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-12
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-12
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-12
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-12
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-12
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-12
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-12
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-12
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-12
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-12
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-12
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-12
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-12
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-12
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-12
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-12
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-12
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-12
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-12
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-12
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-12
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-12
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-12
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-12
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-12
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-12
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-12
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-12
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-12
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		4e-12
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		4e-12
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		4e-12
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		4e-12
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-12
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-12
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-12
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		4e-12
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-12
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-12
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		4e-12
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		4e-12
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-12
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-12
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-12
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-12
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		5e-12
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-12
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-12
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		6e-12
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-12
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-12
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-12
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		6e-12
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		6e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		6e-12
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-12
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-12
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		6e-12
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-12
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-12
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-12
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-12
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		8e-12
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		8e-12
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		8e-12
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		8e-12
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		8e-12
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		9e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		9e-12
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		9e-12
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-11
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-11
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-11
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-11
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-11
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-11
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-11
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-11
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-11
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-11
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-11
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-11
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-11
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-11
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-11
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-11
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-11
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-11
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-11
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-11
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-11
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-11
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-11
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		4e-11
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		4e-11
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-11
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		5e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-11
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-11
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-11
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		6e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		6e-11
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-11
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		7e-11
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		8e-11
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-10
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-10
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-10
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-10
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-10
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-10
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-10
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		2e-10
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-10
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-10
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-10
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-10
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-10
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		2e-10
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-10
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-10
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-10
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-10
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-10
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-10
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-10
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		2e-10
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-10
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-10
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-10
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-10
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-10
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-10
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-10
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-10
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-10
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-10
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-10
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		3e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		3e-10
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-10
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		5e-10
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-10
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-10
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-10
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-10
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-10
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-10
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		6e-10
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		7e-10
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		8e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		8e-10
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		8e-10
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		9e-10
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		9e-10
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		9e-10
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		9e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		9e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-09
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-09
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		1e-09
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-09
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-09
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-09
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-09
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		1e-09
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-09
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-09
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-09
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-09
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-09
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		1e-09
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-09
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-09
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-09
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-09
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-09
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-09
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-09
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-09
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-09
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-09
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-09
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-09
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-09
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-09
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-09
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		3e-09
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-09
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-09
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-09
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-09
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-09
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-09
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		3e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-09
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		3e-09
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-09
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-09
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-09
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-09
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-09
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-09
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-09
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-09
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-09
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-09
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		5e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		5e-09
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		5e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-09
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		5e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-09
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		6e-09
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-09
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-09
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		6e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-09
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-09
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-09
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		7e-09
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		7e-09
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		7e-09
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		7e-09
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		8e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		8e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		9e-09
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		9e-09
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		9e-09
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		9e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-08
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-08
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		1e-08
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-08
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-08
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-08
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-08
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-08
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		1e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-08
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-08
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-08
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-08
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-08
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-08
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-08
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-08
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-08
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		3e-08
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-08
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-08
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-08
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-08
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		4e-08
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-08
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		4e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-08
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-08
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-08
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		5e-08
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-08
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-08
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		6e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		6e-08
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		6e-08
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		6e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-08
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		6e-08
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		6e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-08
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-08
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-08
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		7e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		8e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		8e-08
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-07
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-07
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-07
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-07
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-07
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-07
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-07
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-07
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-07
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		4e-07
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-07
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		5e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		6e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		6e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		8e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		9e-07
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		9e-07
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-06
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		1e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-06
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		1e-06
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-06
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		1e-06
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		1e-06
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		2e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-06
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-06
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-06
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-06
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-06
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-06
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-06
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-06
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-06
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		4e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-06
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		5e-06
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-06
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		6e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		6e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		6e-06
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		6e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		7e-06
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		7e-06
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		7e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		8e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		8e-06
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		8e-06
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		8e-06
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-06
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		9e-06
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-06
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		9e-06
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-06
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		9e-06
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		9e-06
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		9e-06
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		9e-06
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		9e-06
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-05
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		1e-05
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-05
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-05
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-05
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-05
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-05
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-05
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-05
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-05
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-05
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-05
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-05
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		2e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-05
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-05
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-05
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-05
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		4e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		4e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		4e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		4e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		4e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		4e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		4e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		4e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		4e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		4e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		4e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		4e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		4e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		5e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		5e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		5e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		5e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		5e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		5e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		5e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		5e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		5e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		5e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		5e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		5e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		5e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		5e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		5e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		5e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		5e-05
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		5e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		6e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		6e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		7e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		7e-05
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		7e-05
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		8e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		8e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		8e-05
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		8e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		9e-05
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-04
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-04
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-04
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-04
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-04
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-04
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		2e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		2e-04
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-04
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-04
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-04
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-04
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		3e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-04
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-04
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-04
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		4e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		4e-04
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		4e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		5e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		5e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		5e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-04
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		5e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		5e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		6e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		6e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		6e-04
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		6e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		6e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		6e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		7e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		7e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		7e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		7e-04
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		7e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		7e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		7e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		7e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		7e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		8e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		8e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		8e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		8e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		8e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		8e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		8e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		8e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		8e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		8e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		8e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		8e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		8e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  191 bits (486), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/329 (35%), Positives = 184/329 (55%), Gaps = 43/329 (13%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
           +L++F+  +L++A+ NF  +++LG GGFG V+KG +            G  VAVK L  +
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----------ADGTLVAVKRLKEE 73
Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
             QG + ++  EV  +   VH NL++L G+C+   +RLLVY +M  GS+ + L  R    
Sbjct: 74  RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            PL W  R +IALG+A+GLA+LH+  +  +I+RD K +NILLD                 
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD----------------- 176
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                   +++ A + DFGLAK     D  HV   V GT G+ APEY+ TG  + ++DV+
Sbjct: 177 --------EEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVF 227
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHN--LVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
            +GV+LLE++TG+R+ D  R   + +  L++W +  L E ++   L+D  L+G++  +  
Sbjct: 228 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEV 286
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALK 437
           ++  Q+A  C    P  RP MSEVV  L+
Sbjct: 287 EQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  189 bits (481), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/329 (35%), Positives = 183/329 (55%), Gaps = 43/329 (13%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
           +L++F+  +L++A+ NF  +++LG GGFG V+KG          +   G  VAVK L  +
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAVKRLKEE 65
Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
             QG + ++  EV  +   VH NL++L G+C+   +RLLVY +M  GS+ + L  R    
Sbjct: 66  RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            PL W  R +IALG+A+GLA+LH+  +  +I+RD K +NILLD                 
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD----------------- 168
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                   +++ A + DFGLAK     D  HV   V G  G+ APEY+ TG  + ++DV+
Sbjct: 169 --------EEFEAVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVF 219
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHN--LVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
            +GV+LLE++TG+R+ D  R   + +  L++W +  L E ++   L+D  L+G++  +  
Sbjct: 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEV 278
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALK 437
           ++  Q+A  C    P  RP MSEVV  L+
Sbjct: 279 EQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 42/318 (13%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           DL+ AT NF  + L+G G FG V+KG + +          G  VA+K    +  QG +E+
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 239
             E+  L    H +LV LIG+C E ++ +L+Y++M  G+L+ HL+   LP   + W  R+
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           +I +GAA+GL +LH    R +I+RD K+ NILLD                         +
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLD-------------------------E 174
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           ++  K++DFG++K G E D+TH+   V GT GY  PEY + G LT +SDVYSFGVVL E+
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
           L  R ++ ++ P    NL EWA        +  +++DP L      +  +K    A  CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 420 SRDPKARPLMSEVVEALK 437
           +   + RP M +V+  L+
Sbjct: 294 ALSSEDRPSMGDVLWKLE 311

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  174 bits (441), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 169/318 (53%), Gaps = 42/318 (13%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           DL+ AT NF  + L+G G FG V+KG + +          G  VA+K    +  QG +E+
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 239
             E+  L    H +LV LIG+C E ++ +L+Y++M  G+L+ HL+   LP   + W  R+
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           +I +GAA+GL +LH    R +I+RD K+ NILLD                         +
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLD-------------------------E 174
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           ++  K++DFG++K G E  +TH+   V GT GY  PEY + G LT +SDVYSFGVVL E+
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
           L  R ++ ++ P    NL EWA        +  +++DP L      +  +K    A  CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 420 SRDPKARPLMSEVVEALK 437
           +   + RP M +V+  L+
Sbjct: 294 ALSSEDRPSMGDVLWKLE 311

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 170/334 (50%), Gaps = 47/334 (14%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
           +R   F+F +LK  T NF  RP S+    +GEGGFG V+KG++     A  K    + + 
Sbjct: 10  TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
            + L        +++  E+  +    H NLV+L+G+  + D   LVY +MP GSL + L 
Sbjct: 70  TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
               + PL W +R KIA GAA G+ FLHE      I+RD K++NILLD            
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 167
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                        + + AK+SDFGLA+   +  +T + +R++GT  Y APE  + G +T 
Sbjct: 168 -------------EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITP 213
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
           +SD+YSFGVVLLE++TG  ++D++R      L++       E +     ID ++    S 
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS- 270
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
              +    +A+ CL      RP + +V + L+ +
Sbjct: 271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  158 bits (400), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 169/334 (50%), Gaps = 47/334 (14%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
           +R   F+F +LK  T NF  RP S+    +GEGGFG V+KG++     A  K    + + 
Sbjct: 10  TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
            + L        +++  E+  +    H NLV+L+G+  + D   LVY +MP GSL + L 
Sbjct: 70  TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
               + PL W +R KIA GAA G+ FLHE      I+RD K++NILLD            
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 167
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                        + + AK+SDFGLA+   +  +T +  R++GT  Y APE  + G +T 
Sbjct: 168 -------------EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITP 213
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
           +SD+YSFGVVLLE++TG  ++D++R      L++       E +     ID ++    S 
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS- 270
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
              +    +A+ CL      RP + +V + L+ +
Sbjct: 271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  156 bits (395), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 168/334 (50%), Gaps = 47/334 (14%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
           +R   F+F +LK  T NF  RP S+    +GEGGFG V+KG++     A  K    + + 
Sbjct: 4   TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 63
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
            + L        +++  E+  +    H NLV+L+G+  + D   LVY +MP GSL + L 
Sbjct: 64  TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 116
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
               + PL W +R KIA GAA G+ FLHE      I+RD K++NILLD            
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 161
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                        + + AK+SDFGLA+   +  +  +  R++GT  Y APE  + G +T 
Sbjct: 162 -------------EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITP 207
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
           +SD+YSFGVVLLE++TG  ++D++R      L++       E +     ID ++    S 
Sbjct: 208 KSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS- 264
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
              +    +A+ CL      RP + +V + L+ +
Sbjct: 265 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 139/265 (52%), Gaps = 44/265 (16%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
           +R   F+F +LK  T NF  RP S+     GEGGFG V+KG++     A  K    + + 
Sbjct: 1   TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 60
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
            + L        +++  E+       H NLV+L+G+  + D   LVY + P GSL + L 
Sbjct: 61  TEELK-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS 113
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
               + PL W  R KIA GAA G+ FLHE      I+RD K++NILLD            
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 158
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                        + + AK+SDFGLA+   +  +    +R++GT  Y APE  + G +T 
Sbjct: 159 -------------EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITP 204
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNR 370
           +SD+YSFGVVLLE++TG  ++D++R
Sbjct: 205 KSDIYSFGVVLLEIITGLPAVDEHR 229

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 40/234 (17%)
Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL----AEVNF 188
           E ++G GGFG V++  WI            G  VAVK   HD  +   + +     E   
Sbjct: 12  EEIIGIGGFGKVYRAFWI------------GDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
              L H N++ L G C+++    LV EF   G L   L  + +P    I +  A+  A+G
Sbjct: 60  FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DILVNWAVQIARG 117
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH+EA  P+I+RD K+SNIL+   + EN          G   N +L      K++DF
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILI-LQKVEN----------GDLSNKIL------KITDF 160
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           GLA++     K   +    G Y + APE +     +  SDV+S+GV+L E+LTG
Sbjct: 161 GLAREWHRTTKMSAA----GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 60/323 (18%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
           LA      E  +G+GGFG V KG + ++ +          VA+K+L         + ++ 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
            +E+  EV  + +L H N+VKL  Y +  +   +V EF+P G L + L  ++ P+ WS++
Sbjct: 67  FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +++ L  A G+ ++  +   P+++RD ++ NI L ++  EN      C            
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLD-ENA---PVC------------ 167
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVL 356
               AK++DFGL++        H  + ++G + + APE +       T ++D YSF ++L
Sbjct: 168 ----AKVADFGLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
             +LTG    D+    G+   +   R   G R        PRL     +           
Sbjct: 219 YTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRLRNVIEL----------- 265
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
            C S DPK RP  S +V+ L  L
Sbjct: 266 -CWSGDPKKRPHFSYIVKELSEL 287

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 60/323 (18%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
           LA      E  +G+GGFG V KG + ++ +          VA+K+L         + ++ 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
            +E+  EV  + +L H N+VKL  Y +  +   +V EF+P G L + L  ++ P+ WS++
Sbjct: 67  FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +++ L  A G+ ++  +   P+++RD ++ NI L ++  EN      C            
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLD-ENA---PVC------------ 167
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVL 356
               AK++DFG ++        H  + ++G + + APE +       T ++D YSF ++L
Sbjct: 168 ----AKVADFGTSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
             +LTG    D+    G+   +   R   G R        PRL     +           
Sbjct: 219 YTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRLRNVIEL----------- 265
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
            C S DPK RP  S +V+ L  L
Sbjct: 266 -CWSGDPKKRPHFSYIVKELSEL 287

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 60/323 (18%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
           LA      E  +G+GGFG V KG + ++ +          VA+K+L         + ++ 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
            +E+  EV  + +L H N+VKL  Y +  +   +V EF+P G L + L  ++ P+ WS++
Sbjct: 67  FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +++ L  A G+ ++  +   P+++RD ++ NI L ++  EN      C            
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLD-ENA---PVC------------ 167
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVL 356
               AK++DF L++        H  + ++G + + APE +       T ++D YSF ++L
Sbjct: 168 ----AKVADFSLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
             +LTG    D+    G+   +   R   G R        PRL     +           
Sbjct: 219 YTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRLRNVIEL----------- 265
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
            C S DPK RP  S +V+ L  L
Sbjct: 266 -CWSGDPKKRPHFSYIVKELSEL 287

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 65/315 (20%)
Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
           +    E ++G G FG V K  W  ++            VA+K +  +  +  K ++ E+ 
Sbjct: 9   KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 54
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALG 244
            L  + H N+VKL G C+  +   LV E+   GSL N +   + PLP+   +  M   L 
Sbjct: 55  QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            ++G+A+LH    + +I+RD K  N+LL A         G  +                K
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVA---------GGTVL---------------K 147
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG A D     +TH+ T   G+  + APE     + + + DV+S+G++L E++T R+
Sbjct: 148 ICDFGTACD----IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
             D+    G    + WA  H G R    + +   +E             L   C S+DP 
Sbjct: 203 PFDEI--GGPAFRIMWAV-HNGTRPPLIKNLPKPIES------------LMTRCWSKDPS 247
Query: 425 ARPLMSEVVEALKPL 439
            RP M E+V+ +  L
Sbjct: 248 QRPSMEEIVKIMTHL 262

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 65/315 (20%)
Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
           +    E ++G G FG V K  W  ++            VA+K +  +  +  K ++ E+ 
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 53
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALG 244
            L  + H N+VKL G C+  +   LV E+   GSL N +   + PLP+   +  M   L 
Sbjct: 54  QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            ++G+A+LH    + +I+RD K  N+LL A         G  +                K
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVA---------GGTVL---------------K 146
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG A D     +TH+ T   G+  + APE     + + + DV+S+G++L E++T R+
Sbjct: 147 ICDFGTACD----IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
             D+    G    + WA  H G R    + +   +E             L   C S+DP 
Sbjct: 202 PFDEI--GGPAFRIMWAV-HNGTRPPLIKNLPKPIES------------LMTRCWSKDPS 246
Query: 425 ARPLMSEVVEALKPL 439
            RP M E+V+ +  L
Sbjct: 247 QRPSMEEIVKIMTHL 261

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W+ ++            VA+KT+  +G    ++++ E   +  L H 
Sbjct: 15  IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C+E     LV+EFM  G L ++L  +         + + L   +G+A+L E 
Sbjct: 63  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           +   VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 123 S---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 154
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +NR N E 
Sbjct: 155 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 212
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE       +    +RL  PRL        +    Q+  HC    P+ RP  S ++  
Sbjct: 213 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 436 LKPL 439
           L  +
Sbjct: 258 LAAI 261

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W+ ++            VA+KT+  +G    ++++ E   +  L H 
Sbjct: 15  IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C+E     LV+EFM  G L ++L  +         + + L   +G+A+L E 
Sbjct: 63  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 123 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 154
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +NR N E 
Sbjct: 155 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 212
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE       +    +RL  PRL        +    Q+  HC    P+ RP  S ++  
Sbjct: 213 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 436 LKPL 439
           L  +
Sbjct: 258 LAEI 261

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W+ ++            VA+KT+  +G    ++++ E   +  L H 
Sbjct: 13  IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C+E     LV+EFM  G L ++L  +         + + L   +G+A+L E 
Sbjct: 61  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 121 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 152
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +NR N E 
Sbjct: 153 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 210
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE       +    +RL  PRL        +    Q+  HC    P+ RP  S ++  
Sbjct: 211 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
Query: 436 LKPL 439
           L  +
Sbjct: 256 LAEI 259

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W+ ++            VA+KT+  +G    ++++ E   +  L H 
Sbjct: 18  IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C+E     LV+EFM  G L ++L  +         + + L   +G+A+L E 
Sbjct: 66  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 126 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 157
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +NR N E 
Sbjct: 158 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 215
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE       +    +RL  PRL        +    Q+  HC    P+ RP  S ++  
Sbjct: 216 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
Query: 436 LKPL 439
           L  +
Sbjct: 261 LAEI 264

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W+ ++            VA+KT+  +G     +++ E   +  L H 
Sbjct: 35  IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C+E     LV+EFM  G L ++L  +         + + L   +G+A+L E 
Sbjct: 83  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 143 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 174
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +NR N E 
Sbjct: 175 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 232
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE       +    +RL  PRL        +    Q+  HC    P+ RP  S ++  
Sbjct: 233 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 277
Query: 436 LKPL 439
           L  +
Sbjct: 278 LAEI 281

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W+ ++            VA+KT+  +G    ++++ E   +  L H 
Sbjct: 16  IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            LV+L G C+E     LV EFM  G L ++L  +         + + L   +G+A+L E 
Sbjct: 64  KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               VI+RD    N L+                          ++   K+SDFG+ +   
Sbjct: 124 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 155
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
           + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +NR N E 
Sbjct: 156 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 213
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
            +VE       +    +RL  PRL        +    Q+  HC    P+ RP  S ++  
Sbjct: 214 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
Query: 436 LKPL 439
           L  +
Sbjct: 259 LAEI 262

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           LGEG FG V     +     P   GTG  VAVK L  D    H+  W  E++ L  L H 
Sbjct: 39  LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 196 NLVKLIGYCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
           +++K  G C ED       LV E++P GSL ++L R S+ L  +  +  A    +G+A+L
Sbjct: 94  HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYL 150
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H +     I+RD    N+LLD                          D   K+ DFGLAK
Sbjct: 151 HAQH---YIHRDLAARNVLLD-------------------------NDRLVKIGDFGLAK 182
Query: 313 DGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             PEG + + V         + APE +        SDV+SFGV L E+LT
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG FG V     +     P   GTG  VAVK L  D G Q    W  E++ L  L H 
Sbjct: 22  LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           +++K  G C +  ++   LV E++P GSL ++L R S+ L  +  +  A    +G+A+LH
Sbjct: 77  HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
            +     I+R+    N+LLD                          D   K+ DFGLAK 
Sbjct: 135 SQH---YIHRNLAARNVLLD-------------------------NDRLVKIGDFGLAKA 166
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            PEG + + V         + APE +        SDV+SFGV L E+LT
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 96  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AKG+ FL 
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
             A +  ++RD    N +LD                         + +  K++DFGLA+D
Sbjct: 209 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 241
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 37  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ F
Sbjct: 91  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 149 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 180
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 35  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ F
Sbjct: 89  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 147 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 178
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 179 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 42  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ F
Sbjct: 96  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 154 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 185
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 186 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG FG V     +     P   GTG  VAVK L  D G Q    W  E++ L  L H 
Sbjct: 22  LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           +++K  G C +  ++   LV E++P GSL ++L R S+ L  +  +  A    +G+A+LH
Sbjct: 77  HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
            +     I+R+    N+LLD                          D   K+ DFGLAK 
Sbjct: 135 AQH---YIHRNLAARNVLLD-------------------------NDRLVKIGDFGLAKA 166
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            PEG + + V         + APE +        SDV+SFGV L E+LT
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 37  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ F
Sbjct: 91  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 149 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 180
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 38  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ F
Sbjct: 92  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 150 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 181
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 182 RDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 38  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ F
Sbjct: 92  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 150 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 181
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E D  H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 182 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 103/241 (42%), Gaps = 49/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E    +P K    + VAVK L    L   K++  E   L +L H +
Sbjct: 23  LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP----------------LPWSIRMK 240
           +VK  G C + D  ++V+E+M  G L N   R   P                L  S  + 
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           IA   A G+ +L   A +  ++RD  T N L+ A                    N+L   
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGA--------------------NLL--- 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFG+++D    D   V    M    +  PE +M    T+ SDV+SFGV+L E+ 
Sbjct: 172 --VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 361 T 361
           T
Sbjct: 230 T 230

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 101/238 (42%), Gaps = 46/238 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E     P +    + VAVKTL        K++  E   L +L H +
Sbjct: 21  LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-------------LPWSIRMKIAL 243
           +VK  G C+E D  ++V+E+M  G L N   R   P             L  S  + IA 
Sbjct: 77  IVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+ +L   A +  ++RD  T N L+                      N+L      
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVG--------------------ENLL-----V 167
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K+ DFG+++D    D   V    M    +  PE +M    T+ SDV+S GVVL E+ T
Sbjct: 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 135/322 (41%), Gaps = 59/322 (18%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK- 180
           +D+ +   +   +  +G G FG V +   E +G+          VAVK L        + 
Sbjct: 30  DDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGS---------DVAVKILMEQDFHAERV 78
Query: 181 -EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSI 237
            E+L EV  +  L H N+V  +G   +     +V E++ RGSL   L +      L    
Sbjct: 79  NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           R+ +A   AKG+ +LH     P+++RD K+ N+L+D                        
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVD------------------------ 173
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
            + Y  K+ DFGL++   +      S    GT  + APE +       +SDVYSFGV+L 
Sbjct: 174 -KKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH 417
           E+ T ++      P      V  A     +R    R ++P++            A +   
Sbjct: 231 ELATLQQPWGNLNPAQ----VVAAVGFKCKRLEIPRNLNPQV------------AAIIEG 274
Query: 418 CLSRDPKARPLMSEVVEALKPL 439
           C + +P  RP  + +++ L+PL
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPL 296

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 21  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ EF+P GSL  +L +    +     ++      KG+ +L  
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 134 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 167
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 168 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 36  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AKG+ +L 
Sbjct: 90  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
             A +  ++RD    N +LD                         + +  K++DFGLA+D
Sbjct: 149 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 181
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 182 MYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           + N  +   R+ +    LG+G FG V     E     P++  TG  VAVK L H   +  
Sbjct: 19  SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSI 237
           +++  E+  L  L H N+VK  G C    +R   L+ E++P GSL ++L +    +    
Sbjct: 74  RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 133
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            ++      KG+ +L     +  I+RD  T NIL   V  EN  K G             
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNIL---VENENRVKIG------------- 174
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVV 355
                    DFGL K  P+ DK     +  G     + APE +     +  SDV+SFGVV
Sbjct: 175 ---------DFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 356 LLEMLT 361
           L E+ T
Sbjct: 225 LYELFT 230

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 17  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 72  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 130 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 163
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 164 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           + N  +   R+ +    LG+G FG V     E     P++  TG  VAVK L H   +  
Sbjct: 19  SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSI 237
           +++  E+  L  L H N+VK  G C    +R   L+ E++P GSL ++L +    +    
Sbjct: 74  RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 133
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            ++      KG+ +L     +  I+RD  T NIL   V  EN  K G             
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNIL---VENENRVKIG------------- 174
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVV 355
                    DFGL K  P+ DK     +  G     + APE +     +  SDV+SFGVV
Sbjct: 175 ---------DFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 356 LLEMLT 361
           L E+ T
Sbjct: 225 LYELFT 230

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 25  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 80  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 138 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 171
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 172 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 21  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 134 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 167
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 168 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 23  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 78  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 136 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 169
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 170 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 16  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 71  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 129 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 162
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 163 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 24  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 79  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 137 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 170
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 171 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 22  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 77  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 135 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 168
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 169 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 49  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 162 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 195
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 196 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 18  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 131 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 164
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 165 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
           LGEG FG V     E     P    TG  VAVK+L  +    H  +   E+  L +L H 
Sbjct: 29  LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 196 NLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           N+VK  G C ED  +   L+ EF+P GSL+ +L +    +    ++K A+   KG+ +L 
Sbjct: 84  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 142
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               R  ++RD    N+L+++                         ++  K+ DFGL K 
Sbjct: 143 --GSRQYVHRDLAARNVLVES-------------------------EHQVKIGDFGLTK- 174
Query: 314 GPEGDK---THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             E DK   T    R    + YA PE +M       SDV+SFGV L E+LT
Sbjct: 175 AIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 18  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 131 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 164
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 165 PQ-DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 18  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 131 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 164
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 165 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
           LGEG FG V     E     P    TG  VAVK+L  +    H  +   E+  L +L H 
Sbjct: 17  LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 196 NLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           N+VK  G C ED  +   L+ EF+P GSL+ +L +    +    ++K A+   KG+ +L 
Sbjct: 72  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 130
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               R  ++RD    N+L+++                         ++  K+ DFGL K 
Sbjct: 131 --GSRQYVHRDLAARNVLVES-------------------------EHQVKIGDFGLTK- 162
Query: 314 GPEGDK---THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             E DK   T    R    + YA PE +M       SDV+SFGV L E+LT
Sbjct: 163 AIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 19  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L +    +     ++      KG+ +L  
Sbjct: 74  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+R+  T NIL   V  EN  K G                      DFGL K  
Sbjct: 132 -GTKRYIHRNLATRNIL---VENENRVKIG----------------------DFGLTKVL 165
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK +   +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 166 PQ-DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK- 180
           +D+ +   +   +  +G G FG V +   E +G+          VAVK L        + 
Sbjct: 30  DDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGS---------DVAVKILMEQDFHAERV 78
Query: 181 -EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSI 237
            E+L EV  +  L H N+V  +G   +     +V E++ RGSL   L +      L    
Sbjct: 79  NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           R+ +A   AKG+ +LH     P+++R+ K+ N+L+D                        
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVD------------------------ 173
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
            + Y  K+ DFGL++       T +S++   GT  + APE +       +SDVYSFGV+L
Sbjct: 174 -KKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
            E+ T ++      P      V  A     +R    R ++P++            A +  
Sbjct: 230 WELATLQQPWGNLNPAQ----VVAAVGFKCKRLEIPRNLNPQV------------AAIIE 273
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
            C + +P  RP  + +++ L+PL
Sbjct: 274 GCWTNEPWKRPSFATIMDLLRPL 296

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V     E     P++  TG  VAVK L H   +  +++  E+  L  L H N
Sbjct: 21  LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           +VK  G C    +R   L+ E++P GSL ++L   +  +     ++      KG+ +L  
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              +  I+RD  T NIL   V  EN  K G                      DFGL K  
Sbjct: 134 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 167
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           P+ DK     +  G     + APE +     +  SDV+SFGVVL E+ T
Sbjct: 168 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 36  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ +
Sbjct: 90  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 148 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 179
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 180 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 29  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AKG+ +L 
Sbjct: 83  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
             A +  ++RD    N +LD                         + +  K++DFGLA+D
Sbjct: 142 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 174
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 175 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 32  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ +
Sbjct: 86  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 144 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 175
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 37  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ +
Sbjct: 91  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 149 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 180
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 181 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 37  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AKG+ +L 
Sbjct: 91  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
             A +  ++RD    N +LD                         + +  K++DFGLA+D
Sbjct: 150 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 182
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 183 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 35  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ +
Sbjct: 89  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 147 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 178
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 179 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 56  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ +
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 168 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 199
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 200 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 55  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AKG+ +L 
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
             A +  ++RD    N +LD                         + +  K++DFGLA+D
Sbjct: 168 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 200
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 201 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
           ++G G FGCV+ G + +N       G  +  AVK+LN     G   ++L E   + D  H
Sbjct: 34  VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
            N++ L+G C+  +   L+V  +M  G L N  F R+     +++  I  G   AKG+ +
Sbjct: 88  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L   A +  ++RD    N +LD                         + +  K++DFGLA
Sbjct: 146 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 177
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +D    E    H  T       + A E + T   T++SDV+SFGV+L E++T
Sbjct: 178 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG FG V     +     P   GTG  VAVK L    G Q    W  E+  L  L H 
Sbjct: 17  LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           ++VK  G C +  ++   LV E++P GSL ++L R  + L  +  +  A    +G+A+LH
Sbjct: 72  HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 129
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
            +     I+R     N+LLD                          D   K+ DFGLAK 
Sbjct: 130 AQH---YIHRALAARNVLLD-------------------------NDRLVKIGDFGLAKA 161
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            PEG + + V         + APE +        SDV+SFGV L E+LT
Sbjct: 162 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG FG V     +     P   GTG  VAVK L    G Q    W  E+  L  L H 
Sbjct: 16  LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           ++VK  G C +  ++   LV E++P GSL ++L R  + L  +  +  A    +G+A+LH
Sbjct: 71  HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 128
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
            +     I+R     N+LLD                          D   K+ DFGLAK 
Sbjct: 129 AQH---YIHRALAARNVLLD-------------------------NDRLVKIGDFGLAKA 160
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            PEG + + V         + APE +        SDV+SFGV L E+LT
Sbjct: 161 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P          +  +  +  + E
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------GMEXSYDINRVPE 151
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD 313
           E    + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGLA+D
Sbjct: 152 EQ---MTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 89  LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 191
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 192 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 249
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 250 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 35  LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 93  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 137
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 138 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 195
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 196 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 30  LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 88  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 132
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 133 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGL 190
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 191 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 18  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 74  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 132 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 163
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 164 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 220
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 221 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLLELMRMCWQ 263
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 264 YNPKMRPSFLEIISSIK 280

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 32  LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 90  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 134
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 135 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 192
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 193 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 22  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 78  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++RD    N                          M+  D+  K
Sbjct: 136 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 167
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 168 IGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 224
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 225 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 269
Query: 423 PKARPLMSEVVEALK 437
           PK RP   E+V  LK
Sbjct: 270 PKMRPTFLEIVNLLK 284

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 27  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 83  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 141 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 172
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 229
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 230 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 273 YNPKMRPSFLEIISSIK 289

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  +++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 25  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++RD    N                          M+  D+  K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 171 IGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
           PK RP   E+V  LK
Sbjct: 273 PKMRPTFLEIVNLLK 287

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 44  IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 93
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 94  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA +   
Sbjct: 153 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATEKSR 184
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 243
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 292
Query: 434 EALKPL 439
            +++ L
Sbjct: 293 ASIELL 298

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 144/349 (41%), Gaps = 69/349 (19%)
Query: 119 FTFNDLKLATRNF---------RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           FTF D   A R F         + E ++G G FG V  G ++  G   +       VA+K
Sbjct: 14  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREI------FVAIK 67
Query: 170 TLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
           TL     +  + ++L+E + +G   H N++ L G   +    +++ EFM  GSL++ L +
Sbjct: 68  TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
                     + +  G A G+ +L   A+   ++RD    NIL+++              
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNS-------------- 170
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTS 345
                 N++      K+SDFGL++   +       T  +G      + APE +     TS
Sbjct: 171 ------NLV-----CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 219
Query: 346 RSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS 404
            SDV+S+G+V+ E+++ G R           N +E          + YRL  P       
Sbjct: 220 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE----------QDYRLPPP------- 262
Query: 405 IKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL---PN-LKDMASSS 449
           +       QL   C  +D   RP   ++V  L  +   PN LK MA  S
Sbjct: 263 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLS 311

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 16  IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 66  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA +   
Sbjct: 125 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATEKSR 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 215
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 264
Query: 434 EALKPL 439
            +++ L
Sbjct: 265 ASIELL 270

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 36  IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 85
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 86  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA +   
Sbjct: 145 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATEKSR 176
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 177 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 235
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 284
Query: 434 EALKPL 439
            +++ L
Sbjct: 285 ASIELL 290

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 70/335 (20%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQ 177
           F  ++ ++A         LG+G FG V++G     G    +P T   VA+KT+N    ++
Sbjct: 6   FVPDEWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMR 61
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL------ 231
              E+L E + + +    ++V+L+G   +    L++ E M RG L+++L  RSL      
Sbjct: 62  ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMEN 119
Query: 232 -----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
                P   S  +++A   A G+A+L+       ++RD    N                 
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNC---------------- 160
Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                    M+ +D+  K+ DFG+ +D  E D      + +    + +PE +  G  T+ 
Sbjct: 161 ---------MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 211
Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSI 405
           SDV+SFGVVL E+ T               L E  +P+ G    +  R +   +EG    
Sbjct: 212 SDVWSFGVVLWEIAT---------------LAE--QPYQGLSNEQVLRFV---MEGGLLD 251
Query: 406 K---GAQKAAQLAAHCLSRDPKARPLMSEVVEALK 437
           K         +L   C   +PK RP   E++ ++K
Sbjct: 252 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
           +LG G FG V+KG W+ E  T  +       VA+K LN   G + + E++ E   +  + 
Sbjct: 22  VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H +LV+L+G C+    +L V + MP G L  ++      +   + +   +  AKG+ +L 
Sbjct: 76  HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
           E   R +++RD    N+L   V++ N+                       K++DFGLA+ 
Sbjct: 135 E---RRLVHRDLAARNVL---VKSPNH----------------------VKITDFGLARL 166
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               +K + +        + A E +     T +SDV+S+GV + E++T
Sbjct: 167 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
           +LG G FG V+KG W+ E  T  +       VA+K LN   G + + E++ E   +  + 
Sbjct: 45  VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H +LV+L+G C+    +L V + MP G L  ++      +   + +   +  AKG+ +L 
Sbjct: 99  HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
           E   R +++RD    N+L   V++ N+                       K++DFGLA+ 
Sbjct: 158 E---RRLVHRDLAARNVL---VKSPNH----------------------VKITDFGLARL 189
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
               +K + +        + A E +     T +SDV+S+GV + E++T
Sbjct: 190 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++  +  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 44/231 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V+KG W   +G   VK    L V   T     LQ  K    EV  L    H+
Sbjct: 32  IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH +
Sbjct: 81  NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           +   +I+RD K++NI L                          +D   K+ DFGLA +  
Sbjct: 140 S---IIHRDLKSNNIFL-------------------------HEDNTVKIGDFGLATEKS 171
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR 363
               +H   ++ G+  + APE +    +   + +SDVY+FG+VL E++TG+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 20  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 76  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 134 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 165
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 222
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 223 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 265
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 266 YNPKMRPSFLEIISSIK 282

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G  +  G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 33  LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 147 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 178
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 235
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 236 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 279 YNPKMRPSFLEIISSIK 295

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 46/238 (19%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLV 193
           +LGEG FG V +G +++      + GT L VAVKT+  D     +  E+L+E   + D  
Sbjct: 41  ILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 194 HLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLP-----LPWSIRMKIAL 243
           H N+++L+G CIE   +     +++  FM  G L  +L    L      +P    +K  +
Sbjct: 95  HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+ +L   + R  ++RD    N                          ML  D   
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNC-------------------------MLRDDMTV 186
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            ++DFGL+K    GD             + A E +     TS+SDV++FGV + E+ T
Sbjct: 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G  +  G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 55  LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                C         M+ +D+  K
Sbjct: 169 IADGMAYLNANK---FVHRDLAARN----------------C---------MVAEDFTVK 200
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 257
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 258 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 300
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 301 YNPKMRPSFLEIISSIK 317

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G  +  G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 33  LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 147 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 178
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 235
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 236 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 279 YNPKMRPSFLEIISSIK 295

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G  +  G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 26  LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 82  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 140 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 171
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 228
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 229 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 272 YNPKMRPSFLEIISSIK 288

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 27  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 83  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 141 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 172
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 229
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 230 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 273 YNPKMRPSFLEIISSIK 289

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 24  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 80  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++RD    N                          M+  D+  K
Sbjct: 138 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 169
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 226
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 227 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 271
Query: 423 PKARPLMSEVVEALK 437
           PK RP   E+V  LK
Sbjct: 272 PKMRPTFLEIVNLLK 286

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 46/237 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 25  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++RD    N                          M+  D+  K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +
Sbjct: 171 IGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 23  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 79  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 137 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 168
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 225
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 226 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 268
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 269 YNPKMRPSFLEIISSIK 285

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 26  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 82  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N                          M+ +D+  K
Sbjct: 140 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 171
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 228
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 229 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 272 YNPKMRPSFLEIISSIK 288

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V+KG W   +G   VK    L V   T     LQ  K    EV  L    H+
Sbjct: 32  IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N++  +GY     Q  +V ++    SL +HL            + IA   A+G+ +LH +
Sbjct: 81  NILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           +   +I+RD K++NI L                          +D   K+ DFGLA +  
Sbjct: 140 S---IIHRDLKSNNIFL-------------------------HEDNTVKIGDFGLATEKS 171
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR 363
               +H   ++ G+  + APE +    +   + +SDVY+FG+VL E++TG+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 25  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++RD    N                          M+  D+  K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 171 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
           PK RP   E+V  LK
Sbjct: 273 PKMRPTFLEIVNLLK 287

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 21  IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 71  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 130 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 161
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 220
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 269
Query: 434 EALKPL 439
            +++ L
Sbjct: 270 ASIELL 275

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP   +TVAVK L  D  +    + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
            N++ L+G C +D    ++  +  +G+L  +L  R  P               G+ +   
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
           ++   E  + ++D  +    L   R   Y     CI+  L   N+L  + N  K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           A+D    D    +T       + APE +     T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 21  IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 71  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 130 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 161
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 220
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 269
Query: 434 EALKPL 439
            +++ L
Sbjct: 270 ASIELL 275

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 18  IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 67
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 68  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 127 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 158
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 159 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 217
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 266
Query: 434 EALKPL 439
            +++ L
Sbjct: 267 ASIELL 272

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 44  IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 93
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 94  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 153 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATVKSR 184
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 243
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 292
Query: 434 EALKPL 439
            +++ L
Sbjct: 293 ASIELL 298

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 43  IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 92
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 93  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 152 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATVKSR 183
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 184 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 242
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 291
Query: 434 EALKPL 439
            +++ L
Sbjct: 292 ASIELL 297

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 16  IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 66  ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 125 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 215
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 264
Query: 434 EALKPL 439
            +++ L
Sbjct: 265 ASIELL 270

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 57/259 (22%)
Query: 129 RNFRPESL-----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           R FRP  L     LG+G FG   K    E         TG  + +K L     +  + +L
Sbjct: 5   RIFRPSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFL 55
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            EV  +  L H N++K IG   +D +   + E++  G+L   +       PWS R+  A 
Sbjct: 56  KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK 115
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+A+LH      +I+RD  + N L+                          ++ N 
Sbjct: 116 DIASGMAYLHSMN---IIHRDLNSHNCLVR-------------------------ENKNV 147
Query: 304 KLSDFGLA------KDGPEG-------DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
            ++DFGLA      K  PEG       D+    T V+G   + APE +       + DV+
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVF 206
Query: 351 SFGVVLLEMLTGRRSMDKN 369
           SFG+VL E++ GR + D +
Sbjct: 207 SFGIVLCEII-GRVNADPD 224

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V+KG W   +G   VK    L V   T     LQ  K    EV  L    H+
Sbjct: 20  IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 68
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N++  +GY  +  Q  +V ++    SL +HL            + IA   A+G+ +LH +
Sbjct: 69  NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           +   +I+RD K++NI L                          +D   K+ DFGLA    
Sbjct: 128 S---IIHRDLKSNNIFL-------------------------HEDNTVKIGDFGLATVKS 159
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR 363
               +H   ++ G+  + APE +    +   + +SDVY+FG+VL E++TG+
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G FG V+KG  + +G   VK    L V   T     LQ  K    EV  L    H+N
Sbjct: 16  IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           ++  +GY     Q  +V ++    SL +HL            + IA   A+G+ +LH ++
Sbjct: 66  ILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+RD K++NI L                          +D   K+ DFGLA     
Sbjct: 125 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
              +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+     N  N 
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 215
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           +  +    R +L       R   P+              +L A CL +    RPL  +++
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 264
Query: 434 EALKPL 439
            +++ L
Sbjct: 265 ASIELL 270

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E +   P +    + VAVK L        +++  E   L  L H +
Sbjct: 26  LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
           +V+  G C E    L+V+E+M  G L    F RS                 PL     + 
Sbjct: 82  IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +A   A G+ +L   A    ++RD  T N L+                          Q 
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QG 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFG+++D    D   V  R M    +  PE ++    T+ SDV+SFGVVL E+ 
Sbjct: 172 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
Query: 361 T 361
           T
Sbjct: 232 T 232

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E +   P +    + VAVK L        +++  E   L  L H +
Sbjct: 20  LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
           +V+  G C E    L+V+E+M  G L    F RS                 PL     + 
Sbjct: 76  IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +A   A G+ +L   A    ++RD  T N L+                          Q 
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QG 165
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFG+++D    D   V  R M    +  PE ++    T+ SDV+SFGVVL E+ 
Sbjct: 166 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
Query: 361 T 361
           T
Sbjct: 226 T 226

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R+ +  S LG+G FG V     E     P+   TG  VAVK L H G    +++  E+  
Sbjct: 10  RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           L  L    +VK   + Y        LV E++P G L + L R    L  S  +  +    
Sbjct: 65  LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KG+ +L     R  ++RD    NIL+++                         + + K++
Sbjct: 125 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 156
Query: 307 DFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           DFGLAK  P  DK +   R  G     + APE +     + +SDV+SFGVVL E+ T
Sbjct: 157 DFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E +   P +    + VAVK L        +++  E   L  L H +
Sbjct: 49  LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
           +V+  G C E    L+V+E+M  G L    F RS                 PL     + 
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +A   A G+ +L   A    ++RD  T N L+                          Q 
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QG 194
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFG+++D    D   V  R M    +  PE ++    T+ SDV+SFGVVL E+ 
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 361 T 361
           T
Sbjct: 255 T 255

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R+ +  S LG+G FG V     E     P+   TG  VAVK L H G    +++  E+  
Sbjct: 11  RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           L  L    +VK   + Y        LV E++P G L + L R    L  S  +  +    
Sbjct: 66  LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KG+ +L     R  ++RD    NIL+++                         + + K++
Sbjct: 126 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 157
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYG--YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           DFGLAK  P  DK +   R  G     + APE +     + +SDV+SFGVVL E+ T
Sbjct: 158 DFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R+ +  S LG+G FG V     E     P+   TG  VAVK L H G    +++  E+  
Sbjct: 23  RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           L  L    +VK   + Y        LV E++P G L + L R    L  S  +  +    
Sbjct: 78  LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KG+ +L     R  ++RD    NIL+++                         + + K++
Sbjct: 138 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 169
Query: 307 DFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           DFGLAK  P  DK +   R  G     + APE +     + +SDV+SFGVVL E+ T
Sbjct: 170 DFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 20  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L++ E M RG L+++L  RSL           P   S  +++A  
Sbjct: 76  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+       ++RD    N  +                          +D+  K
Sbjct: 134 IADGMAYLNANK---FVHRDLAARNCXVA-------------------------EDFTVK 165
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+ T   
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 222
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
                       L E  +P+ G    +  R +   +EG    K         +L   C  
Sbjct: 223 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLLELMRMCWQ 265
Query: 421 RDPKARPLMSEVVEALK 437
            +PK RP   E++ ++K
Sbjct: 266 YNPKMRPSFLEIISSIK 282

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 56/311 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G FG V +G ++    AP K  +   VA+KTL     +  + E+L+E + +G  
Sbjct: 21  EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+++L G        +++ EFM  G+L++ L            + +  G A G+ +L
Sbjct: 75  EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              AE   ++RD    NIL+++                    N++      K+SDFGL++
Sbjct: 135 ---AEMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 166
Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
              E       T  +G      + APE +     TS SD +S+G+V+ E+++ G R    
Sbjct: 167 FLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 226
Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
                  N +E          + YRL  P               QL   C  +D  ARP 
Sbjct: 227 MSNQDVINAIE----------QDYRLPPPP-------DCPTSLHQLMLDCWQKDRNARPR 269
Query: 429 MSEVVEALKPL 439
             +VV AL  +
Sbjct: 270 FPQVVSALDKM 280

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 121/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
           LG G FG V    +E      +K    +TVAVK L        +E L      +++LG+ 
Sbjct: 54  LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
            H+N+V L+G C      L++ E+   G L N L R+      S                
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +  +   AKG+AFL   A +  I+RD    NILL   R                   
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 206
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   K+ DFGLA+D        V         + APE +     T  SDV+S+G+ 
Sbjct: 207 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 259
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
           L E+ +   S                 P +    +FY++I    EG   +      A++ 
Sbjct: 260 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 301
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
                C   DP  RP   ++V+ ++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIE 326

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 21  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYCYN 123
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 19  LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 69  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 127 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
            GD             + APE +     + +SDV++FGV+L E+ T G        P+  
Sbjct: 161 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
           + L+E          + YR+  P  EG       +K  +L   C   +P  RP  +E+ +
Sbjct: 220 YELLE----------KDYRMERP--EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 435 ALKPL 439
           A + +
Sbjct: 263 AFETM 267

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 121/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
           LG G FG V    +E      +K    +TVAVK L        +E L      +++LG+ 
Sbjct: 49  LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
            H+N+V L+G C      L++ E+   G L N L R+      S                
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +  +   AKG+AFL   A +  I+RD    NILL   R                   
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 201
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   K+ DFGLA+D        V         + APE +     T  SDV+S+G+ 
Sbjct: 202 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 254
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
           L E+ +   S                 P +    +FY++I    EG   +      A++ 
Sbjct: 255 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 296
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
                C   DP  RP   ++V+ ++
Sbjct: 297 DIMKTCWDADPLKRPTFKQIVQLIE 321

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 36  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL F   
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEFSFN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 128/295 (43%), Gaps = 64/295 (21%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V+ G W   NG           VA+KTL   G    + +L E   +  L H 
Sbjct: 17  LGNGQFGEVWMGTW---NGNT--------KVAIKTLK-PGTMSPESFLEEAQIMKKLKHD 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
            LV+L    + ++   +V E+M +GSL + L     R+L LP  + M  A   A G+A++
Sbjct: 65  KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM--AAQVAAGMAYI 121
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
                   I+RD +++NIL+        G    C                 K++DFGLA+
Sbjct: 122 ER---MNYIHRDLRSANILV--------GNGLIC-----------------KIADFGLAR 153
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
              + + T           + APE  + G  T +SDV+SFG++L E++T  R       N
Sbjct: 154 LIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
Query: 373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
                    R  L +  R YR+  P+ +   S+       +L  HC  +DP+ RP
Sbjct: 213 ---------REVLEQVERGYRMPCPQ-DCPISLH------ELMIHCWKKDPEERP 251

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 121/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
           LG G FG V    +E      +K    +TVAVK L        +E L      +++LG+ 
Sbjct: 31  LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
            H+N+V L+G C      L++ E+   G L N L R+      S                
Sbjct: 86  -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +  +   AKG+AFL   A +  I+RD    NILL   R                   
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 183
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   K+ DFGLA+D        V         + APE +     T  SDV+S+G+ 
Sbjct: 184 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
           L E+ +   S                 P +    +FY++I    EG   +      A++ 
Sbjct: 237 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 278
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
                C   DP  RP   ++V+ ++
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIE 303

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 123/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
           LG G FG V    +E      +K    +TVAVK L        +E L      +++LG+ 
Sbjct: 47  LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
            H+N+V L+G C      L++ E+   G L N L R+      S                
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +  +   AKG+AFL   A +  I+RD    NILL       +G+             
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL------THGRI------------ 199
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   K+ DFGLA+D        V         + APE +     T  SDV+S+G+ 
Sbjct: 200 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 252
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
           L E+ +   S                 P +    +FY++I    EG   +      A++ 
Sbjct: 253 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 294
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
                C   DP  RP   ++V+ ++
Sbjct: 295 DIMKTCWDADPLKRPTFKQIVQLIE 319

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R+ +  S LG+G FG V     E     P+   TG  VAVK L H G    +++  E+  
Sbjct: 7   RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
           L  L    +VK   + Y     +  LV E++P G L + L R    L  S  +  +    
Sbjct: 62  LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KG+ +L     R  ++RD    NIL+++                         + + K++
Sbjct: 122 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 153
Query: 307 DFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           DFGLAK  P + D   V         + APE +     + +SDV+SFGVVL E+ T
Sbjct: 154 DFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 123/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +  L H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 91  DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL---TCPGPGRV------- 196
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 197 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 305 PNFAIILERIE 315

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 123/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +  L H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 77  DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 182
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 183 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 291 PNFAIILERIE 301

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 56/311 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G FG V +G ++    AP K  +   VA+KTL     +  + E+L+E + +G  
Sbjct: 19  EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+++L G        +++ EFM  G+L++ L            + +  G A G+ +L
Sbjct: 73  EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              AE   ++RD    NIL+++                    N++      K+SDFGL++
Sbjct: 133 ---AEMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 164
Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
              E       T  +G      + APE +     TS SD +S+G+V+ E+++ G R    
Sbjct: 165 FLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
                  N +E          + YRL  P               QL   C  +D  ARP 
Sbjct: 225 MSNQDVINAIE----------QDYRLPPPP-------DCPTSLHQLMLDCWQKDRNARPR 267
Query: 429 MSEVVEALKPL 439
             +VV AL  +
Sbjct: 268 FPQVVSALDKM 278

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 29  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 78  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 136 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 169 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 228 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 263

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 27  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 76  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 134 --RNYIHRDLRAANILVSDT-------------------------LSCKIADFGLARLIE 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 167 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 226 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 261

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 36  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYCYN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           + ++G G FG V+KG ++ +      P     VA+KTL     +  + ++L E   +G  
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+++L G   +    +++ E+M  G+L+  L  +         + +  G A G+ +L
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              A    ++RD    NIL+++                    N++      K+SDFGL++
Sbjct: 164 ---ANMNYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 195
Query: 313 ---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
              D PE   T    ++     + APE +     TS SDV+SFG+V+ E++T
Sbjct: 196 VLEDDPEATYTTSGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 25  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 83  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 127
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 30  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 79  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 137 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 170 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 229 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 264

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 21  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 161 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 36  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP---------------GLEYSYN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 19  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 69  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 127 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
            GD             + APE +     + +SDV++FGV+L E+ T G        P+  
Sbjct: 161 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
           + L+E          + YR+  P  EG       +K  +L   C   +P  RP  +E+ +
Sbjct: 220 YELLE----------KDYRMERP--EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 435 ALKPL 439
           A + +
Sbjct: 263 AFETM 267

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 29  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 87  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 131
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 28  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 86  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 130
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 191 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 36  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGLA+   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 25  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++RD    N                          M+  D+  K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E        + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 171 IGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
           PK RP   E+V  LK
Sbjct: 273 PKMRPTFLEIVNLLK 287

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 31  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 80  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 138 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 170
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 171 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 230 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 265

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 23  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 72  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 130 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 163 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 222 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 257

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 21  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 161 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 22  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 71  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 129 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 162 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 221 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 256

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 63  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 122 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRDL------------------------ 153
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D  +V        + + APE + T   +  SD + FGV L EM T
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 127/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 25  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++R+    N                          M+  D+  K
Sbjct: 139 IADGMAYLNA---KKFVHRNLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 171 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
           P  RP   E+V  LK
Sbjct: 273 PNMRPTFLEIVNLLK 287

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 127/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G    N    +K      VAVKT+N    L+   E+L E + +      
Sbjct: 26  LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
           ++V+L+G   +    L+V E M  G L+++L  RSL           P      +++A  
Sbjct: 82  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+A+L+    +  ++R+    N                          M+  D+  K
Sbjct: 140 IADGMAYLNA---KKFVHRNLAARNC-------------------------MVAHDFTVK 171
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+ +D  E D      + +    + APE +  G  T+ SD++SFGVVL E+ +   
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 228
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
                       L E     L   +    ++D    G+        ++   L   C   +
Sbjct: 229 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 273
Query: 423 PKARPLMSEVVEALK 437
           P  RP   E+V  LK
Sbjct: 274 PNMRPTFLEIVNLLK 288

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 75
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 76  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQP 134
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 181
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 182 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 290 PNFAIILERIE 300

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 26  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 75  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 133 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 165
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 166 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 225 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 260

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 91  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL---TCPGPGRV------- 196
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 197 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 305 PNFAIILERIE 315

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 27  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 76  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 134 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 167 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 226 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 261

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 12  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 67
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 68  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 126
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 173
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 174 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 222 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 281
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 282 PNFAIILERIE 292

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 16  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 65  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 123 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 155
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 156 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 215 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 250

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 75
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 76  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 134
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 181
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 182 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 290 PNFAIILERIE 300

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 59  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 149
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D  +V        + + APE + T   +  SD + FGV L EM T
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 69  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 128 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 159
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D  +V        + + APE + T   +  SD + FGV L EM T
Sbjct: 160 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 37  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 92
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 93  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 151
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 198
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 199 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 247 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 306
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 307 PNFAIILERIE 317

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 63  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 122 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 153
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D  +V        + + APE + T   +  SD + FGV L EM T
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 77  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 182
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 183 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 291 PNFAIILERIE 301

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 47  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 102
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 161
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 208
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 209 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 257 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 316
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 317 PNFAIILERIE 327

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 19  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 69  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 127 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
            GD             + APE +     + +SDV++FGV+L E+ T G        P+  
Sbjct: 161 -GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
           + L+E          + YR+  P  EG       +K  +L   C   +P  RP  +E+ +
Sbjct: 220 YELLE----------KDYRMERP--EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 435 ALKPL 439
           A + +
Sbjct: 263 AFETM 267

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 59  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 149
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D  +V        + + APE + T   +  SD + FGV L EM T
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 27  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 82
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 83  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 141
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 188
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 189 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 237 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 296
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 297 PNFAIILERIE 307

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVYSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 91  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL---TCPGPGRV------- 196
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 197 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 305 PNFAIILERIE 315

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 21  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 161 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGFVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 77  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 182
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 183 ------------AKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 291 PNFAIILERIE 301

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 39  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 92
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 93  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 152
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 153 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 184
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 243 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 286
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 287 KDRNNRPKFEQIVSILDKL 305

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 61  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 116
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 175
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 222
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 223 ------------AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 271 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 330
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 331 PNFAIILERIE 341

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
           LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  +  +  H
Sbjct: 77  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N++ L+G C +D    ++ E+  +G+L  +L  R  P               GL + + 
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 179
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
            +  P      K   +      R   Y     CI+  L   N+L  + N  K++DFGLA+
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D    D    +T       + APE +     T +SDV+SFGV+L E+ T
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 66  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 126 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 157
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 216 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 259
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 260 KDRNNRPKFEQIVSILDKL 278

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 29  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 82
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 83  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 142
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L +      ++RD    NIL+++                    N++      
Sbjct: 143 GIASGMKYLSDMG---YVHRDLAARNILINS--------------------NLV-----C 174
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 233 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 276
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 277 KDRNNRPKFEQIVSILDKL 295

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
           + +DLK   R N      LG G FG V++G +      P    + L VAVKTL      Q
Sbjct: 38  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 93
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
              ++L E   +    H N+V+ IG  ++   R ++ E M  G L++ L R + P    P
Sbjct: 94  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 152
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            S+ M     +A   A G  +L E      I+RD    N LL        G+        
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 199
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                       AK+ DFG+A+D             M    +  PE  M G  TS++D +
Sbjct: 200 ------------AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 247
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
           SFGV+L E+ +                     GR    KN P   + ++     H  E R
Sbjct: 248 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 307
Query: 390 RFYRLIDPRLE 400
             + +I  R+E
Sbjct: 308 PNFAIILERIE 318

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 3   EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 50
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 51  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 108
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 109 -AAQIASGMAYVERMN---YVHRDLRAANILVG-------------------------EN 139
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 140 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 198
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 199 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 242
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 243 KDPEERP 249

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 5   EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 52
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 53  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 111 -AAQIASGMAYVERMN---YVHRDLRAANILVG-------------------------EN 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 142 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 200
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 201 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 244
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 245 KDPEERP 251

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E+M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL +   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 69  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 128 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 159
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D   V        + + APE + T   +  SD + FGV L EM T
Sbjct: 160 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 46/254 (18%)
Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAV 168
           +KV +R+ K T           R   +LG G FG V KG WI E  +  +       V +
Sbjct: 3   MKVLARIFKET---------ELRKLKVLGSGVFGTVHKGVWIPEGESIKI------PVCI 47
Query: 169 KTL-NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF 227
           K + +  G Q  +     +  +G L H ++V+L+G C     +L V +++P GSL +H+ 
Sbjct: 48  KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVR 106
Query: 228 RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI 287
           +    L   + +   +  AKG+ +L E     +++R+    N+LL +             
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS------------- 150
Query: 288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS 347
                           +++DFG+A   P  DK  + +       + A E +  G  T +S
Sbjct: 151 ------------PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198
Query: 348 DVYSFGVVLLEMLT 361
           DV+S+GV + E++T
Sbjct: 199 DVWSYGVTVWELMT 212

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 120/325 (36%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
           LG G FG V    +E      +K    +TVAVK L        +E L      +++LG+ 
Sbjct: 54  LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
            H+N+V L+G C      L++ E+   G L N L R+      S                
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +  +   AKG+AFL   A +  I+RD    NILL   R                   
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 206
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   K+ DFGLA+         V         + APE +     T  SDV+S+G+ 
Sbjct: 207 -------TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 259
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
           L E+ +   S                 P +    +FY++I    EG   +      A++ 
Sbjct: 260 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 301
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
                C   DP  RP   ++V+ ++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIE 326

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
           +  ++ R    LG+G FG V +G       AP   G  ++VAVK L  D L   +   ++
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + EVN +  L H NL++L G  +    + +V E  P GSL + L +           + A
Sbjct: 59  IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +  A+G+ +L  E++R  I+RD    N+LL A R                          
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 149
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            K+ DFGL +  P+ D   V        + + APE + T   +  SD + FGV L EM T
Sbjct: 150 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 49/256 (19%)
Query: 119 FTFNDLKLATRNF---------RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           FTF D   A R F         + E ++G G FG V  G ++  G   +       VA+K
Sbjct: 10  FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIK 63
Query: 170 TLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
           TL      +  +++L+E + +G   H N++ L G   +    +++ E+M  GSL+  L +
Sbjct: 64  TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
                     + +  G   G+ +L   ++   ++RD    NIL+++              
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNS-------------- 166
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                 N++      K+SDFG+++   D PE   T    ++     + APE +     TS
Sbjct: 167 ------NLV-----CKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTS 213
Query: 346 RSDVYSFGVVLLEMLT 361
            SDV+S+G+V+ E+++
Sbjct: 214 ASDVWSYGIVMWEVMS 229

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  + H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 62  QEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 46/253 (18%)
Query: 111 KVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVK 169
           KV +R+ K T           R   +LG G FG V KG WI E  +  +       V +K
Sbjct: 22  KVLARIFKET---------ELRKLKVLGSGVFGTVHKGVWIPEGESIKI------PVCIK 66
Query: 170 TL-NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
            + +  G Q  +     +  +G L H ++V+L+G C     +L V +++P GSL +H+ +
Sbjct: 67  VIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQ 125
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
               L   + +   +  AKG+ +L E     +++R+    N+LL +              
Sbjct: 126 HRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS-------------- 168
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          +++DFG+A   P  DK  + +       + A E +  G  T +SD
Sbjct: 169 -----------PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSD 217
Query: 349 VYSFGVVLLEMLT 361
           V+S+GV + E++T
Sbjct: 218 VWSYGVTVWELMT 230

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD   +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLAAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 17  LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 66  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+R+ + +NIL+                             + K++DFGLA+   
Sbjct: 124 --RNYIHRNLRAANILVS-------------------------DTLSCKIADFGLARLIE 156
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 157 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 216 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 251

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGAVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +G L + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 22  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 72  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 130 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 163
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 164 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 212
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 213 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
Query: 435 ALKPL 439
           A + +
Sbjct: 266 AFETM 270

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 73/327 (22%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
           +++ L+TR       +G G FG V+KG  + +G   VK      + V     +  Q  + 
Sbjct: 36  SEVMLSTR-------IGSGSFGTVYKG--KWHGDVAVK-----ILKVVDPTPEQFQAFRN 81
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
              EV  L    H+N++  +GY  +D+   +V ++    SL  HL  +         + I
Sbjct: 82  ---EVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI 137
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
           A   A+G+ +LH    + +I+RD K++NI L               + GL          
Sbjct: 138 ARQTAQGMDYLHA---KNIIHRDMKSNNIFL---------------HEGL---------- 169
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLE 358
             K+ DFGLA        +    +  G+  + APE +        + +SDVYS+G+VL E
Sbjct: 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE 229
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI-----DPRLEGHFSIKGAQKAAQ 413
           ++TG                E    H+  R +   ++      P L   +  K   KA +
Sbjct: 230 LMTG----------------ELPYSHINNRDQIIFMVGRGYASPDLSKLY--KNCPKAMK 271
Query: 414 -LAAHCLSRDPKARPLMSEVVEALKPL 439
            L A C+ +  + RPL  +++ +++ L
Sbjct: 272 RLVADCVKKVKEERPLFPQILSSIELL 298

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 56/240 (23%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
           ++   + + E  LG G FG V+     ++            VAVKT+   G    + +LA
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLA 226
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
           E N +  L H  LVKL    +  +   ++ EFM +GSL + L        PLP  I    
Sbjct: 227 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            +  A+G+AF+ +   R  I+RD + +NIL+ A                           
Sbjct: 286 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLV------------------------ 316
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             K++DFGLA+ G +               + APE +  G  T +SDV+SFG++L+E++T
Sbjct: 317 -CKIADFGLARVGAKF-----------PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 26  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L+G C  +    ++ EFM  G+L ++L   +      +   + L  A  ++   E  
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 132
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           E+   I+RD    N L+                          +++  K++DFGL++   
Sbjct: 133 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 168 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
           A + +
Sbjct: 270 AFETM 274

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 40/241 (16%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L     + E ++G G FG V  G ++  G   V       VA+KTL     +  + ++L
Sbjct: 39  ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDV------AVAIKTLKVGYTEKQRRDFL 92
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+V L G        ++V EFM  G+L+  L +          + +  
Sbjct: 93  CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR 152
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   A+   ++RD    NIL+++                    N++      
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNS--------------------NLV-----C 184
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + APE +     TS SDV+S+G+V+ E++
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
Query: 361 T 361
           +
Sbjct: 243 S 243

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 41  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E M  GSL++ L +          + +  
Sbjct: 95  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 71  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
           A + +
Sbjct: 265 AFETM 269

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 122/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G  G V+ G+   NG           VAVK+L   G      +LAE N +  L H  
Sbjct: 21  LGAGQAGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L    +  +   ++ E+M  GSL + L   S + L  +  + +A   A+G+AF+ E 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             R  I+RD + +NIL+                             + K++DFGLA+   
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           + + T           + APE +  G  T +SDV+SFG++L E++T  R       N E 
Sbjct: 161 DAEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
             NL            R YR++ P           ++  QL   C    P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +G L + L     + L LP  + M 
Sbjct: 62  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
           +DP+ RP
Sbjct: 254 KDPEERP 260

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 26  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L+G C  +    ++ EFM  G+L ++L   +      +   + L  A  ++   E  
Sbjct: 76  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 132
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           E+   I+RD    N L+                          +++  K++DFGL++   
Sbjct: 133 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
           A + +
Sbjct: 270 AFETM 274

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 119/312 (38%), Gaps = 58/312 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    L VAVK L        KE L +E+  +  L  H
Sbjct: 46  LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGA 245
            N+V L+G C      L++ E+   G L N L R++          PL     +  +   
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A+G+AFL   A +  I+RD    N+LL                            + AK+
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGHVAKI 193
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
            DFGLA+D        V         + APE +     T +SDV+S+G++L E+     S
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----S 249
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
           +  N             P +    +FY+L+    +        +    +   C + +P  
Sbjct: 250 LGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH 298
Query: 426 RPLMSEVVEALK 437
           RP   ++   L+
Sbjct: 299 RPTFQQICSFLQ 310

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 119/312 (38%), Gaps = 58/312 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    L VAVK L        KE L +E+  +  L  H
Sbjct: 54  LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGA 245
            N+V L+G C      L++ E+   G L N L R++          PL     +  +   
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A+G+AFL   A +  I+RD    N+LL                            + AK+
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGHVAKI 201
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
            DFGLA+D        V         + APE +     T +SDV+S+G++L E+     S
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----S 257
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
           +  N             P +    +FY+L+    +        +    +   C + +P  
Sbjct: 258 LGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH 306
Query: 426 RPLMSEVVEALK 437
           RP   ++   L+
Sbjct: 307 RPTFQQICSFLQ 318

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 71  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
           A + +
Sbjct: 265 AFETM 269

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   N   + ++G G FG V  G ++     P K    ++VA+KTL     +  + ++L
Sbjct: 12  ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E + +G   H N+++L G   +    ++V E M  GSL++ L +          + +  
Sbjct: 66  GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L   ++   ++RD    NIL+++                    N++      
Sbjct: 126 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 157
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           K+SDFGL++   D PE   T    ++     + +PE +     TS SDV+S+G+VL E++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +        RP  E +     +  +      YRL  P       +       QL   C  
Sbjct: 216 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 259
Query: 421 RDPKARPLMSEVVEALKPL 439
           +D   RP   ++V  L  L
Sbjct: 260 KDRNNRPKFEQIVSILDKL 278

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
           A + +
Sbjct: 265 AFETM 269

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 26  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L+G C  +    ++ EFM  G+L ++L   +      +   + L  A  ++   E  
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 132
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           E+   I+RD    N L+                          +++  K++DFGL++   
Sbjct: 133 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
           A + +
Sbjct: 270 AFETM 274

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 26  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 134 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
           A + +
Sbjct: 270 AFETM 274

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
           A + +
Sbjct: 265 AFETM 269

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
           ++   + + E  LG G FG V+     ++            VAVKT+   G    + +LA
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKH----------TKVAVKTMK-PGSMSVEAFLA 232
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
           E N +  L H  LVKL    +  +   ++ EFM +GSL + L        PLP  I    
Sbjct: 233 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            +  A+G+AF+ +   R  I+RD + +NIL+ A                           
Sbjct: 292 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLV------------------------ 322
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             K++DFGLA+   + + T           + APE +  G  T +SDV+SFG++L+E++T
Sbjct: 323 -CKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L+G C  +    ++ EFM  G+L ++L   +      +   + L  A  ++   E  
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 127
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           E+   I+RD    N L+                          +++  K++DFGL++   
Sbjct: 128 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
           A + +
Sbjct: 265 AFETM 269

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 25  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L+G C  +    ++ EFM  G+L ++L   +      +   + L  A  ++   E  
Sbjct: 75  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 131
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           E+   I+RD    N L+                          +++  K++DFGL++   
Sbjct: 132 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 167 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 215
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 216 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
Query: 435 ALKPL 439
           A + +
Sbjct: 269 AFETM 273

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 34  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 84  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 142 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 175
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 176 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 224
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 225 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
Query: 435 ALKPL 439
           A + +
Sbjct: 278 AFETM 282

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 23  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 73  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 131 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 165 -GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 213
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 214 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 435 ALKPL 439
           A + +
Sbjct: 267 AFETM 271

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
           ++   + + E  LG G FG V+     ++            VAVKT+   G    + +LA
Sbjct: 11  EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLA 59
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
           E N +  L H  LVKL    +  +   ++ EFM +GSL + L        PLP  I    
Sbjct: 60  EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            +  A+G+AF+ +   R  I+RD + +NIL+ A                           
Sbjct: 119 QI--AEGMAFIEQ---RNYIHRDLRAANILVSA-------------------------SL 148
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             K++DFGLA+   + + T           + APE +  G  T +SDV+SFG++L+E++T
Sbjct: 149 VCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 22  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 72  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 130 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 163
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 164 -GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 212
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 213 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
Query: 435 ALKPL 439
           A + +
Sbjct: 266 AFETM 270

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 60/251 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
           +GEG FG VF+      G  P +P T   VAVK L  +       ++  E   + +  + 
Sbjct: 55  IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL------------------------ 231
           N+VKL+G C       L++E+M  G L    F RS+                        
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNE--FLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 232 -PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            PL  + ++ IA   A G+A+L   +ER  ++RD  T N L+                  
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVG----------------- 208
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
               NM+      K++DFGL+++    D             +  PE +     T+ SDV+
Sbjct: 209 ---ENMV-----VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 260
Query: 351 SFGVVLLEMLT 361
           ++GVVL E+ +
Sbjct: 261 AYGVVLWEIFS 271

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 26  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 134 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
           A + +
Sbjct: 270 AFETM 274

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 23  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 73  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 131 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 165 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 213
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 214 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 435 ALKPL 439
           A + +
Sbjct: 267 AFETM 271

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 4   EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 51
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L   +   L LP  + M 
Sbjct: 52  QEAQVMKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 109
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 110 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 140
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 141 LVCKVADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 200 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 243
Query: 421 RDPKARP 427
           ++P+ RP
Sbjct: 244 KEPEERP 250

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 228 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+R+    N L+                          +++  K++DFGL++   
Sbjct: 336 -KKNFIHRNLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 369
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 370 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 418
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 419 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
Query: 435 ALKPL 439
           A + +
Sbjct: 472 AFETM 476

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L+G C  +    ++ EFM  G+L ++L   +      +   + L  A  ++   E  
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 127
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           E+   I+RD    N L+                          +++  K++DFGL++   
Sbjct: 128 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
           A + +
Sbjct: 265 AFETM 269

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 23  LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 73  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 131 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 165 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 213
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 214 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 435 ALKPL 439
           A + +
Sbjct: 267 AFETM 271

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 118/316 (37%), Gaps = 62/316 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    L VAVK L        KE L +E+  +  L  H
Sbjct: 54  LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---------- 244
            N+V L+G C      L++ E+   G L N L R+S  L       IA            
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 245 ---AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
               A+G+AFL   A +  I+RD    N+LL                            +
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGH 201
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            AK+ DFGLA+D        V         + APE +     T +SDV+S+G++L E+  
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF- 260
Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
              S+  N             P +    +FY+L+    +        +    +   C + 
Sbjct: 261 ---SLGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 422 DPKARPLMSEVVEALK 437
           +P  RP   ++   L+
Sbjct: 307 EPTHRPTFQQICSFLQ 322

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 75/322 (23%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEV 186
           NFR E  +G G F  V++     +G         + VA+K +    L   K   + + E+
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDG---------VPVALKKVQIFDLMDAKARADCIKEI 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE---NHLFRRSLPLPWSIRMKIAL 243
           + L  L H N++K     IED++  +V E    G L     H  ++   +P     K  +
Sbjct: 84  DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                L  +H    R V++RD K +N+ + A      G  G     G FF++        
Sbjct: 144 QLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGL----GRFFSS-------- 188
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
                          KT  +  ++GT  Y +PE +       +SD++S G +L EM    
Sbjct: 189 ---------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM---- 229
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGHFSIKGAQKAAQLA 415
                              P  G++   Y L          P    H+S    ++  QL 
Sbjct: 230 --------------AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS----EELRQLV 271
Query: 416 AHCLSRDPKARPLMSEVVEALK 437
             C++ DP+ RP ++ V +  K
Sbjct: 272 NMCINPDPEKRPDVTYVYDVAK 293

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L E   
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
           +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M  A   
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 289
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A G+A++        ++RD + +NIL+        G+   C                 K+
Sbjct: 290 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 321
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ T  R 
Sbjct: 322 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                 N         R  L +  R YR+  P        +  +    L   C  ++P+ 
Sbjct: 381 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKEPEE 424
Query: 426 RP 427
           RP
Sbjct: 425 RP 426

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L E   
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
           +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M  A   
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 289
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A G+A++        ++RD + +NIL+        G+   C                 K+
Sbjct: 290 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 321
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ T  R 
Sbjct: 322 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                 N         R  L +  R YR+  P        +  +    L   C  ++P+ 
Sbjct: 381 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKEPEE 424
Query: 426 RP 427
           RP
Sbjct: 425 RP 426

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 118/316 (37%), Gaps = 62/316 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    L VAVK L        KE L +E+  +  L  H
Sbjct: 54  LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---------- 244
            N+V L+G C      L++ E+   G L N L R+S  L       IA            
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 245 ---AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
               A+G+AFL   A +  I+RD    N+LL                            +
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGH 201
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            AK+ DFGLA+D        V         + APE +     T +SDV+S+G++L E+  
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF- 260
Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
              S+  N             P +    +FY+L+    +        +    +   C + 
Sbjct: 261 ---SLGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 422 DPKARPLMSEVVEALK 437
           +P  RP   ++   L+
Sbjct: 307 EPTHRPTFQQICSFLQ 322

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 310
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L   +   L LP  + M 
Sbjct: 311 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 368
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+        G+   C              
Sbjct: 369 -AAQIASGMAYVERMN---YVHRDLRAANILV--------GENLVC-------------- 402
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 403 ---KVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 459 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 502
Query: 421 RDPKARP 427
           ++P+ RP
Sbjct: 503 KEPEERP 509

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 60/312 (19%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G  G V  G +   G   V       VA+K L     +  + ++L+E + +G  
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLA 250
            H N+++L G        ++V E+M  GSL+   F R+    ++I   + +  G   G+ 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +L +      ++RD    N+L+D+                    N++      K+SDFGL
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDS--------------------NLV-----CKVSDFGL 197
Query: 311 AK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           ++   D P+   T    ++     + APE +     +S SDV+SFGVV+ E+L       
Sbjct: 198 SRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
            N  N         R  +      YRL  P       +       QL   C  +D   RP
Sbjct: 256 WNMTN---------RDVISSVEEGYRLPAP-------MGCPHALHQLMLDCWHKDRAQRP 299
Query: 428 LMSEVVEALKPL 439
             S++V  L  L
Sbjct: 300 RFSQIVSVLDAL 311

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 50/244 (20%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
            TR+  PE        LG+G FG V+K   +E         T +  A K ++    +  +
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           +++ E++ L    H N+VKL+     ++   ++ EF   G+++  +     PL  S    
Sbjct: 80  DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +       L +LH   +  +I+RD K  NIL                            D
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------D 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
            + KL+DFG++       +   S   +GT  + APE VM      R     +DV+S G+ 
Sbjct: 172 GDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 356 LLEM 359
           L+EM
Sbjct: 230 LIEM 233

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 7   EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 54
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 55  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 112
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A   A G+A++        ++RD + +NIL+                          ++
Sbjct: 113 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 143
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 144 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 202
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 203 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 246
Query: 421 RDPKARP 427
           ++P+ RP
Sbjct: 247 KEPEERP 253

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L E   
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGNMSPEAFLQEAQV 233
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
           +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M  A   
Sbjct: 234 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 290
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A G+A++        ++RD + +NIL+        G+   C                 K+
Sbjct: 291 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 322
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFGL +   + + T           + APE  + G  T +SDV+SFG++L E+ T  R 
Sbjct: 323 ADFGLGRLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                 N         R  L +  R YR+  P        +  +    L   C  +DP+ 
Sbjct: 382 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEE 425
Query: 426 RP 427
           RP
Sbjct: 426 RP 427

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 50/244 (20%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
            TR+  PE        LG+G FG V+K   +E         T +  A K ++    +  +
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           +++ E++ L    H N+VKL+     ++   ++ EF   G+++  +     PL  S    
Sbjct: 80  DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +       L +LH   +  +I+RD K  NIL                            D
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------D 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
            + KL+DFG++       +   S   +GT  + APE VM      R     +DV+S G+ 
Sbjct: 172 GDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 356 LLEM 359
           L+EM
Sbjct: 230 LIEM 233

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 60/322 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G FG V  G ++  G   +       VA+KTL     +  + ++L+E + +G  
Sbjct: 12  EQVIGAGEFGEVCSGHLKLPGKREI------FVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N++ L G   +    +++ EFM  GSL++ L +          + +  G A G+ +L
Sbjct: 66  DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              A+   ++R     NIL+++                    N++      K+SDFGL++
Sbjct: 126 ---ADMNYVHRALAARNILVNS--------------------NLV-----CKVSDFGLSR 157
Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
              +       T  +G      + APE +     TS SDV+S+G+V+ E+++ G R    
Sbjct: 158 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 217
Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
                  N +E          + YRL  P       +       QL   C  +D   RP 
Sbjct: 218 MTNQDVINAIE----------QDYRLPPP-------MDCPSALHQLMLDCWQKDRNHRPK 260
Query: 429 MSEVVEALKPL---PN-LKDMA 446
             ++V  L  +   PN LK MA
Sbjct: 261 FGQIVNTLDKMIRNPNSLKAMA 282

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 60/312 (19%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G  G V  G +   G   V       VA+K L     +  + ++L+E + +G  
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLA 250
            H N+++L G        ++V E+M  GSL+   F R+    ++I   + +  G   G+ 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +L +      ++RD    N+L+D+                    N++      K+SDFGL
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDS--------------------NLV-----CKVSDFGL 197
Query: 311 AK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           ++   D P+   T    ++     + APE +     +S SDV+SFGVV+ E+L       
Sbjct: 198 SRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
            N  N         R  +      YRL  P       +       QL   C  +D   RP
Sbjct: 256 WNMTN---------RDVISSVEEGYRLPAP-------MGCPHALHQLMLDCWHKDRAQRP 299
Query: 428 LMSEVVEALKPL 439
             S++V  L  L
Sbjct: 300 RFSQIVSVLDAL 311

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 267 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+R+    N L+                          +++  K++DFGL++   
Sbjct: 375 -KKNFIHRNLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 408
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
            GD             + APE +     + +SDV++FGV+L E+ T   S          
Sbjct: 409 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 457
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P+ G +  + Y L++            +K  +L   C   +P  RP  +E+ +
Sbjct: 458 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
Query: 435 ALKPL 439
           A + +
Sbjct: 511 AFETM 515

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G FG V  G ++  G         L VA+KTL     +  + ++L E + +G  
Sbjct: 27  ERVIGAGEFGEVCSGRLKLPGKRE------LPVAIKTLKVGYTEKQRRDFLGEASIMGQF 80
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N++ L G   +    ++V E+M  GSL+  L +          + +  G + G+ +L
Sbjct: 81  DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              ++   ++RD    NIL+++                    N++      K+SDFGL++
Sbjct: 141 ---SDMGYVHRDLAARNILINS--------------------NLV-----CKVSDFGLSR 172
Query: 313 ---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
              D PE   T    ++     + APE +     TS SDV+S+G+V+ E+++        
Sbjct: 173 VLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY-----GE 225
Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
           RP  E       +  +      YRL  P       +       QL   C  ++  +RP  
Sbjct: 226 RPYWEMT----NQDVIKAVEEGYRLPSP-------MDCPAALYQLMLDCWQKERNSRPKF 274
Query: 430 SEVVEALKPL 439
            E+V  L  L
Sbjct: 275 DEIVNMLDKL 284

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L E   
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
           +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M  A   
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 289
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A G+A++        ++RD + +NIL+        G+   C                 K+
Sbjct: 290 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 321
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ T  R 
Sbjct: 322 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                 N         R  L +  R YR+  P        +  +    L   C  ++P+ 
Sbjct: 381 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKEPEE 424
Query: 426 RP 427
           RP
Sbjct: 425 RP 426

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 58
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 59  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
             +  A G+A++        ++RD + +NIL+                          ++
Sbjct: 118 AQI--ASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 147
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 148 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 207 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 250
Query: 421 RDPKARP 427
           ++P+ RP
Sbjct: 251 KEPEERP 257

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 41/236 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--EVN 187
           +F    +LG+G FG VF            +P +G   A+K L    L+         E +
Sbjct: 29  HFELLKVLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            L D+ H  +VKL  Y  + + +L L+ +F+  G L   L +  +     ++  +A   A
Sbjct: 83  ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELA 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            GL  LH      +IYRD K  NILLD                         ++ + KL+
Sbjct: 141 LGLDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIKLT 172
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           DFGL+K+  + +K   S    GT  Y APE V     +  +D +S+GV++ EMLTG
Sbjct: 173 DFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           ++   + R E  LG+G FG V+ G W   NGT          VA+KTL   G    + +L
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 58
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
            E   +  L H  LV+L    + ++   +V E+M +GSL + L     + L LP  + M 
Sbjct: 59  QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
             +  A G+A++        ++RD + +NIL+                          ++
Sbjct: 118 AQI--ASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 147
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K++DFGLA+   + + T           + APE  + G  T +SDV+SFG++L E+ 
Sbjct: 148 LVCKVADFGLARLIEDNEWT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           T  R       N         R  L +  R YR+  P        +  +    L   C  
Sbjct: 207 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 250
Query: 421 RDPKARP 427
           ++P+ RP
Sbjct: 251 KEPEERP 257

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 50/244 (20%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
            TR+  PE        LG+G FG V+K   +E         T +  A K ++    +  +
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           +++ E++ L    H N+VKL+     ++   ++ EF   G+++  +     PL  S    
Sbjct: 80  DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +       L +LH   +  +I+RD K  NIL                            D
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------D 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
            + KL+DFG++               +GT  + APE VM      R     +DV+S G+ 
Sbjct: 172 GDIKLADFGVSAKNTR--XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 356 LLEM 359
           L+EM
Sbjct: 230 LIEM 233

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 120/318 (37%), Gaps = 64/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    L VAVK L        KE L +E+  +  L  H
Sbjct: 54  LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
            N+V L+G C      L++ E+   G L N L R+  P L +S                +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             +   A+G+AFL   A +  I+RD    N+LL                           
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------N 201
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
            + AK+ DFGLA+D        V         + APE +     T +SDV+S+G++L E+
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
                S+  N             P +    +FY+L+    +        +    +   C 
Sbjct: 262 F----SLGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 306
Query: 420 SRDPKARPLMSEVVEALK 437
           + +P  RP   ++   L+
Sbjct: 307 ALEPTHRPTFQQICSFLQ 324

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 26  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 82  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 26  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 82  LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 123/306 (40%), Gaps = 62/306 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VAVK +  +G     E+  E   +  L H  
Sbjct: 16  LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LVK  G C ++    +V E++  G L N+L      L  S  +++     +G+AFL    
Sbjct: 65  LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               I+RD    N L+D                         +D   K+SDFG+ +    
Sbjct: 125 ---FIHRDLAARNCLVD-------------------------RDLCVKVSDFGMTRYVL- 155
Query: 317 GDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
            D  +VS+  +GT     ++APE       +S+SDV++FG+++ E+ +  +       N 
Sbjct: 156 -DDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS 212
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
           E  L       + +  R YR   P L        +    Q+   C    P+ RP   +++
Sbjct: 213 EVVL------KVSQGHRLYR---PHL-------ASDTIYQIMYSCWHELPEKRPTFQQLL 256
Query: 434 EALKPL 439
            +++PL
Sbjct: 257 SSIEPL 262

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
           +LGEG FG V++G    +       G  + VAVKT   D    +KE +++E   + +L H
Sbjct: 19  ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            ++VKLIG  IE++   ++ E  P G L ++L R    L     +  +L   K +A+L  
Sbjct: 73  PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                 ++RD    NIL+ +                             KL DFGL++  
Sbjct: 132 IN---CVHRDIAVRNILVASPEC-------------------------VKLGDFGLSRYI 163
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
            + D    S   +    + +PE +     T+ SDV+ F V + E+L    S  K      
Sbjct: 164 EDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEIL----SFGKQPFFWL 218
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     +  +G   +  RL  P L              L   C   DP  RP  +E+V 
Sbjct: 219 EN-----KDVIGVLEKGDRLPKPDL-------CPPVLYTLMTRCWDYDPSDRPRFTELVC 266
Query: 435 ALKPLPNL-KDMA 446
           +L  +  + KD+A
Sbjct: 267 SLSDVYQMEKDIA 279

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
           +LGEG FG V++G    +       G  + VAVKT   D    +KE +++E   + +L H
Sbjct: 31  ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            ++VKLIG  IE++   ++ E  P G L ++L R    L     +  +L   K +A+L  
Sbjct: 85  PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                 ++RD    NIL+ +                             KL DFGL++  
Sbjct: 144 IN---CVHRDIAVRNILVASPEC-------------------------VKLGDFGLSRYI 175
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
            + D    S   +    + +PE +     T+ SDV+ F V + E+L    S  K      
Sbjct: 176 EDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEIL----SFGKQPFFWL 230
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     +  +G   +  RL  P L              L   C   DP  RP  +E+V 
Sbjct: 231 EN-----KDVIGVLEKGDRLPKPDL-------CPPVLYTLMTRCWDYDPSDRPRFTELVC 278
Query: 435 ALKPLPNL-KDMA 446
           +L  +  + KD+A
Sbjct: 279 SLSDVYQMEKDIA 291

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
           +LGEG FG V++G    +       G  + VAVKT   D    +KE +++E   + +L H
Sbjct: 15  ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            ++VKLIG  IE++   ++ E  P G L ++L R    L     +  +L   K +A+L  
Sbjct: 69  PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                 ++RD    NIL+ +                             KL DFGL++  
Sbjct: 128 IN---CVHRDIAVRNILVASPEC-------------------------VKLGDFGLSRYI 159
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
            + D    S   +    + +PE +     T+ SDV+ F V + E+L    S  K      
Sbjct: 160 EDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEIL----SFGKQPFFWL 214
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     +  +G   +  RL  P L              L   C   DP  RP  +E+V 
Sbjct: 215 EN-----KDVIGVLEKGDRLPKPDL-------CPPVLYTLMTRCWDYDPSDRPRFTELVC 262
Query: 435 ALKPLPNL-KDMA 446
           +L  +  + KD+A
Sbjct: 263 SLSDVYQMEKDIA 275

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 182
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 243 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 287
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           L  +  +    +G+G FG V  G              G  VAVK + +D     + +LAE
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAE 236
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
            + +  L H NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L
Sbjct: 237 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 296
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              + + +L        ++RD    N+L+                          +D  A
Sbjct: 297 DVCEAMEYLEGNN---FVHRDLAARNVLVS-------------------------EDNVA 328
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           K+SDFGL K+         ST+  G     + APE +     +++SDV+SFG++L E+
Sbjct: 329 KVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 26  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 82  LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 48/236 (20%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           L  +  +    +G+G FG V  G    N            VAVK + +D     + +LAE
Sbjct: 9   LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
            + +  L H NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L
Sbjct: 56  ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 115
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              + + +L        ++RD    N+L+                          +D  A
Sbjct: 116 DVCEAMEYLEGNN---FVHRDLAARNVLVS-------------------------EDNVA 147
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           K+SDFGL K   E   T  + ++     + APE +     +++SDV+SFG++L E+
Sbjct: 148 KVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSFGILLWEI 198

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 26  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 82  LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           L  +  +    +G+G FG V  G    N            VAVK + +D     + +LAE
Sbjct: 18  LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAE 64
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
            + +  L H NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L
Sbjct: 65  ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              + + +L        ++RD    N+L+                          +D  A
Sbjct: 125 DVCEAMEYLE---GNNFVHRDLAARNVLVS-------------------------EDNVA 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           K+SDFGL K+         ST+  G     + APE +     +++SDV+SFG++L E+
Sbjct: 157 KVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 182
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 183 EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 243 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 287
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           L  +  +    +G+G FG V  G              G  VAVK + +D     + +LAE
Sbjct: 3   LNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAE 49
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
            + +  L H NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L
Sbjct: 50  ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 109
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              + + +L        ++RD    N+L+                          +D  A
Sbjct: 110 DVCEAMEYLEGNN---FVHRDLAARNVLVS-------------------------EDNVA 141
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           K+SDFGL K+         ST+  G     + APE +     +++SDV+SFG++L E+
Sbjct: 142 KVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 121/316 (38%), Gaps = 63/316 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 37  LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR------------MK 240
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+               + 
Sbjct: 93  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            +   AKG+ FL   A R  I+RD    NILL                            
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV----------------------- 186
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E+ 
Sbjct: 187 --VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
           +   S     P  + +     R   G R R      P +             Q    C  
Sbjct: 245 SLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWH 289
Query: 421 RDPKARPLMSEVVEAL 436
            +P  RP  SE+VE L
Sbjct: 290 GEPSQRPTFSELVEHL 305

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 121/317 (38%), Gaps = 64/317 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 36  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMKI----------- 241
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+     +           
Sbjct: 92  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 242 --ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             +   AKG+ FL   A R  I+RD    NILL                           
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV---------------------- 186
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
               K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E+
Sbjct: 187 ---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
            +   S     P  + +     R   G R R      P +             Q    C 
Sbjct: 244 FSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCW 288
Query: 420 SRDPKARPLMSEVVEAL 436
             +P  RP  SE+VE L
Sbjct: 289 HGEPSQRPTFSELVEHL 305

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAE 185
           ++  F+    LG G +  V+KG         +   TG+ VA+K +  D  +G     + E
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIRE 53
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIA-- 242
           ++ + +L H N+V+L      +++  LV+EFM    L+ ++  R++   P  + + +   
Sbjct: 54  ISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 243 --LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GLAF HE     +++RD K  N+L++       G FG    +G+  N      
Sbjct: 113 FQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF---- 165
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEM 359
                                 S+ V+ T  Y AP+ +M     S S D++S G +L EM
Sbjct: 166 ----------------------SSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Query: 360 LTGR 363
           +TG+
Sbjct: 203 ITGK 206

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 182
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 243 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 287
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 121/314 (38%), Gaps = 61/314 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 242
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+    K           +
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
              AKG+ FL   A R  I+RD    NILL                              
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV------------------------- 182
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E+ + 
Sbjct: 183 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
             S     P  + +     R   G R R      P +             Q    C   +
Sbjct: 243 GAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGE 287
Query: 423 PKARPLMSEVVEAL 436
           P  RP  SE+VE L
Sbjct: 288 PSQRPTFSELVEHL 301

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 123/316 (38%), Gaps = 55/316 (17%)
Query: 114 SRLRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
           +R  ++ + + +  T+N FR   +LG+GGFG V    +   G              K   
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSL 231
                  K+ L +VN          V  + Y  E  D   LV   M  G L+ H++    
Sbjct: 228 EAMALNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 232 P-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
              P +  +  A     GL  LH E    ++YRD K  NILLD     ++G         
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLD-----DHG--------- 323
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                      + ++SD GLA   PEG    +  RV GT GY APE V     T   D +
Sbjct: 324 -----------HIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWW 369
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           + G +L EM+ G+    + +   +   VE             RL+    E  +S + + +
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVE-------------RLVKEVPE-EYSERFSPQ 415
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L +DP  R
Sbjct: 416 ARSLCSQLLCKDPAER 431

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 72  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+ +               
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +  +   AKG+ FL   A R  I+RD    NILL                          
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 219
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +    K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E
Sbjct: 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           + +   S     P  + +     R   G R R      P +             Q    C
Sbjct: 280 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 324
Query: 419 LSRDPKARPLMSEVVEAL 436
              +P  RP  SE+VE L
Sbjct: 325 WHGEPSQRPTFSELVEHL 342

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 123/316 (38%), Gaps = 55/316 (17%)
Query: 114 SRLRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
           +R  ++ + + +  T+N FR   +LG+GGFG V    +   G              K   
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSL 231
                  K+ L +VN          V  + Y  E  D   LV   M  G L+ H++    
Sbjct: 228 EAMALNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 232 P-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
              P +  +  A     GL  LH E    ++YRD K  NILLD     ++G         
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLD-----DHG--------- 323
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                      + ++SD GLA   PEG    +  RV GT GY APE V     T   D +
Sbjct: 324 -----------HIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWW 369
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           + G +L EM+ G+    + +   +   VE             RL+    E  +S + + +
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVE-------------RLVKEVPE-EYSERFSPQ 415
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L +DP  R
Sbjct: 416 ARSLCSQLLCKDPAER 431

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 121/314 (38%), Gaps = 61/314 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 242
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+    K           +
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
              AKG+ FL   A R  I+RD    NILL                              
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV------------------------- 182
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L E+ + 
Sbjct: 183 VKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
             S     P  + +     R   G R R      P +             Q    C   +
Sbjct: 243 GAS---PYPGVKIDEEFXRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGE 287
Query: 423 PKARPLMSEVVEAL 436
           P  RP  SE+VE L
Sbjct: 288 PSQRPTFSELVEHL 301

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V+ G         V     LTVAVKTL  D ++  +E+L E   + ++ H N
Sbjct: 40  LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    +V E+MP G+L ++L   +   +   + + +A   +  + +L   
Sbjct: 90  LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 148 -KKNFIHRDLAARNCLVG-------------------------ENHVVKVADFGLSRLMT 181
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
            GD             + APE +     + +SDV++FGV+L E+ T G         +  
Sbjct: 182 -GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 240
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
           ++L+E          + YR+  P  EG        K  +L   C    P  RP  +E  +
Sbjct: 241 YDLLE----------KGYRMEQP--EG-----CPPKVYELMRACWKWSPADRPSFAETHQ 283
Query: 435 ALKPL 439
           A + +
Sbjct: 284 AFETM 288

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 29/304 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
           LG G FG V    +E       K    L VAVK L        KE L +E+  +  L  H
Sbjct: 39  LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+V L+G C      L++ E+   G L N L R++  +     +  +L   +    L +
Sbjct: 95  ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAM-----LGPSLAPGQDPEGLDK 149
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD-YNAKLSDFGLAKD 313
           E  RP+  RD    +      +   +     CI+  +   N+L  + + AK+ DFGLA+D
Sbjct: 150 EDGRPLELRDL--LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
                   V         + APE +     T +SDV+S+G++L E+     S+  N    
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN---- 259
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
                    P +    +FY+L+    +        +    +   C + +P  RP   ++ 
Sbjct: 260 -------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
Query: 434 EALK 437
             L+
Sbjct: 313 SFLQ 316

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
           LN+V L+G C +    L+V  EF   G+L  +L                FR+      ++
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 150
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
           P+    R+                 K L+ + EE     +Y+DF T   L+       + 
Sbjct: 151 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 210
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
             +     CI+  L   N+L  + N  K+ DFGLA+D  +               + APE
Sbjct: 211 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 270
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T +SDV+SFGV+L E+ +   S     P  + +     R   G R R      
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 327
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
           P +             Q    C   +P  RP  SE+VE L
Sbjct: 328 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 355

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 40/235 (17%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFL 189
            + E ++G G FG V  G ++  G   +       VA+KTL      +  +++L+E + +
Sbjct: 16  IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
           G   H N++ L G   +    +++ E+M  GSL+  L +          + +  G   G+
Sbjct: 70  GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +L   ++   ++RD    NIL+++                    N++      K+SDFG
Sbjct: 130 KYL---SDMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFG 161
Query: 310 LAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +++   D PE   T    ++     + APE +     TS SDV+S+G+V+ E+++
Sbjct: 162 MSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 117/320 (36%), Gaps = 69/320 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 37  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLVY------------------EFMPRGSLENHLFRRSLPLPWS 236
           LN+V L+G C +    L+V                   EF+P       L++  L L   
Sbjct: 93  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           I    +   AKG+ FL   A R  I+RD    NILL                        
Sbjct: 153 I--CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV------------------- 188
Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
                  K+ DFGLA+D  +               + APE +     T +SDV+SFGV+L
Sbjct: 189 ------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 242
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
            E+ +   S     P  + +     R   G R R      P +             Q   
Sbjct: 243 WEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTML 287
Query: 417 HCLSRDPKARPLMSEVVEAL 436
            C   +P  RP  SE+VE L
Sbjct: 288 DCWHGEPSQRPTFSELVEHL 307

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 37  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
           LN+V L+G C +    L+V  EF   G+L  +L                FR+      ++
Sbjct: 93  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 152
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
           P+    R+                 K L+ + EE     +Y+DF T   L+       + 
Sbjct: 153 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 212
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
             +     CI+  L   N+L  + N  K+ DFGLA+D  +               + APE
Sbjct: 213 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T +SDV+SFGV+L E+ +   S     P  + +     R   G R R      
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 329
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
           P +             Q    C   +P  RP  SE+VE L
Sbjct: 330 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 357

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 30  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
           LN+V L+G C +    L+V  EF   G+L  +L                FR+      ++
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
           P+    R+                 K L+ + EE     +Y+DF T   L+       + 
Sbjct: 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 205
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
             +     CI+  L   N+L  + N  K+ DFGLA+D  +               + APE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T +SDV+SFGV+L E+ +   S     P  + +     R   G R R      
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 322
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
           P +             Q    C   +P  RP  SE+VE L
Sbjct: 323 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 350

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 40/235 (17%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFL 189
            + E ++G G FG V  G ++  G   +       VA+KTL      +  +++L+E + +
Sbjct: 10  IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
           G   H N++ L G   +    +++ E+M  GSL+  L +          + +  G   G+
Sbjct: 64  GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +L   ++   ++RD    NIL+++                    N++      K+SDFG
Sbjct: 124 KYL---SDMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFG 155
Query: 310 LAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           +++   D PE   T    ++     + APE +     TS SDV+S+G+V+ E+++
Sbjct: 156 MSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 135/344 (39%), Gaps = 60/344 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    ++ +     K  T  TVAVK L        +K  + E+  L  +  H
Sbjct: 35  LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPL----------PWSIRMKIA 242
           LN+V L+G C +    L+V  E+   G+L N+L  +R L            P   +M+  
Sbjct: 91  LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPG 150
Query: 243 LGAAK----------------------GLAFLHEEAERPVIYRDFKTSNILL----DAVR 276
           L   K                       L+ + EE +    Y++  T   L+       R
Sbjct: 151 LEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVAR 210
Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 335
              +     CI+  L   N+L  + N  K+ DFGLA+D  +               + AP
Sbjct: 211 GMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP 270
Query: 336 EYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI 395
           E +     +++SDV+S+GV+L E+ +   S     P  + +    +R   G R R     
Sbjct: 271 ESIFDKIYSTKSDVWSYGVLLWEIFSLGGS---PYPGVQMDEDFCSRLREGMRMRAPEYS 327
Query: 396 DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
            P +             Q+   C  RDPK RP  +E+VE L  L
Sbjct: 328 TPEI------------YQIMLDCWHRDPKERPRFAELVEKLGDL 359

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 48/266 (18%)
Query: 105 KLEE-ELKVASRLRKFTFNDLK-----LATRNFRPESLLGEGGFGCVFKGWIEENGTAPV 158
           KLEE EL    R R   F   K     L   +F   S LG G  G VFK           
Sbjct: 3   KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSH 54
Query: 159 KPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFM 217
           KP +GL +A K ++ +     + + + E+  L +     +V   G    D +  +  E M
Sbjct: 55  KP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
             GSL + + +++  +P  I  K+++   KGL +L E+ +  +++RD K SNIL+++ R 
Sbjct: 114 DGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RG 169
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 337
           E                         KL DFG++    +     ++   +GT  Y +PE 
Sbjct: 170 E------------------------IKLCDFGVSGQLIDS----MANSFVGTRSYMSPER 201
Query: 338 VMTGHLTSRSDVYSFGVVLLEMLTGR 363
           +   H + +SD++S G+ L+EM  GR
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
           ++L   +F   S LG G  G VFK           KP +GL +A K ++ +     + + 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + E+  L +     +V   G    D +  +  E M  GSL + + +++  +P  I  K++
Sbjct: 52  IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   KGL +L E+ +  +++RD K SNIL+++ R E                        
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG++    +     ++   +GT  Y +PE +   H + +SD++S G+ L+EM  G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
           R
Sbjct: 200 R 200

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 13  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 67  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 126 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 157
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 16  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 70  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 129 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 160
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 14  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 68  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 15  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 69  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 37  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 90
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 91  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 150 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 181
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 22  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 75
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 76  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 135 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 166
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 18  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 71
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 72  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 130
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 131 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 162
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
           ++L   +F   S LG G  G VFK           KP +GL +A K ++ +     + + 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + E+  L +     +V   G    D +  +  E M  GSL + + +++  +P  I  K++
Sbjct: 52  IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   KGL +L E+ +  +++RD K SNIL+++ R E                        
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG++    +     ++   +GT  Y +PE +   H + +SD++S G+ L+EM  G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
           R
Sbjct: 200 R 200

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
           LG G FG V    IE +     K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 28  LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 83
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
           LN+V L+G C +    L+V  EF   G+L  +L                FR+      ++
Sbjct: 84  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 143
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
           P+    R+                 K L+ + EE     +Y+DF T   L+       + 
Sbjct: 144 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 203
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
             +     CI+  L   N+L  + N  K+ DFGLA+D  +               + APE
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T +SDV+SFGV+L E+ +   S     P  + +     R   G R R      
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 320
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
           P +             Q    C   +P  RP  SE+VE L
Sbjct: 321 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 348

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 45/253 (17%)
Query: 115 RLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           RL  F     K   L   +F   S LG G  G VFK           KP +GL +A K +
Sbjct: 51  RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLI 101
Query: 172 NHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
           + +     + + + E+  L +     +V   G    D +  +  E M  GSL + + +++
Sbjct: 102 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKA 160
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
             +P  I  K+++   KGL +L E+ +  +++RD K SNIL+++ R E            
Sbjct: 161 GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------ 205
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        KL DFG++    +     ++   +GT  Y +PE +   H + +SD++
Sbjct: 206 ------------IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 351 SFGVVLLEMLTGR 363
           S G+ L+EM  GR
Sbjct: 250 SMGLSLVEMAVGR 262

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 42/240 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           +L   +F   S LG G  G VFK           KP +GL +A K ++ +     + + +
Sbjct: 5   ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQII 55
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E+  L +     +V   G    D +  +  E M  GSL + + +++  +P  I  K+++
Sbjct: 56  RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 114
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
              KGL +L E+ +  +++RD K SNIL+++ R E                         
Sbjct: 115 AVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------I 147
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           KL DFG++  G   D+  ++   +GT  Y +PE +   H + +SD++S G+ L+EM  GR
Sbjct: 148 KLCDFGVS--GQLIDE--MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
           ++L   +F   S LG G  G VFK           KP +GL +A K ++ +     + + 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + E+  L +     +V   G    D +  +  E M  GSL + + +++  +P  I  K++
Sbjct: 52  IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   KGL +L E+ +  +++RD K SNIL+++ R E                        
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG++    +     ++   +GT  Y +PE +   H + +SD++S G+ L+EM  G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
           R
Sbjct: 200 R 200

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 13  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 67  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 126 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 157
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 19  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 73  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 45/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   N T          VAVKTL   G    + +L E N +  L H  
Sbjct: 21  LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLH 253
           LV+L      ++   ++ E+M +GSL + L       + LP  I     +  A+G+A++ 
Sbjct: 70  LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 127
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               +  I+RD + +N+L+                          +    K++DFGLA+ 
Sbjct: 128 R---KNYIHRDLRAANVLVS-------------------------ESLMCKIADFGLARV 159
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             + + T           + APE +  G  T +SDV+SFG++L E++T
Sbjct: 160 IEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
           ++L   +F   S LG G  G VFK           KP +GL +A K ++ +     + + 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + E+  L +     +V   G    D +  +  E M  GSL + + +++  +P  I  K++
Sbjct: 52  IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   KGL +L E+ +  +++RD K SNIL+++ R E                        
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG++    +     ++   +GT  Y +PE +   H + +SD++S G+ L+EM  G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
           R
Sbjct: 200 R 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
           ++L   +F   S LG G  G VFK           KP +GL +A K ++ +     + + 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + E+  L +     +V   G    D +  +  E M  GSL + + +++  +P  I  K++
Sbjct: 52  IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   KGL +L E+ +  +++RD K SNIL+++ R E                        
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG++    +     ++   +GT  Y +PE +   H + +SD++S G+ L+EM  G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
           R
Sbjct: 200 R 200

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 15  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 69  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 40/227 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           +G G FG VF G +  + T          VAVK+         K ++L E   L    H 
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V+LIG C +     +V E +  G                            L FL  E
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDF--------------------------LTFLRTE 206
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDG 314
             R    R      ++ DA     Y +   CI+  L   N L  + N  K+SDFG++++ 
Sbjct: 207 GAR---LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE 263
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            +G              + APE +  G  +S SDV+SFG++L E  +
Sbjct: 264 ADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 45/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V+ G+   N T          VAVKTL   G    + +L E N +  L H  
Sbjct: 20  LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLH 253
           LV+L     +++   ++ EFM +GSL + L       + LP  I     +  A+G+A++ 
Sbjct: 69  LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 126
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               +  I+RD + +N+L+                          +    K++DFGLA+ 
Sbjct: 127 ---RKNYIHRDLRAANVLVS-------------------------ESLMCKIADFGLARV 158
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             + + T           + APE +  G  T +S+V+SFG++L E++T
Sbjct: 159 IEDNEYT-AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 15  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 69  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 15  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 69  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 14  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 68  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 45/258 (17%)
Query: 110 LKVASRLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           L+   RL  F     K   L   +F   S LG G  G VFK           KP +GL +
Sbjct: 3   LQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVM 53
Query: 167 AVKTLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 225
           A K ++ +     + + + E+  L +     +V   G    D +  +  E M  GSL + 
Sbjct: 54  ARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQ 112
Query: 226 LFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
           + +++  +P  I  K+++   KGL +L E+ +  +++RD K SNIL+++ R E       
Sbjct: 113 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------- 162
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                             KL DFG++    +     ++   +GT  Y +PE +   H + 
Sbjct: 163 -----------------IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSV 201
Query: 346 RSDVYSFGVVLLEMLTGR 363
           +SD++S G+ L+EM  GR
Sbjct: 202 QSDIWSMGLSLVEMAVGR 219

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 6   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 59
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 60  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 119 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 150
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 140/387 (36%), Gaps = 82/387 (21%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           +KL   +F    +LG+G FG VF    ++         T    A+K L  D +    +  
Sbjct: 13  IKLKIEDFELHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 61
Query: 184 AEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
            E   +   V      H  L  +       +    V E++  G L  H+ +       S 
Sbjct: 62  VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSR 120
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
               A     GL FLH +    ++YRD K  NILLD                        
Sbjct: 121 ATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD------------------------ 153
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
            +D + K++DFG+ K+   GD    +    GT  Y APE ++        D +SFGV+L 
Sbjct: 154 -KDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 210
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ-LAA 416
           EML G+        +G+            E   F+ +   R++  F  +  +K A+ L  
Sbjct: 211 EMLIGQSPF-----HGQ-----------DEEELFHSI---RMDNPFYPRWLEKEAKDLLV 251
Query: 417 HCLSRDPKAR----------PLMSEV----VEALKPLPNLKDMASSSYYFQTMQAERIGS 462
               R+P+ R          PL  E+    +E  +  P  +    S +       E +  
Sbjct: 252 KLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNE 311
Query: 463 SPNTRNGIRAQGGSLSRNGQRSLSIPN 489
            P      RA   S+ +N  R+    N
Sbjct: 312 KPRLXFADRALINSMDQNMFRNFXFMN 338

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 40/227 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           +G G FG VF G +  + T          VAVK+         K ++L E   L    H 
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V+LIG C +     +V E +  G                            L FL  E
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDF--------------------------LTFLRTE 206
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDG 314
             R    R      ++ DA     Y +   CI+  L   N L  + N  K+SDFG++++ 
Sbjct: 207 GAR---LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE 263
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            +G              + APE +  G  +S SDV+SFG++L E  +
Sbjct: 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 56/272 (20%)
Query: 109 ELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
           E+ + ++ ++    ++ L+   F  E  LGE  FG V+KG +   G AP +      VA+
Sbjct: 8   EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAI 61
Query: 169 KTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL 226
           KTL  D  +G   +E+  E      L H N+V L+G   +D    +++ +   G L   L
Sbjct: 62  KTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
Query: 227 FRRS-----------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
             RS                 L  P  + +   + A  G+ +L   +   V+++D  T N
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRN 175
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
           +L                         ++   N K+SD GL ++    D   +    +  
Sbjct: 176 VL-------------------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             + APE +M G  +  SD++S+GVVL E+ +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
            F    +LG+G FG VF   +++   +  +    + V     +K  +    +  ++ L E
Sbjct: 25  QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           VN      H  +VKL  Y  + + +L L+ +F+  G L   L +  +     ++  +A  
Sbjct: 83  VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A  L  LH      +IYRD K  NILLD                         ++ + K
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIK 166
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           L+DFGL+K+  + +K   S    GT  Y APE V     T  +D +SFGV++ EMLTG
Sbjct: 167 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 44/240 (18%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGT--APVKPGTGLTVAVKTLNHDGLQGHKEW 182
           K + ++F+    LG G FG V       NG   A       + V +K + H         
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
             E   L  + H  ++++ G   +  Q  ++ +++  G L + L R+S   P  +    A
Sbjct: 55  -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYA 112
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
                 L +LH    + +IYRD K  NILLD                         ++ +
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLD-------------------------KNGH 144
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K++DFG AK  P+     V+  + GT  Y APE V T       D +SFG+++ EML G
Sbjct: 145 IKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 64/253 (25%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           LGEG FG V K       TA    G     TVAVK L  +      ++ L+E N L  + 
Sbjct: 31  LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
           H +++KL G C +D   LL+ E+   GSL                          +H   
Sbjct: 85  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
           R+L +     +  A   ++G+ +L   AE  +++RD    NIL+   R            
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR------------ 187
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K+SDFGL++D  E D     ++      + A E +     T++SD
Sbjct: 188 -------------KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 349 VYSFGVVLLEMLT 361
           V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 64/253 (25%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           LGEG FG V K       TA    G     TVAVK L  +      ++ L+E N L  + 
Sbjct: 31  LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
           H +++KL G C +D   LL+ E+   GSL                          +H   
Sbjct: 85  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
           R+L +     +  A   ++G+ +L   AE  +++RD    NIL+   R            
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGR------------ 187
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K+SDFGL++D  E D     ++      + A E +     T++SD
Sbjct: 188 -------------KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 349 VYSFGVVLLEMLT 361
           V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
            F    +LG+G FG VF   +++   +  +    + V     +K  +    +  ++ L E
Sbjct: 25  QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           VN      H  +VKL  Y  + + +L L+ +F+  G L   L +  +     ++  +A  
Sbjct: 83  VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A  L  LH      +IYRD K  NILLD                         ++ + K
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIK 166
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           L+DFGL+K+  + +K   S    GT  Y APE V     T  +D +SFGV++ EMLTG
Sbjct: 167 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 41/227 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG +G V+K   +E         TG  VA+K +  +     +E + E++ +      +
Sbjct: 37  LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +VK  G   ++    +V E+   GS+ + +  R+  L       I     KGL +LH   
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
           +   I+RD K  NILL+                          + +AKL+DFG+A  G  
Sbjct: 146 K---IHRDIKAGNILLNT-------------------------EGHAKLADFGVA--GQL 175
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
            D       V+GT  + APE +        +D++S G+  +EM  G+
Sbjct: 176 TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
            F    +LG+G FG VF   +++   +  +    + V     +K  +    +  ++ L E
Sbjct: 26  QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           VN      H  +VKL  Y  + + +L L+ +F+  G L   L +  +     ++  +A  
Sbjct: 84  VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 135
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A  L  LH      +IYRD K  NILLD                         ++ + K
Sbjct: 136 LALALDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIK 167
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           L+DFGL+K+  + +K   S    GT  Y APE V     T  +D +SFGV++ EMLTG
Sbjct: 168 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWL 183
           L     R   +LG G FG V+KG WI      P      + VA+K L  +   + +KE L
Sbjct: 14  LKETELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  +    + +L+G C+    +L V + MP G L +H+      L     +   +
Sbjct: 68  DEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCM 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+++L +     +++RD    N+L   V++ N+                       
Sbjct: 127 QIAKGMSYLEDVR---LVHRDLAARNVL---VKSPNH----------------------V 158
Query: 304 KLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLA+  D  E +      +V     + A E ++    T +SDV+S+GV + E++T
Sbjct: 159 KITDFGLARLLDIDETEYHADGGKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 64/253 (25%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           LGEG FG V K       TA    G     TVAVK L  +      ++ L+E N L  + 
Sbjct: 31  LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
           H +++KL G C +D   LL+ E+   GSL                          +H   
Sbjct: 85  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
           R+L +     +  A   ++G+ +L   AE  +++RD    NIL+   R            
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR------------ 187
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K+SDFGL++D  E D     ++      + A E +     T++SD
Sbjct: 188 -------------KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 349 VYSFGVVLLEMLT 361
           V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 14  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 68  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFG AK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 140/387 (36%), Gaps = 82/387 (21%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           +KL   +F    +LG+G FG VF    ++         T    A+K L  D +    +  
Sbjct: 12  IKLKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 60
Query: 184 AEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
            E   +   V      H  L  +       +    V E++  G L  H+ +       S 
Sbjct: 61  VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSR 119
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
               A     GL FLH +    ++YRD K  NILLD                        
Sbjct: 120 ATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD------------------------ 152
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
            +D + K++DFG+ K+   GD    +    GT  Y APE ++        D +SFGV+L 
Sbjct: 153 -KDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ-LAA 416
           EML G+        +G+            E   F+ +   R++  F  +  +K A+ L  
Sbjct: 210 EMLIGQSPF-----HGQ-----------DEEELFHSI---RMDNPFYPRWLEKEAKDLLV 250
Query: 417 HCLSRDPKAR----------PLMSEV----VEALKPLPNLKDMASSSYYFQTMQAERIGS 462
               R+P+ R          PL  E+    +E  +  P  +    S +       E +  
Sbjct: 251 KLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNE 310
Query: 463 SPNTRNGIRAQGGSLSRNGQRSLSIPN 489
            P      RA   S+ +N  R+    N
Sbjct: 311 KPRLSFADRALINSMDQNMFRNFXFMN 337

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           LG GGFG V + WI ++        TG  VA+K    +    ++E W  E+  +  L H 
Sbjct: 22  LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 196 NLVKL------IGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAK 247
           N+V        +     +D  LL  E+   G L  +L  F     L       +    + 
Sbjct: 73  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
            L +LHE     +I+RD K  NI+L        G                 Q    K+ D
Sbjct: 133 ALRYLHENR---IIHRDLKPENIVLQP------GP----------------QRLIHKIID 167
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
            G AK   E D+  + T  +GT  Y APE +     T   D +SFG +  E +TG R
Sbjct: 168 LGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           LG GGFG V + WI ++        TG  VA+K    +    ++E W  E+  +  L H 
Sbjct: 23  LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 196 NLVKL------IGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAK 247
           N+V        +     +D  LL  E+   G L  +L  F     L       +    + 
Sbjct: 74  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
            L +LHE     +I+RD K  NI+L        G                 Q    K+ D
Sbjct: 134 ALRYLHENR---IIHRDLKPENIVLQP------GP----------------QRLIHKIID 168
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
            G AK   E D+  + T  +GT  Y APE +     T   D +SFG +  E +TG R
Sbjct: 169 LGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +L  G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 19  LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 73  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 117/318 (36%), Gaps = 75/318 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTA--PVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL 192
           +LG G FG V       N TA    K G  + VAVK L        +E L +E+  +  L
Sbjct: 52  VLGSGAFGKVM------NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 193 -VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP------------------- 232
             H N+V L+G C       L++E+   G L N+L  +                      
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 233 ---LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
              L +   +  A   AKG+ FL     +  ++RD    N+L+       +GK       
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLV------THGKV------ 210
Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
                         K+ DFGLA+D        V         + APE +  G  T +SDV
Sbjct: 211 -------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV 257
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ 409
           +S+G++L E+     S+  N             P +     FY+LI    +        +
Sbjct: 258 WSYGILLWEIF----SLGVN-----------PYPGIPVDANFYKLIQNGFKMDQPFYATE 302
Query: 410 KAAQLAAHCLSRDPKARP 427
           +   +   C + D + RP
Sbjct: 303 EIYIIMQSCWAFDSRKRP 320

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 9   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 62
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 63  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A+G+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 122 QIAEGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 153
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG VFKG   +N T  V       VA+K ++  +     ++   E+  L      
Sbjct: 30  IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + K  G  ++D +  ++ E++  GS  + L     PL  +    I     KGL +LH E
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 138
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL       +G+                     KL+DFG+A  G 
Sbjct: 139 KK---IHRDIKAANVLLS-----EHGE--------------------VKLADFGVA--GQ 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +      S++D++S G+  +E+  G     +  P    
Sbjct: 169 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 228
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            L+    P             P LEG++S    +   +    CL+++P  RP   E+++
Sbjct: 229 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG VFKG   +N T  V       VA+K ++  +     ++   E+  L      
Sbjct: 15  IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + K  G  ++D +  ++ E++  GS  + L     PL  +    I     KGL +LH E
Sbjct: 66  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL       +G+                     KL+DFG+A  G 
Sbjct: 124 KK---IHRDIKAANVLLS-----EHGE--------------------VKLADFGVA--GQ 153
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +      S++D++S G+  +E+  G     +  P    
Sbjct: 154 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 213
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            L+    P             P LEG++S    +   +    CL+++P  RP   E+++
Sbjct: 214 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +L  G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 19  LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 73  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 129 RNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKE 181
           ++  PE L      +G+G FG VFKG   +N T  V       VA+K ++  +     ++
Sbjct: 21  QSMDPEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIED 71
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
              E+  L       + K  G  ++D +  ++ E++  GS  + L     PL  +    I
Sbjct: 72  IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 129
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                KGL +LH E +   I+RD K +N+LL       +G+                   
Sbjct: 130 LREILKGLDYLHSEKK---IHRDIKAANVLLS-----EHGE------------------- 162
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             KL+DFG+A  G   D        +GT  + APE +      S++D++S G+  +E+  
Sbjct: 163 -VKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 219
Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
           G     +  P     L+    P             P LEG++S    +   +    CL++
Sbjct: 220 GEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNK 262
Query: 422 DPKARPLMSEVVE 434
           +P  RP   E+++
Sbjct: 263 EPSFRPTAKELLK 275

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 14  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 68  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFG AK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 14  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 68  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFG AK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 11  NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 60  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 150
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 151 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG VFKG   +N T  V       VA+K ++  +     ++   E+  L      
Sbjct: 15  IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + K  G  ++D +  ++ E++  GS  + L     PL  +    I     KGL +LH E
Sbjct: 66  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL       +G+                     KL+DFG+A  G 
Sbjct: 124 KK---IHRDIKAANVLLS-----EHGE--------------------VKLADFGVA--GQ 153
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +      S++D++S G+  +E+  G     +  P    
Sbjct: 154 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 213
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            L+    P             P LEG++S    +   +    CL+++P  RP   E+++
Sbjct: 214 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL---NHDGLQGHKE 181
           K+    ++    LG GG   V   ++ E+    +K      VA+K +     +  +  K 
Sbjct: 7   KIINERYKIVDKLGGGGMSTV---YLAEDTILNIK------VAIKAIFIPPREKEETLKR 57
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
           +  EV+    L H N+V +I    EDD   LV E++   +L  ++     PL     +  
Sbjct: 58  FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINF 116
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                 G+   H+     +++RD K  NIL+D+                   N  L    
Sbjct: 117 TNQILDGIKHAHD---MRIVHRDIKPQNILIDS-------------------NKTL---- 150
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             K+ DFG+AK   E   T  +  V+GT  Y +PE          +D+YS G+VL EML 
Sbjct: 151 --KIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207
Query: 362 GR 363
           G 
Sbjct: 208 GE 209

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 8   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 57  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 147
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 148 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 16  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L++ + MP G L +++      +     +   +
Sbjct: 70  DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 129 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 160
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFG AK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 161 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 143 -IKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
           T R
Sbjct: 200 TRR 202

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +L  G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 12  LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 52  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 4   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 53  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 4   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 53  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFG AK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 157 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 4   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 53  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 52  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+K L      + +KE L
Sbjct: 19  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 73  DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFG AK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 11  NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 60  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 150
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 151 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
           L    F+   +LG G FG V+KG WI E     +       VA+  L      + +KE L
Sbjct: 46  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIMELREATSPKANKEIL 99
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +  + + ++ +L+G C+    +L+  + MP G L +++      +     +   +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             AKG+ +L +   R +++RD    N+L+   +                         + 
Sbjct: 159 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 190
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           K++DFGLAK     +K + +        + A E ++    T +SDV+S+GV + E++T
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQ 177
             +ND+K        + ++GEG FG V K  I+       K G  +  A+K +  +    
Sbjct: 19  LDWNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKD 64
Query: 178 GHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
            H+++  E+  L  L H  N++ L+G C       L  E+ P G+L + L R+S  L   
Sbjct: 65  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETD 123
Query: 237 IRMKIALGAAKGLA---FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
               IA   A  L+    LH  A                D  R  +Y      I+  L  
Sbjct: 124 PAFAIANSTASTLSSQQLLHFAA----------------DVARGMDYLSQKQFIHRNLAA 167
Query: 294 NNMLF-QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVY 350
            N+L  ++Y AK++DFGL++    G + +V  + MG     + A E +     T+ SDV+
Sbjct: 168 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 351 SFGVVLLEMLT 361
           S+GV+L E+++
Sbjct: 223 SYGVLLWEIVS 233

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L++ +   +L  +P  +    
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
           T R
Sbjct: 199 TRR 201

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
           T R
Sbjct: 202 TRR 204

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
           T R
Sbjct: 201 TRR 203

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V+K   +E         TG   A K +     +  ++++ E+  L    H  
Sbjct: 27  LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +VKL+G    D +  ++ EF P G+++  +      L       +     + L FLH   
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS-- 135
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            + +I+RD K  N+L+                           + + +L+DFG++    +
Sbjct: 136 -KRIIHRDLKAGNVLMTL-------------------------EGDIRLADFGVSAKNLK 169
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEM 359
             +   S   +GT  + APE VM   +       ++D++S G+ L+EM
Sbjct: 170 TLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
           T R
Sbjct: 199 TRR 201

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQ 177
             +ND+K        + ++GEG FG V K  I+       K G  +  A+K +  +    
Sbjct: 22  LDWNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKD 67
Query: 178 GHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
            H+++  E+  L  L H  N++ L+G C       L  E+ P G+L + L R+S  L   
Sbjct: 68  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETD 126
Query: 237 IRMKIALGAAKGLA---FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
               IA   A  L+    LH  A                D  R  +Y      I+  L  
Sbjct: 127 PAFAIANSTASTLSSQQLLHFAA----------------DVARGMDYLSQKQFIHRDLAA 170
Query: 294 NNMLF-QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVY 350
            N+L  ++Y AK++DFGL++    G + +V  + MG     + A E +     T+ SDV+
Sbjct: 171 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 225
Query: 351 SFGVVLLEMLT 361
           S+GV+L E+++
Sbjct: 226 SYGVLLWEIVS 236

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L++ +   +L  +P  +    
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
           T R
Sbjct: 201 TRR 203

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQ 177
             +ND+K        + ++GEG FG V K  I+       K G  +  A+K +  +    
Sbjct: 12  LDWNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKD 57
Query: 178 GHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
            H+++  E+  L  L H  N++ L+G C       L  E+ P G+L + L R+S  L   
Sbjct: 58  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETD 116
Query: 237 IRMKIALGAAKGLA---FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
               IA   A  L+    LH  A                D  R  +Y      I+  L  
Sbjct: 117 PAFAIANSTASTLSSQQLLHFAA----------------DVARGMDYLSQKQFIHRDLAA 160
Query: 294 NNMLF-QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVY 350
            N+L  ++Y AK++DFGL++    G + +V  + MG     + A E +     T+ SDV+
Sbjct: 161 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 215
Query: 351 SFGVVLLEMLT 361
           S+GV+L E+++
Sbjct: 216 SYGVLLWEIVS 226

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
           T R
Sbjct: 202 TRR 204

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-- 178
             ++ L+   F  E  LGE  FG V+KG +   G AP +      VA+KTL  D  +G  
Sbjct: 3   LKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPL 55
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-------- 230
            +E+  E      L H N+V L+G   +D    +++ +   G L   L  RS        
Sbjct: 56  REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 231 ---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
                    L  P  + +   + A  G+ +L   +   V+++D  T N+L          
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRNVL---------- 160
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 341
                          ++   N K+SD GL ++    D   +    +    + APE +M G
Sbjct: 161 ---------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG 205
Query: 342 HLTSRSDVYSFGVVLLEMLT 361
             +  SD++S+GVVL E+ +
Sbjct: 206 KFSIDSDIWSYGVVLWEVFS 225

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L++ +   +L  +P  +    
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
           T R
Sbjct: 202 TRR 204

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
           T R
Sbjct: 199 TRR 201

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
           T R
Sbjct: 199 TRR 201

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
           T R
Sbjct: 201 TRR 203

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
           T R
Sbjct: 199 TRR 201

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 117/308 (37%), Gaps = 60/308 (19%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLA-EV 186
           +F+  +LLG+G F  V++              TGL VA+K ++   +   G  + +  EV
Sbjct: 12  DFKVGNLLGKGSFAGVYRAE---------SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
                L H ++++L  Y  + +   LV E    G +  +L  R  P   +          
Sbjct: 63  KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            G+ +LH      +++RD   SN+LL                          ++ N K++
Sbjct: 123 TGMLYLHSHG---ILHRDLTLSNLLLT-------------------------RNMNIKIA 154
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           DFGLA       + H +  + GT  Y +PE          SDV+S G +   +L GR   
Sbjct: 155 DFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           D +      N V  A              D  +    SI+      QL    L R+P  R
Sbjct: 213 DTDTVKNTLNKVVLA--------------DYEMPSFLSIEAKDLIHQL----LRRNPADR 254
Query: 427 PLMSEVVE 434
             +S V++
Sbjct: 255 LSLSSVLD 262

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 53
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 54  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 112
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 113 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 145
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 146 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 361 TGR 363
           T R
Sbjct: 203 TRR 205

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L
Sbjct: 3   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ PRG +   L +
Sbjct: 47  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K++DFG +   P   +T     + GT  Y  PE +       + D
Sbjct: 151 -------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 235
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLE 261

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
           T R
Sbjct: 202 TRR 204

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
           T R
Sbjct: 201 TRR 203

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 143 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
           T R
Sbjct: 200 TRR 202

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 4   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 53  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GL+F H      V++RD K  N+L++   A                          K
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 52  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 143 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 52  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 143 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 143 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
           T R
Sbjct: 200 TRR 202

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G FG V+K   +E         TG   A K +     +  ++++ E+  L    H  
Sbjct: 19  LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +VKL+G    D +  ++ EF P G+++  +      L       +     + L FLH   
Sbjct: 70  IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS-- 127
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            + +I+RD K  N+L+                           + + +L+DFG++    +
Sbjct: 128 -KRIIHRDLKAGNVLMTL-------------------------EGDIRLADFGVSAKNLK 161
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEM 359
             +   S   +GT  + APE VM   +       ++D++S G+ L+EM
Sbjct: 162 TLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 5   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +       
Sbjct: 54  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 144
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
           T R
Sbjct: 202 TRR 204

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +    
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 143 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
           T R
Sbjct: 200 TRR 202

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
           LG G FG V +G               + VA+K L     +   +E + E   +  L + 
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            +V+LIG C + +  +LV E    G L   L  +   +P S   ++    + G+ +L E 
Sbjct: 71  YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             +  ++RD    N+LL                            + AK+SDFGL+K   
Sbjct: 129 --KNFVHRDLAARNVLL-------------------------VNRHYAKISDFGLSK-AL 160
Query: 316 EGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             D ++ + R  G +   + APE +     +SRSDV+S+GV + E L+
Sbjct: 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 116/307 (37%), Gaps = 65/307 (21%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E   
Sbjct: 4   KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 54
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 55  TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH    R V+YRD K  N++LD                         +D
Sbjct: 114 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 144
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G     T  +    GT  Y APE +         D +  GVV+ EM+
Sbjct: 145 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
            GR        N +H  L E     L E  RF R + P            +A  L A  L
Sbjct: 203 CGRLPF----YNQDHERLFELI---LMEEIRFPRTLSP------------EAKSLLAGLL 243
Query: 420 SRDPKAR 426
            +DPK R
Sbjct: 244 KKDPKQR 250

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           ++ L   +F    ++G GGFG V+            K  TG   A+K L+   ++  +  
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
             E   L + + L+LV          + Y      +L  + + M  G L  HL +  +  
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
              +R   A     GL  +H    R V+YRD K +NILLD      +G            
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 329
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
                   + ++SD GLA D  +  K H S   +GT+GY APE +  G    S +D +S 
Sbjct: 330 --------HVRISDLGLACDFSK-KKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
           G +L ++L G     +++   +H +
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           ++ L   +F    ++G GGFG V+            K  TG   A+K L+   ++  +  
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 230
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
             E   L + + L+LV          + Y      +L  + + M  G L  HL +  +  
Sbjct: 231 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 289
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
              +R   A     GL  +H    R V+YRD K +NILLD      +G            
Sbjct: 290 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 328
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
                   + ++SD GLA D  +  K H S   +GT+GY APE +  G    S +D +S 
Sbjct: 329 --------HVRISDLGLACDFSK-KKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
           G +L ++L G     +++   +H +
Sbjct: 377 GCMLFKLLRGHSPFRQHKTKDKHEI 401

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
           N++    LGEG FG V   +            TG  VA+K +N   L     QG  E   
Sbjct: 15  NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E+++L  L H +++KL       D+ ++V E+      +  + R  +    + R    + 
Sbjct: 64  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           +A      H+     +++RD K  N+LLD                         +  N K
Sbjct: 124 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 153
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
           ++DFGL+    +G+    S    G+  YAAPE V++G L +    DV+S GV+L  ML  
Sbjct: 154 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
           R   D        KN  NG + L ++  P
Sbjct: 210 RLPFDDESIPVLFKNISNGVYTLPKFLSP 238

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 50/229 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
           +G G FG V+      N            VA+K +++ G Q +++W   + EV FL  L 
Sbjct: 62  IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N ++  G  + +    LV E+   GS  + L     PL       +  GA +GLA+LH
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                 +I+RD K  NILL                 GL            KL DFG A  
Sbjct: 172 SHN---MIHRDVKAGNILLSEP--------------GL-----------VKLGDFGSASI 203
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
               +        +GT  + APE ++    G    + DV+S G+  +E+
Sbjct: 204 MAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           ++ L   +F    ++G GGFG V+            K  TG   A+K L+   ++  +  
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
             E   L + + L+LV          + Y      +L  + + M  G L  HL +  +  
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
              +R   A     GL  +H    R V+YRD K +NILLD      +G            
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 329
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
                   + ++SD GLA D  +  K H S   +GT+GY APE +  G    S +D +S 
Sbjct: 330 --------HVRISDLGLACDFSKK-KPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
           G +L ++L G     +++   +H +
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           ++ L   +F    ++G GGFG V+            K  TG   A+K L+   ++  +  
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
             E   L + + L+LV          + Y      +L  + + M  G L  HL +  +  
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
              +R   A     GL  +H    R V+YRD K +NILLD      +G            
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 329
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
                   + ++SD GLA D  +  K H S   +GT+GY APE +  G    S +D +S 
Sbjct: 330 --------HVRISDLGLACDFSKK-KPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
           G +L ++L G     +++   +H +
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
           N++    LGEG FG V   +            TG  VA+K +N   L     QG  E   
Sbjct: 5   NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E+++L  L H +++KL       D+ ++V E+      +  + R  +    + R    + 
Sbjct: 54  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           +A      H+     +++RD K  N+LLD                         +  N K
Sbjct: 114 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
           ++DFGL+    +G+    S    G+  YAAPE V++G L +    DV+S GV+L  ML  
Sbjct: 144 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
           R   D        KN  NG + L ++  P
Sbjct: 200 RLPFDDESIPVLFKNISNGVYTLPKFLSP 228

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG GGFG VF   ++  G              K   + G    K+ LA+V       H 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
             +  + Y  E    L LV   M  G +  H++      P     +     A+ ++ L  
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             +R +IYRD K  N+LLD                          D N ++SD GLA + 
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
             G     +    GT G+ APE ++        D ++ GV L EM+  R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 113/306 (36%), Gaps = 63/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 52  TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH    R V+YRD K  N++LD                         +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G     T  +    GT  Y APE +         D +  GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            GR             L+      L E  RF R + P            +A  L A  L 
Sbjct: 200 CGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGLLK 241
Query: 421 RDPKAR 426
           +DPK R
Sbjct: 242 KDPKQR 247

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG GGFG VF   ++  G              K   + G    K+ LA+V       H 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
             +  + Y  E    L LV   M  G +  H++      P     +     A+ ++ L  
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             +R +IYRD K  N+LLD                          D N ++SD GLA + 
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
             G     +    GT G+ APE ++        D ++ GV L EM+  R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           K  + D KL T     +  LG G FG V KG+ +      V     + +     N   L+
Sbjct: 361 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 414
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
              E LAE N +  L +  +V++IG C E +  +LV E    G L  +L +       +I
Sbjct: 415 --DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++    + G+ +L E      ++RD    N+LL                        +
Sbjct: 472 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 503
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
            Q Y AK+SDFGL+K     D+ +   +  G +   + APE +     +S+SDV+SFGV+
Sbjct: 504 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 561
Query: 356 LLEMLT 361
           + E  +
Sbjct: 562 MWEAFS 567

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG GGFG VF   ++  G              K   + G    K+ LA+V       H 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
             +  + Y  E    L LV   M  G +  H++      P     +     A+ ++ L  
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             +R +IYRD K  N+LLD                          D N ++SD GLA + 
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
             G     +    GT G+ APE ++        D ++ GV L EM+  R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           NF+    +GEG +G V+K   +  G         L    + +    ++       E++ L
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 56
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKG 248
            +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +         +G
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           LAF H      V++RD K  N+L++   A                          KL+DF
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IKLADF 147
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           GLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 148 GLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           NF+    +GEG +G V+K   +  G         L    + +    ++       E++ L
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 55
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKG 248
            +L H N+VKL+     +++  LV+EF+    L+  +   +L  +P  +         +G
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           LAF H      V++RD K  N+L++   A                          KL+DF
Sbjct: 115 LAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IKLADF 146
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           GLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 147 GLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 128/331 (38%), Gaps = 65/331 (19%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           EEEL  AS+ +       + A  +F     LG+G FG V+    ++         +   +
Sbjct: 14  EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 62
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
           A+K L    L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++ 
Sbjct: 63  ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
             L + S          I    A  L++ H    + VI+RD K  N+LL        G  
Sbjct: 123 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSA 170
Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
           G                   K++DFG +   P   +T     + GT  Y  PE +     
Sbjct: 171 G-----------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 209
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
             + D++S GV+  E L G+   + N                   +  Y+ I  R+E  F
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTF 251
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                + A  L +  L  +P  RP++ EV+E
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 282

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 40/239 (16%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
           +L   +F   S LG G  G V K     +G    +    L +     N        + + 
Sbjct: 12  ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--------QIIR 63
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E+  L +     +V   G    D +  +  E M  GSL + + + +  +P  I  K+++ 
Sbjct: 64  ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIA 122
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLA+L E+ +  +++RD K SNIL+++ R E                         K
Sbjct: 123 VLRGLAYLREKHQ--IMHRDVKPSNILVNS-RGE------------------------IK 155
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           L DFG++    +     ++   +GT  Y APE +   H + +SD++S G+ L+E+  GR
Sbjct: 156 LCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
           N++    LGEG FG V   +            TG  VA+K +N   L     QG  E   
Sbjct: 14  NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E+++L  L H +++KL       D+ ++V E+      +  + R  +    + R    + 
Sbjct: 63  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           +A      H+     +++RD K  N+LLD                         +  N K
Sbjct: 123 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 152
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
           ++DFGL+    +G+    S    G+  YAAPE V++G L +    DV+S GV+L  ML  
Sbjct: 153 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
           R   D        KN  NG + L ++  P
Sbjct: 209 RLPFDDESIPVLFKNISNGVYTLPKFLSP 237

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG GGFG VF   ++  G              K   + G    K+ LA+V       H 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
             +  + Y  E    L LV   M  G +  H++      P     +     A+ ++ L  
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             +R +IYRD K  N+LLD                          D N ++SD GLA + 
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
             G     +    GT G+ APE ++        D ++ GV L EM+  R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 113/308 (36%), Gaps = 63/308 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           D K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E 
Sbjct: 4   DPKVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEV 54
Query: 183 ---LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR 238
              + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R
Sbjct: 55  AHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
              A      L +LH    R V+YRD K  N++LD                         
Sbjct: 114 FYGA-EIVSALEYLHS---RDVVYRDIKLENLMLD------------------------- 144
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +D + K++DFGL K+G     T       GT  Y APE +         D +  GVV+ E
Sbjct: 145 KDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           M+ GR             L+      L E  RF R + P            +A  L A  
Sbjct: 203 MMCGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGL 244
Query: 419 LSRDPKAR 426
           L +DPK R
Sbjct: 245 LKKDPKQR 252

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           K  + D KL T     +  LG G FG V KG+ +      V     + +     N   L+
Sbjct: 362 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 415
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
              E LAE N +  L +  +V++IG C E +  +LV E    G L  +L +       +I
Sbjct: 416 --DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 472
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++    + G+ +L E      ++RD    N+LL                        +
Sbjct: 473 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 504
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
            Q Y AK+SDFGL+K     D+ +   +  G +   + APE +     +S+SDV+SFGV+
Sbjct: 505 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 562
Query: 356 LLEMLT 361
           + E  +
Sbjct: 563 MWEAFS 568

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
           N++    LGEG FG V   +            TG  VA+K +N   L     QG  E   
Sbjct: 9   NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E+++L  L H +++KL       D+ ++V E+      +  + R  +    + R    + 
Sbjct: 58  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           +A      H+     +++RD K  N+LLD                         +  N K
Sbjct: 118 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 147
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
           ++DFGL+    +G+    S    G+  YAAPE V++G L +    DV+S GV+L  ML  
Sbjct: 148 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
           R   D        KN  NG + L ++  P
Sbjct: 204 RLPFDDESIPVLFKNISNGVYTLPKFLSP 232

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 113/306 (36%), Gaps = 63/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
           K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 52  TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH    R V+YRD K  N++LD                         +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G     T  +    GT  Y APE +         D +  GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            GR             L+      L E  RF R + P            +A  L A  L 
Sbjct: 200 CGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGLLK 241
Query: 421 RDPKAR 426
           +DPK R
Sbjct: 242 KDPKQR 247

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
           C + + RL  V E++  G L  H+ +R   LP       +   +  L +LHE   R +IY
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 176
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
           RD K  N+LLD+                         + + KL+D+G+ K+G   GD T 
Sbjct: 177 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 210
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
             +   GT  Y APE +         D ++ GV++ EM+ GR   D   +  N + N  +
Sbjct: 211 --STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           +    + E++        R+    S+    KAA +    L++DPK R
Sbjct: 269 YLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 304

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 130 NFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
             RPE      +LG+GG+G VF+  + +   A       + V  K +     +      A
Sbjct: 13  KIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
           E N L ++ H  +V LI Y  +   +L L+ E++  G L   L R  + +  +    +A 
Sbjct: 71  ERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             +  L  LH++    +IYRD K  NI+L+                            + 
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLN-------------------------HQGHV 160
Query: 304 KLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           KL+DFGL K+   +G  TH      GT  Y APE +M        D +S G ++ +MLTG
Sbjct: 161 KLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQLAAHCLS 420
                             A P  GE R+  + ID  L+   ++     Q+A  L    L 
Sbjct: 218 ------------------APPFTGENRK--KTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 421 RDPKAR 426
           R+  +R
Sbjct: 258 RNAASR 263

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
           C + + RL  V E++  G L  H+ +R   LP       +   +  L +LHE   R +IY
Sbjct: 74  CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 129
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
           RD K  N+LLD+                         + + KL+D+G+ K+G   GD T 
Sbjct: 130 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 163
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
             +   GT  Y APE +         D ++ GV++ EM+ GR   D   +  N + N  +
Sbjct: 164 --SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 221
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           +    + E++        R+    S+    KAA +    L++DPK R
Sbjct: 222 YLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 257

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
           C + + RL  V E++  G L  H+ +R   LP       +   +  L +LHE   R +IY
Sbjct: 78  CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 133
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
           RD K  N+LLD+                         + + KL+D+G+ K+G   GD T 
Sbjct: 134 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 167
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
             +   GT  Y APE +         D ++ GV++ EM+ GR   D   +  N + N  +
Sbjct: 168 --SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 225
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           +    + E++        R+    S+    KAA +    L++DPK R
Sbjct: 226 YLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 261

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 50/229 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
           +G G FG V+      N            VA+K +++ G Q +++W   + EV FL  L 
Sbjct: 23  IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N ++  G  + +    LV E+   GS  + L     PL       +  GA +GLA+LH
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                 +I+RD K  NILL                 GL            KL DFG A  
Sbjct: 133 SHN---MIHRDVKAGNILLSEP--------------GL-----------VKLGDFGSASI 164
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
               +        +GT  + APE ++    G    + DV+S G+  +E+
Sbjct: 165 MAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 115/307 (37%), Gaps = 65/307 (21%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 52  TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH    R V+YRD K  N++LD                         +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G     T       GT  Y APE +         D +  GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
            GR        N +H  L E     L E  RF R + P            +A  L A  L
Sbjct: 200 CGRLPF----YNQDHERLFELI---LMEEIRFPRTLSP------------EAKSLLAGLL 240
Query: 420 SRDPKAR 426
            +DPK R
Sbjct: 241 KKDPKQR 247

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 115/307 (37%), Gaps = 65/307 (21%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 52  TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH    R V+YRD K  N++LD                         +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G     T       GT  Y APE +         D +  GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
            GR        N +H  L E     L E  RF R + P            +A  L A  L
Sbjct: 200 CGRLPF----YNQDHERLFELI---LMEEIRFPRTLSP------------EAKSLLAGLL 240
Query: 420 SRDPKAR 426
            +DPK R
Sbjct: 241 KKDPKQR 247

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
           LG G FG V +G               + VA+K L     +   +E + E   +  L + 
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            +V+LIG C + +  +LV E    G L   L  +   +P S   ++    + G+ +L E 
Sbjct: 397 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 454
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             +  ++R+    N+LL                            + AK+SDFGL+K   
Sbjct: 455 --KNFVHRNLAARNVLL-------------------------VNRHYAKISDFGLSK-AL 486
Query: 316 EGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             D ++ + R  G +   + APE +     +SRSDV+S+GV + E L+
Sbjct: 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 116/308 (37%), Gaps = 62/308 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE- 181
           D ++    F    LLG+G FG V    ++E  T       G   A+K L  + +    E 
Sbjct: 4   DPRVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEV 54
Query: 182 --WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR 238
              L E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R
Sbjct: 55  AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 113
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
              A      L +LH  +E+ V+YRD K  N++LD                         
Sbjct: 114 FYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLD------------------------- 145
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +D + K++DFGL K+G +   T       GT  Y APE +         D +  GVV+ E
Sbjct: 146 KDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           M+ GR             L+      L E  RF R + P            +A  L +  
Sbjct: 204 MMCGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGL 245
Query: 419 LSRDPKAR 426
           L +DPK R
Sbjct: 246 LKKDPKQR 253

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
           C + + RL  V E++  G L  H+ +R   LP       +   +  L +LHE   R +IY
Sbjct: 89  CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 144
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
           RD K  N+LLD+                         + + KL+D+G+ K+G   GD T 
Sbjct: 145 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 178
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
             +   GT  Y APE +         D ++ GV++ EM+ GR   D   +  N + N  +
Sbjct: 179 --SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 236
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
           +    + E++        R+    S+    KAA +    L++DPK R
Sbjct: 237 YLFQVILEKQ-------IRIPRSMSV----KAASVLKSFLNKDPKER 272

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 130 NFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
             RPE      +LG+GG+G VF+  + +   A       + V  K +     +      A
Sbjct: 13  KIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
           E N L ++ H  +V LI Y  +   +L L+ E++  G L   L R  + +  +    +A 
Sbjct: 71  ERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             +  L  LH++    +IYRD K  NI+L+                            + 
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLN-------------------------HQGHV 160
Query: 304 KLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           KL+DFGL K+   +G  TH      GT  Y APE +M        D +S G ++ +MLTG
Sbjct: 161 KLTDFGLCKESIHDGTVTHX---FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQLAAHCLS 420
                             A P  GE R+  + ID  L+   ++     Q+A  L    L 
Sbjct: 218 ------------------APPFTGENRK--KTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 421 RDPKAR 426
           R+  +R
Sbjct: 258 RNAASR 263

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V    +  +G           VAVK ++    Q  +    EV  + D  H N
Sbjct: 159 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L + +           RM       + L   + L+
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALS 261
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 262 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 293
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 294 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  R +    + P L+G                 L RDP  R
Sbjct: 348 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 392
Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 393 ATAAELLK 400

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 127/331 (38%), Gaps = 65/331 (19%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           EEEL  AS+ +       + A  +F     LG+G FG V+            +  +   +
Sbjct: 5   EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFIL 53
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
           A+K L    L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++ 
Sbjct: 54  ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 113
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
             L + S          I    A  L++ H    + VI+RD K  N+LL        G  
Sbjct: 114 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSA 161
Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
           G                   K++DFG +   P   +T     + GT  Y  PE +     
Sbjct: 162 G-----------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 200
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
             + D++S GV+  E L G+   + N                   +  Y+ I  R+E  F
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTF 242
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                + A  L +  L  +P  RP++ EV+E
Sbjct: 243 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 273

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 66/310 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGDL 192
           +GEG +G V+K           K   G  VA+K +  D    G+      + E++ L +L
Sbjct: 29  VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAF 251
            H N+V LI     +    LV+EFM +  L+  L      L  S ++KI L    +G+A 
Sbjct: 77  HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H+     +++RD K  N+L+++                         D   KL+DFGLA
Sbjct: 135 CHQHR---ILHRDLKPQNLLINS-------------------------DGALKLADFGLA 166
Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR-----RS 365
           +    G      T  + T  Y AP+ +M     S S D++S G +  EM+TG+      +
Sbjct: 167 R--AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 366 MDKNRPN-----GEHNLVEWARPHLGE----RRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
            D   P      G  N  EW  P + E    ++R +++ + +          Q+   L +
Sbjct: 225 DDDQLPKIFSILGTPNPREW--PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS 282
Query: 417 HCLSRDPKAR 426
           + L  DP  R
Sbjct: 283 NMLCFDPNKR 292

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 64/249 (25%)
Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHLNL 197
           G FGCV+K  +  +            VAVK      LQ  + W +E        + H NL
Sbjct: 26  GRFGCVWKAQLMND-----------FVAVKIFP---LQDKQSWQSEREIFSTPGMKHENL 71
Query: 198 VKLI-----GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
           ++ I     G  +E  +  L+  F  +GSL ++L  +   + W+    +A   ++GL++L
Sbjct: 72  LQFIAAEKRGSNLEV-ELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYL 128
Query: 253 HE-------EAERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           HE       E  +P I +RDFK+ N+LL +                         D  A 
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKS-------------------------DLTAV 163
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT------SRSDVYSFGVVLLE 358
           L+DFGLA     G     +   +GT  Y APE V+ G +        R D+Y+ G+VL E
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWE 222
Query: 359 MLTGRRSMD 367
           +++  ++ D
Sbjct: 223 LVSRCKAAD 231

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 123/324 (37%), Gaps = 69/324 (21%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           E E+ +A    + T N+       F    LLG+G FG V    ++E  T       G   
Sbjct: 133 EMEVSLAKPKHRVTMNE-------FEYLKLLGKGTFGKVI--LVKEKAT-------GRYY 176
Query: 167 AVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL 222
           A+K L  + +    E    L E   L +  H  L  L  Y  +   RL  V E+   G L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 235
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
             HL R  +      R   A      L +LH  +E+ V+YRD K  N++LD         
Sbjct: 236 FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLD--------- 283
Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
                           +D + K++DFGL K+G +   T  +    GT  Y APE +    
Sbjct: 284 ----------------KDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDND 325
Query: 343 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH 402
                D +  GVV+ EM+ GR             L+      L E  RF R + P     
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP----- 374
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
                  +A  L +  L +DPK R
Sbjct: 375 -------EAKSLLSGLLKKDPKQR 391

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 116/306 (37%), Gaps = 62/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
           ++    F    LLG+G FG V    ++E  T       G   A+K L  + +    E   
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 197
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            L E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 198 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH  +E+ V+YRD K  N++LD                         +D
Sbjct: 257 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLD-------------------------KD 288
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G +   T  +    GT  Y APE +         D +  GVV+ EM+
Sbjct: 289 GHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            GR             L+      L E  RF R + P            +A  L +  L 
Sbjct: 347 CGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGLLK 388
Query: 421 RDPKAR 426
           +DPK R
Sbjct: 389 KDPKQR 394

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 123/326 (37%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L
Sbjct: 3   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ PRG +   L +
Sbjct: 47  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K++DFG +   P   +  +     GT  Y  PE +       + D
Sbjct: 151 -------------ELKIADFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRMHDEKVD 193
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 235
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLE 261

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 130/319 (40%), Gaps = 84/319 (26%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGDL 192
           + ++G+G FG V+ G   +     ++       A+K+L+    +Q  + +L E   +  L
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQ------CAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 193 VHLNLVKLIGYCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAK 247
            H N++ LIG  +  +     LL Y  M  G L    F RS     +++  I+ G   A+
Sbjct: 80  NHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ--FIRSPQRNPTVKDLISFGLQVAR 135
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+ +L   AE+  ++RD    N +LD                         + +  K++D
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLD-------------------------ESFTVKVAD 167
Query: 308 FGLAKDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           FGLA+D  + +    + H   R+     + A E + T   T++SDV+SFGV+L E+LT  
Sbjct: 168 FGLARDILDREYYSVQQHRHARL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-- 223
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ---------KAAQL 414
               +  P                    YR IDP    HF  +G +            Q+
Sbjct: 224 ----RGAPP-------------------YRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQV 260
Query: 415 AAHCLSRDPKARPLMSEVV 433
              C   DP  RP    +V
Sbjct: 261 MQQCWEADPAVRPTFRVLV 279

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 112/306 (36%), Gaps = 63/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V    + E  T       G   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 52  TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH    R V+YRD K  N++LD                         +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G     T       GT  Y APE +         D +  GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            GR             L+      L E  RF R + P            +A  L A  L 
Sbjct: 200 CGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGLLK 241
Query: 421 RDPKAR 426
           +DPK R
Sbjct: 242 KDPKQR 247

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 66/310 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGDL 192
           +GEG +G V+K           K   G  VA+K +  D    G+      + E++ L +L
Sbjct: 29  VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAF 251
            H N+V LI     +    LV+EFM +  L+  L      L  S ++KI L    +G+A 
Sbjct: 77  HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H+     +++RD K  N+L+++                         D   KL+DFGLA
Sbjct: 135 CHQHR---ILHRDLKPQNLLINS-------------------------DGALKLADFGLA 166
Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR-----RS 365
           +    G      T  + T  Y AP+ +M     S S D++S G +  EM+TG+      +
Sbjct: 167 R--AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 366 MDKNRPN-----GEHNLVEWARPHLGE----RRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
            D   P      G  N  EW  P + E    ++R +++ + +          Q+   L +
Sbjct: 225 DDDQLPKIFSILGTPNPREW--PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS 282
Query: 417 HCLSRDPKAR 426
           + L  DP  R
Sbjct: 283 NMLCFDPNKR 292

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           K  + D KL T     +  LG G FG V KG+ +      V     + +     N   L+
Sbjct: 19  KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 72
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
              E LAE N +  L +  +V++IG C E +  +LV E    G L  +L +       +I
Sbjct: 73  D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++    + G+ +L E      ++RD    N+LL                        +
Sbjct: 130 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 161
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
            Q Y AK+SDFGL+K     D+ +   +  G +   + APE +     +S+SDV+SFGV+
Sbjct: 162 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 219
Query: 356 LLEMLT 361
           + E  +
Sbjct: 220 MWEAFS 225

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           K  + D KL T     +  LG G FG V KG+ +      V     + +     N   L+
Sbjct: 19  KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 72
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
              E LAE N +  L +  +V++IG C E +  +LV E    G L  +L +       +I
Sbjct: 73  D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++    + G+ +L E      ++RD    N+LL                        +
Sbjct: 130 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 161
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
            Q Y AK+SDFGL+K     D+ +   +  G +   + APE +     +S+SDV+SFGV+
Sbjct: 162 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 219
Query: 356 LLEMLT 361
           + E  +
Sbjct: 220 MWEAFS 225

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           K  + D KL T     +  LG G FG V KG+ +      V     + +     N   L+
Sbjct: 17  KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 70
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
              E LAE N +  L +  +V++IG C E +  +LV E    G L  +L +       +I
Sbjct: 71  D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 127
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++    + G+ +L E      ++RD    N+LL                        +
Sbjct: 128 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 159
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
            Q Y AK+SDFGL+K     D+ +   +  G +   + APE +     +S+SDV+SFGV+
Sbjct: 160 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 217
Query: 356 LLEMLT 361
           + E  +
Sbjct: 218 MWEAFS 223

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    ++         +   +A+K L    L
Sbjct: 4   RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 47
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 48  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 107
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 108 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 146
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +S    GT  Y  PE +       + D++S G
Sbjct: 147 --------ELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 236
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 237 LISRLLKHNPSQRPMLREVLE 257

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 83/324 (25%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +F+   L+G GGFG VFK     +G          T  +K + ++  +  +E    V  L
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIKRVKYNNEKAERE----VKAL 58
Query: 190 GDLVHLNLVKLIG------YCIEDDQR----------LLVYEFMPRGSLENHL-FRRSLP 232
             L H+N+V   G      Y  E   +           +  EF  +G+LE  +  RR   
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           L   + +++     KG+ ++H    + +I RD K SNI L   +    G FG        
Sbjct: 119 LDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVT----- 170
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
                            L  DG          R  GT  Y +PE + +       D+Y+ 
Sbjct: 171 ----------------SLKNDGKR-------XRSKGTLRYMSPEQISSQDYGKEVDLYAL 207
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           G++L E+L               ++ + A     E  +F+   D R +G  S    +K  
Sbjct: 208 GLILAELL---------------HVCDTA----FETSKFF--TDLR-DGIISDIFDKKEK 245
Query: 413 QLAAHCLSRDPKARPLMSEVVEAL 436
            L    LS+ P+ RP  SE++  L
Sbjct: 246 TLLQKLLSKKPEDRPNTSEILRTL 269

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 125/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+    ++         +   +A+K L
Sbjct: 3   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L +
Sbjct: 47  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K++DFG +   P   +T     + GT  Y  PE +       + D
Sbjct: 151 -------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 235
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLE 261

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 115/306 (37%), Gaps = 62/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
           ++    F    LLG+G FG V    ++E  T       G   A+K L  + +    E   
Sbjct: 4   RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 54
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            L E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 55  TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH  +E+ V+YRD K  N++LD                         +D
Sbjct: 114 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLD-------------------------KD 145
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G +   T       GT  Y APE +         D +  GVV+ EM+
Sbjct: 146 GHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            GR             L+      L E  RF R + P            +A  L +  L 
Sbjct: 204 CGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGLLK 245
Query: 421 RDPKAR 426
           +DPK R
Sbjct: 246 KDPKQR 251

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
           NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      + E
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
           ++ L +L H N+VKL+     +++  LV+E +    L+  +   +L  +P  +       
Sbjct: 52  ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLAF H      V++RD K  N+L++   A                          K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           L+DFGLA+    G      T  + T  Y APE ++   + ++  D++S G +  EM+T R
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 123/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L  
Sbjct: 1   SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 44
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
             L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S
Sbjct: 45  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
                     I    A  L++ H    + VI+RD K  N+LL        G  G      
Sbjct: 105 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 146
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K++DFG +   P   +T +     GT  Y  PE +       + D++
Sbjct: 147 -----------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLW 191
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S GV+  E L G+   + N     +  +                   R+E  F     + 
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 233
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
           A  L +  L  +P  RP++ EV+E
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVLE 257

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L
Sbjct: 1   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L +
Sbjct: 45  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K++DFG +   P   +T     + GT  Y  PE +       + D
Sbjct: 149 -------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V    +  +G           VAVK ++    Q  +    EV  + D  H N
Sbjct: 82  IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L +        +    RM       + L   + L+
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 184
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 185 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 216
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 217 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  R +    + P L+G                 L RDP  R
Sbjct: 271 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 315
Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 316 ATAAELLK 323

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG VFKG   +N T  V       VA+K ++  +     ++   E+  L      
Sbjct: 31  IGKGSFGEVFKGI--DNRTQQV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + K  G  ++  +  ++ E++  GS  + L  R+ P        +     KGL +LH E
Sbjct: 82  YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYLHSE 139
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL                          +  + KL+DFG+A  G 
Sbjct: 140 KK---IHRDIKAANVLLS-------------------------EQGDVKLADFGVA--GQ 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +      S++D++S G+  +E+  G        P    
Sbjct: 170 LTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL 229
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            L+    P             P L G F+    +   +    CL++DP  RP   E+++
Sbjct: 230 FLIPKNNP-------------PTLVGDFT----KSFKEFIDACLNKDPSFRPTAKELLK 271

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 115/306 (37%), Gaps = 62/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
           ++    F    LLG+G FG V    ++E  T       G   A+K L  + +    E   
Sbjct: 5   RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 55
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            L E   L +  H  L  L  Y  +   RL  V E+   G L  HL R  +      R  
Sbjct: 56  TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L +LH  +E+ V+YRD K  N++LD                         +D
Sbjct: 115 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLD-------------------------KD 146
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K++DFGL K+G +   T       GT  Y APE +         D +  GVV+ EM+
Sbjct: 147 GHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            GR             L+      L E  RF R + P            +A  L +  L 
Sbjct: 205 CGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGLLK 246
Query: 421 RDPKAR 426
           +DPK R
Sbjct: 247 KDPKQR 252

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG V+KG   +N T  V       VA+K ++  +     ++   E+  L      
Sbjct: 27  IGKGSFGEVYKGI--DNHTKEV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
            + +  G  ++  +  ++ E++  GS  + L  +  PL  +    I     KGL +LH E
Sbjct: 78  YITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE 135
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +   I+RD K +N+LL                          +  + KL+DFG+A  G 
Sbjct: 136 RK---IHRDIKAANVLLS-------------------------EQGDVKLADFGVA--GQ 165
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
             D        +GT  + APE +       ++D++S G+  +E+  G        P    
Sbjct: 166 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL 225
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            L+    P             P LEG  S    +   +    CL++DP+ RP   E+++
Sbjct: 226 FLIPKNSP-------------PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 124/324 (38%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           S+ R++   D ++     RP   LG+G FG V+    ++         +   +A+K L  
Sbjct: 5   SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 48
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
             L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
                     I    A  L++ H    + VI+RD K  N+LL        G  G      
Sbjct: 109 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 150
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K++DFG +   P   +T +     GT  Y  PE +       + D++
Sbjct: 151 -----------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLW 195
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S GV+  E L G+   + N     +  +                   R+E  F     + 
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 237
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
           A  L +  L  +P  RP++ EV+E
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVLE 261

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 96/242 (39%), Gaps = 44/242 (18%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           +L   NF    +LG+G FG V    ++E         TG   AVK L  D +    +   
Sbjct: 19  RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMK 240
            + E   L    +   +  +  C +   RL  V EF+  G L  H+ ++S     +    
Sbjct: 70  TMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARF 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
            A      L FLH++    +IYRD K  N+LLD                          +
Sbjct: 129 YAAEIISALMFLHDKG---IIYRDLKLDNVLLD-------------------------HE 160
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + KL+DFG+ K+G     T  +    GT  Y APE +         D ++ GV+L EML
Sbjct: 161 GHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 361 TG 362
            G
Sbjct: 219 CG 220

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
           K  + D KL T   +    LG G FG V KG+ +      V     + +     N   L+
Sbjct: 9   KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 62
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
              E LAE N +  L +  +V++IG C E +  +LV E    G L  +L +       +I
Sbjct: 63  D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 119
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +++    + G+ +L E      ++RD    N+LL                        +
Sbjct: 120 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 151
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
            Q Y AK+SDFGL+K     D+ +   +  G +   + APE +     +S+SDV+SFGV+
Sbjct: 152 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 209
Query: 356 LLEMLT 361
           + E  +
Sbjct: 210 MWEAFS 215

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
           ++ DA +A N+      I+  +   N+L    NA K+ DFG+A+     G+    +  V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           GT  Y +PE      + +RSDVYS G VL E+LTG      + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V KG+ +      V     + +     N   L+   E LAE N +  L +  
Sbjct: 19  LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V++IG C E +  +LV E    G L  +L +       +I +++    + G+ +L E  
Sbjct: 74  IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 131
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               ++RD    N+LL                        + Q Y AK+SDFGL+K    
Sbjct: 132 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 162
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            D+ +   +  G +   + APE +     +S+SDV+SFGV++ E  +
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V KG+ +      V     + +     N   L+   E LAE N +  L +  
Sbjct: 13  LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 67
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V++IG C E +  +LV E    G L  +L +       +I +++    + G+ +L E  
Sbjct: 68  IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 125
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               ++RD    N+LL                        + Q Y AK+SDFGL+K    
Sbjct: 126 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 156
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            D+ +   +  G +   + APE +     +S+SDV+SFGV++ E  +
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L
Sbjct: 1   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L +
Sbjct: 45  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K++DFG +   P   +T +     GT  Y  PE +       + D
Sbjct: 149 -------------ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 124/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    ++         +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTELC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N                   +  Y+ I  R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V    +  +G           VAVK ++    Q  +    EV  + D  H N
Sbjct: 39  IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L +        +    RM       + L   + L+
Sbjct: 90  VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 141
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 142 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 173
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 174 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  R +    + P L+G                 L RDP  R
Sbjct: 228 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 272
Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 273 ATAAELLK 280

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V    +  +G           VAVK ++    Q  +    EV  + D  H N
Sbjct: 37  IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L +        +    RM       + L   + L+
Sbjct: 88  VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 139
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 140 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 171
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 172 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  R +    + P L+G                 L RDP  R
Sbjct: 226 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 270
Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 271 ATAAELLK 278

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V KG+ +      V     + +     N   L+   E LAE N +  L +  
Sbjct: 15  LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V++IG C E +  +LV E    G L  +L +       +I +++    + G+ +L E  
Sbjct: 70  IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 127
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               ++RD    N+LL                        + Q Y AK+SDFGL+K    
Sbjct: 128 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 158
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            D+ +   +  G +   + APE +     +S+SDV+SFGV++ E  +
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V    +  +G           VAVK ++    Q  +    EV  + D  H N
Sbjct: 28  IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L +        +    RM       + L   + L+
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 130
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 131 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 162
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 163 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  R +    + P L+G                 L RDP  R
Sbjct: 217 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 261
Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 262 ATAAELLK 269

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 108/257 (42%), Gaps = 63/257 (24%)
Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE--VNFLGDLVHLNL 197
           G FGCV+K  +               VAVK      +Q  + W  E  V  L  + H N+
Sbjct: 35  GRFGCVWKAQLLNE-----------YVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENI 80
Query: 198 VKLIGY----CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           ++ IG        D    L+  F  +GSL +  F ++  + W+    IA   A+GLA+LH
Sbjct: 81  LQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLH 138
Query: 254 EE------AERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           E+        +P I +RD K+ N+LL                     NN+      A ++
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLK--------------------NNL-----TACIA 173
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT------SRSDVYSFGVVLLEML 360
           DFGLA     G     +   +GT  Y APE V+ G +        R D+Y+ G+VL E+ 
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELA 232
Query: 361 TGRRSMDKNRPNGEHNL 377
           +  R    + P  E+ L
Sbjct: 233 S--RCTAADGPVDEYML 247

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
           +  NF+    +GEG +G V+K     N        TG  VA+K +  D    G+      
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
           + E++ L +L H N+VKL+     +++  LV+E + +  L+  +   +L  +P  +    
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GLAF H      V++RD K  N+L++   A                        
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             KL+DFGLA+      +T+    V  T  Y APE ++   + ++  D++S G +  EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
           T R
Sbjct: 202 TRR 204

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
           ++ DA +A N+      I+  +   N++    NA K+ DFG+A+     G+    +  V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
           GT  Y +PE      + +RSDVYS G VL E+LTG      + P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 132/334 (39%), Gaps = 66/334 (19%)
Query: 108 EELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
           + L ++  L++    D+ +  + F    +LG+G FG V +  +++      + G+ + VA
Sbjct: 3   DSLGISDELKE-KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQ------EDGSFVKVA 55
Query: 168 VKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR------LLVYEFMPR 219
           VK L  D +     +E+L E   + +  H ++ KL+G  +    +      +++  FM  
Sbjct: 56  VKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 220 GSLENHLFRRSL-----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
           G L   L    +      LP    ++  +  A G+ +L   + R  I+RD    N     
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNC---- 168
Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 334
                                ML +D    ++DFGL++    GD             + A
Sbjct: 169 ---------------------MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 335 PEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE-HNLVEWARPHLGERRRFYR 393
            E +     T  SDV++FGV + E++T  ++      N E +N +      +G      R
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL------IGGN----R 257
Query: 394 LIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           L  P        +  ++   L   C S DPK RP
Sbjct: 258 LKQPP-------ECMEEVYDLMYQCWSADPKQRP 284

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 127/331 (38%), Gaps = 65/331 (19%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           EEEL  AS+ +       + A  +F     LG+G FG V+    ++         +   +
Sbjct: 14  EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 62
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
           A+K L    L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++ 
Sbjct: 63  ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
             L + S          I    A  L++ H    + VI+RD K  N+LL        G  
Sbjct: 123 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSA 170
Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
           G                   K++DFG +   P   +  +     GT  Y  PE +     
Sbjct: 171 G-----------------ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMH 209
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
             + D++S GV+  E L G+   + N                   +  Y+ I  R+E  F
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTF 251
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                + A  L +  L  +P  RP++ EV+E
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 282

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 32  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 81  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES-- 138
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++   +
Sbjct: 139 -KQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 172
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
            ++T  S        ++ PE +M    +S+SD+++FGV++ E+ +  +   +   N E  
Sbjct: 173 DEETS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 229
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
                  H+ +  R YR   P L        ++K   +   C       RP    L+S +
Sbjct: 230 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 275
Query: 433 VEAL 436
           ++ +
Sbjct: 276 LDVM 279

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V    +  +G           VAVK ++    Q  +    EV  + D  H N
Sbjct: 32  IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V++    +  D+  +V EF+  G+L +        +    RM       + L   + L+
Sbjct: 83  VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 134
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
            LH +    VI+RD K+ +ILL                           D   KLSDFG 
Sbjct: 135 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 166
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
              ++K+ P          ++GT  + APE +         D++S G++++EM+ G    
Sbjct: 167 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     ++   R +L  R +    + P L+G                 L RDP  R
Sbjct: 221 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 265
Query: 427 PLMSEVVE 434
              +E+++
Sbjct: 266 ATAAELLK 273

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 124/324 (38%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L  
Sbjct: 5   SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 48
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
             L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
                     I    A  L++ H    + VI+RD K  N+LL        G  G      
Sbjct: 109 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 150
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K++DFG +   P   +T     + GT  Y  PE +       + D++
Sbjct: 151 -----------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEXIEGRXHDEKVDLW 195
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S GV+  E L G+   + N                   +  Y+ I  R+E  F     + 
Sbjct: 196 SLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTFPDFVTEG 237
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
           A  L +  L  +P  RP + EV+E
Sbjct: 238 ARDLISRLLKHNPSQRPXLREVLE 261

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           D+K   + +     LGEG F  V+K    +  T  +     + +  ++   DG+  ++  
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGI--NRTA 59
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L E+  L +L H N++ L+          LV++FM    LE  +   SL L  S      
Sbjct: 60  LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           L   +GL +LH+     +++RD K +N+LLD                    N +L     
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDE-------------------NGVL----- 151
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEML 360
            KL+DFGLAK     ++ +    V  T  Y APE +    +     D+++ G +L E+L
Sbjct: 152 -KLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 53/232 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +GEG  G V             +  TG  VAVK ++    Q  +    EV  + D  H N
Sbjct: 53  IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
           +V +    +  D+  +V EF+  G+L +        +    RM       + L   + L+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIATVCLSVLRALS 155
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH +    VI+RD K+ +ILL +        FGFC                A++S    
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFC----------------AQVS---- 192
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ P+         ++GT  + APE +      +  D++S G++++EM+ G
Sbjct: 193 -KEVPK------RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+            +  +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+            +  +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   + VA+KT  +      +E +L E   +    H 
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 508
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ A           C+                KL DFGL++   
Sbjct: 509 SKR-FVHRDIAARNVLVSATD---------CV----------------KLGDFGLSR-YM 541
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 596
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 597 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 644
Query: 435 ALKPL 439
            L  +
Sbjct: 645 QLSTI 649

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 122/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    ++         +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T     + GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+            +  +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+            +  +   +A+K L    L
Sbjct: 2   RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 45
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 46  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 105
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 106 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 144
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 145 --------ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 192
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 193 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 234
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 235 LISRLLKHNPSQRPMLREVLE 255

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
           ++ DA +A N+      I+  +   N++    NA K+ DFG+A+     G+    +  V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           GT  Y +PE      + +RSDVYS G VL E+LTG      + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V KG+ +      V     + +     N   L+   E LAE N +  L +  
Sbjct: 19  LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V++IG C E +  +LV E    G L  +L +       +I +++    + G+ +L E  
Sbjct: 74  IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 131
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               ++RD    N+LL                        + Q Y AK+SDFGL+K    
Sbjct: 132 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 162
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            D+     +  G +   + APE +     +S+SDV+SFGV++ E  +
Sbjct: 163 ADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
           ++ DA +A N+      I+  +   N++    NA K+ DFG+A+     G+    +  V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           GT  Y +PE      + +RSDVYS G VL E+LTG      + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
           ++ DA +A N+      I+  +   N++    NA K+ DFG+A+     G+    +  V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           GT  Y +PE      + +RSDVYS G VL E+LTG      + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 121/315 (38%), Gaps = 58/315 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLV 193
           L+GEG +G V K   ++         TG  VA+K    + D     K  + E+  L  L 
Sbjct: 32  LVGEGSYGMVMKCRNKD---------TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-HLFRRSLPLPWSIRMKIALGAAKGLAFL 252
           H NLV L+  C +  +  LV+EF+    L++  LF     L + +  K       G+ F 
Sbjct: 83  HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFC 140
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      +I+RD K  NIL+                          Q    KL DFG A+
Sbjct: 141 HSHN---IIHRDIKPENILVS-------------------------QSGVVKLCDFGFAR 172
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSM--DKN 369
                    V    + T  Y APE ++      ++ DV++ G ++ EM  G      D +
Sbjct: 173 --TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 370 RPNGEH------NLVEWARPHLGERRRFYRLIDPRLEGHFSI-----KGAQKAAQLAAHC 418
                H      NL+   +    +   F  +  P ++    +     K ++    LA  C
Sbjct: 231 IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKC 290
Query: 419 LSRDPKARPLMSEVV 433
           L  DP  RP  +E++
Sbjct: 291 LHIDPDKRPFCAELL 305

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 126/338 (37%), Gaps = 98/338 (28%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +F+   L+G GGFG VFK     +G          T  ++ + ++  +  +E    V  L
Sbjct: 13  DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIRRVKYNNEKAERE----VKAL 59
Query: 190 GDLVHLNLVKLIGYCIE---------DDQR---------------------LLVYEFMPR 219
             L H+N+V   G C +         DD                        +  EF  +
Sbjct: 60  AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 220 GSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
           G+LE  +  RR   L   + +++     KG+ ++H    + +I+RD K SNI L   +  
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQV 175
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
             G FG                         L  DG         TR  GT  Y +PE +
Sbjct: 176 KIGDFGLVT---------------------SLKNDGKR-------TRSKGTLRYMSPEQI 207
Query: 339 MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPR 398
            +       D+Y+ G++L E+L               ++ + A     E  +F+   D R
Sbjct: 208 SSQDYGKEVDLYALGLILAELL---------------HVCDTA----FETSKFF--TDLR 246
Query: 399 LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
            +G  S    +K   L    LS+ P+ RP  SE++  L
Sbjct: 247 -DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    E+N        +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLA-REKN--------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KKVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +  +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQDTYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 17  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 66  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++   +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 157
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
            + T  S        ++ PE +M    +S+SD+++FGV++ E+ +  +   +   N E  
Sbjct: 158 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 214
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
                  H+ +  R YR   P L        ++K   +   C       RP    L+S +
Sbjct: 215 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 260
Query: 433 VEAL 436
           ++ +
Sbjct: 261 LDVM 264

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 122/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    ++         +   +A+K L    L
Sbjct: 7   RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 50
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 51  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 110
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 111 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 149
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 150 --------ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 198 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 239
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 240 LISRLLKHNPSQRPMLREVLE 260

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 16  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 65  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 121
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++   +
Sbjct: 122 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
            + T  S        ++ PE +M    +S+SD+++FGV++ E+ +  +   +   N E  
Sbjct: 157 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 213
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
                  H+ +  R YR   P L        ++K   +   C       RP    L+S +
Sbjct: 214 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 259
Query: 433 VEAL 436
           ++ +
Sbjct: 260 LDVM 263

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 122/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L  
Sbjct: 2   SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 45
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
             L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S
Sbjct: 46  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
                     I    A  L++ H    + VI+RD K  N+LL        G  G      
Sbjct: 106 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 147
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K++DFG +   P   +  +     GT  Y  PE +       + D++
Sbjct: 148 -----------ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLW 192
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S GV+  E L G+   + N     +  +                   R+E  F     + 
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 234
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
           A  L +  L  +P  RP++ EV+E
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVLE 258

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 66/307 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 17  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 66  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++    
Sbjct: 123 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVL- 156
Query: 317 GDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
            D  + S+R  G+     ++ PE +M    +S+SD+++FGV++ E+ +  +   +   N 
Sbjct: 157 -DDEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LM 429
           E         H+ +  R YR   P L        ++K   +   C       RP    L+
Sbjct: 214 E------TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILL 257
Query: 430 SEVVEAL 436
           S +++ +
Sbjct: 258 SNILDVM 264

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 12  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 61  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 117
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++   +
Sbjct: 118 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 152
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK--NRPNG 373
            + T  S        ++ PE +M    +S+SD+++FGV++ E+ + G+   ++  N    
Sbjct: 153 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
Query: 374 EHNL--VEWARPHLGERRRF 391
           EH    +   RPHL   + +
Sbjct: 212 EHIAQGLRLYRPHLASEKVY 231

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 123/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L  
Sbjct: 2   SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 45
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
             L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S
Sbjct: 46  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
                     I    A  L++ H    + VI+RD K  N+LL        G  G      
Sbjct: 106 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 147
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K+++FG +   P   +T     + GT  Y  PE +       + D++
Sbjct: 148 -----------ELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S GV+  E L G+   + N     +  +                   R+E  F     + 
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 234
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
           A  L +  L  +P  RP++ EV+E
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVLE 258

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 32  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 81  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++   +
Sbjct: 138 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 172
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK--NRPNG 373
            + T  S        ++ PE +M    +S+SD+++FGV++ E+ + G+   ++  N    
Sbjct: 173 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 374 EH--NLVEWARPHLGERRRF 391
           EH    +   RPHL   + +
Sbjct: 232 EHIAQGLRLYRPHLASEKVY 251

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V  G          K      VA+K +  +G     E++ E   + +L H  
Sbjct: 23  LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV+L G C +     ++ E+M  G L N+L            +++     + + +L    
Sbjct: 72  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 128
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
            +  ++RD    N L++                              K+SDFGL++   +
Sbjct: 129 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 163
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
            + T  S        ++ PE +M    +S+SD+++FGV++ E+ +  +   +   N E  
Sbjct: 164 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 220
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
                  H+ +  R YR   P L        ++K   +   C       RP    L+S +
Sbjct: 221 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 266
Query: 433 VEAL 436
           ++ +
Sbjct: 267 LDVM 270

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L
Sbjct: 1   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L +
Sbjct: 45  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K+++FG +   P   +T +     GT  Y  PE +       + D
Sbjct: 149 -------------ELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   + VA+KT  +      +E +L E   +    H 
Sbjct: 18  IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 72  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ A           C+                KL DFGL++   
Sbjct: 129 SKR-FVHRDIAARNVLVSATD---------CV----------------KLGDFGLSRYM- 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
            L  +
Sbjct: 265 QLSTI 269

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
           +G  VAVK ++    Q  +    EV  + D  H N+V++    +  ++  ++ EF+  G+
Sbjct: 69  SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
           L +      + L       +     + LA+LH +    VI+RD K+ +ILL         
Sbjct: 129 LTD--IVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLS 183
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 341
            FGFC                A++S     KD P+         ++GT  + APE +   
Sbjct: 184 DFGFC----------------AQIS-----KDVPK------RKXLVGTPYWMAPEVISRS 216
Query: 342 HLTSRSDVYSFGVVLLEMLTG 362
              +  D++S G++++EM+ G
Sbjct: 217 LYATEVDIWSLGIMVIEMVDG 237

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
           ++ DA +A N+      I+  +   N++    NA K+ DFG+A+     G+    +  V+
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           GT  Y +PE      + +RSDVYS G VL E+LTG      + P
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 144/375 (38%), Gaps = 81/375 (21%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           F+ E + G+G FG V  G          +  TG++VA+K +  D    ++E L  +  L 
Sbjct: 25  FQVERMAGQGTFGTVQLGK---------EKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 191 DLVHLNLVKLIGYCI---EDDQRLL----VYEFMPRG---SLENHLFRRSLPLPWSIRMK 240
            L H N+V+L  Y     E D+R +    V E++P        N+  R+  P P  I++ 
Sbjct: 75  VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV- 133
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 + +  LH  +   V +RD K  N+L++                          D
Sbjct: 134 FLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEA------------------------D 168
Query: 301 YNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLL 357
              KL DFG AK     E +  ++ +R      Y APE +    H T+  D++S G +  
Sbjct: 169 GTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFA 223
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDP----------------RLEG 401
           EM+ G      +   G+  L E  R      R   R ++P                 +  
Sbjct: 224 EMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFS 281
Query: 402 HFSIKGAQKAAQLAAHCLSRDPKAR---------PLMSEVVEALKPLPNLKDMASSSYYF 452
             S+K A++A  L +  L   P+ R         P   E+ +    LPN KD+    + F
Sbjct: 282 DHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRF 341
Query: 453 QTMQAERIGSSPNTR 467
              + E +  +   +
Sbjct: 342 LPNEIEVMSEAQKAK 356

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 123/326 (37%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
           + S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L
Sbjct: 1   MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
               L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L +
Sbjct: 45  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
            S          I    A  L++ H    + VI+RD K  N+LL        G  G    
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
                          K++DFG +   P   +  +     GT  Y  PE +       + D
Sbjct: 149 -------------ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           ++S GV+  E L G+   + N     +  +                   R+E  F     
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
           + A  L +  L  +P  RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 121/322 (37%), Gaps = 71/322 (22%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           T +DL +  R       LG G FG V    +EE  +       GL   +KT+N D  Q  
Sbjct: 19  TIDDLFIFKRK------LGSGAFGDVH--LVEERSS-------GLERVIKTINKDRSQVP 63
Query: 180 KEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPW 235
            E + AE+  L  L H N++K+     +     +V E    G L   +     R   L  
Sbjct: 64  MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
               ++       LA+ H +    V+++D K  NIL                        
Sbjct: 124 GYVAELMKQMMNALAYFHSQH---VVHKDLKPENIL------------------------ 156
Query: 296 MLFQDYN----AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
             FQD +     K+ DFGLA+     +    ST   GT  Y APE V    +T + D++S
Sbjct: 157 --FQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFKRDVTFKCDIWS 210
Query: 352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA 411
            GVV+  +LTG                 +  P+        R + P            +A
Sbjct: 211 AGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE---CRPLTP------------QA 255
Query: 412 AQLAAHCLSRDPKARPLMSEVV 433
             L    L++DP+ RP  ++V+
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVL 277

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 122/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           S+ R++   D ++     RP   LG+G FG V+            +  +   +A+K L  
Sbjct: 1   SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 44
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
             L+      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S
Sbjct: 45  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
                     I    A  L++ H    + VI+RD K  N+LL        G  G      
Sbjct: 105 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 146
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K++DFG +   P   +      + GT  Y  PE +       + D++
Sbjct: 147 -----------ELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S GV+  E L G+   + N     +  +                   R+E  F     + 
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 233
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
           A  L +  L  +P  RP++ EV+E
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVLE 257

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 38/227 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG G FG V K   EE  T       GL +A K +   G++  +E   E++ +  L H 
Sbjct: 96  ILGGGRFGQVHK--CEETAT-------GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           NL++L       +  +LV E++  G L + +   S  L     +       +G+  +H  
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            +  +++ D K  NIL              C+                K+ DFGLA+   
Sbjct: 205 -QMYILHLDLKPENIL--------------CVNRDA---------KQIKIIDFGLARRYK 240
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
             +K  V+    GT  + APE V    ++  +D++S GV+   +L+G
Sbjct: 241 PREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 116/311 (37%), Gaps = 63/311 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 183
           A  +F     LG+G FG V+    ++             +A+K L    L+      +  
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRK---------FILALKVLFKAQLEKAGVEHQLR 53
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            EV     L H N+++L GY  +  +  L+ E+ P G++   L + S          I  
Sbjct: 54  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT- 112
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A  L++ H    + VI+RD K  N+LL        G  G                   
Sbjct: 113 ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG-----------------EL 144
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           K++DFG +   P   +T +     GT  Y  PE +       + D++S GV+  E L G+
Sbjct: 145 KIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
              + N     +  +                   R+E  F     + A  L +  L  +P
Sbjct: 201 PPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNP 242
Query: 424 KARPLMSEVVE 434
             RP++ EV+E
Sbjct: 243 SQRPMLREVLE 253

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   L VA+KT  +      +E +L E   +    H 
Sbjct: 46  IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 100 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 156
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 157 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 189
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 190 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 244
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 245 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 292
Query: 435 ALKPL 439
            L  +
Sbjct: 293 QLSTI 297

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   + VA+KT  +      +E +L E   +    H 
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 508
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 509 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSR-YM 541
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 596
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 597 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 644
Query: 435 ALKPL 439
            L  +
Sbjct: 645 QLSTI 649

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   L VA+KT  +      +E +L E   +    H 
Sbjct: 23  IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 77  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 134 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 221
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 222 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 269
Query: 435 ALKPL 439
            L  +
Sbjct: 270 QLSTI 274

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 113/285 (39%), Gaps = 62/285 (21%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN-----LVKLIGYCIEDDQRLLVYEF 216
           TG  +AVK +      G+KE    +    D+V  +     +V+  G  I +    +  E 
Sbjct: 49  TGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105
Query: 217 MPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV 275
           M  G+    L +R   P+P  I  K+ +   K L +L E+    VI+RD K SNILLD  
Sbjct: 106 M--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLD-- 159
Query: 276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 335
                                  +    KL DFG++  G   D      R  G   Y AP
Sbjct: 160 -----------------------ERGQIKLCDFGIS--GRLVD-DKAKDRSAGCAAYMAP 193
Query: 336 EYVMTGHLTS-----RSDVYSFGVVLLEMLTGRRSMDKNRPNGEH-NLVEWARPHLGERR 389
           E +     T      R+DV+S G+ L+E+ TG+      + + E    V    P      
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP------ 247
Query: 390 RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  P L GH    G  ++      CL++D + RP  ++++E
Sbjct: 248 -------PLLPGHMGFSGDFQS--FVKDCLTKDHRKRPKYNKLLE 283

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   L VA+KT  +      +E +L E   +    H 
Sbjct: 21  IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 75  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 131
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 132 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 165 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 220 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 267
Query: 435 ALKPL 439
            L  +
Sbjct: 268 QLSTI 272

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   L VA+KT  +      +E +L E   +    H 
Sbjct: 20  IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 74  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 131 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 163
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 164 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 218
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 219 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 266
Query: 435 ALKPL 439
            L  +
Sbjct: 267 QLSTI 271

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   L VA+KT  +      +E +L E   +    H 
Sbjct: 15  IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 69  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 125
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 126 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 158
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 213
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 214 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 261
Query: 435 ALKPL 439
            L  +
Sbjct: 262 QLSTI 266

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 121/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAVK ++   L     ++   EV  +  L H N+VKL      +    LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
           G + ++L           RMK     AK       + + H+   + +++RD K  N+LLD
Sbjct: 98  GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
           A                         D N K++DFG + +   G+K        G+  YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
           APE            DV+S GV+L  +++G      + P    NL E     L  + R  
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
           FY   D   L   F I    K   L      R         E+   ++PLP+ KD     
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
            M S  Y  + +Q   +G   N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 71/306 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
            LG+GGF   F+  I +  T  V  G    +  K+L     Q  K  + E++    L H 
Sbjct: 48  FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 101
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
           ++V   G+  ++D   +V E   R SL E H  R++L  P   + +R +I LG      +
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 156
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      VI+RD K  N+ L+                         +D   K+ DFGLA
Sbjct: 157 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 188
Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
            K   +G++  V   + GT  Y APE +     +   DV+S G ++  +L G       +
Sbjct: 189 TKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------K 238
Query: 371 PNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           P  E + ++    +L  ++  Y +   I+P             AA L    L  DP ARP
Sbjct: 239 PPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPTARP 284
Query: 428 LMSEVV 433
            ++E++
Sbjct: 285 TINELL 290

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   L VA+KT  +      +E +L E   +    H 
Sbjct: 18  IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 72  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 129 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
            L  +
Sbjct: 265 QLSTI 269

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    ++         +   +A+K L    L
Sbjct: 6   RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 49
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 110 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 148
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +  +     GT  Y  PE +       + D++S G
Sbjct: 149 --------ELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N                   +  Y+ I  R+E  F     + A  
Sbjct: 197 VLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTFPDFVTEGARD 238
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+    ++         +   +A+K L    L
Sbjct: 6   RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 49
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 110 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 148
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +  +     GT  Y  PE +       + D++S G
Sbjct: 149 --------ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 238
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+            +  +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +  +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
           +LG+G FG V K              T    AVK +N    +       L EV  L  L 
Sbjct: 29  MLGKGSFGEVLKCK---------DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N++KL     +     +V E    G L + + +R          +I      G+ ++H
Sbjct: 80  HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH 138
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
           +     +++RD K  NILL++                        +D + K+ DFGL+  
Sbjct: 139 K---HNIVHRDLKPENILLESKE----------------------KDCDIKIIDFGLSTC 173
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
             +   T +  R+ GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 174 FQQN--TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   + VA+KT  +      +E +L E   +    H 
Sbjct: 18  IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 72  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 129 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYME 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           +      S   +    + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 163 DSTXXKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
            L  +
Sbjct: 265 QLSTI 269

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 71/306 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
            LG+GGF   F+  I +  T  V  G    +  K+L     Q  K  + E++    L H 
Sbjct: 46  FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 99
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
           ++V   G+  ++D   +V E   R SL E H  R++L  P   + +R +I LG      +
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 154
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      VI+RD K  N+ L+                         +D   K+ DFGLA
Sbjct: 155 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 186
Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
            K   +G++  V   + GT  Y APE +     +   DV+S G ++  +L G       +
Sbjct: 187 TKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------K 236
Query: 371 PNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           P  E + ++    +L  ++  Y +   I+P             AA L    L  DP ARP
Sbjct: 237 PPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPTARP 282
Query: 428 LMSEVV 433
            ++E++
Sbjct: 283 TINELL 288

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D ++     RP   LG+G FG V+            +  +   +A+K L    L
Sbjct: 3   RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L++ H    + VI+RD K  N+LL        G  G         
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +  +     GT  Y  PE +       + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+   + N     +  +                   R+E  F     + A  
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 58/254 (22%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW- 182
           +KL   NF    +LG+G FG V             + GT    A+K L  D +    +  
Sbjct: 16  VKLTDFNFL--MVLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDVE 64
Query: 183 --LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLP 234
             + E   L  L     +  +  C +   RL  V E++  G L  H+     F+    + 
Sbjct: 65  CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
           ++  + I      GL FLH+   R +IYRD K  N++LD+                    
Sbjct: 125 YAAEISI------GLFFLHK---RGIIYRDLKLDNVMLDS-------------------- 155
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                + + K++DFG+ K   E     V+TR   GT  Y APE +         D +++G
Sbjct: 156 -----EGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYG 207
Query: 354 VVLLEMLTGRRSMD 367
           V+L EML G+   D
Sbjct: 208 VLLYEMLAGQPPFD 221

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 118/316 (37%), Gaps = 50/316 (15%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAVK ++   L     ++   EV  +  L H N+VKL      +    LV E+   
Sbjct: 31  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
           G + ++L           R K        + + H+   + +++RD K  N+LLDA     
Sbjct: 91  GEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDA----- 141
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
                               D N K++DFG + +   G+K        G+  YAAPE   
Sbjct: 142 --------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQ 178
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR--FYRLID 396
                    DV+S GV+L  +++G      + P    NL E     L  + R  FY   D
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 232
Query: 397 -PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD------MASSS 449
              L   F I    K   L      R         E+   ++PLP+ KD      M S  
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTELMVSMG 292
Query: 450 YYFQTMQAERIGSSPN 465
           Y  + +Q   +G   N
Sbjct: 293 YTREEIQDSLVGQRYN 308

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 120/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAVK ++   L     ++   EV  +  L H N+VKL      +    LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
           G + ++L           RMK     AK       + + H+   + +++RD K  N+LLD
Sbjct: 98  GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
           A                         D N K++DFG + +   G+K        G+  YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
           APE            DV+S GV+L  +++G      + P    NL E     L  + R  
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
           FY   D   L   F I    K   L      R         E+   + PLP+ KD     
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
            M S  Y  + +Q   +G   N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 71/306 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
            LG+GGF   F+  I +  T  V  G    +  K+L     Q  K  + E++    L H 
Sbjct: 22  FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
           ++V   G+  ++D   +V E   R SL E H  R++L  P   + +R +I LG      +
Sbjct: 76  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 130
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      VI+RD K  N+ L+                         +D   K+ DFGLA
Sbjct: 131 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 162
Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
            K   +G++  V   + GT  Y APE +     +   DV+S G ++  +L G       +
Sbjct: 163 TKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------K 212
Query: 371 PNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           P  E + ++    +L  ++  Y +   I+P             AA L    L  DP ARP
Sbjct: 213 PPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPTARP 258
Query: 428 LMSEVV 433
            ++E++
Sbjct: 259 TINELL 264

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 69/322 (21%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 188
           ++  + ++G G    V   +      AP K      VA+K +N +  Q    E L E+  
Sbjct: 11  DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 61
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKI 241
           +    H N+V      +  D+  LV + +  GS+ +   H+      +S  L  S    I
Sbjct: 62  MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GL +LH+  +   I+RD K  NILL                          +D 
Sbjct: 122 LREVLEGLEYLHKNGQ---IHRDVKAGNILLG-------------------------EDG 153
Query: 302 NAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHLTSRSDVYSFGVVL 356
           + +++DFG++     G +  +  V    +GT  + APE +  + G+   ++D++SFG+  
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITA 212
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA----- 411
           +E+ TG     K  P     L     P             P LE     K   K      
Sbjct: 213 IELATGAAPYHKYPPMKVLMLTLQNDP-------------PSLETGVQDKEMLKKYGKSF 259
Query: 412 AQLAAHCLSRDPKARPLMSEVV 433
            ++ + CL +DP+ RP  +E++
Sbjct: 260 RKMISLCLQKDPEKRPTAAELL 281

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 120/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAVK ++   L     ++   EV  +  L H N+VKL      +    LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
           G + ++L           RMK     AK       + + H+   + +++RD K  N+LLD
Sbjct: 98  GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
           A                         D N K++DFG + +   G+K        G   YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDA---FCGAPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
           APE            DV+S GV+L  +++G      + P    NL E     L  + R  
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
           FY   D   L   F I    K   L      R         E+   ++PLP+ KD     
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
            M S  Y  + +Q   +G   N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 69/322 (21%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 188
           ++  + ++G G    V   +      AP K      VA+K +N +  Q    E L E+  
Sbjct: 16  DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 66
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKI 241
           +    H N+V      +  D+  LV + +  GS+ +   H+      +S  L  S    I
Sbjct: 67  MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GL +LH+  +   I+RD K  NILL                          +D 
Sbjct: 127 LREVLEGLEYLHKNGQ---IHRDVKAGNILLG-------------------------EDG 158
Query: 302 NAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHLTSRSDVYSFGVVL 356
           + +++DFG++     G +  +  V    +GT  + APE +  + G+   ++D++SFG+  
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITA 217
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA----- 411
           +E+ TG     K  P     L     P             P LE     K   K      
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDP-------------PSLETGVQDKEMLKKYGKSF 264
Query: 412 AQLAAHCLSRDPKARPLMSEVV 433
            ++ + CL +DP+ RP  +E++
Sbjct: 265 RKMISLCLQKDPEKRPTAAELL 286

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 41/230 (17%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDL 192
            +LG+G FG V K              T    AVK +N    +       L EV  L  L
Sbjct: 28  CMLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N++KL     +     +V E    G L + + +R          +I      G+ ++
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H+     +++RD K  NILL++                        +D + K+ DFGL+ 
Sbjct: 138 HK---HNIVHRDLKPENILLESKE----------------------KDCDIKIIDFGLST 172
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
              +   T +  R+ GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 173 CFQQN--TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 41/230 (17%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDL 192
            +LG+G FG V K              T    AVK +N    +       L EV  L  L
Sbjct: 28  CMLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N++KL     +     +V E    G L + + +R          +I      G+ ++
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H+     +++RD K  NILL++                        +D + K+ DFGL+ 
Sbjct: 138 HK---HNIVHRDLKPENILLESKE----------------------KDCDIKIIDFGLST 172
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
              +   T +  R+ GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 173 CFQQN--TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
           +GEG FG V +G       +P  P   + VA+KT  +      +E +L E   +    H 
Sbjct: 18  IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           ++VKLIG  I ++   ++ E    G L + L  R   L  +  +  A   +  LA+L  E
Sbjct: 72  HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
           ++R  ++RD    N+L+ +           C+                KL DFGL++   
Sbjct: 129 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
           E    + +++      + APE +     TS SDV+ FGV + E+L     M   +P  G 
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            N     R   GER        P L              L   C + DP  RP  +E+  
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
            L  +
Sbjct: 265 QLSTI 269

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 121/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAV+ ++   L     ++   EV  +  L H N+VKL      +    LV E+   
Sbjct: 38  TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
           G + ++L           RMK     AK       + + H+   + +++RD K  N+LLD
Sbjct: 98  GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
           A                         D N K++DFG + +   G+K        G+  YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
           APE            DV+S GV+L  +++G      + P    NL E     L  + R  
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
           FY   D   L   F I    K   L      R         E+   ++PLP+ KD     
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
            M S  Y  + +Q   +G   N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA++ +N       +  + E+  + +  + N
Sbjct: 28  IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K+ NILL                           D + KL+DFG  A+  P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G 
Sbjct: 169 EQSK---RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 120/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAV+ ++   L     ++   EV  +  L H N+VKL      +    LV E+   
Sbjct: 38  TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
           G + ++L           RMK     AK       + + H+   + +++RD K  N+LLD
Sbjct: 98  GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
           A                         D N K++DFG + +   G+K        G+  YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKL---DEFCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
           APE            DV+S GV+L  +++G    D        NL E     L  + R  
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
           FY   D   L   F I    K   L      R         E+   ++PLP+ KD     
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
            M S  Y  + +Q   +G   N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA++ +N       +  + E+  + +  + N
Sbjct: 28  IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K+ NILL                           D + KL+DFG  A+  P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G 
Sbjct: 169 EQSK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 64/260 (24%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
           RKFT +D  +     RP   LG+G FG V+    ++N     K    L V  K+ L  +G
Sbjct: 9   RKFTIDDFDIV----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
           ++   +   E+     L H N++++  Y  +  +  L+ EF PRG L   L +       
Sbjct: 57  VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
                      +   F+ E A       ER VI+RD K  N+L+               Y
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG--------------Y 149
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
            G             K++DFG +   P      +  R M GT  Y  PE +       + 
Sbjct: 150 KG-----------ELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 348 DVYSFGVVLLEMLTGRRSMD 367
           D++  GV+  E L G    D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 77/309 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
            LG+GGF   F+  I +  T  V  G    +  K+L     Q  K  + E++    L H 
Sbjct: 28  FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
           ++V   G+  ++D   +V E   R SL E H  R++L  P   + +R +I LG      +
Sbjct: 82  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 136
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      VI+RD K  N+ L+                         +D   K+ DFGLA
Sbjct: 137 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 168
Query: 312 K----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
                DG E  KT     + GT  Y APE +     +   DV+S G ++  +L G     
Sbjct: 169 TKVEYDG-ERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG----- 217
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
             +P  E + ++    +L  ++  Y +   I+P             AA L    L  DP 
Sbjct: 218 --KPPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPT 261
Query: 425 ARPLMSEVV 433
           ARP ++E++
Sbjct: 262 ARPTINELL 270

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA++ +N       +  + E+  + +  + N
Sbjct: 28  IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K+ NILL                           D + KL+DFG  A+  P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G 
Sbjct: 169 EQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA++ +N       +  + E+  + +  + N
Sbjct: 29  IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 80  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 137
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+RD K+ NILL                           D + KL+DFG  A+  P
Sbjct: 138 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G 
Sbjct: 170 EQSK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 42/247 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178
           F  +   + +  ++ + +LG+G FG V                TG   AVK ++   ++ 
Sbjct: 22  FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 72
Query: 179 HKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
             +    L EV  L  L H N++KL  +  +     LV E    G L + +  R      
Sbjct: 73  KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSE 131
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
               +I      G+ ++H+     +++RD K  N+LL++                     
Sbjct: 132 VDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKS------------------- 169
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
              +D N ++ DFGL+       K       +GT  Y APE V+ G    + DV+S GV+
Sbjct: 170 ---KDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVI 222
Query: 356 LLEMLTG 362
           L  +L+G
Sbjct: 223 LYILLSG 229

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 77/309 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
            LG+GGF   F+  I +  T  V  G    +  K+L     Q  K  + E++    L H 
Sbjct: 24  FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
           ++V   G+  ++D   +V E   R SL E H  R++L  P   + +R +I LG      +
Sbjct: 78  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      VI+RD K  N+ L+                         +D   K+ DFGLA
Sbjct: 133 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 164
Query: 312 K----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
                DG E  KT     + GT  Y APE +     +   DV+S G ++  +L G     
Sbjct: 165 TKVEYDG-ERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG----- 213
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
             +P  E + ++    +L  ++  Y +   I+P             AA L    L  DP 
Sbjct: 214 --KPPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPT 257
Query: 425 ARPLMSEVV 433
           ARP ++E++
Sbjct: 258 ARPTINELL 266

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 77/309 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
            LG+GGF   F+  I +  T  V  G    +  K+L     Q  K  + E++    L H 
Sbjct: 24  FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
           ++V   G+  ++D   +V E   R SL E H  R++L  P   + +R +I LG      +
Sbjct: 78  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH      VI+RD K  N+ L+                         +D   K+ DFGLA
Sbjct: 133 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 164
Query: 312 K----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
                DG E  KT     + GT  Y APE +     +   DV+S G ++  +L G     
Sbjct: 165 TKVEYDG-ERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG----- 213
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
             +P  E + ++    +L  ++  Y +   I+P             AA L    L  DP 
Sbjct: 214 --KPPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPT 257
Query: 425 ARPLMSEVV 433
           ARP ++E++
Sbjct: 258 ARPTINELL 266

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 64/260 (24%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
           RKFT +D  +     RP   LG+G FG V+    ++N     K    L V  K+ L  +G
Sbjct: 10  RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 57
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
           ++   +   E+     L H N++++  Y  +  +  L+ EF PRG L   L +       
Sbjct: 58  VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 110
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
                      +   F+ E A       ER VI+RD K  N+L+               Y
Sbjct: 111 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG--------------Y 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
            G             K++DFG +   P      +  R M GT  Y  PE +       + 
Sbjct: 151 KG-----------ELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 348 DVYSFGVVLLEMLTGRRSMD 367
           D++  GV+  E L G    D
Sbjct: 195 DLWCAGVLCYEFLVGMPPFD 214

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 47/238 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLV 193
           LG G FG V  G  E          TG  VAVK LN   ++      +   E+  L    
Sbjct: 24  LGVGTFGKVKVGKHE---------LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H +++KL           +V E++  G L +++ +    L      ++      G+ + H
Sbjct: 75  HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCH 133
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                 V++RD K  N+LLDA                           NAK++DFGL+  
Sbjct: 134 RHM---VVHRDLKPENVLLDA-------------------------HMNAKIADFGLSNM 165
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTGRRSMDKN 369
             +G+    S    G+  YAAPE V++G L +    D++S GV+L  +L G    D +
Sbjct: 166 MSDGEFLRXSC---GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 45/170 (26%)
Query: 203 YC-IEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEA 256
           +C  +DD+ L +V E+MP G L N +    +P  W    +  + +AL A   +  +H   
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH--- 197
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
                 RD K  N+LLD        K G                 + KL+DFG      E
Sbjct: 198 ------RDVKPDNMLLD--------KHG-----------------HLKLADFGTCMKMDE 226
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
               H  T V GT  Y +PE + +    G+     D +S GV L EML G
Sbjct: 227 TGMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
           ++ + +LG+G FG V   K  I           TG   AVK ++   ++   +    L E
Sbjct: 51  YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           V  L  L H N++KL  +  +     LV E    G L + +  R          +I    
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 158
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             G+ ++H+     +++RD K  N+LL++                        +D N ++
Sbjct: 159 LSGITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 193
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            DFGL+       K       +GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 194 IDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 64/251 (25%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPG----TGLTVAVKTLNHDGLQ--GHKEWL 183
           N+R +  +G+G F             A VK      TG  VAVK ++   L     ++  
Sbjct: 16  NYRLQKTIGKGNF-------------AKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            EV  +  L H N+VKL      +    LV E+   G + ++L           RMK   
Sbjct: 63  REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------RMKEKE 115
Query: 244 GAAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
             AK       + + H+   + +++RD K  N+LLD                        
Sbjct: 116 ARAKFRQIVSAVQYCHQ---KYIVHRDLKAENLLLDG----------------------- 149
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS-RSDVYSFGVVL 356
             D N K++DFG + +   G+K        G+  YAAPE            DV+S GV+L
Sbjct: 150 --DMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 357 LEMLTGRRSMD 367
             +++G    D
Sbjct: 205 YTLVSGSLPFD 215

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +  + W  E   
Sbjct: 4   RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 49
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
              ++  H N++  I    +D+    Q  LV ++   GSL ++L R ++ +   I  K+A
Sbjct: 50  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 107
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           L  A GLA LH E      +P I +RD K+ NIL+         K G C           
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 149
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
                  ++D GLA +     D   ++    +GT  Y APE     +   H  S  R+D+
Sbjct: 150 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 202
Query: 350 YSFGVVLLEM 359
           Y+ G+V  E+
Sbjct: 203 YAMGLVFWEI 212

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
           ++ + +LG+G FG V   K  I           TG   AVK ++   ++   +    L E
Sbjct: 52  YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           V  L  L H N++KL  +  +     LV E    G L + +  R          +I    
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 159
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             G+ ++H+     +++RD K  N+LL++                        +D N ++
Sbjct: 160 LSGITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 194
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            DFGL+       K       +GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 195 IDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +  + W  E   
Sbjct: 9   RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 54
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
              ++  H N++  I    +D+    Q  LV ++   GSL ++L R ++ +   I  K+A
Sbjct: 55  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 112
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           L  A GLA LH E      +P I +RD K+ NIL+         K G C           
Sbjct: 113 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 154
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
                  ++D GLA +     D   ++    +GT  Y APE     +   H  S  R+D+
Sbjct: 155 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 207
Query: 350 YSFGVVLLEM 359
           Y+ G+V  E+
Sbjct: 208 YAMGLVFWEI 217

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
           ++ + +LG+G FG V   K  I           TG   AVK ++   ++   +    L E
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           V  L  L H N++KL  +  +     LV E    G L + +  R          +I    
Sbjct: 77  VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 135
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             G+ ++H+     +++RD K  N+LL++                        +D N ++
Sbjct: 136 LSGITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 170
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            DFGL+       K       +GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 171 IDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +  + W  E   
Sbjct: 3   RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 48
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
              ++  H N++  I    +D+    Q  LV ++   GSL ++L R ++ +   I  K+A
Sbjct: 49  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 106
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           L  A GLA LH E      +P I +RD K+ NIL+         K G C           
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 148
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
                  ++D GLA +     D   ++    +GT  Y APE     +   H  S  R+D+
Sbjct: 149 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201
Query: 350 YSFGVVLLEM 359
           Y+ G+V  E+
Sbjct: 202 YAMGLVFWEI 211

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 91/234 (38%), Gaps = 42/234 (17%)
Query: 137 LGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
           LG G +G    C  K    E     +K            N +  + H+E   E++ L  L
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N++KL     +     LV EF   G L   +  R           I      G+ +L
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL 162
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-- 310
           H   +  +++RD K  NILL+                    N++L    N K+ DFGL  
Sbjct: 163 H---KHNIVHRDIKPENILLENK------------------NSLL----NIKIVDFGLSS 197
Query: 311 --AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
             +KD    D+       +GT  Y APE V+      + DV+S GV++  +L G
Sbjct: 198 FFSKDYKLRDR-------LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 130 NFRPESLLGEGGFGCVFKG---------WIEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 177
           +F   ++LG+G FG V K           I++      K  T L+  + + +LNH   ++
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
            +  WL   NF         VK +    +     +  E+   G+L + +   +L      
Sbjct: 67  YYAAWLERRNF---------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
             ++     + L+++H +    +I+RD K  NI +D  R    G FG             
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA----------- 163
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVL 356
            ++ +  L    L      G   ++ T  +GT  Y A E +  TGH   + D+YS G++ 
Sbjct: 164 -KNVHRSLDILKLDSQNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 357 LEML 360
            EM+
Sbjct: 222 FEMI 225

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +  + W  E   
Sbjct: 6   RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 51
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
              ++  H N++  I    +D+    Q  LV ++   GSL ++L R ++ +   I  K+A
Sbjct: 52  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 109
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           L  A GLA LH E      +P I +RD K+ NIL+         K G C           
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 151
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
                  ++D GLA +     D   ++    +GT  Y APE     +   H  S  R+D+
Sbjct: 152 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 204
Query: 350 YSFGVVLLEM 359
           Y+ G+V  E+
Sbjct: 205 YAMGLVFWEI 214

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +  + W  E   
Sbjct: 29  RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 74
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
              ++  H N++  I    +D+    Q  LV ++   GSL ++L R ++ +   I  K+A
Sbjct: 75  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 132
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           L  A GLA LH E      +P I +RD K+ NIL+         K G C           
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 174
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
                  ++D GLA +     D   ++    +GT  Y APE     +   H  S  R+D+
Sbjct: 175 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 227
Query: 350 YSFGVVLLEM 359
           Y+ G+V  E+
Sbjct: 228 YAMGLVFWEI 237

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 110/275 (40%), Gaps = 74/275 (26%)
Query: 109 ELKVASRLRKFTFND----LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL 164
           E K A+ + KF  N     +KL   NF    +LG+G FG V             + GT  
Sbjct: 319 EEKTANTISKFDNNGNRDRMKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDE 367
Query: 165 TVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIG---------YCIEDDQRL-LVY 214
             AVK L  D +      + + +    +V   ++ L G          C +   RL  V 
Sbjct: 368 LYAVKILKKDVV------IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 421
Query: 215 EFMPRGSLENHL-----FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
           E++  G L  H+     F+    + ++  + I      GL FL  +    +IYRD K  N
Sbjct: 422 EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQSKG---IIYRDLKLDN 472
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-G 328
           ++LD+                         + + K++DFG+ K   E     V+T+   G
Sbjct: 473 VMLDS-------------------------EGHIKIADFGMCK---ENIWDGVTTKXFCG 504
Query: 329 TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           T  Y APE +         D ++FGV+L EML G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 114/316 (36%), Gaps = 50/316 (15%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VAVK ++   L     ++   EV     L H N+VKL      +    LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
           G + ++L           R K        + + H+   + +++RD K  N+LLDA     
Sbjct: 98  GEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDA----- 148
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
                               D N K++DFG + +   G+K        G   YAAPE   
Sbjct: 149 --------------------DXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQ 185
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR--FYRLID 396
                    DV+S GV+L  +++G    D        NL E     L  + R  FY   D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPFYXSTD 239
Query: 397 -PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD------MASSS 449
              L   F I    K   L      R         E+   ++PLP+ KD        S  
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKDPRRTELXVSXG 299
Query: 450 YYFQTMQAERIGSSPN 465
           Y  + +Q   +G   N
Sbjct: 300 YTREEIQDSLVGQRYN 315

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +  + W  E   
Sbjct: 42  RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 87
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
              ++  H N++  I    +D+    Q  LV ++   GSL ++L R ++ +   I  K+A
Sbjct: 88  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 145
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           L  A GLA LH E      +P I +RD K+ NIL+         K G C           
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 187
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
                  ++D GLA +     D   ++    +GT  Y APE     +   H  S  R+D+
Sbjct: 188 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 240
Query: 350 YSFGVVLLEM 359
           Y+ G+V  E+
Sbjct: 241 YAMGLVFWEI 250

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 69/258 (26%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF- 188
           N +   L+G G +G V+KG ++E      +P     VAVK  +    Q    ++ E N  
Sbjct: 14  NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFSFANRQN---FINEKNIY 59
Query: 189 -LGDLVHLNLVKLI--GYCIEDDQR---LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
            +  + H N+ + I     +  D R   LLV E+ P GSL  +L   +    W    ++A
Sbjct: 60  RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLA 117
Query: 243 LGAAKGLAFLHEEAER-----PVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
               +GLA+LH E  R     P I +RD  + N+L+           G C+         
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV--------KNDGTCV--------- 160
Query: 297 LFQDYNAKLSDFGLA------KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS--- 347
                   +SDFGL+      +    G++ + +   +GT  Y APE V+ G +  R    
Sbjct: 161 --------ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXES 211
Query: 348 -----DVYSFGVVLLEML 360
                D+Y+ G++  E+ 
Sbjct: 212 ALKQVDMYALGLIYWEIF 229

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 50/250 (20%)
Query: 130 NFRPESLLGEGGFGCVFKG---------WIEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 177
           +F   ++LG+G FG V K           I++      K  T L+  + + +LNH   ++
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRRSL 231
            +  WL   NF+  +  +     +   +E  +   +Y+ +   +L         LFR+ L
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
                          + L+++H +    +I+RD K  NI +D  R    G FG       
Sbjct: 127 ---------------EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA----- 163
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVY 350
                  ++ +  L    L      G   ++ T  +GT  Y A E +  TGH   + D+Y
Sbjct: 164 -------KNVHRSLDILKLDSQNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 351 SFGVVLLEML 360
           S G++  EM+
Sbjct: 216 SLGIIFFEMI 225

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLV 193
           LG+G +G V+K          +   TG  VAVK +  D  Q   +      E+  L +L 
Sbjct: 17  LGKGAYGIVWKS---------IDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 194 -HLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
            H N+V L+     D+ R   LV+++M     + H   R+  L    +  +     K + 
Sbjct: 67  GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 251 FLHEEAERPVIYRDFKTSNILLDA---VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           +LH      +++RD K SNILL+A   V+  ++G     +      NN+     N    +
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS-INENTEN 179
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           F         D   + T  + T  Y APE ++ +   T   D++S G +L E+L G+
Sbjct: 180 F--------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G+G  G V+           +   TG  VA++ +N       +  + E+  + +  + N
Sbjct: 29  IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           +V  +   +  D+  +V E++  GSL + +    +         +     + L FLH   
Sbjct: 80  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 137
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
              VI+R+ K+ NILL                           D + KL+DFG  A+  P
Sbjct: 138 ---VIHRNIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           E  K    + ++GT  + APE V       + D++S G++ +EM+ G 
Sbjct: 170 EQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 13  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 64  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 122 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 153
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLVH 194
           +GEG +G VFK    E         T   VA+K   L+ D        L E+  L +L H
Sbjct: 10  IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+V+L      D +  LV+EF  +  L+ +    +  L   I         KGL F H 
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH- 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              R V++RD K  N+L++                         ++   KL+DFGLA+  
Sbjct: 119 --SRNVLHRDLKPQNLLIN-------------------------RNGELKLADFGLARAF 151
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSM 366
             G      +  + T  Y  P+ +    L S S D++S G +  E+    R +
Sbjct: 152 --GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
           Y  +DD+ L +V E+MP G L N +    +P  W    +  + +AL A   + F+H    
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 196
Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
                RD K  N+LLD         FG C+                K++  G+ +     
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVR----- 230
Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
                    +GT  Y +PE + +    G+     D +S GV L EML G
Sbjct: 231 -----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
           Y  +DD+ L +V E+MP G L N +    +P  W    +  + +AL A   + F+H    
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 191
Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
                RD K  N+LLD         FG C+                K++  G+ +     
Sbjct: 192 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVR----- 225
Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
                    +GT  Y +PE + +    G+     D +S GV L EML G
Sbjct: 226 -----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
           ++ + +LG+G FG V   K  I           TG   AVK ++   ++   +    L E
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           V  L  L H N+ KL  +  +     LV E    G L + +  R          +I    
Sbjct: 77  VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 135
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             G+ + H+     +++RD K  N+LL++                        +D N ++
Sbjct: 136 LSGITYXHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 170
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            DFGL+       K       +GT  Y APE V+ G    + DV+S GV+L  +L+G
Sbjct: 171 IDFGLSTHFEASKKXKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 62/256 (24%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
           +F P   LG GGFG VF+   + +             A+K +     +  +E  + EV  
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDC---------NYAIKRIRLPNRELAREKVMREVKA 56
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL--ENHLFRRSLPLPW----------- 235
           L  L H  +V+     +E +    +    P+  L  +  L R+     W           
Sbjct: 57  LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 236 -SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
            S+ + I L  A+ + FLH +    +++RD K SNI                     FF 
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNI---------------------FFT 152
Query: 295 NMLFQDYNAKLSDFGL--AKDGPEGDKTHVS--------TRVMGTYGYAAPEYVMTGHLT 344
                D   K+ DFGL  A D  E ++T ++        T  +GT  Y +PE +     +
Sbjct: 153 ----MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208
Query: 345 SRSDVYSFGVVLLEML 360
            + D++S G++L E+L
Sbjct: 209 HKVDIFSLGLILFELL 224

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 15  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
           Y  +DD+ L +V E+MP G L N +    +P  W    +  + +AL A   + F+H    
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 196
Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
                RD K  N+LLD         FG C+                K++  G+ +     
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVR----- 230
Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
                    +GT  Y +PE + +    G+     D +S GV L EML G
Sbjct: 231 -----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG +G V            V   T   VAVK ++    +   +    E+     L H 
Sbjct: 14  LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
           N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ +LH 
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                + +RD K  N+LLD                         +  N K+SDFGLA   
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
              ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 56/135 (41%), Gaps = 34/135 (25%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           +P  I  KI L   K L  L E  +  +I+RD K SNILLD                   
Sbjct: 122 IPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLD------------------- 160
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH----LTSRSD 348
                 +  N KL DFG++  G   D     TR  G   Y APE +           RSD
Sbjct: 161 ------RSGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSD 211
Query: 349 VYSFGVVLLEMLTGR 363
           V+S G+ L E+ TGR
Sbjct: 212 VWSLGITLYELATGR 226

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
           R++T  D  +     RP   LG+G FG V+     ++     K    L V  KT L   G
Sbjct: 7   RQWTLEDFDIG----RP---LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAG 54
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
           ++   +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S     
Sbjct: 55  VE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
                I    A  L++ H    + VI+RD K  N+LL +                   N 
Sbjct: 113 RTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGS-------------------NG 149
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
            L      K++DFG +   P   +T +     GT  Y  PE +       + D++S GV+
Sbjct: 150 EL------KIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 356 LLEMLTG 362
             E L G
Sbjct: 200 CYEFLVG 206

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 80/200 (40%), Gaps = 35/200 (17%)
Query: 167 AVKTLNHDGLQGHKE---WLAEVN-FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL 222
           AVK L    +   KE    ++E N  L ++ H  LV L       D+   V +++  G L
Sbjct: 67  AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
             HL R    L    R   A   A  L +LH      ++YRD K  NILLD+        
Sbjct: 127 FYHLQRERCFLEPRARF-YAAEIASALGYLHSLN---IVYRDLKPENILLDSQ------- 175
Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
            G  +                 L+DFGL K+  E + T  ++   GT  Y APE +    
Sbjct: 176 -GHIV-----------------LTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQP 215
Query: 343 LTSRSDVYSFGVVLLEMLTG 362
                D +  G VL EML G
Sbjct: 216 YDRTVDWWCLGAVLYEMLYG 235

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 40/250 (16%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
           R  +F  N     + N+  +  LG+G F  V +          V   TGL  A K +N  
Sbjct: 15  RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTK 65
Query: 175 GLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 232
            L     ++   E      L H N+V+L     E+    LV++ +  G L   +  R   
Sbjct: 66  KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY 125
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
                   I     + +A+ H      +++R+ K  N+LL A +A+              
Sbjct: 126 SEADASHCIQ-QILESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA----------- 169
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
                      KL+DFGLA +  + +  H      GT GY +PE +     +   D+++ 
Sbjct: 170 ----------VKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWAC 216
Query: 353 GVVLLEMLTG 362
           GV+L  +L G
Sbjct: 217 GVILYILLVG 226

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 35/209 (16%)
Query: 162 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VA+K ++   L     ++   EV  +  L H N+VKL      +    L+ E+   
Sbjct: 36  TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
           G + ++L           R K        + + H+   + +++RD K  N+LLDA     
Sbjct: 96  GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDA----- 146
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
                               D N K++DFG + +   G K        G+  YAAPE   
Sbjct: 147 --------------------DMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQ 183
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMD 367
                    DV+S GV+L  +++G    D
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 212

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQG      E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 221 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 279 AIALCSRLLEYTPTAR 294

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 120/308 (38%), Gaps = 55/308 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G F  +FKG   E G       T   V +K L+       + +    + +  L H +
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV   G C+  D+ +LV EF+  GSL+ +L +    +    ++++A   A  + FL E  
Sbjct: 74  LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+ +    NILL        G   F                  KLSD G++     
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPF-----------------IKLSDPGISITVLP 173
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG----RRSMDKNRP 371
            D   +  R+     +  PE +    +L   +D +SFG  L E+ +G      ++D  R 
Sbjct: 174 KDI--LQERI----PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR- 226
Query: 372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE 431
                     +    E R  ++L  P+         A + A L  +C+  +P  RP    
Sbjct: 227 ----------KLQFYEDR--HQLPAPK---------AAELANLINNCMDYEPDHRPSFRA 265
Query: 432 VVEALKPL 439
           ++  L  L
Sbjct: 266 IIRDLNSL 273

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 47/266 (17%)
Query: 107 EEELKVASRLR--KFTFNDLKLATRNFRPESLLGEGGFGCVF---KGWIEENGTA-PVKP 160
           E+ L V   LR    T +  K+   NF    +LG G +G VF   K    + G    +K 
Sbjct: 30  EQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV 89
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPR 219
               T+  K    +  +  ++ L  +     LV L+      Y  + + +L L+ +++  
Sbjct: 90  LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH------YAFQTETKLHLILDYING 143
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
           G L  HL +R       +++ +       L  LH+     +IYRD K  NILLD+     
Sbjct: 144 GELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHKLG---IIYRDIKLENILLDS----- 194
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
                               + +  L+DFGL+K+    D+T  +    GT  Y AP+ V 
Sbjct: 195 --------------------NGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVR 233
Query: 340 ---TGHLTSRSDVYSFGVVLLEMLTG 362
              +GH     D +S GV++ E+LTG
Sbjct: 234 GGDSGH-DKAVDWWSLGVLMYELLTG 258

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 77/310 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           +GEG FG        E+G   V         +K +N   +     +E   EV  L ++ H
Sbjct: 32  IGEGSFGKAILVKSTEDGRQYV---------IKEINISRMSSKEREESRREVAVLANMKH 82
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-------ENHLFRRSLPLPWSIRMKIALGAAK 247
            N+V+      E+    +V ++   G L       +  LF+    L W +++ +AL    
Sbjct: 83  PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL---- 138
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
               +H+   R +++RD K+ NI L                          +D   +L D
Sbjct: 139 --KHVHD---RKILHRDIKSQNIFLT-------------------------KDGTVQLGD 168
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FG+A+         ++   +GT  Y +PE        ++SD+++ G VL E+ T + + +
Sbjct: 169 FGIAR--VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLID---PRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                   NLV              ++I    P +  H+S       +QL      R+P+
Sbjct: 227 ---AGSMKNLV-------------LKIISGSFPPVSLHYSYDLRSLVSQL----FKRNPR 266
Query: 425 ARPLMSEVVE 434
            RP ++ ++E
Sbjct: 267 DRPSVNSILE 276

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQG      E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRGS--LENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 221 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPE 278
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 279 AIALCSRLLEYTPTAR 294

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 52/239 (21%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 49  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-------FRRSLPLPWSIRMKIALGAA 246
           H N++      I D  R    E M    L  HL         ++  L             
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+                            + K+ 
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTX-------------------------DLKIC 186
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+L++            C               + K+ 
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTT----------C---------------DLKIC 186
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   PE D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 187 DFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 61/267 (22%)
Query: 113 ASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
           A  L +   + L+     F    L+G G +G V+KG         VK  TG   A+K ++
Sbjct: 8   ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG-------RHVK--TGQLAAIKVMD 58
Query: 173 HDGLQGHKEWLAEVNFLGDLVH-LNLVKLIGYCIE------DDQRLLVYEFMPRGSLENH 225
             G +  +E   E+N L    H  N+    G  I+      DDQ  LV EF   GS+ + 
Sbjct: 59  VTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 226 LFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
           +      +L   W     I     +GL+ LH+     VI+RD K  N+LL          
Sbjct: 118 IKNTKGNTLKEEWI--AYICREILRGLSHLHQHK---VIHRDIKGQNVLLT--------- 163
Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYVMT 340
                           ++   KL DFG++    + D+T V  R   +GT  + APE +  
Sbjct: 164 ----------------ENAEVKLVDFGVS---AQLDRT-VGRRNTFIGTPYWMAPEVIAC 203
Query: 341 GH-----LTSRSDVYSFGVVLLEMLTG 362
                     +SD++S G+  +EM  G
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 38/211 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
           TG  VAVK LN   ++      +   E+  L    H +++KL           +V E++ 
Sbjct: 35  TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
            G L +++ +         R ++       + + H      V++RD K  N+LLDA    
Sbjct: 95  GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA---- 146
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
                                  NAK++DFGL+    +G+    S    G+  YAAPE V
Sbjct: 147 ---------------------HMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-V 181
Query: 339 MTGHLTS--RSDVYSFGVVLLEMLTGRRSMD 367
           ++G L +    D++S GV+L  +L G    D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 162 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
           TG  VA+K ++   L     ++   EV  +  L H N+VKL      +    L+ E+   
Sbjct: 39  TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
           G + ++L           R K        + + H+   + +++RD K  N+LLDA     
Sbjct: 99  GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDA----- 149
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
                               D N K++DFG + +   G K        G   YAAPE   
Sbjct: 150 --------------------DMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQ 186
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMD 367
                    DV+S GV+L  +++G    D
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 215

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLA 250
           L H N+VK  G+  E + + L  E+   G L + +     +P P + R    L A  G+ 
Sbjct: 61  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      + +RD K  N+LLD                         +  N K+SDFGL
Sbjct: 119 YLHGIG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGL 150
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
           A      ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 29  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+                           
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 162 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
           ML+ R
Sbjct: 221 MLSNR 225

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 29  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+            C              
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 162 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
           ML+ R
Sbjct: 221 MLSNR 225

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 79/329 (24%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-- 193
           +G+G +G V++G W             G +VAVK  +    +  + W  E      ++  
Sbjct: 16  VGKGRYGEVWRGLW------------HGESVAVKIFSS---RDEQSWFRETEIYNTVLLR 60
Query: 194 HLNLVKLIGYCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
           H N++  I   +       Q  L+  +   GSL + L R++L    ++R+  A+ AA GL
Sbjct: 61  HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL--AVSAACGL 118
Query: 250 AFLHEE----AERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           A LH E      +P I +RDFK+ N+L+ +           CI                 
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKS-------NLQCCI----------------- 154
Query: 305 LSDFGLAKDGPEG-DKTHVSTR-VMGTYGYAAPEY----VMTGHLTSR--SDVYSFGVVL 356
            +D GLA    +G D   +     +GT  Y APE     + T    S   +D+++FG+VL
Sbjct: 155 -ADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVL 213
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI--DPRLEGHFSIKGAQKAAQL 414
            E+   RR++     NG   +VE  RP       FY ++  DP  E    +    +    
Sbjct: 214 WEI--ARRTI----VNG---IVEDYRPP------FYDVVPNDPSFEDMKKVVCVDQQTPT 258
Query: 415 AAHCLSRDPKARPLMSEVVEALKPLPNLK 443
             + L+ DP    L   + E   P P+ +
Sbjct: 259 IPNRLAADPVLSGLAQMMRECWYPNPSAR 287

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 31  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 82  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+                           
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTS------------------------ 163
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 164 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 359 MLTGR 363
           ML+ R
Sbjct: 223 MLSNR 227

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 29  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+                           
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 162 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
           ML+ R
Sbjct: 221 MLSNR 225

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 31  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 82  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+            C              
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 163
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 164 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 359 MLTGR 363
           ML+ R
Sbjct: 223 MLSNR 227

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 31  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 82  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+            C              
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 163
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 164 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 359 MLTGR 363
           ML+ R
Sbjct: 223 MLSNR 227

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 171
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 172
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 163
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 164
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 49  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 150
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+            C              
Sbjct: 151 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 181
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 182 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 359 MLTGR 363
           ML+ R
Sbjct: 241 MLSNR 245

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+                            + K+ 
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTX-------------------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 33  SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 134
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+                           
Sbjct: 135 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 165
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 166 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 359 MLTGR 363
           ML+ R
Sbjct: 225 MLSNR 229

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 164
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 65  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 170
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 203
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 204 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 259 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 316
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 317 AIALCSRLLEYTPTAR 332

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
           S +GEG +G V   +   N          + VA+K ++    Q + +  L E+  L    
Sbjct: 29  SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           H N++ +               Y ++D     +Y+ +    L N      L         
Sbjct: 80  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL ++H      V++RD K SN+LL+                           
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
            + K+ DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L E
Sbjct: 162 -DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
           ML+ R
Sbjct: 221 MLSNR 225

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQG      E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRGS--LENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 281 ALCSRLLEYTPTAR 294

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 63  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 168
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 201
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 202 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 257 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 314
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 315 AIALCSRLLEYTPTAR 330

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 174
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 166
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 211
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 244
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 245 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 300 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 357
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 358 AIALCSRLLEYTPTAR 373

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 61  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 166
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 199
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 200 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 255 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 312
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 313 AIALCSRLLEYTPTAR 328

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           N+ P+ +LG G       C+ K   +E     +    G + + + +     +  +  L E
Sbjct: 18  NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           V+ L  +  H N+++L      +    LV++ M +G L ++L  + + L      KI   
Sbjct: 74  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 132
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             + +  LH+     +++RD K  NILLD                          D N K
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLD-------------------------DDMNIK 164
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------LTSRSDVYSFGVVLLE 358
           L+DFG +     G+K      V GT  Y APE +               D++S GV++  
Sbjct: 165 LTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 359 MLTG 362
           +L G
Sbjct: 222 LLAG 225

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 55  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 160
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 193
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 194 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 249 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 306
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 307 AIALCSRLLEYTPTAR 322

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 47/237 (19%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFL 189
           F  +  LG G F  V     EE  T       G   AVK +    L+G +  +  E+  L
Sbjct: 24  FEFKETLGTGAFSEVVLA--EEKAT-------GKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAK 247
             + H N+V L       +   LV + +  G L + +  +        S  ++  L A  
Sbjct: 75  RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA-- 132
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL-- 305
            + +LH      +++RD K  N+L                YY         QD  +K+  
Sbjct: 133 -VYYLHRMG---IVHRDLKPENLL----------------YYS--------QDEESKIMI 164
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           SDFGL+K   +GD   V +   GT GY APE +     +   D +S GV+   +L G
Sbjct: 165 SDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 32  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 79  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 170
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 171 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 226 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 283
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 284 AIALCSRLLEYTPTAR 299

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLVH 194
           +GEG +G VFK    E         T   VA+K   L+ D        L E+  L +L H
Sbjct: 10  IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+V+L      D +  LV+EF  +  L+ +    +  L   I         KGL F H 
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH- 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
              R V++RD K  N+L++                         ++   KL++FGLA+  
Sbjct: 119 --SRNVLHRDLKPQNLLIN-------------------------RNGELKLANFGLARAF 151
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSM 366
             G      +  + T  Y  P+ +    L S S D++S G +  E+    R +
Sbjct: 152 --GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 40  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 87  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 145
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 178
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 179 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 234 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 291
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 292 AIALCSRLLEYTPTAR 307

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           N+ P+ +LG G       C+ K   +E     +    G + + + +     +  +  L E
Sbjct: 5   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 60
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           V+ L  +  H N+++L      +    LV++ M +G L ++L  + + L      KI   
Sbjct: 61  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 119
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             + +  LH+     +++RD K  NILLD                          D N K
Sbjct: 120 LLEVICALHK---LNIVHRDLKPENILLD-------------------------DDMNIK 151
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------LTSRSDVYSFGVVLLE 358
           L+DFG +     G+K      V GT  Y APE +               D++S GV++  
Sbjct: 152 LTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 359 MLTG 362
           +L G
Sbjct: 209 LLAG 212

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
           + N+  +  LG+G F  V +          V   TGL  A K +N   L     ++   E
Sbjct: 4   SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 54
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
                 L H N+V+L     E+    LV++ +  G L   +  R           I    
Sbjct: 55  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 113
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            + +A+ H      +++R+ K  N+LL A +A+                         KL
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA---------------------VKL 148
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           +DFGLA +  + +  H      GT GY +PE +     +   D+++ GV+L  +L G
Sbjct: 149 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 61  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 166
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 199
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 200 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 257 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 314
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 315 ALCSRLLEYTPTAR 328

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
           N+ P+ +LG G       C+ K   +E     +    G + + + +     +  +  L E
Sbjct: 18  NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           V+ L  +  H N+++L      +    LV++ M +G L ++L  + + L      KI   
Sbjct: 74  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 132
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             + +  LH+     +++RD K  NILLD                          D N K
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLD-------------------------DDMNIK 164
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------LTSRSDVYSFGVVLLE 358
           L+DFG +     G+K      V GT  Y APE +               D++S GV++  
Sbjct: 165 LTDFGFSCQLDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 359 MLTG 362
           +L G
Sbjct: 222 LLAG 225

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG AK    G+   +++ +R      Y APE +      TS  DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
                +  +G   LVE  +      R   R ++        P+++ H     F  +   +
Sbjct: 221 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278
Query: 411 AAQLAAHCLSRDPKAR 426
           A  L +  L   P AR
Sbjct: 279 AIALCSRLLEYTPTAR 294

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
           + N+  +  LG+G F  V +          V   TGL  A K +N   L     ++   E
Sbjct: 5   SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
                 L H N+V+L     E+    LV++ +  G L   +  R           I    
Sbjct: 56  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 114
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            + +A+ H      +++R+ K  N+LL A +A+                         KL
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA---------------------VKL 149
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           +DFGLA +  + +  H      GT GY +PE +     +   D+++ GV+L  +L G
Sbjct: 150 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 39  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 86  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 177
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 178 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 235 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 293 ALCSRLLEYTPTAR 306

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
           + N+  +  LG+G F  V +          V   TGL  A K +N   L     ++   E
Sbjct: 5   SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
                 L H N+V+L     E+    LV++ +  G L   +  R           I    
Sbjct: 56  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 114
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            + +A+ H      +++R+ K  N+LL A +A+                         KL
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA---------------------VKL 149
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           +DFGLA +  + +  H      GT GY +PE +     +   D+++ GV+L  +L G
Sbjct: 150 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 55/249 (22%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA- 184
           +AT  + P + +G G +G V+K            P +G  VA+K++      G    L  
Sbjct: 6   MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGGGGGGGLPI 56
Query: 185 ----EVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP 232
               EV  L  L    H N+V+L+  C     D+ +   LV+E + +  L  +L +   P
Sbjct: 57  STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 233 -LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            LP      +     +GL FLH      +++RD K  NIL+ +                 
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS----------------- 155
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
                       KL+DFGLA+           T V+ T  Y APE ++     +  D++S
Sbjct: 156 --------GGTVKLADFGLARI---YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWS 204
Query: 352 FGVVLLEML 360
            G +  EM 
Sbjct: 205 VGCIFAEMF 213

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 281 ALCSRLLEYTPTAR 294

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 281 ALCSRLLEYTPTAR 294

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 35  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 82  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 173
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 174 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 231 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 288
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 289 ALCSRLLEYTPTAR 302

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 46  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 93  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 151
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 184
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 185 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 242 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 299
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 300 ALCSRLLEYTPTAR 313

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 31  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 78  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 136
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 169
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 170 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 227 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 284
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 285 ALCSRLLEYTPTAR 298

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 70/256 (27%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           +KL   NF    +LG+G FG V             + GT    AVK L  D +      +
Sbjct: 17  MKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDELYAVKILKKDVV------I 59
Query: 184 AEVNFLGDLVHLNLVKLIG---------YCIEDDQRL-LVYEFMPRGSLENHL-----FR 228
            + +    +V   ++ L G          C +   RL  V E++  G L  H+     F+
Sbjct: 60  QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK 119
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
               + ++  + I      GL FL  +    +IYRD K  N++LD+              
Sbjct: 120 EPHAVFYAAEIAI------GLFFLQSKG---IIYRDLKLDNVMLDS-------------- 156
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
                      + + K++DFG+ K   E     V+T+   GT  Y APE +         
Sbjct: 157 -----------EGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 348 DVYSFGVVLLEMLTGR 363
           D ++FGV+L EML G+
Sbjct: 203 DWWAFGVLLYEMLAGQ 218

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 38/211 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
           TG  VAVK LN   ++      +   E+  L    H +++KL           +V E++ 
Sbjct: 35  TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
            G L +++ +         R ++       + + H      V++RD K  N+LLDA    
Sbjct: 95  GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA---- 146
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
                                  NAK++DFGL+    +G+    S    G+  YAAPE V
Sbjct: 147 ---------------------HMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-V 181
Query: 339 MTGHLTS--RSDVYSFGVVLLEMLTGRRSMD 367
           ++G L +    D++S GV+L  +L G    D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 74  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 281 ALCSRLLEYTPTAR 294

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 38/226 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V +          V+  TG     K +N            E++ +  L H  
Sbjct: 59  LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           L+ L     +  + +L+ EF+  G L + +      +  +  +     A +GL  +HE +
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +++ D K  NI+ +  +A +                        K+ DFGLA     
Sbjct: 170 ---IVHLDIKPENIMCETKKASS-----------------------VKIIDFGLATKLNP 203
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            +   V+T    T  +AAPE V    +   +D+++ GV+   +L+G
Sbjct: 204 DEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 39  VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 86  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 177
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 178 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 235 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 293 ALCSRLLEYTPTAR 306

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           ++G G FG V++  + ++G           VA+K +    LQ  +    E+  +  L H 
Sbjct: 28  VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
           N+V+L  +     ++       LV +++P     +  H  R    LP  I +K+ +    
Sbjct: 75  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 133
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + LA++H      + +RD K  N+LLD   A                          KL 
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 166
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
           DFG AK    G+    +   + +  Y APE +      TS  DV+S G VL E+L G+  
Sbjct: 167 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
              +  +G   LVE  +      R   R ++        P+++ H     F  +   +A 
Sbjct: 224 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 281
Query: 413 QLAAHCLSRDPKAR 426
            L +  L   P AR
Sbjct: 282 ALCSRLLEYTPTAR 295

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 41/202 (20%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           +P  I  KIA+   K L  LH  ++  VI+RD K SN+L++A+       FG   Y    
Sbjct: 106 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY---- 159
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
               L  D         +AKD   G K +++   +       PE    G+ + +SD++S 
Sbjct: 160 ----LVDD---------VAKDIDAGCKPYMAPERIN------PELNQKGY-SVKSDIWSL 199
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           G+ ++E+   R   D            W  P   + ++      P+L      K + +  
Sbjct: 200 GITMIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFV 244
Query: 413 QLAAHCLSRDPKARPLMSEVVE 434
              + CL ++ K RP   E+++
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQ 266

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 100/253 (39%), Gaps = 59/253 (23%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
           + +F+ +SLLGEG +G V         +A  KP TG  VA+K +   D        L E+
Sbjct: 10  SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
             L    H N++ +        QR   +E      +   L +  L    S +M       
Sbjct: 61  KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                  + +  LH      VI+RD K SN+L+++                         
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINS------------------------- 147
Query: 300 DYNAKLSDFGLAK--DGPEGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVY 350
           + + K+ DFGLA+  D    D +  +      T  + T  Y APE ++T    SR+ DV+
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 351 SFGVVLLEMLTGR 363
           S G +L E+   R
Sbjct: 208 SCGCILAELFLRR 220

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 119/308 (38%), Gaps = 55/308 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG+G F  +FKG   E G       T   V +K L+       + +    + +  L H +
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV   G C   D+ +LV EF+  GSL+ +L +    +    ++++A   A  + FL E  
Sbjct: 74  LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENT 133
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              +I+ +    NILL        G   F                  KLSD G++     
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPF-----------------IKLSDPGISITVLP 173
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG----RRSMDKNRP 371
            D   +  R+     +  PE +    +L   +D +SFG  L E+ +G      ++D  R 
Sbjct: 174 KDI--LQERI----PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR- 226
Query: 372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE 431
                     +    E R  ++L  P+         A + A L  +C+  +P  RP    
Sbjct: 227 ----------KLQFYEDR--HQLPAPK---------AAELANLINNCMDYEPDHRPSFRA 265
Query: 432 VVEALKPL 439
           ++  L  L
Sbjct: 266 IIRDLNSL 273

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
           +AT  + P + +G G +G V+K            P +G  VA+K++   +G +G     +
Sbjct: 1   MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
            EV  L  L    H N+V+L+  C     D+ +   LV+E + +  L  +L +   P LP
Sbjct: 52  REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
                 +     +GL FLH      +++RD K  NIL+ +        FG          
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------- 158
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
                   A++  + +A D            V+ T  Y APE ++     +  D++S G 
Sbjct: 159 --------ARIYSYQMALDP-----------VVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 355 VLLEML 360
           +  EM 
Sbjct: 200 IFAEMF 205

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 55/237 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
            LG+GGF   ++  I +  T  V  G  +  ++    H      KE ++ E+     L +
Sbjct: 49  FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
            ++V   G+  +DD   +V E   R SL E H  R+++  P   + +R  I     +G+ 
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      VI+RD K  N                     LF N+    D + K+ DFGL
Sbjct: 157 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 188
Query: 311 AK----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           A     DG E  KT     + GT  Y APE +     +   D++S G +L  +L G+
Sbjct: 189 ATKIEFDG-ERKKT-----LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 48/247 (19%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
           R++T  D  +     RP   LG+G FG V+     ++     K    L V  KT L   G
Sbjct: 7   RQWTLEDFDIG----RP---LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAG 54
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
           ++   +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S     
Sbjct: 55  VE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
                I    A  L++ H    + VI+RD K  N+LL +                   N 
Sbjct: 113 RTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGS-------------------NG 149
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
            L      K++DFG +   P   +  +     GT  Y  PE +       + D++S GV+
Sbjct: 150 EL------KIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 356 LLEMLTG 362
             E L G
Sbjct: 200 CYEFLVG 206

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 100/253 (39%), Gaps = 59/253 (23%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
           + +F+ +SLLGEG +G V         +A  KP TG  VA+K +   D        L E+
Sbjct: 10  SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
             L    H N++ +        QR   +E      +   L +  L    S +M       
Sbjct: 61  KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                  + +  LH      VI+RD K SN+L+++                         
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINS------------------------- 147
Query: 300 DYNAKLSDFGLAK--DGPEGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVY 350
           + + K+ DFGLA+  D    D +  +      T  + T  Y APE ++T    SR+ DV+
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 351 SFGVVLLEMLTGR 363
           S G +L E+   R
Sbjct: 208 SCGCILAELFLRR 220

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 38/226 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V +           +  TG   A K +        +    E+  +  L H  
Sbjct: 59  LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV L     +D++ +++YEFM  G L   +      +     ++      KGL  +HE  
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               ++ D K  NI+    R+                          KL DFGL      
Sbjct: 170 ---YVHLDLKPENIMFTTKRSN-----------------------ELKLIDFGLTAHLDP 203
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
                V+T   GT  +AAPE      +   +D++S GV+   +L+G
Sbjct: 204 KQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
           +AT  + P + +G G +G V+K            P +G  VA+K++   +G +G     +
Sbjct: 1   MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
            EV  L  L    H N+V+L+  C     D+ +   LV+E + +  L  +L +   P LP
Sbjct: 52  REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
                 +     +GL FLH      +++RD K  NIL+ +                    
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS-------------------- 147
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
                    KL+DFGLA+             V+ T  Y APE ++     +  D++S G 
Sbjct: 148 -----GGTVKLADFGLARI---YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 355 VLLEML 360
           +  EM 
Sbjct: 200 IFAEMF 205

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 44/233 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG+G +G V+ G    N          + +A+K +     +  +    E+     L H 
Sbjct: 29  VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GLAFL 252
           N+V+ +G   E+    +  E +P GSL   L  +  PL  +    I     +   GL +L
Sbjct: 80  NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYL 138
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H+     +++RD K  N+L++              Y G+            K+SDFG +K
Sbjct: 139 HDNQ---IVHRDIKGDNVLINT-------------YSGVL-----------KISDFGTSK 171
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
                     +    GT  Y APE +  G       +D++S G  ++EM TG+
Sbjct: 172 R--LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           LGEG +  V+KG             T   VA+K +  +  +G     + EV+ L DL H 
Sbjct: 10  LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V L      +    LV+E++ +  L+ +L      +             +GLA+ H +
Sbjct: 61  NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
               V++RD K  N+L++  R E                         KL+DFGLA+   
Sbjct: 120 K---VLHRDLKPQNLLINE-RGE------------------------LKLADFGLARAKS 151
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
              KT+ +  V  T  Y  P+ ++ +   +++ D++  G +  EM TGR
Sbjct: 152 IPTKTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 48/236 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLV 193
           LGEG FG V                T   VA+K ++   L+    H     E+++L  L 
Sbjct: 17  LGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H +++KL          ++V E+   G L +++  +        R +        + + H
Sbjct: 68  HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH 125
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                 +++RD K  N+LLD                          + N K++DFGL+  
Sbjct: 126 RHK---IVHRDLKPENLLLD-------------------------DNLNVKIADFGLSNI 157
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTGRRSMD 367
             +G+    S    G+  YAAPE V+ G L +    DV+S G+VL  ML GR   D
Sbjct: 158 MTDGNFLKTSC---GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 38/226 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V +           +  TG   A K +        +    E+  +  L H  
Sbjct: 165 LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
           LV L     +D++ +++YEFM  G L   +      +     ++      KGL  +HE  
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
               ++ D K  NI+    R+                          KL DFGL      
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNEL-----------------------KLIDFGLTAHLDP 309
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
                V+T   GT  +AAPE      +   +D++S GV+   +L+G
Sbjct: 310 KQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 30  QNLSP---IGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 78  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 167 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
           LTGR
Sbjct: 222 LTGR 225

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
           A + +   + +GEG +G VFK    +NG        G  VA+K +    G +G       
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
            +A +  L    H N+V+L   C       + +  LV+E + +  L  +L +   P +P 
Sbjct: 61  EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
                +     +GL FLH      V++RD K  NIL+ +                     
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS--------------------- 155
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   KL+DFGLA+           T V+ T  Y APE ++     +  D++S G +
Sbjct: 156 ----SGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 356 LLEML 360
             EM 
Sbjct: 209 FAEMF 213

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
            LG+GGF   ++  I +  T  V  G  +  ++    H      KE ++ E+     L +
Sbjct: 49  FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
            ++V   G+  +DD   +V E   R SL E H  R+++  P   + +R  I     +G+ 
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      VI+RD K  N                     LF N+    D + K+ DFGL
Sbjct: 157 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 188
Query: 311 A-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           A K   +G++      + GT  Y APE +     +   D++S G +L  +L G+
Sbjct: 189 ATKIEFDGER---KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 44/233 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG+G +G V+ G    N          + +A+K +     +  +    E+     L H 
Sbjct: 15  VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GLAFL 252
           N+V+ +G   E+    +  E +P GSL   L  +  PL  +    I     +   GL +L
Sbjct: 66  NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYL 124
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H+     +++RD K  N+L++              Y G+            K+SDFG +K
Sbjct: 125 HDNQ---IVHRDIKGDNVLINT-------------YSGVL-----------KISDFGTSK 157
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
                     +    GT  Y APE +  G       +D++S G  ++EM TG+
Sbjct: 158 R--LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T      + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      V++RD K SN+LL+            C               + K+ 
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 171
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           DFGLA+   P+ D T      + T  Y APE ++     ++S D++S G +L EML+ R
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
            LG+GGF   ++  I +  T  V  G  +  ++    H      KE ++ E+     L +
Sbjct: 49  FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
            ++V   G+  +DD   +V E   R SL E H  R+++  P   + +R  I     +G+ 
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      VI+RD K  N                     LF N+    D + K+ DFGL
Sbjct: 157 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 188
Query: 311 A-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           A K   +G++      + GT  Y APE +     +   D++S G +L  +L G+
Sbjct: 189 ATKIEFDGER---KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 32  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 80  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
           LTGR
Sbjct: 224 LTGR 227

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 32  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 80  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
           LTGR
Sbjct: 224 LTGR 227

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 30  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 78  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 167 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
           LTGR
Sbjct: 222 LTGR 225

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 32  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 80  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
           LTGR
Sbjct: 224 LTGR 227

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 27  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 75  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
           LTGR
Sbjct: 219 LTGR 222

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 36  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 84  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 141
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 142 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 172
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 173 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 360 LTGR 363
           LTGR
Sbjct: 228 LTGR 231

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
           +GEG +G V+K           +   G T A+K +      +G+      + E++ L +L
Sbjct: 10  IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+VKL        + +LV+E + +  L+  L      L         L    G+A+ 
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H   +R V++RD K  N+L++                         ++   K++DFGLA+
Sbjct: 117 H---DRRVLHRDLKPQNLLIN-------------------------REGELKIADFGLAR 148
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
               G      T  + T  Y AP+ +M +   ++  D++S G +  EM+ G
Sbjct: 149 --AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 37  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 85  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 142
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 143 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 173
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 360 LTGR 363
           LTGR
Sbjct: 229 LTGR 232

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
           +AT  + P + +G G +G V+K            P +G  VA+K++   +G +G     +
Sbjct: 1   MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
            EV  L  L    H N+V+L+  C     D+ +   LV+E + +  L  +L +   P LP
Sbjct: 52  REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
                 +     +GL FLH      +++RD K  NIL+ +                    
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS-------------------- 147
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
                    KL+DFGLA+             V+ T  Y APE ++     +  D++S G 
Sbjct: 148 -----GGTVKLADFGLARI---YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 355 VLLEML 360
           +  EM 
Sbjct: 200 IFAEMF 205

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 37  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 85  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 142
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 143 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 173
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 360 LTGR 363
           LTGR
Sbjct: 229 LTGR 232

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 30  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 78  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 167 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
           LTGR
Sbjct: 222 LTGR 225

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 24  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 72  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 130 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 160
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 161 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Query: 360 LTGR 363
           LTGR
Sbjct: 216 LTGR 219

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 27  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 75  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
           LTGR
Sbjct: 219 LTGR 222

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
           A + +   + +GEG +G VFK    +NG        G  VA+K +    G +G       
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
            +A +  L    H N+V+L   C       + +  LV+E + +  L  +L +   P +P 
Sbjct: 61  EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
                +     +GL FLH      V++RD K  NIL+ +                     
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS--------------------- 155
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   KL+DFGLA+           T V+ T  Y APE ++     +  D++S G +
Sbjct: 156 ----SGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 356 LLEML 360
             EM 
Sbjct: 209 FAEMF 213

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 31  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 79  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
           LTGR
Sbjct: 223 LTGR 226

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 48  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 96  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 153
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 154 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 184
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 185 CELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 360 LTGR 363
           LTGR
Sbjct: 240 LTGR 243

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 32  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 80  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
           LTGR
Sbjct: 224 LTGR 227

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 44  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 92  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 149
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 150 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 180
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 181 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 360 LTGR 363
           LTGR
Sbjct: 236 LTGR 239

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
            LG+GGF   ++  I +  T  V  G  +  ++    H      KE ++ E+     L +
Sbjct: 33  FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 85
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
            ++V   G+  +DD   +V E   R SL E H  R+++  P   + +R  I     +G+ 
Sbjct: 86  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 140
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH      VI+RD K  N                     LF N+    D + K+ DFGL
Sbjct: 141 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 172
Query: 311 A-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           A K   +G++      + GT  Y APE +     +   D++S G +L  +L G+
Sbjct: 173 ATKIEFDGER---KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 30  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 78  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 167 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
           LTGR
Sbjct: 222 LTGR 225

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 27  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 75  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
           LTGR
Sbjct: 219 LTGR 222

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 21  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 69  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 126
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 127 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 157
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 360 LTGR 363
           LTGR
Sbjct: 213 LTGR 216

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 36  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 84  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 141
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 142 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 172
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 173 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 360 LTGR 363
           LTGR
Sbjct: 228 LTGR 231

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 37  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 85  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 142
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 143 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 173
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 360 LTGR 363
           LTGR
Sbjct: 229 LTGR 232

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 159 KPGTGLTVAVKTLNHDGL-QGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VY 214
           +   G  +  K L++  + +  K+ L +EVN L +L H N+V+     I+     L  V 
Sbjct: 27  RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 215 EFMPRGSLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
           E+   G L + +      R+ L   + +R+   L  A        +    V++RD K +N
Sbjct: 87  EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
           + LD  +                         N KL DFGLA+       T  +   +GT
Sbjct: 147 VFLDGKQ-------------------------NVKLGDFGLAR--ILNHDTSFAKTFVGT 179
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
             Y +PE +       +SD++S G +L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 45  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 93  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 150
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 151 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 181
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 182 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 360 LTGR 363
           LTGR
Sbjct: 237 LTGR 240

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 27  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 75  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 164 SELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
           LTGR
Sbjct: 219 LTGR 222

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 31  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 79  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
           LTGR
Sbjct: 223 LTGR 226

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
           +GEG +G V+K           +   G T A+K +      +G+      + E++ L +L
Sbjct: 10  IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+VKL        + +LV+E + +  L+  L      L         L    G+A+ 
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H   +R V++RD K  N+L++                         ++   K++DFGLA+
Sbjct: 117 H---DRRVLHRDLKPQNLLIN-------------------------REGELKIADFGLAR 148
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
               G      T  + T  Y AP+ +M +   ++  D++S G +  EM+ G
Sbjct: 149 --AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 23  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 71  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 129 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 159
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 160 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 360 LTGR 363
           LTGR
Sbjct: 215 LTGR 218

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 22  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 70  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 127
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 128 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 158
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 159 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 360 LTGR 363
           LTGR
Sbjct: 214 LTGR 217

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
           A + +   + +GEG +G VFK    +NG        G  VA+K +    G +G       
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
            +A +  L    H N+V+L   C       + +  LV+E + +  L  +L +   P +P 
Sbjct: 61  EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
                +     +GL FLH      V++RD K  NIL+ +                     
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS--------------------- 155
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   KL+DFGLA+           T V+ T  Y APE ++     +  D++S G +
Sbjct: 156 ----SGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 356 LLEML 360
             EM 
Sbjct: 209 FAEMF 213

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 31  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 79  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 168 SELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
           LTGR
Sbjct: 223 LTGR 226

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 48  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 96  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 153
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 154 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 184
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 185 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 360 LTGR 363
           LTGR
Sbjct: 240 LTGR 243

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 159 KPGTGLTVAVKTLNHDGL-QGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VY 214
           +   G  +  K L++  + +  K+ L +EVN L +L H N+V+     I+     L  V 
Sbjct: 27  RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 215 EFMPRGSLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
           E+   G L + +      R+ L   + +R+   L  A        +    V++RD K +N
Sbjct: 87  EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
           + LD  +                         N KL DFGLA+       T  +   +GT
Sbjct: 147 VFLDGKQ-------------------------NVKLGDFGLAR--ILNHDTSFAKAFVGT 179
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
             Y +PE +       +SD++S G +L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 22  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 70  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 127
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 128 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 158
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 159 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 360 LTGR 363
           LTGR
Sbjct: 214 LTGR 217

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 51/207 (24%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           +P  I  KIA+   K L  LH +    VI+RD K SN+L++A+       FG   Y    
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY---- 203
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----MTGHLTSRS 347
                  D  AK  D                    G   Y APE +       G+ + +S
Sbjct: 204 -----LVDSVAKTID-------------------AGCKPYMAPERINPELNQKGY-SVKS 238
Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
           D++S G+ ++E+   R   D            W  P   + ++      P+L      K 
Sbjct: 239 DIWSLGITMIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQLPAD---KF 283
Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVVE 434
           + +     + CL ++ K RP   E+++
Sbjct: 284 SAEFVDFTSQCLKKNSKERPTYPELMQ 310

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
           +GEG +G V+K           +   G T A+K +      +G+      + E++ L +L
Sbjct: 10  IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+VKL        + +LV+E + +  L+  L      L         L    G+A+ 
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H   +R V++RD K  N+L++                         ++   K++DFGLA+
Sbjct: 117 H---DRRVLHRDLKPQNLLIN-------------------------REGELKIADFGLAR 148
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
               G      T  + T  Y AP+ +M +   ++  D++S G +  EM+ G
Sbjct: 149 --AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 41/202 (20%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           +P  I  KIA+   K L  LH  ++  VI+RD K SN+L++A+       FG   Y    
Sbjct: 133 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGY---- 186
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
               L  D         +AKD   G K + +   +       PE    G+ + +SD++S 
Sbjct: 187 ----LVDD---------VAKDIDAGCKPYXAPERIN------PELNQKGY-SVKSDIWSL 226
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           G+  +E+   R   D            W  P   + ++      P+L      K + +  
Sbjct: 227 GITXIELAILRFPYDS-----------WGTP-FQQLKQVVEEPSPQLPAD---KFSAEFV 271
Query: 413 QLAAHCLSRDPKARPLMSEVVE 434
              + CL ++ K RP   E+ +
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQ 293

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 53/240 (22%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEV 186
           +R  + LGEG +G V+K          +   T  TVA+K +      +G+ G    + EV
Sbjct: 36  YRRITKLGEGTYGEVYKA---------IDTVTNETVAIKRIRLEHEEEGVPGTA--IREV 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIA--- 242
           + L +L H N+++L    I  + RL L++E+      EN L +     P  + M++    
Sbjct: 85  SLLKELQHRNIIEL-KSVIHHNHRLHLIFEYA-----ENDLKKYMDKNP-DVSMRVIKSF 137
Query: 243 -LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                 G+ F H    R  ++RD K  N+LL    A                        
Sbjct: 138 LYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVL------------------ 176
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
             K+ DFGLA+    G      T  + T  Y  PE ++ + H ++  D++S   +  EML
Sbjct: 177 --KIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 59/253 (23%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
           + +F+ +SLLGEG +G V         +A  KP TG  VA+K +   D        L E+
Sbjct: 10  SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
             L    H N++ +        QR   +E      +   L +  L    S +M       
Sbjct: 61  KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                  + +  LH      VI+RD K SN+L+++                         
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINS------------------------- 147
Query: 300 DYNAKLSDFGLAK--DGPEGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVY 350
           + + K+ DFGLA+  D    D +  +         + T  Y APE ++T    SR+ DV+
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 351 SFGVVLLEMLTGR 363
           S G +L E+   R
Sbjct: 208 SCGCILAELFLRR 220

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
           +F+   +LGEG F  V             +  T    A+K L   H   +    ++  E 
Sbjct: 38  DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 88
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           + +  L H   VKL  +C +DD++L     +   G L  ++ R+      +         
Sbjct: 89  DVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 146
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              L +LH +    +I+RD K  NILL+                         +D + ++
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 178
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           +DFG AK      K   +   +GT  Y +PE +        SD+++ G ++ +++ G
Sbjct: 179 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 67/264 (25%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
           N+  + L+G G +G V+  +            T   VA+K +N   + L   K  L E+ 
Sbjct: 27  NYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 188 FLGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            L  L    +++L    I DD      L +   +    L+  LF+  + L       I  
Sbjct: 78  ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEHIKTILY 136
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
               G  F+HE     +I+RD K +N LL+                         QD + 
Sbjct: 137 NLLLGENFIHESG---IIHRDLKPANCLLN-------------------------QDCSV 168
Query: 304 KLSDFGLAKD-------------------GPEGD--KTHVSTRVMGTYGYAAPEYVMTGH 342
           K+ DFGLA+                    GP     K  +++ V+ T  Y APE ++   
Sbjct: 169 KVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQE 227
Query: 343 LTSRS-DVYSFGVVLLEMLTGRRS 365
             ++S D++S G +  E+L   +S
Sbjct: 228 NYTKSIDIWSTGCIFAELLNMLQS 251

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 56/249 (22%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV-- 186
           + + P+ ++G G    V +          V   TG   AVK +     +   E L EV  
Sbjct: 94  QKYDPKDVIGRGVSSVVRRC---------VHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 187 ------NFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
                 + L  +  H +++ LI          LV++ M +G L ++L  + + L      
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETR 203
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            I     + ++FLH      +++RD K  NILLD                    +NM   
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLD--------------------DNM--- 237
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS------RSDVYSFG 353
               +LSDFG +     G+K      + GT GY APE +      +        D+++ G
Sbjct: 238 --QIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACG 292
Query: 354 VVLLEMLTG 362
           V+L  +L G
Sbjct: 293 VILFTLLAG 301

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
           L EV  L  L H N++KL  +  +     LV E    G L + +  R     +  ++ MK
Sbjct: 69  LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
             L    G  +LH+     +++RD K  N+LL++                        +D
Sbjct: 129 QVLS---GTTYLHK---HNIVHRDLKPENLLLESKS----------------------RD 160
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFGL+     G K       +GT  Y APE V+      + DV+S GV+L  +L
Sbjct: 161 ALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILL 216
Query: 361 TG 362
            G
Sbjct: 217 CG 218

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 101/254 (39%), Gaps = 60/254 (23%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           +   R+      +G+G +G V++G W  EN            VAVK  +    +  K W 
Sbjct: 4   RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 184 AEVNFLGDLVHLNLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
            E   L + V L    ++G+   D        Q  L+  +   GSL ++L   +L     
Sbjct: 49  RETE-LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 107
Query: 237 IRMKIALGAAKGLAFLHEEA----ERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
           +R  I L  A GLA LH E      +P I +RD K+ NIL+         K G C    L
Sbjct: 108 LR--IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV--------KKNGQCCIADL 157
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY----VMTGHLTS-- 345
               M  Q  N    D G   + P           +GT  Y APE     +      S  
Sbjct: 158 GLAVMHSQSTNQL--DVG---NNPR----------VGTKRYMAPEVLDETIQVDCFDSYK 202
Query: 346 RSDVYSFGVVLLEM 359
           R D+++FG+VL E+
Sbjct: 203 RVDIWAFGLVLWEV 216

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 128/340 (37%), Gaps = 94/340 (27%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
           +   R       +G+G +G V++G W  EN            VAVK  +    +  K W 
Sbjct: 33  RTVARQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 77
Query: 184 AEVNFLGDLVHLNLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
            E   L + V L    ++G+   D        Q  L+  +   GSL ++L   +L     
Sbjct: 78  RETE-LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 136
Query: 237 IRMKIALGAAKGLAFLHEEA----ERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
           +R  I L  A GLA LH E      +P I +RD K+ NIL+         K G C    L
Sbjct: 137 LR--IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK--------KNGQCCIADL 186
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY----VMTGHLTS-- 345
               M  Q  N    D G   + P           +GT  Y APE     +      S  
Sbjct: 187 GLAVMHSQSTNQL--DVG---NNPR----------VGTKRYMAPEVLDETIQVDCFDSYK 231
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI--DPRLEGH- 402
           R D+++FG+VL E+   RR +     NG   +VE  +P       FY ++  DP  E   
Sbjct: 232 RVDIWAFGLVLWEV--ARRMV----SNG---IVEDYKPP------FYDVVPNDPSFEDMR 276
Query: 403 ----------------FSIKGAQKAAQLAAHCLSRDPKAR 426
                           FS       A+L   C  ++P AR
Sbjct: 277 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 55/243 (22%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGY-----CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
             L  + H N++ L+        +E+   + +   +    L N    +S  L       +
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKSQKLTDDHVQFL 130
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                +GL ++H      +I+RD K SN+ ++                         +D 
Sbjct: 131 IYQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDS 162
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML 360
             K+ DFGL +   +    +V+TR      Y APE ++   H     D++S G ++ E+L
Sbjct: 163 ELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 361 TGR 363
           TGR
Sbjct: 218 TGR 220

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
           L EV  L  L H N++KL  +  +     LV E    G L + +  R     +  ++ MK
Sbjct: 52  LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
             L    G  +LH+     +++RD K  N+LL++                        +D
Sbjct: 112 QVLS---GTTYLHK---HNIVHRDLKPENLLLESKS----------------------RD 143
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFGL+     G K       +GT  Y APE V+      + DV+S GV+L  +L
Sbjct: 144 ALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILL 199
Query: 361 TG 362
            G
Sbjct: 200 CG 201

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ D+GLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
           L EV  L  L H N++KL  +  +     LV E    G L + +  R     +  ++ +K
Sbjct: 84  LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
             L    G+ +LH+     +++RD K  N+LL++                        +D
Sbjct: 144 QVLS---GVTYLHK---HNIVHRDLKPENLLLESKE----------------------KD 175
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFGL+      ++  +  R +GT  Y APE V+      + DV+S GV+L  +L
Sbjct: 176 ALIKIVDFGLS--AVFENQKKMKER-LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILL 231
Query: 361 TG--------RRSMDKNRPNGEHNLV--EWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
            G         + + +    G++     EW     G +    +++    +   S + A +
Sbjct: 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291
Query: 411 AAQLAAHCLSRDPKAR-PLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTR 467
              +   C  ++     P ++  +E ++   N + +A ++  +    A ++ S   T+
Sbjct: 292 HPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLY---MASKLTSQEETK 346

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +     V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 98/242 (40%), Gaps = 60/242 (24%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G +G V++G W  EN            VAVK  +    +  K W  E   L + V L
Sbjct: 16  VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETE-LYNTVML 59
Query: 196 NLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
               ++G+   D        Q  L+  +   GSL ++L   +L     +R  I L  A G
Sbjct: 60  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASG 117
Query: 249 LAFLHEEA----ERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           LA LH E      +P I +RD K+ NIL+         K G C    L    M  Q  N 
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVK--------KNGQCCIADLGLAVMHSQSTNQ 169
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY----VMTGHLTS--RSDVYSFGVVLL 357
              D G   + P           +GT  Y APE     +      S  R D+++FG+VL 
Sbjct: 170 L--DVG---NNPR----------VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 358 EM 359
           E+
Sbjct: 215 EV 216

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
           +FR   +LG G F  V     E+  T  +       VA+K +  + L+G +  +  E+  
Sbjct: 21  DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           L  + H N+V L           L+ + +  G L + +  +          ++       
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH+     +++RD K  N+L                YY L       +D    +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           GL+K     D   V +   GT GY APE +     +   D +S GV+   +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 159 KPGTGLTVAVKTLNHDGL-QGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VY 214
           +   G  +  K L++  + +  K+ L +EVN L +L H N+V+     I+     L  V 
Sbjct: 27  RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 215 EFMPRGSLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
           E+   G L + +      R+ L   + +R+   L  A        +    V++RD K +N
Sbjct: 87  EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
           + LD  +                         N KL DFGLA+     +    +   +GT
Sbjct: 147 VFLDGKQ-------------------------NVKLGDFGLARILNHDED--FAKEFVGT 179
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
             Y +PE +       +SD++S G +L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
           +FR   +LG G F  V     E+  T  +       VA+K +  + L+G +  +  E+  
Sbjct: 21  DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           L  + H N+V L           L+ + +  G L + +  +          ++       
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH+     +++RD K  N+L                YY L       +D    +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           GL+K     D   V +   GT GY APE +     +   D +S GV+   +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 52/249 (20%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R FT +D ++     RP   LG+G FG V+            +  +   VA+K L    +
Sbjct: 18  RHFTIDDFEIG----RP---LGKGKFGNVYLAR---------EKKSHFIVALKVLFKSQI 61
Query: 177 QGH---KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
           +      +   E+     L H N+++L  Y  +  +  L+ E+ PRG L   L ++S   
Sbjct: 62  EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTF 120
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                  I    A  L + H    + VI+RD K  N                        
Sbjct: 121 DEQRTATIMEELADALMYCHG---KKVIHRDIKPEN------------------------ 153
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
             +L      K++DFG +   P   +      + GT  Y  PE +       + D++  G
Sbjct: 154 -LLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYLPPEMIEGRMHNEKVDLWCIG 208
Query: 354 VVLLEMLTG 362
           V+  E+L G
Sbjct: 209 VLCYELLVG 217

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
           +FR   +LG G F  V     E+  T  +       VA+K +  + L+G +  +  E+  
Sbjct: 21  DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           L  + H N+V L           L+ + +  G L + +  +          ++       
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH+     +++RD K  N+L                YY L       +D    +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           GL+K     D   V +   GT GY APE +     +   D +S GV+   +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
           +FR   +LG G F  V     E+  T  +       VA+K +    L+G +  +  E+  
Sbjct: 21  DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKKALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           L  + H N+V L           L+ + +  G L + +  +          ++       
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH+     +++RD K  N+L                YY L       +D    +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           GL+K     D   V +   GT GY APE +     +   D +S GV+   +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 54/242 (22%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNF 188
           ++  S +G G +G V   +        VK  +GL +AVK L+     +   K    E+  
Sbjct: 53  YQTLSPVGSGAYGSVCSSY-------DVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 189 LGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L  + H N++ L+          E +   LV   M  G+  N++ +        ++  I 
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI- 160
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               +GL ++H      +I+RD K SN+ ++                         +D  
Sbjct: 161 YQILRGLKYIHSAD---IIHRDLKPSNLAVN-------------------------EDCE 192
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT 361
            K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LT
Sbjct: 193 LKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
Query: 362 GR 363
           GR
Sbjct: 248 GR 249

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 101/273 (36%), Gaps = 68/273 (24%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
           N+  + L+G G +G V+  + ++N            VA+K +N   + L   K  L E+ 
Sbjct: 29  NYEIKHLIGRGSYGYVYLAY-DKNANK--------NVAIKKVNRMFEDLIDCKRILREIT 79
Query: 188 FLGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            L  L    +++L    I +D      L +   +    L+  LF+  + L       I  
Sbjct: 80  ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQHVKTILY 138
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
               G  F+HE     +I+RD K +N LL+                         QD + 
Sbjct: 139 NLLLGEKFIHESG---IIHRDLKPANCLLN-------------------------QDCSV 170
Query: 304 KLSDFGLAKDGPEGDKTHVS-----------------------TRVMGTYGYAAPEYVMT 340
           K+ DFGLA+        H+                        T  + T  Y APE ++ 
Sbjct: 171 KICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 230
Query: 341 G-HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
             + T+  D++S G +  E+L   +S   N  N
Sbjct: 231 QENYTNSIDIWSTGCIFAELLNMMKSHINNPTN 263

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
           N ++  D  A L DFG+A    +   T +   V GT  Y APE     H T R+D+Y+  
Sbjct: 164 NILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALT 222
Query: 354 VVLLEMLTG 362
            VL E LTG
Sbjct: 223 CVLYECLTG 231

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TG  VAVK L+     +   K    E+
Sbjct: 21  QNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ + +      ++  
Sbjct: 69  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFL 126
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 127 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 157
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 360 LTGR 363
           LTGR
Sbjct: 213 LTGR 216

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLVH 194
           +GEG +G VFK    +         TG  VA+K    + D     K  L E+  L  L H
Sbjct: 11  IGEGSYGVVFKCRNRD---------TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            NLV L+       +  LV+E+     L + L R    +P  +   I     + + F H+
Sbjct: 62  PNLVNLLEVFRRKRRLHLVFEYCDHTVL-HELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK-- 312
                 I+RD K  NIL+                               KL DFG A+  
Sbjct: 121 HN---CIHRDVKPENILITKHSV-------------------------IKLCDFGFARLL 152
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
            GP    +      + T  Y +PE ++         DV++ G V  E+L+G
Sbjct: 153 TGP----SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TG  VAVK L+     +   K    E+
Sbjct: 31  QNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 79  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
           LTGR
Sbjct: 223 LTGR 226

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 163
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 164 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 90/237 (37%), Gaps = 44/237 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H 194
           LLGEG +  V            V    G   AVK +             EV  L     +
Sbjct: 20  LLGEGAYAKV---------QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
            N+++LI +  EDD R  LV+E +  GS+  H+ ++          ++    A  L FLH
Sbjct: 71  KNILELIEF-FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLH 128
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY---YGLFFNNMLFQDYNAKLSDFGL 310
            +    + +RD K  NIL ++   E       C +    G+  NN        +L     
Sbjct: 129 TKG---IAHRDLKPENILCES--PEKVSPVKICDFDLGSGMKLNNSCTPITTPEL----- 178
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEY--VMTGHLT---SRSDVYSFGVVLLEMLTG 362
                        T   G+  Y APE   V T   T    R D++S GVVL  ML+G
Sbjct: 179 -------------TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 88/235 (37%), Gaps = 52/235 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G F  V+KG ++   T  V       +  + L     Q  KE   E   L  L H N
Sbjct: 34  IGRGSFKTVYKG-LDTETTVEV---AWCELQDRKLTKSERQRFKE---EAEXLKGLQHPN 86
Query: 197 LVKLIGY---------CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
           +V+             CI     +LV E    G+L+ +L R  +     +R        K
Sbjct: 87  IVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLR-SWCRQILK 140
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL FLH     P+I+RD K  NI +        G  G                 + K+ D
Sbjct: 141 GLQFLHTRTP-PIIHRDLKCDNIFIT-------GPTG-----------------SVKIGD 175
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            GLA       +   +  V+GT  + APE     +  S  DVY+FG   LE  T 
Sbjct: 176 LGLAT----LKRASFAKAVIGTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXATS 225

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 186
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 187 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 187
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 188 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 177
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 178 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 168 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 45/231 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLV 193
           +G G +G V          + +   +G  VA+K L+    Q     K    E+  L  + 
Sbjct: 32  VGSGAYGSV---------CSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ 81
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
           H N++ L+              F P  SL N  +   L +P+   M+  L    GL F  
Sbjct: 82  HENVIGLLDV------------FTPASSLRN-FYDFYLVMPF---MQTDLQKIMGLKF-S 124
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
           EE  + ++Y+  K    +  A       K G         N  + +D   K+ DFGLA+ 
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPG---------NLAVNEDCELKILDFGLARH 175
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
                  +V TR      Y APE +++  H     D++S G ++ EMLTG+
Sbjct: 176 ADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 50/250 (20%)
Query: 130 NFRPESLLGEGGFGCVFKG---------WIEENGTAPVKPGTGLTVA--VKTLNHD-GLQ 177
           +F   ++LG+G FG V K           I++      K  T L+    + +LNH   ++
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRRSL 231
            +  WL   NF+     +     +    E  +   +Y+ +   +L         LFR+ L
Sbjct: 67  YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
                          + L+++H +    +I+R+ K  NI +D  R    G FG       
Sbjct: 127 ---------------EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFG------- 161
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVY 350
                L ++ +  L    L      G   ++ T  +GT  Y A E +  TGH   + D Y
Sbjct: 162 -----LAKNVHRSLDILKLDSQNLPGSSDNL-TSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 351 SFGVVLLEML 360
           S G++  E +
Sbjct: 216 SLGIIFFEXI 225

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KGL ++H      V++RD K  N+ ++                         +D   K+ 
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVN-------------------------EDCELKIL 186
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+        +V TR      Y APE +++  H     D++S G ++ EMLTG+
Sbjct: 187 DFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 111/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 15  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 196 N--------LVKLIGYCIEDDQRLLVYEFMP-----------RGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E M            RG+L+  L R      W 
Sbjct: 66  KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 123 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 153
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 154 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           G++L +M+ G    + +         E  R  +  R+R                 + +  
Sbjct: 201 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SSECQ 236
Query: 413 QLAAHCLSRDPKARPLMSEV 432
            L   CL+  P  RP   E+
Sbjct: 237 HLIRWCLALRPSDRPTFEEI 256

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 57/262 (21%)
Query: 194 HLNLVKLIGYCIED----DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAA 246
           H N+++L+ YC+ +     +  L+  F  RG+L N + R   +   L     + + LG  
Sbjct: 85  HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILL----DAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +GL  +H +      +RD K +NILL      V  +       CI+       +  QD+ 
Sbjct: 145 RGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE-YVMTGH--LTSRSDVYSFGVVLLEM 359
           A+                        T  Y APE + +  H  +  R+DV+S G VL  M
Sbjct: 202 AQRC----------------------TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAM 239
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
           + G    D     G+   +                +  +L    S + +    QL    +
Sbjct: 240 MFGEGPYDMVFQKGDSVALA---------------VQNQLSIPQSPRHSSALWQLLNSMM 284
Query: 420 SRDPKAR---PLMSEVVEALKP 438
           + DP  R   PL+   +EAL+P
Sbjct: 285 TVDPHQRPHIPLLLSQLEALQP 306

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ D GLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   ++ 
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVN-------------------------EDCELRIL 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   E    +V+TR      Y APE ++   H     D++S G ++ E+L G+
Sbjct: 166 DFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+  FGLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/327 (20%), Positives = 123/327 (37%), Gaps = 69/327 (21%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
           F  + +  R +     +G GG   VF+   E+     +K      V ++  ++  L  ++
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 181 EWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSI 237
             +A +N L    H + +++L  Y I D     +Y  M  G+++ N   ++   + PW  
Sbjct: 75  NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           R        + +  +H+     +++ D K +N L+                     + ML
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI--------------------VDGML 165
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSR 346
                 KL DFG+A        + V    +GT  Y  PE +               ++ +
Sbjct: 166 ------KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDV+S G +L  M  G+    +                + +  + + +IDP  E  F   
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEFPDI 264
Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVV 433
             +    +   CL RDPK R  + E++
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELL 291

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   ++ 
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVN-------------------------EDSELRIL 173
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   E    +V+TR      Y APE ++   H     D++S G ++ E+L G+
Sbjct: 174 DFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ D GLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 43/241 (17%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
            ++  AT   R    LG G FG V +  +E+  T       G   AVK +  +  +    
Sbjct: 71  EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 115
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
              E+     L    +V L G   E     +  E +  GSL   L +    LP    +  
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY 171
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
              A +GL +LH    R +++ D K  N+LL +    +      C +            +
Sbjct: 172 LGQALEGLEYLHS---RRILHGDVKADNVLLSS----DGSHAALCDF-----------GH 213
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
              L   GL KD   GD       + GT  + APE V+     ++ DV+S   ++L ML 
Sbjct: 214 AVCLQPDGLGKDLLTGD------YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 362 G 362
           G
Sbjct: 268 G 268

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 43/206 (20%)
Query: 166 VAVKTLNH--DGLQGHKEWLAEVNFLGDLVHLNLVKLI-----GYCIEDDQRLLVYEFMP 218
           VAVK L+     L   +    E+  L  L H N++ L+        IED   + +   + 
Sbjct: 56  VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
              L N    +S  L       +     +GL ++H      +I+RD K SN+ ++     
Sbjct: 116 GADLNN--IVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVN----- 165
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
                               +D   ++ DFGLA+   E    +V+TR      Y APE +
Sbjct: 166 --------------------EDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
Query: 339 MTG-HLTSRSDVYSFGVVLLEMLTGR 363
           +   H     D++S G ++ E+L G+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 110/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 16  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 67  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 154
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 155 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           G++L +M+ G    + +         E  R  +  R+R                 + +  
Sbjct: 202 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SSECQ 237
Query: 413 QLAAHCLSRDPKARPLMSEV 432
            L   CL+  P  RP   E+
Sbjct: 238 HLIRWCLALRPSDRPTFEEI 257

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 30  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 81  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 138 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 168
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 169 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 216 GILLYDMVCG 225

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 31  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 82  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 169
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 170 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 217 GILLYDMVCG 226

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 30  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 81  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 138 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 168
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 169 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 216 GILLYDMVCG 225

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 187
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +     V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 188 DFGLARHTDDEMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 58  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 166 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 196
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 197 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 244 GILLYDMVCG 253

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 31  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 82  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 169
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 170 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 217 GILLYDMVCG 226

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 163
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +     V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 164 DFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 31  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 82  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 169
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 170 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 217 GILLYDMVCG 226

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
           R  RPE      +LGEG F  V             +  T    A+K L   H   +    
Sbjct: 4   RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 54
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
           ++  E + +  L H   VKL  +  +DD++L     +   G L  ++ R+      +   
Sbjct: 55  YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 112
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                    L +LH +    +I+RD K  NILL+                         +
Sbjct: 113 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 144
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           D + +++DFG AK      K   +   +GT  Y +PE +        SD+++ G ++ ++
Sbjct: 145 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 204
Query: 360 LTG 362
           + G
Sbjct: 205 VAG 207

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V     +E G             VK    +     K  L  VNF        
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
           LVKL  Y  +D+  L +V E++P G + +HL R    S P       +I L       +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      +IYRD K  N+L+D                         Q    +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
                    V  R   + GT  Y APE +++       D ++ GV++ EM  G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 26/150 (17%)
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHL 343
           N L  D   KL DFG+A        + V    +GT  Y  PE +               +
Sbjct: 141 NFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 200
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
           + +SDV+S G +L  M  G+    +                + +  + + +IDP  E  F
Sbjct: 201 SPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEF 245
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
                +    +   CL RDPK R  + E++
Sbjct: 246 PDIPEKDLQDVLKCCLKRDPKQRISIPELL 275

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 43  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 94  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 229 GILLYDMVCG 238

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +     V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 168 DFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
           +N  P   +G G +G V          A     TGL VAVK L+     +   K    E+
Sbjct: 25  QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             L  + H N++ L+          E +   LV   M  G+  N++ +        ++  
Sbjct: 73  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           I     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
              K+ D GLA+   +    +V+TR      Y APE ++   H     D++S G ++ E+
Sbjct: 162 CELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
           LTGR
Sbjct: 217 LTGR 220

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 63  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 170
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 171 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 201
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 202 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 248
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 249 GILLYDMVCG 258

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           +GL ++H      +I+RD K SN+ ++                         +D   K+ 
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
           DFGLA+   +     V+TR      Y APE ++   H     D++S G ++ E+LTGR
Sbjct: 168 DFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 43  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 94  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 229 GILLYDMVCG 238

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 16  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 67  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 154
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 155 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 202 GILLYDMVCG 211

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/327 (20%), Positives = 122/327 (37%), Gaps = 69/327 (21%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
           F  + +  R +     +G GG   VF+   E+     +K      V ++  ++  L  ++
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 181 EWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSI 237
             +A +N L    H + +++L  Y I D     +Y  M  G+++ N   ++   + PW  
Sbjct: 75  NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
           R        + +  +H+     +++ D K +N L+                     + ML
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI--------------------VDGML 165
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSR 346
                 KL DFG+A          V    +GT  Y  PE +               ++ +
Sbjct: 166 ------KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SDV+S G +L  M  G+    +                + +  + + +IDP  E  F   
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEFPDI 264
Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVV 433
             +    +   CL RDPK R  + E++
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELL 291

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 16  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 67  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 154
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 155 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 202 GILLYDMVCG 211

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
           R  RPE      +LGEG F  V             +  T    A+K L   H   +    
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 53
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
           ++  E + +  L H   VKL  +  +DD++L     +   G L  ++ R+      +   
Sbjct: 54  YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 111
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                    L +LH +    +I+RD K  NILL+                         +
Sbjct: 112 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 143
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           D + +++DFG AK      K   +   +GT  Y +PE +        SD+++ G ++ ++
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203
Query: 360 LTG 362
           + G
Sbjct: 204 VAG 206

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 44  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 95  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 230 GILLYDMVCG 239

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 43  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 94  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 229 GILLYDMVCG 238

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
           +F+   +LGEG F  V             +  T    A+K L   H   +    ++  E 
Sbjct: 33  DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           + +  L H   VKL  +  +DD++L     +   G L  ++ R+      +         
Sbjct: 84  DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              L +LH +    +I+RD K  NILL+                         +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           +DFG AK      K   +   +GT  Y +PE +     +  SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
           R  RPE      +LGEG F  V             +  T    A+K L   H   +    
Sbjct: 5   RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 55
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
           ++  E + +  L H   VKL  +  +DD++L     +   G L  ++ R+      +   
Sbjct: 56  YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 113
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                    L +LH +    +I+RD K  NILL+                         +
Sbjct: 114 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 145
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           D + +++DFG AK      K   +   +GT  Y +PE +        SD+++ G ++ ++
Sbjct: 146 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 205
Query: 360 LTG 362
           + G
Sbjct: 206 VAG 208

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 58  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 166 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 196
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 197 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 244 GILLYDMVCG 253

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 15  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 66  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 123 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 153
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 154 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 201 GILLYDMVCG 210

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V     +E G             VK    +     K  L  VNF        
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
           LVKL  Y  +D+  L +V E++P G + +HL R    S P       +I L       +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      +IYRD K  N+L+D                         Q    +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
                    V  R   + GT  Y APE +++       D ++ GV++ EM  G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 50  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 157
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 158 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 188
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 189 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 236 GILLYDMVCG 245

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 44  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 95  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 230 GILLYDMVCG 239

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V     +E G             VK    +     K  L  VNF        
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
           LVKL  Y  +D+  L +V E++P G + +HL R    S P       +I L       +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      +IYRD K  N+L+D                         Q    +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
                    V  R   + GT  Y APE +++       D ++ GV++ EM  G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 43  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 94  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 229 GILLYDMVCG 238

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 11  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 62  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 119 VLEAVRHCHNXG-----------VLHRDIKDENILIDLNRGE------------------ 149
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 150 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 197 GILLYDMVCG 206

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 44  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 95  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 230 GILLYDMVCG 239

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 44  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 95  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
           G++L +M+ G
Sbjct: 230 GILLYDMVCG 239

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
           R  RPE      +LGEG F  V             +  T    A+K L   H   +    
Sbjct: 2   RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 52
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
           ++  E + +  L H   VKL  +  +DD++L     +   G L  ++ R+      +   
Sbjct: 53  YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 110
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                    L +LH +    +I+RD K  NILL+                         +
Sbjct: 111 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 142
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           D + +++DFG AK      K   +   +GT  Y +PE +        SD+++ G ++ ++
Sbjct: 143 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 202
Query: 360 LTG 362
           + G
Sbjct: 203 VAG 205

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 110/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LLG GGFG V+ G         ++    L VA+K +  D +    E         ++V L
Sbjct: 38  LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
                    +++L+ +    D  +L+ E              RG+L+  L R      W 
Sbjct: 89  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 145
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           +   +      G           V++RD K  NIL+D  R E                  
Sbjct: 146 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 176
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
                  KL DFG   L KD        V T   GT  Y+ PE++       RS  V+S 
Sbjct: 177 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 223
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           G++L +M+ G    + +         E  R  +  R+R                 + +  
Sbjct: 224 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SXECQ 259
Query: 413 QLAAHCLSRDPKARPLMSEV 432
            L   CL+  P  RP   E+
Sbjct: 260 HLIRWCLALRPSDRPTFEEI 279

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	511
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	0.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-179
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-155
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-81
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-60
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-59
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-58
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-58
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-56
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-55
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-53
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-52
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-52
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-51
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-51
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-50
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-50
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-49
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-37
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-37
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-37
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-36
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-35
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-35
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-35
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-34
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-33
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-33
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-33
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-32
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-32
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-32
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-32
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-32
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-32
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-32
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-32
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-31
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-31
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-31
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-31
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-31
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-31
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	7e-31
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-31
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-31
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-31
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-30
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-30
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-30
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-30
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-30
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-30
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-30
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	7e-30
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-30
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-30
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-30
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-29
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-29
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-29
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-29
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-29
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-29
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-29
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-29
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-29
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-29
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	9e-29
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-28
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-28
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-28
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-28
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-28
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-28
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-27
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-27
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-27
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-27
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-27
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-27
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-27
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-27
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-26
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-26
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-26
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-26
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-26
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-25
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-25
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-25
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-25
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-25
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-25
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-25
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-25
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-24
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-23
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-23
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-23
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-23
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-23
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-23
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-22
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-22
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-22
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-22
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-22
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-22
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-21
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-21
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	8e-21
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-20
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-20
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-20
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-20
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-19
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-19
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-19
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-19
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-19
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-19
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-19
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-18
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-18
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-18
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-18
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-18
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-18
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-18
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-18
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-17
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-17
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-17
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-17
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-17
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-17
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-17
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-16
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-16
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-16
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-16
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	7e-16
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-16
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-16
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-15
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-15
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-15
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-15
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-15
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-15
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-15
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-15
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-14
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-14
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-14
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-14
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-14
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-14
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-14
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-14
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-14
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	9e-14
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-13
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-13
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-13
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-13
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-13
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-13
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-12
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-12
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-12
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	7e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-12
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-11
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-11
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-09
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-09
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-08
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-08
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	4e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	7e-08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	7e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	9e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-06
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	8e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-05

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  524 bits (1351), Expect = 0.0
 Identities = 110/346 (31%), Positives = 172/346 (49%), Gaps = 56/346 (16%)

Query: 107 EEELKVAS-RLRKFTFNDLKLATRNFRPE------SLLGEGGFGCVFKGWIEENGTAPVK 159
            + L+V+  R   F+F +LK  T NF         + +GEGGFG V+KG++         
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT------ 55

Query: 160 PGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYE 215
                TVAVK L    +    +  +++  E+  +    H NLV+L+G+  + D   LVY 
Sbjct: 56  -----TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV 110

Query: 216 FMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD 273
           +MP GSL + L     + PL W +R KIA GAA G+ FLHE      I+RD K++NILLD
Sbjct: 111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167

Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
                                      + AK+SDFGLA+   +  +T +++R++GT  Y 
Sbjct: 168 E-------------------------AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYM 202

Query: 334 APEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYR 393
           APE  + G +T +SD+YSFGVVLLE++TG  ++D++R      L++       E +    
Sbjct: 203 APEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIED 259

Query: 394 LIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
            ID ++         +    +A+ CL      RP + +V + L+ +
Sbjct: 260 YIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  505 bits (1304), Expect = e-179
 Identities = 116/357 (32%), Positives = 182/357 (50%), Gaps = 42/357 (11%)

Query: 93  TTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEE 152
           +  +  +NS    L     V     +    DL+ AT NF  + L+G G FG V+KG + +
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62

Query: 153 NGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL 212
                     G  VA+K    +  QG +E+  E+  L    H +LV LIG+C E ++ +L
Sbjct: 63  ----------GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112

Query: 213 VYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
           +Y++M  G+L+ HL+     ++ + W  R++I +GAA+GL +LH      +I+RD K+ N
Sbjct: 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSIN 169

Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
           ILLD                         +++  K++DFG++K G E D+TH+ST V GT
Sbjct: 170 ILLD-------------------------ENFVPKITDFGISKKGTELDQTHLSTVVKGT 204

Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERR 389
            GY  PEY + G LT +SDVYSFGVVL E+L  R ++ ++ P    NL EWA        
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH-NNG 263

Query: 390 RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMA 446
           +  +++DP L      +  +K    A  CL+   + RP M +V+  L+    L++  
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  444 bits (1145), Expect = e-155
 Identities = 119/329 (36%), Positives = 187/329 (56%), Gaps = 43/329 (13%)

Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
           +L++F+  +L++A+ NF  +++LG GGFG V+KG +  +GT          VAVK L  +
Sbjct: 16  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGT---------LVAVKRLKEE 65

Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
             QG + ++  EV  +   VH NL++L G+C+   +RLLVY +M  GS+ + L  R    
Sbjct: 66  RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125

Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            PL W  R +IALG+A+GLA+LH+  +  +I+RD K +NILLD                 
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE---------------- 169

Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                    ++ A + DFGLAK     D THV+T V GT G+ APEY+ TG  + ++DV+
Sbjct: 170 ---------EFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVF 219

Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEH--NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
            +GV+LLE++TG+R+ D  R   +    L++W +  L + ++   L+D  L+G++  +  
Sbjct: 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL-KEKKLEALVDVDLQGNYKDEEV 278

Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALK 437
           ++  Q+A  C    P  RP MSEVV  L+
Sbjct: 279 EQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  254 bits (651), Expect = 4e-81
 Identities = 77/373 (20%), Positives = 129/373 (34%), Gaps = 75/373 (20%)

Query: 96  NAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGT 155
               +  +S ++               +L   +   +   +   G FGCV+K  +     
Sbjct: 2   GHHHHHHSSGVD-----------LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL---- 46

Query: 156 APVKPGTGLTVAVKTLNHDGLQGHKEWLAE--VNFLGDLVHLNLVKLIGYCIEDD----Q 209
                     VAVK      +Q  + W  E  V  L  + H N+++ IG           
Sbjct: 47  -------NEYVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96

Query: 210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER-------PVIY 262
             L+  F  +GSL + L      + W+    IA   A+GLA+LHE+           + +
Sbjct: 97  LWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH 154

Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV 322
           RD K+ N+LL                           +  A ++DFGLA     G     
Sbjct: 155 RDIKSKNVLLKN-------------------------NLTACIADFGLALKFEAGKSAGD 189

Query: 323 STRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 377
           +   +GT  Y APE +            R D+Y+ G+VL E+ +   + D          
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249

Query: 378 VE--WARPHLGERRRF--YRLIDPRLEGHF-SIKGAQKAAQLAAHCLSRDPKARPLMSEV 432
            E     P L + +    ++   P L  ++    G     +    C   D +AR     V
Sbjct: 250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309

Query: 433 VEALKPLPNLKDM 445
            E +  +  L ++
Sbjct: 310 GERITQMQRLTNI 322

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  200 bits (510), Expect = 3e-60
 Identities = 69/357 (19%), Positives = 121/357 (33%), Gaps = 79/357 (22%)

Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
              ++  L   N +   L+G G +G V+KG   E              VAVK  +     
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER------------PVAVKVFS---FA 47

Query: 178 GHKEWLAEVN--FLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRS 230
             + ++ E N   +  + H N+ + I            + LLV E+ P GSL  +L   +
Sbjct: 48  NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT 107

Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAER------PVIYRDFKTSNILLDAVRAENYGKFG 284
               W    ++A    +GLA+LH E  R       + +RD  + N+L+            
Sbjct: 108 --SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN---------- 155

Query: 285 FCIYYGLFFNNMLFQDYNAKLSDFGLAK------DGPEGDKTHVSTRVMGTYGYAAPEYV 338
                          D    +SDFGL+           G++ + +   +GT  Y APE +
Sbjct: 156 ---------------DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200

Query: 339 M-------TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL----VEWARPHLGE 387
                         + D+Y+ G++  E+      +       E+ +         P   +
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFED 260

Query: 388 RRRF-----YRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
            +        R   P      S+   +   +    C  +D +AR       E +  L
Sbjct: 261 MQVLVSREKQRPKFPEAWKENSL-AVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  196 bits (500), Expect = 3e-59
 Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 77/333 (23%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH- 179
            N+++        E  +G+GGFG V KG + ++ +          VA+K+L     +G  
Sbjct: 18  DNEIEY-------EKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGET 61

Query: 180 ------KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
                 +E+  EV  + +L H N+VKL G         +V EF+P G L + L  ++ P+
Sbjct: 62  EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPI 119

Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
            WS+++++ L  A G+ ++  +   P+++RD ++ NI L                     
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQ-------------------- 158

Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVY 350
           +        AK++DFGL++        H  + ++G + + APE  +       T ++D Y
Sbjct: 159 SLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTY 212

Query: 351 SFGVVLLEMLTGRRSMDKNRP----NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
           SF ++L  +LTG        P    +             G R        PRL       
Sbjct: 213 SFAMILYTILTGE------GPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL------- 259

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
                  +   C S DPK RP  S +V+ L  L
Sbjct: 260 -----RNVIELCWSGDPKKRPHFSYIVKELSEL 287

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  192 bits (491), Expect = 5e-58
 Identities = 86/326 (26%), Positives = 131/326 (40%), Gaps = 67/326 (20%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           F +L L          +G GGFG V++  W    G           VAVK   HD  +  
Sbjct: 6   FAELTLEEI-------IGIGGFGKVYRAFW---IGD---------EVAVKAARHDPDEDI 46

Query: 180 ----KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
               +    E      L H N++ L G C+++    LV EF   G L   L  +   +P 
Sbjct: 47  SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPP 104

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
            I +  A+  A+G+ +LH+EA  P+I+RD K+SNIL+                      N
Sbjct: 105 DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ-----------------KVEN 147

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
               +   K++DFGLA+   E  +T   +   G Y + APE +     +  SDV+S+GV+
Sbjct: 148 GDLSNKILKITDFGLAR---EWHRTTKMSAA-GAYAWMAPEVIRASMFSKGSDVWSYGVL 203

Query: 356 LLEMLTGRRSMDKNRP-NGEHNL-VEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           L E+LTG        P  G   L V +                               A+
Sbjct: 204 LWELLTGE------VPFRGIDGLAVAYGVAMNKLALPIPSTCPEPF------------AK 245

Query: 414 LAAHCLSRDPKARPLMSEVVEALKPL 439
           L   C + DP +RP  + +++ L  +
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  194 bits (494), Expect = 5e-58
 Identities = 77/325 (23%), Positives = 124/325 (38%), Gaps = 76/325 (23%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           + ++++          +G G FG V K  W                VA+K +  +  +  
Sbjct: 7   YKEIEVEEV-------VGRGAFGVVCKAKW------------RAKDVAIKQIESESER-- 45

Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN--HLFRRSLPLPWSI 237
           K ++ E+  L  + H N+VKL G C+      LV E+   GSL N  H          + 
Sbjct: 46  KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAH 103

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            M   L  ++G+A+LH    + +I+RD K  N+LL A                       
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA----------------------- 140

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
                 K+ DFG A      D     T   G+  + APE     + + + DV+S+G++L 
Sbjct: 141 -GGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194

Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARP---HLGERRRFYRLIDPRLEGHFSIKGAQKAAQL 414
           E++T R      +P  E     +      H G R    + +   +              L
Sbjct: 195 EVITRR------KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI------------ESL 236

Query: 415 AAHCLSRDPKARPLMSEVVEALKPL 439
              C S+DP  RP M E+V+ +  L
Sbjct: 237 MTRCWSKDPSQRPSMEEIVKIMTHL 261

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  189 bits (483), Expect = 2e-56
 Identities = 82/326 (25%), Positives = 135/326 (41%), Gaps = 72/326 (22%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           + DL +  +       +G G FG V +  W   +G+          VAVK L        
Sbjct: 36  WCDLNIKEK-------IGAGSFGTVHRAEW---HGS---------DVAVKILMEQDFHAE 76

Query: 180 --KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--LPLPW 235
              E+L EV  +  L H N+V  +G   +     +V E++ RGSL   L +      L  
Sbjct: 77  RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE 136

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
             R+ +A   AKG+ +LH     P+++R+ K+ N+L+D                      
Sbjct: 137 RRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVD---------------------- 173

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
              + Y  K+ DFGL++       +  S    GT  + APE +       +SDVYSFGV+
Sbjct: 174 ---KKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVE--WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           L E+ T +      +P G  N  +   A     +R    R ++P++            A 
Sbjct: 229 LWELATLQ------QPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQV------------AA 270

Query: 414 LAAHCLSRDPKARPLMSEVVEALKPL 439
           +   C + +P  RP  + +++ L+PL
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLRPL 296

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  186 bits (475), Expect = 3e-55
 Identities = 73/334 (21%), Positives = 120/334 (35%), Gaps = 81/334 (24%)

Query: 129 RNFRPESL-----LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           R FRP  L     LG+G FG   K               TG  + +K L     +  + +
Sbjct: 5   RIFRPSDLIHGEVLGKGCFGQAIKVTHR----------ETGEVMVMKELIRFDEETQRTF 54

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L EV  +  L H N++K IG   +D +   + E++  G+L   +       PWS R+  A
Sbjct: 55  LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA 114

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
              A G+A+LH      +I+RD  + N L+                          ++ N
Sbjct: 115 KDIASGMAYLH---SMNIIHRDLNSHNCLVR-------------------------ENKN 146

Query: 303 AKLSDFGLAK------------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
             ++DFGLA+               +         V+G   + APE +       + DV+
Sbjct: 147 VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVF 206

Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRL-----IDPRLEGHFSI 405
           SFG+VL E++    +     P+     +++        R F          P        
Sbjct: 207 SFGIVLCEIIGRVNA----DPDYLPRTMDFGLNV----RGFLDRYCPPNCPPSF------ 252

Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
                   +   C   DP+ RP   ++   L+ L
Sbjct: 253 ------FPITVRCCDLDPEKRPSFVKLEHWLETL 280

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  182 bits (463), Expect = 2e-53
 Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 94/376 (25%)

Query: 98  ESNSSTSKLEEELKVASRLRKFT------FNDLKLATRNFRPESLLGEGGFGCVFKG-WI 150
           E N S        + AS+   F       F  L++          +G+G FG V+ G W 
Sbjct: 3   EMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGEL-------IGKGRFGQVYHGRW- 54

Query: 151 EENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDD 208
             +G           VA++ ++ +       K +  EV       H N+V  +G C+   
Sbjct: 55  --HGE----------VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102

Query: 209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS 268
              ++       +L + +    + L  +   +IA    KG+ +LH    + ++++D K+ 
Sbjct: 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSK 159

Query: 269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK---DGPEGDKTHVSTR 325
           N+  D                          +    ++DFGL         G +      
Sbjct: 160 NVFYD--------------------------NGKVVITDFGLFSISGVLQAGRREDKLRI 193

Query: 326 VMGTYGYAAPEYVMTG---------HLTSRSDVYSFGVVLLEMLTGR---RSMDKNRPNG 373
             G   + APE +              +  SDV++ G +  E+       ++        
Sbjct: 194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--- 250

Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
               + W            +    ++     I        +   C + + + RP  ++++
Sbjct: 251 ----IIWQ------MGTGMKPNLSQIGMGKEIS------DILLFCWAFEQEERPTFTKLM 294

Query: 434 EALKPLPNLKDMASSS 449
           + L+ LP  K     S
Sbjct: 295 DMLEKLP--KRNRRLS 308

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  177 bits (452), Expect = 3e-52
 Identities = 67/337 (19%), Positives = 116/337 (34%), Gaps = 95/337 (28%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
           F  L   T+       L E   G ++KG W    G           + VK L        
Sbjct: 9   FKQLNFLTK-------LNENHSGELWKGRW---QGN---------DIVVKVLKVRDWSTR 49

Query: 180 --KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLFR-RSLPLP 234
             +++  E   L    H N++ ++G C          +  +MP GSL N L    +  + 
Sbjct: 50  KSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD 109

Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
            S  +K AL  A+G+AFLH   E  +      + ++++D                     
Sbjct: 110 QSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMID--------------------- 147

Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVY 350
               +D  A++S   +         +  S   M    + APE  +           +D++
Sbjct: 148 ----EDMTARISMADVKF-------SFQSPGRMYAPAWVAPE-ALQKKPEDTNRRSADMW 195

Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA--------RPHLGERRRFYRLIDPRLEGH 402
           SF V+L E++T         P  + + +E          RP +         I P +   
Sbjct: 196 SFAVLLWELVTRE------VPFADLSNMEIGMKVALEGLRPTIPPG------ISPHV--- 240

Query: 403 FSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
                    ++L   C++ DP  RP    +V  L+ +
Sbjct: 241 ---------SKLMKICMNEDPAKRPKFDMIVPILEKM 268

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  177 bits (450), Expect = 8e-52
 Identities = 75/326 (23%), Positives = 128/326 (39%), Gaps = 67/326 (20%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
              + +  R       +G G FG V+KG W   +G           VAVK LN       
Sbjct: 23  DGQITVGQR-------IGSGSFGTVYKGKW---HGD----------VAVKMLNVTAPTPQ 62

Query: 180 --KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
             + +  EV  L    H+N++  +GY     Q  +V ++    SL +HL           
Sbjct: 63  QLQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKK 121

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            + IA   A+G+ +LH    + +I+RD K++NI L                         
Sbjct: 122 LIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLH------------------------ 154

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE---YVMTGHLTSRSDVYSFGV 354
            +D   K+ DFGLA +      +H   ++ G+  + APE      +   + +SDVY+FG+
Sbjct: 155 -EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213

Query: 355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL 414
           VL E++TG+       P    N  +     +G           ++  +      ++  +L
Sbjct: 214 VLYELMTGQ------LPYSNINNRDQIIEMVGRGSL--SPDLSKVRSNCP----KRMKRL 261

Query: 415 AAHCLSRDPKARPLMSEVVEALKPLP 440
            A CL +    RP    ++  ++ L 
Sbjct: 262 MAECLKKKRDERPSFPRILAEIEELA 287

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  175 bits (445), Expect = 1e-50
 Identities = 68/338 (20%), Positives = 120/338 (35%), Gaps = 70/338 (20%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL--AEVNFLG 190
              +G+G +G V+ G W  E             VAVK            W    E+    
Sbjct: 42  VKQIGKGRYGEVWMGKWRGE------------KVAVKVFFT---TEEASWFRETEIYQTV 86

Query: 191 DLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            + H N++  I   I+      Q  L+ ++   GSL ++L  +S  L     +K+A  + 
Sbjct: 87  LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSV 144

Query: 247 KGLAFLHEEAER-----PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            GL  LH E         + +RD K+ NIL+                          ++ 
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK-------------------------KNG 179

Query: 302 NAKLSDFGLA--KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-------TSRSDVYSF 352
              ++D GLA        +        +GT  Y  PE V+   L          +D+YSF
Sbjct: 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE-VLDESLNRNHFQSYIMADMYSF 238

Query: 353 GVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPHLGERRRF--YRLIDPRLEGHFSIKGA 408
           G++L E+   R          +  ++ +  + P   + R     + + P     +S    
Sbjct: 239 GLILWEVAR-RCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDEC 297

Query: 409 QKA-AQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDM 445
            +   +L   C + +P +R     V + L  +   +D+
Sbjct: 298 LRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  174 bits (442), Expect = 1e-50
 Identities = 71/336 (21%), Positives = 114/336 (33%), Gaps = 78/336 (23%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE--VNFLG 190
              +G+G +G V++G W    G           VAVK  +    +  K W  E  +    
Sbjct: 13  LECVGKGRYGEVWRGSW---QGE---------NVAVKIFSS---RDEKSWFRETELYNTV 57

Query: 191 DLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            L H N++  I   +       Q  L+  +   GSL ++L  +   L     ++I L  A
Sbjct: 58  MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIA 115

Query: 247 KGLAFLHEEAER-----PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            GLA LH E         + +RD K+ NIL+                           + 
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-------------------------NG 150

Query: 302 NAKLSDFGLA--KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-------TSRSDVYSF 352
              ++D GLA             +   +GT  Y APE V+   +         R D+++F
Sbjct: 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAF 209

Query: 353 GVVLLEMLTGRRSMDKNRP--------NGEHNLVEWARPHLGERRRFYRL-IDPRLEGHF 403
           G+VL E+     S                     E  R  +   ++  R  I  R     
Sbjct: 210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ--RPNIPNRWFSD- 266

Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
                   A+L   C  ++P AR     + + L  +
Sbjct: 267 --PTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  173 bits (439), Expect = 1e-49
 Identities = 73/342 (21%), Positives = 124/342 (36%), Gaps = 78/342 (22%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE--VNFLG 190
           +  +G+G FG V++G W  E             VAVK  +    +  + W  E  +    
Sbjct: 47  QESIGKGRFGEVWRGKWRGE------------EVAVKIFS---SREERSWFREAEIYQTV 91

Query: 191 DLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            L H N++  I    +D+    Q  LV ++   GSL ++L      +     +K+AL  A
Sbjct: 92  MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTA 149

Query: 247 KGLAFLHEEAER-----PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            GLA LH E         + +RD K+ NIL+                          ++ 
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-------------------------KNG 184

Query: 302 NAKLSDFGLA--KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-------TSRSDVYSF 352
              ++D GLA   D             +GT  Y APE V+   +         R+D+Y+ 
Sbjct: 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAM 243

Query: 353 GVVLLEMLTGRRSMDKNRP--------NGEHNLVEWARPHLGERRRFYRL-IDPRLEGHF 403
           G+V  E+         +                VE  R  + E++   R  I  R +   
Sbjct: 244 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL--RPNIPNRWQSCE 301

Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDM 445
           +++     A++   C   +  AR     + + L  L   + +
Sbjct: 302 ALR---VMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  140 bits (356), Expect = 2e-37
 Identities = 71/305 (23%), Positives = 113/305 (37%), Gaps = 56/305 (18%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           +G G FG VF G +  + T          VAVK+           ++L E   L    H 
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           N+V+LIG C +     +V E +  G     L      L     +++   AA G+ +L   
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE-- 230

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
             +  I+RD    N L+                          +    K+SDFG++++  
Sbjct: 231 -SKCCIHRDLAARNCLVT-------------------------EKNVLKISDFGMSREEA 264

Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
           +G              + APE +  G  +S SDV+SFG++L E  +   S   N  N + 
Sbjct: 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324

Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
              VE          +  RL  P  E            +L   C + +P  RP  S + +
Sbjct: 325 REFVE----------KGGRL--PCPELC-----PDAVFRLMEQCWAYEPGQRPSFSTIYQ 367

Query: 435 ALKPL 439
            L+ +
Sbjct: 368 ELQSI 372

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  139 bits (351), Expect = 3e-37
 Identities = 88/327 (26%), Positives = 122/327 (37%), Gaps = 69/327 (21%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVN 187
           R  +    LGEG FG V     +     P   GTG  VAVK L  D G Q    W  E++
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEID 85

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
            L  L H +++K  G C +       LV E++P GSL ++L R S+ L   +    A   
Sbjct: 86  ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--AQQI 143

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            +G+A+LH    +  I+RD    N+LLD                          D   K+
Sbjct: 144 CEGMAYLHA---QHYIHRDLAARNVLLD-------------------------NDRLVKI 175

Query: 306 SDFGLAKDGPEGDKTHVST-------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            DFGLAK  PEG + +                   APE +        SDV+SFGV L E
Sbjct: 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWY------APECLKEYKFYYASDVWSFGVTLYE 229

Query: 359 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPR---LEGHFSIKGAQK 410
           +LT    S        E   +   +  +           RL  P     E +        
Sbjct: 230 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVY-------- 281

Query: 411 AAQLAAHCLSRDPKARPLMSEVVEALK 437
              L  +C   +   RP    ++  LK
Sbjct: 282 --HLMKNCWETEASFRPTFENLIPILK 306

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  136 bits (345), Expect = 9e-37
 Identities = 54/233 (23%), Positives = 88/233 (37%), Gaps = 36/233 (15%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG+G F  +FKG                  V +K L+       + +    + +  L H 
Sbjct: 16  LGQGTFTKIFKGVR---REVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFLH 253
           +LV   G C+  D+ +LV EF+  GSL+ +L   +  + + W + +  A   A  + FL 
Sbjct: 73  HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAAAMHFL- 129

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
              E  +I+ +    NILL        G   F                  KLSD G++  
Sbjct: 130 --EENTLIHGNVCAKNILLIREEDRKTGNPPFI-----------------KLSDPGISIT 170

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT-GRR 364
               D        +       PE +    +L   +D +SFG  L E+ + G +
Sbjct: 171 VLPKDILQERIPWV------PPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  135 bits (341), Expect = 8e-36
 Identities = 82/331 (24%), Positives = 121/331 (36%), Gaps = 72/331 (21%)

Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
           R+ +  S LG+G FG V    +       P+   TG  VAVK L H G    +++  E+ 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYD------PLGDNTGALVAVKQLQHSGPDQQRDFQREIQ 76

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
            L  L    +VK  G      ++   LV E++P G L + L R    L  S  +  +   
Sbjct: 77  ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI 136

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KG+ +L     R  ++RD    NIL++                          + + K+
Sbjct: 137 CKGMEYLG---SRRCVHRDLAARNILVE-------------------------SEAHVKI 168

Query: 306 SDFGLAKDGPEGDKTHVST-------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           +DFGLAK  P     +V                  APE +     + +SDV+SFGVVL E
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWY------APESLSDNIFSRQSDVWSFGVVLYE 222

Query: 359 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEG-----HFSIKGA 408
           + T   +S   +         E   P L           RL  P         H      
Sbjct: 223 LFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL--PAPPACPAEVH------ 274

Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
               +L   C +  P+ RP  S +   L  L
Sbjct: 275 ----ELMKLCWAPSPQDRPSFSALGPQLDML 301

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  133 bits (337), Expect = 1e-35
 Identities = 74/330 (22%), Positives = 121/330 (36%), Gaps = 69/330 (20%)

Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
           R+ +    LG+G FG V    +       P++  TG  VAVK L H   +  +++  E+ 
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
            L  L H N+VK  G C    +R   L+ E++P GSL ++L +    +     ++     
Sbjct: 64  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KG+ +L     +  I+RD  T NIL++                          +   K+
Sbjct: 124 CKGMEYLG---TKRYIHRDLATRNILVE-------------------------NENRVKI 155

Query: 306 SDFGLAKDGPEGDKTHVST-------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            DFGL K  P+  +                     APE +     +  SDV+SFGVVL E
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWY------APESLTESKFSVASDVWSFGVVLYE 209

Query: 359 MLTGRRSMDKNRPNGEHNL-----VEWARPHLGER-RRFYRLIDPRL---EGHFSIKGAQ 409
           + T               +      +    HL E  +   RL  P     E +       
Sbjct: 210 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIY------- 262

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
               +   C + +   RP   ++   +  +
Sbjct: 263 ---MIMTECWNNNVNQRPSFRDLALRVDQI 289

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  133 bits (336), Expect = 3e-35
 Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 50/243 (20%)

Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
           R+ +    LG+G FG V    +       P++  TG  VAVK L H   +  +++  E+ 
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 94

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
            L  L H N+VK  G C    +R   L+ E++P GSL ++L +    +     ++     
Sbjct: 95  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KG+ +L     +  I+RD  T NIL++                          +   K+
Sbjct: 155 CKGMEYL---GTKRYIHRDLATRNILVE-------------------------NENRVKI 186

Query: 306 SDFGLAKDGPEGDKTHVST-------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            DFGL K  P+  + +                   APE +     +  SDV+SFGVVL E
Sbjct: 187 GDFGLTKVLPQDKEYYKVKEPGESPIFWY------APESLTESKFSVASDVWSFGVVLYE 240

Query: 359 MLT 361
           + T
Sbjct: 241 LFT 243

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  132 bits (333), Expect = 5e-35
 Identities = 79/329 (24%), Positives = 118/329 (35%), Gaps = 67/329 (20%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVN 187
           R  +    LGEG FG V     +     P    TG  VAVK+L  + G     +   E+ 
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIE 75

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
            L +L H N+VK  G C ED      L+ EF+P GSL+ +L +    +    ++K A+  
Sbjct: 76  ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
            KG+ +L     R  ++RD    N+L++                          ++  K+
Sbjct: 136 CKGMDYL---GSRQYVHRDLAARNVLVE-------------------------SEHQVKI 167

Query: 306 SDFGLAKDGPEGDKTHVST-------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
            DFGL K      + +                   APE +M       SDV+SFGV L E
Sbjct: 168 GDFGLTKAIETDKEYYTVKDDRDSPVFWY------APECLMQSKFYIASDVWSFGVTLHE 221

Query: 359 MLT-GRRSMDKNRPNGEHNLV---EWARPHLGER-RRFYRLIDPR---LEGHFSIKGAQK 410
           +LT             +       +     L    +   RL  P     E +        
Sbjct: 222 LLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY-------- 273

Query: 411 AAQLAAHCLSRDPKARPLMSEVVEALKPL 439
             QL   C    P  R     ++E  + L
Sbjct: 274 --QLMRKCWEFQPSNRTSFQNLIEGFEAL 300

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  131 bits (331), Expect = 2e-34
 Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 45/254 (17%)

Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLN 172
           + LR     + K           LG G FG V+KG WI E     +       VA+K L 
Sbjct: 7   ALLRILKETEFKKIKV-------LGSGAFGTVYKGLWIPEGEKVKIP------VAIKELR 53

Query: 173 HD-GLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL 231
                + +KE L E   +  + + ++ +L+G C+      L+ + MP G L +++     
Sbjct: 54  EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD 112

Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            +     +   +  AKG+ +L    +R +++RD    N+L+                   
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKT----------------- 152

Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
                     + K++DFGLAK     +K + +        + A E ++    T +SDV+S
Sbjct: 153 --------PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 204

Query: 352 FGVVLLEMLT-GRR 364
           +GV + E++T G +
Sbjct: 205 YGVTVWELMTFGSK 218

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  127 bits (321), Expect = 3e-33
 Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 58/243 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVH 194
           LGEG FG V +G          + GT L VAVKT+  D    +  +E+L+E   + D  H
Sbjct: 42  LGEGEFGSVMEG------NLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH 95

Query: 195 LNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHL-FRRSLPLPWSIRMK----IALG 244
            N+++L+G CIE   +     +++  FM  G L  +L + R    P  I ++      + 
Sbjct: 96  PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
            A G+ +L   + R  ++RD    N +L                           D    
Sbjct: 156 IALGMEYL---SNRNFLHRDLAARNCMLR-------------------------DDMTVC 187

Query: 305 LSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           ++DFGL+K    GD  +     ++    +      A E +     TS+SDV++FGV + E
Sbjct: 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWI------AIESLADRVYTSKSDVWAFGVTMWE 241

Query: 359 MLT 361
           + T
Sbjct: 242 IAT 244

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  126 bits (319), Expect = 7e-33
 Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 54/241 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V++G     G    +P T   VA+KT+N    ++   E+L E + + +    
Sbjct: 33  LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAA 246
           ++V+L+G   +    L++ E M RG L+++L              P   S  +++A   A
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            G+A+L        ++RD    N ++                          +D+  K+ 
Sbjct: 149 DGMAYL---NANKFVHRDLAARNCMVA-------------------------EDFTVKIG 180

Query: 307 DFGLAKDGPEGDKTHVSTRV------MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
           DFG+ +D  E D      +       M      +PE +  G  T+ SDV+SFGVVL E+ 
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIA 234

Query: 361 T 361
           T
Sbjct: 235 T 235

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  126 bits (319), Expect = 8e-33
 Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 43/245 (17%)

Query: 128 TRNFRPESL-----LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHK 180
            R F+   L     LG G FG V KG WI E  +  +       V +K +    G Q  +
Sbjct: 7   ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIP------VCIKVIEDKSGRQSFQ 60

Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
                +  +G L H ++V+L+G C       LV +++P GSL +H+ +    L   + + 
Sbjct: 61  AVTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
             +  AKG+ +L    E  +++R+    N+LL                            
Sbjct: 120 WGVQIAKGMYYL---EEHGMVHRNLAARNVLLK-------------------------SP 151

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              +++DFG+A   P  DK  + +       + A E +  G  T +SDV+S+GV + E++
Sbjct: 152 SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211

Query: 361 T-GRR 364
           T G  
Sbjct: 212 TFGAE 216

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  125 bits (316), Expect = 1e-32
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 46/233 (19%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           +G G FGCV+ G      T     G  +  AVK+LN    +    ++L E   + D  H 
Sbjct: 33  IGRGHFGCVYHG------TLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86

Query: 196 NLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AKG+ +L  
Sbjct: 87  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 144

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
            A +  ++RD    N +LD                         + +  K++DFGLA+D 
Sbjct: 145 -ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARDM 178

Query: 315 PEGDKTHVSTRVMG------TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
            + +   V  +              A E + T   T++SDV+SFGV+L E++T
Sbjct: 179 YDKEYYSVHNKTGAKLPVKWM----ALESLQTQKFTTKSDVWSFGVLLWELMT 227

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  125 bits (317), Expect = 1e-32
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 38/231 (16%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVH 194
           LG G FG V+KG WI E     +       VA+K L      + +KE L E   +  + +
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIP------VAIKELREATSPKANKEILDEAYVMASVDN 76

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            ++ +L+G C+      L+ + MP G L +++      +     +   +  AKG+ +L  
Sbjct: 77  PHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL-- 133

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             +R +++RD    N+L+                             + K++DFGLAK  
Sbjct: 134 -EDRRLVHRDLAARNVLVK-------------------------TPQHVKITDFGLAKLL 167

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
              +K + +        + A E ++    T +SDV+S+GV + E++T G +
Sbjct: 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  124 bits (313), Expect = 3e-32
 Identities = 66/305 (21%), Positives = 108/305 (35%), Gaps = 61/305 (20%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEV 186
           R  + +  +G G F  V+KG   E         T + VA   L    L     + +  E 
Sbjct: 26  RFLKFDIEIGRGSFKTVYKGLDTE---------TTVEVAWCELQDRKLTKSERQRFKEEA 76

Query: 187 NFLGDLVHLNLVKLIGYCI---EDDQRLLVY-EFMPRGSLENHLFRRSLPLPWSIRMKIA 242
             L  L H N+V+         +  + +++  E M  G+L+ +L +R   +   +     
Sbjct: 77  EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKVLRSWC 135

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               KGL FLH     P+I+RD K  NI +        G  G                 +
Sbjct: 136 RQILKGLQFLHTR-TPPIIHRDLKCDNIFIT-------GPTG-----------------S 170

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ D GLA       +   +  V+GT  + APE     +     DVY+FG+ +LEM T 
Sbjct: 171 VKIGDLGLATLK----RASFAKAVIGTPEFMAPEMYEEKY-DESVDVYAFGMCMLEMAT- 224

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
                      E+   E        RR    +     +         +  ++   C+ ++
Sbjct: 225 ----------SEYPYSECQNAAQIYRRVTSGVKPASFDKVAI----PEVKEIIEGCIRQN 270

Query: 423 PKARP 427
              R 
Sbjct: 271 KDERY 275

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  125 bits (315), Expect = 3e-32
 Identities = 64/245 (26%), Positives = 91/245 (37%), Gaps = 58/245 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E +   P +      VAVK L        +++  E   L  L H +
Sbjct: 49  LGEGAFGKVFLA--ECHNLLPEQDKM--LVAVKALKEASESARQDFQREAELLTMLQHQH 104

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR--------------MKIA 242
           +V+  G C E    L+V+E+M  G L   L                          + +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
              A G+ +L   A    ++RD  T N L+                          Q   
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QGLV 196

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRV------MGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
            K+ DFG+++D    D   V  R       M       PE ++    T+ SDV+SFGVVL
Sbjct: 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM------PPESILYRKFTTESDVWSFGVVL 250

Query: 357 LEMLT 361
            E+ T
Sbjct: 251 WEIFT 255

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  126 bits (317), Expect = 3e-32
 Identities = 69/300 (23%), Positives = 115/300 (38%), Gaps = 55/300 (18%)

Query: 79  TSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPE---- 134
            S        I   +TS  +   S +   +              +L  A ++        
Sbjct: 30  GSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSL 89

Query: 135 -----SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNF 188
                 ++G G FGCV+ G      T     G  +  AVK+LN    +    ++L E   
Sbjct: 90  IVHFNEVIGRGHFGCVYHG------TLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 143

Query: 189 LGDLVHLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
           + D  H N++ L+G C+  +   L+V  +M  G L N +   +        +   L  AK
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+ FL   A +  ++RD    N +LD                         + +  K++D
Sbjct: 204 GMKFL---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVAD 235

Query: 308 FGLAKDGPEGDKTHVSTRVMG------TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           FGLA+D  + +   V  +              A E + T   T++SDV+SFGV+L E++T
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWM----ALESLQTQKFTTKSDVWSFGVLLWELMT 291

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  123 bits (312), Expect = 4e-32
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 50/235 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG V+ G          +    +  A+K+L+    +Q  + +L E   +  L H 
Sbjct: 29  IGKGHFGVVYHG------EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82

Query: 196 NLVKLIGYCIEDD-QRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFL 252
           N++ LIG  +  +    ++  +M  G L   +   +R+  +   I     L  A+G+ +L
Sbjct: 83  NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF--GLQVARGMEYL 140

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              AE+  ++RD    N +LD                         + +  K++DFGLA+
Sbjct: 141 ---AEQKFVHRDLAARNCMLD-------------------------ESFTVKVADFGLAR 172

Query: 313 DGPEGDKTHVSTRVMG------TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           D  + +   V            T    A E + T   T++SDV+SFGV+L E+LT
Sbjct: 173 DILDREYYSVQQHRHARLPVKWT----ALESLQTYRFTTKSDVWSFGVLLWELLT 223

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  124 bits (313), Expect = 5e-32
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 59/244 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVH 194
           LG+G FG V +           + G+ + VAVK L  D +     +E+L E   + +  H
Sbjct: 31  LGKGEFGSVREA------QLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84

Query: 195 LNLVKLIGYCIEDDQR------LLVYEFMPRGSLENHL-FRRSLPLPWSIRMK----IAL 243
            ++ KL+G  +    +      +++  FM  G L   L   R    P+++ ++      +
Sbjct: 85  PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
             A G+ +L   + R  I+RD    N +L                          +D   
Sbjct: 145 DIACGMEYL---SSRNFIHRDLAARNCMLA-------------------------EDMTV 176

Query: 304 KLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
            ++DFGL++    GD  +   ++++    +      A E +     T  SDV++FGV + 
Sbjct: 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWL------ALESLADNLYTVHSDVWAFGVTMW 230

Query: 358 EMLT 361
           E++T
Sbjct: 231 EIMT 234

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  123 bits (311), Expect = 6e-32
 Identities = 66/246 (26%), Positives = 95/246 (38%), Gaps = 59/246 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LGEG FG VF    E    +P K      VAVK L    L   K++  E   L +L H +
Sbjct: 23  LGEGAFGKVFLA--ECYNLSPTKDKM--LVAVKALKDPTLAARKDFQREAELLTNLQHEH 78

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR---------------MKI 241
           +VK  G C + D  ++V+E+M  G L   L          +                + I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
           A   A G+ +L   A +  ++RD  T N L+                           + 
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVG-------------------------ANL 170

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRV------MGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
             K+ DFG+++D    D   V          M       PE +M    T+ SDV+SFGV+
Sbjct: 171 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM------PPESIMYRKFTTESDVWSFGVI 224

Query: 356 LLEMLT 361
           L E+ T
Sbjct: 225 LWEIFT 230

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  123 bits (311), Expect = 1e-31
 Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 37/234 (15%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
           E ++G G  G V  G +   G   V       VA+K L     +  + ++L+E + +G  
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+++L G        ++V E+M  GSL+  L            + +  G   G+ +L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
              ++   ++RD    N+L+D                          +   K+SDFGL++
Sbjct: 168 ---SDLGYVHRDLAARNVLVD-------------------------SNLVCKVSDFGLSR 199

Query: 313 D-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
               + D  + +T       + APE +     +S SDV+SFGVV+ E+L  G R
Sbjct: 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  122 bits (308), Expect = 1e-31
 Identities = 58/240 (24%), Positives = 96/240 (40%), Gaps = 51/240 (21%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGD 191
           +  LG G FG V +G +        V        A+K L         +E + E   +  
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDV--------AIKVLKQGTEKADTEEMMREAQIMHQ 66

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L +  +V+LIG C + +  +LV E    G L   L  +   +P S   ++    + G+ +
Sbjct: 67  LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKY 125

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L    E+  ++RD    N+LL                            + AK+SDFGL+
Sbjct: 126 L---EEKNFVHRDLAARNVLLV-------------------------NRHYAKISDFGLS 157

Query: 312 KDGPEGDKTHVSTRVMGTYG------YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
           K     D  + +              + APE +     +SRSDV+S+GV + E L+ G++
Sbjct: 158 KALGADDSYYTARS-----AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  126 bits (318), Expect = 1e-31
 Identities = 74/330 (22%), Positives = 135/330 (40%), Gaps = 66/330 (20%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G +G V++G W              LTVAVKTL  D ++  +E+L E   + ++ H 
Sbjct: 228 LGGGQYGEVYEGVW----------KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHP 276

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHE 254
           NLV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L  
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-- 334

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             ++  I+R+    N L+                          +++  K++DFGL++  
Sbjct: 335 -EKKNFIHRNLAARNCLVG-------------------------ENHLVKVADFGLSRL- 367

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
             GD             + APE +     + +SDV++FGV+L E+ T   S        +
Sbjct: 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 427

Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA-QLAAHCLSRDPKARPLMSEV 432
            + L+E          + YR+  P         G  +   +L   C   +P  RP  +E+
Sbjct: 428 VYELLE----------KDYRMERPE--------GCPEKVYELMRACWQWNPSDRPSFAEI 469

Query: 433 VEALKPLPNLKDMASSSYYFQTMQAERIGS 462
            +A + +       SS       +  + G+
Sbjct: 470 HQAFETMFQ----ESSISDEVEKELGKRGT 495

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  122 bits (309), Expect = 1e-31
 Identities = 67/310 (21%), Positives = 95/310 (30%), Gaps = 68/310 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD--GLQGHKEWLAEVN 187
           +F+  S LG G +G VFK               G   AVK       G +     LAEV 
Sbjct: 58  SFQRLSRLGHGSYGEVFKV---------RSKEDGRLYAVKRSMSPFRGPKDRARKLAEVG 108

Query: 188 FLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
               +  H   V+L     E     L  E     SL+ H       LP +          
Sbjct: 109 SHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTL 167

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
             LA LH    + +++ D K +NI L                               KL 
Sbjct: 168 LALAHLHS---QGLVHLDVKPANIFLG-------------------------PRGRCKLG 199

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           DFGL  +        V     G   Y APE +   +  + +DV+S G+ +LE+       
Sbjct: 200 DFGLLVELGTAGAGEV---QEGDPRYMAPELLQGSY-GTAADVFSLGLTILEVACNME-- 253

Query: 367 DKNRPNGEHNLVEWARPHLGERRR--FYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                           PH GE  +      + P      S     +   +    L  DPK
Sbjct: 254 ---------------LPHGGEGWQQLRQGYLPPEFTAGLS----SELRSVLVMMLEPDPK 294

Query: 425 ARPLMSEVVE 434
            R     ++ 
Sbjct: 295 LRATAEALLA 304

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  122 bits (309), Expect = 2e-31
 Identities = 63/233 (27%), Positives = 93/233 (39%), Gaps = 38/233 (16%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V++G  + +G           VAVKTL      Q   ++L E   +    H 
Sbjct: 38  LGHGAFGEVYEG--QVSGMPNDPSPL--QVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-------LPWSIRMKIALGAAKG 248
           N+V+ IG  ++   R ++ E M  G L++ L R + P       L     + +A   A G
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 152

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
             +L    E   I+RD    N LL                              AK+ DF
Sbjct: 153 CQYL---EENHFIHRDIAARNCLL----------------------TCPGPGRVAKIGDF 187

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           G+A+D             M    +  PE  M G  TS++D +SFGV+L E+ +
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  122 bits (309), Expect = 4e-31
 Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 38/233 (16%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V++G  + +G           VAVKTL      Q   ++L E   +    H 
Sbjct: 79  LGHGAFGEVYEG--QVSGMPNDPSPL--QVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL-----PWSIR--MKIALGAAKG 248
           N+V+ IG  ++   R ++ E M  G L++ L R + P        ++   + +A   A G
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 193

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
             +L    E   I+RD    N LL                              AK+ DF
Sbjct: 194 CQYL---EENHFIHRDIAARNCLL----------------------TCPGPGRVAKIGDF 228

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           G+A+D             M    +  PE  M G  TS++D +SFGV+L E+ +
Sbjct: 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  121 bits (306), Expect = 7e-31
 Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 50/238 (21%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVH 194
           +G G FG V+KG     +G   V       VA+KTL      +   ++L E   +G   H
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVP------VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            N+++L G   +    +++ E+M  G+L+  L  +         + +  G A G+ +L  
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL-- 163

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA--- 311
            A    ++RD    NIL++                          +   K+SDFGL+   
Sbjct: 164 -ANMNYVHRDLAARNILVN-------------------------SNLVCKVSDFGLSRVL 197

Query: 312 KDGPEGDKTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
           +D PE   T    ++           APE +     TS SDV+SFG+V+ E++T G R
Sbjct: 198 EDDPEATYTTSGGKIPIRWT------APEAISYRKFTSASDVWSFGIVMWEVMTYGER 249

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  120 bits (303), Expect = 7e-31
 Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 50/238 (21%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDL 192
           LG+G FG V +G W   +G         ++VAVK L  D L   +   +++ EVN +  L
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKT-------VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLA 250
            H NL++L G  +      +V E  P GSL + L   +    L    R   A+  A+G+ 
Sbjct: 79  DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMG 135

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +L     +  I+RD    N+LL                               K+ DFGL
Sbjct: 136 YL---ESKRFIHRDLAARNLLL-------------------------ATRDLVKIGDFGL 167

Query: 311 AKDGPEGDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
            +  P+ D  +V          + + APE + T   +  SD + FGV L EM T G+ 
Sbjct: 168 MRALPQNDDHYVMQE--HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  119 bits (301), Expect = 8e-31
 Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 53/235 (22%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V  G W    G   V        AVK +  +G     E+  E   +  L H 
Sbjct: 16  LGSGQFGVVKLGKW---KGQYDV--------AVKMIK-EGSMSEDEFFQEAQTMMKLSHP 63

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFLH 253
            LVK  G C ++    +V E++  G L N+L    + L     + M       +G+AFL 
Sbjct: 64  KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM--CYDVCEGMAFL- 120

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                  I+RD    N L+D                         +D   K+SDFG+ + 
Sbjct: 121 --ESHQFIHRDLAARNCLVD-------------------------RDLCVKVSDFGMTRY 153

Query: 314 GPEGDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
             +          +GT     ++APE       +S+SDV++FG+++ E+ + G+ 
Sbjct: 154 VLDDQ----YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  120 bits (302), Expect = 9e-31
 Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 61/254 (24%)

Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGL--QG 178
             L L  +       LG G FG V KG +  +     V        AVK L ++      
Sbjct: 16  KLLTLEDK------ELGSGNFGTVKKGYYQMKKVVKTV--------AVKILKNEANDPAL 61

Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSI 237
             E LAE N +  L +  +V++IG C E +  +LV E    G L  +L   R +     I
Sbjct: 62  KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 120

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +      + G+ +L    E   ++RD    N+LL                         
Sbjct: 121 EL--VHQVSMGMKYL---EESNFVHRDLAARNVLLV------------------------ 151

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG------YAAPEYVMTGHLTSRSDVYS 351
              + AK+SDFGL+K     +  + +              + APE +     +S+SDV+S
Sbjct: 152 -TQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVKWYAPECINYYKFSSKSDVWS 205

Query: 352 FGVVLLEMLT-GRR 364
           FGV++ E  + G++
Sbjct: 206 FGVLMWEAFSYGQK 219

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  119 bits (301), Expect = 1e-30
 Identities = 61/270 (22%), Positives = 103/270 (38%), Gaps = 67/270 (24%)

Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
            +L++ + + ++           LGE  FG V+KG     G AP +      VA+KTL  
Sbjct: 1   GKLKEISLSAVRF-------MEELGEDRFGKVYKG--HLFGPAPGEQTQ--AVAIKTLKD 49

Query: 174 D-GLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 232
                  +E+  E      L H N+V L+G   +D    +++ +   G L   L  RS  
Sbjct: 50  KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH 109

Query: 233 LPWSIR---------------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
                                + +    A G+ +L   +   V+++D  T N+L+     
Sbjct: 110 SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVY---- 162

Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYG 331
                                   N K+SD GL ++    D  K   ++ +    M    
Sbjct: 163 ---------------------DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM---- 197

Query: 332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             APE +M G  +  SD++S+GVVL E+ +
Sbjct: 198 --APEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  119 bits (300), Expect = 1e-30
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 57/237 (24%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G G FG V  G W        V        A+KT+  +G    ++++ E   +  L H 
Sbjct: 16  IGSGQFGLVHLGYW---LNKDKV--------AIKTI-REGAMSEEDFIEEAEVMMKLSHP 63

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFLH 253
            LV+L G C+E     LV EFM  G L ++L   R        + M   L   +G+A+L 
Sbjct: 64  KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM--CLDVCEGMAYL- 120

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
              E  VI+RD    N L+                          ++   K+SDFG+ + 
Sbjct: 121 --EEACVIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRF 153

Query: 314 GPEGD-KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
             +    +   T+            +PE       +S+SDV+SFGV++ E+ + G+ 
Sbjct: 154 VLDDQYTSSTGTKFPVKWA------SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  120 bits (302), Expect = 2e-30
 Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 59/248 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LGEG FG V     E  G    KP   +TVAVK L  D   +   + ++E+  +  +  H
Sbjct: 43  LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR---------------M 239
            N++ L+G C +D    ++ E+  +G+L  +L  R  P                     +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                 A+G+ +L   A +  I+RD    N+L+                           
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE------------------------- 192

Query: 300 DYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFG 353
           +   K++DFGLA+D    D  K   + R+    M      APE +     T +SDV+SFG
Sbjct: 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM------APEALFDRVYTHQSDVWSFG 246

Query: 354 VVLLEMLT 361
           V++ E+ T
Sbjct: 247 VLMWEIFT 254

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  118 bits (299), Expect = 2e-30
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 52/237 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           LGEG FG V++G            G  + VAVKT   D    +K ++++E   + +L H 
Sbjct: 20  LGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFLH 253
           ++VKLIG   E+    ++ E  P G L ++L   + SL +   +    +L   K +A+L 
Sbjct: 74  HIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLY--SLQICKAMAYL- 129

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                  ++RD    NIL+                               KL DFGL++ 
Sbjct: 130 --ESINCVHRDIAVRNILVA-------------------------SPECVKLGDFGLSRY 162

Query: 314 GPEGDKTHVST-----RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
             + D    S      + M      +PE +     T+ SDV+ F V + E+L+ G++
Sbjct: 163 IEDEDYYKASVTRLPIKWM------SPESINFRRFTTASDVWMFAVCMWEILSFGKQ 213

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  120 bits (304), Expect = 2e-30
 Identities = 75/330 (22%), Positives = 124/330 (37%), Gaps = 74/330 (22%)

Query: 70  HYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATR 129
           H+                 +    T +AES+SS +     +++ +RL       +     
Sbjct: 7   HHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVS 66

Query: 130 N----------FRPESL-----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
                      F  + L     LGEG FG V     E  G    KP   +TVAVK L  D
Sbjct: 67  EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDD 124

Query: 175 -GLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 232
              +   + ++E+  +  +  H N++ L+G C +D    ++ E+  +G+L  +L  R  P
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184

Query: 233 LPWSIR---------------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
                                +      A+G+ +L   A +  I+RD    N+L+     
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTE--- 238

Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYG 331
                                 +   K++DFGLA+D    D  K   + R+    M    
Sbjct: 239 ----------------------NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM---- 272

Query: 332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             APE +     T +SDV+SFGV++ E+ T
Sbjct: 273 --APEALFDRVYTHQSDVWSFGVLMWEIFT 300

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  120 bits (304), Expect = 2e-30
 Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 49/240 (20%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDL 192
           + ++G G FG V  G ++      +       VA+KTL      +  +++L E + +G  
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQF 103

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
            H N+++L G   +    ++V E+M  GSL++ L +          + +  G A G+ +L
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA- 311
              ++   ++RD    NIL++                          +   K+SDFGL  
Sbjct: 164 ---SDMGYVHRDLAARNILIN-------------------------SNLVCKVSDFGLGR 195

Query: 312 --KDGPEGDKTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
             +D PE   T    ++           +PE +     TS SDV+S+G+VL E+++ G R
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWT------SPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  118 bits (298), Expect = 3e-30
 Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 53/235 (22%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V  G W    G   V        A+K +  +G     E++ E   + +L H 
Sbjct: 32  LGTGQFGVVKYGKW---RGQYDV--------AIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFLH 253
            LV+L G C +     ++ E+M  G L N+L   R        + M       + + +L 
Sbjct: 80  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM--CKDVCEAMEYL- 136

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               +  ++RD    N L++                              K+SDFGL++ 
Sbjct: 137 --ESKQFLHRDLAARNCLVN-------------------------DQGVVKVSDFGLSRY 169

Query: 314 GPEGDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
             + +     T  +G+     ++ PE +M    +S+SD+++FGV++ E+ + G+ 
Sbjct: 170 VLDDE----YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  118 bits (298), Expect = 6e-30
 Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 65/250 (26%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDL 192
           + ++GEG FG V K  I+       K G  +  A+K +        H+++  E+  L  L
Sbjct: 30  QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82

Query: 193 V-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR------------- 238
             H N++ L+G C       L  E+ P G+L + L R+S  L                  
Sbjct: 83  GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSS 141

Query: 239 ---MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +  A   A+G+ +L   +++  I+RD    NIL+                       
Sbjct: 142 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVG---------------------- 176

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYS 351
              ++Y AK++DFGL++      K     R+    M      A E +     T+ SDV+S
Sbjct: 177 ---ENYVAKIADFGLSRGQEVYVKKT-MGRLPVRWM------AIESLNYSVYTTNSDVWS 226

Query: 352 FGVVLLEMLT 361
           +GV+L E+++
Sbjct: 227 YGVLLWEIVS 236

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  118 bits (298), Expect = 7e-30
 Identities = 75/391 (19%), Positives = 123/391 (31%), Gaps = 76/391 (19%)

Query: 73  SKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFR 132
           S S +       A+   + ++ S           + E  + +   K    + +       
Sbjct: 2   SGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMT 61

Query: 133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
            +  +G G FG V +              TG   AVK +    L+  +    E+     L
Sbjct: 62  HQPRVGRGSFGEVHRM---------KDKQTGFQCAVKKVR---LEVFRV--EELVACAGL 107

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
               +V L G   E     +  E +  GSL   L ++   LP    +     A +GL +L
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYL 166

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      +++ D K  N+LL      + G                     A L DFG A 
Sbjct: 167 HTRR---ILHGDVKADNVLLS-----SDGS-------------------RAALCDFGHAL 199

Query: 313 ---DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
                  G        + GT  + APE VM      ++ D++S   ++L ML G      
Sbjct: 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC-DAKVDIWSSCCMMLHMLNGC----- 253

Query: 369 NRPNGEHNLVEWARPHLGERRRFYRL-----IDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
             P        W            ++         +    +       AQ     L ++P
Sbjct: 254 -HP--------WT--QYFRGPLCLKIASEPPPIREIPPSCA----PLTAQAIQEGLRKEP 298

Query: 424 KARP----LMSEVVEALKPLPNLKDMASSSY 450
             R     L  +V +AL+ +  LK      Y
Sbjct: 299 VHRASAMELRRKVGKALQEVGGLKSPWKGEY 329

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  122 bits (307), Expect = 8e-30
 Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 45/237 (18%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGD 191
           +  LG G FG V +G +        V        A+K L         +E + E   +  
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDV--------AIKVLKQGTEKADTEEMMREAQIMHQ 392

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L +  +V+LIG C + +  +LV E    G L   L  +   +P S   ++    + G+ +
Sbjct: 393 LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKY 451

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L    E+  ++R+    N+LL                            + AK+SDFGL+
Sbjct: 452 L---EEKNFVHRNLAARNVLLV-------------------------NRHYAKISDFGLS 483

Query: 312 KDGPEGDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
           K     D  + +           + APE +     +SRSDV+S+GV + E L+ G++
Sbjct: 484 KALGADDSYYTARS--AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  118 bits (298), Expect = 8e-30
 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 68/255 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           +GEG FG VF+      G  P +P T   VAVK L  +       ++  E   + +  + 
Sbjct: 55  IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR----------------- 238
           N+VKL+G C       L++E+M  G L   L   S     S+                  
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 239 ------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
                 + IA   A G+A+L   +ER  ++RD  T N L+                    
Sbjct: 171 LSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVG------------------- 208

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSR 346
                 ++   K++DFGL+++    D  K   +  +    M       PE +     T+ 
Sbjct: 209 ------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWM------PPESIFYNRYTTE 256

Query: 347 SDVYSFGVVLLEMLT 361
           SDV+++GVVL E+ +
Sbjct: 257 SDVWAYGVVLWEIFS 271

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  117 bits (296), Expect = 8e-30
 Identities = 71/341 (20%), Positives = 112/341 (32%), Gaps = 75/341 (21%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP-GTGLTVAVKTLNHDGLQGHKE 181
            + +  +++     LGEGGF  V            V+    G   A+K +     Q  +E
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDL----------VEGLHDGHFYALKRILCHEQQDREE 72

Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQR----LLVYEFMPRGSLENHLFRRSL---PLP 234
              E +      H N+++L+ YC+ +        L+  F  RG+L N + R       L 
Sbjct: 73  AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132

Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
               + + LG  +GL  +H    +   +RD K +NILL                      
Sbjct: 133 EDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLG--------------------- 168

Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-------GTYGYAAPEYVMT---GHLT 344
                +    L D G         +       +        T  Y APE         + 
Sbjct: 169 ----DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID 224

Query: 345 SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS 404
            R+DV+S G VL  M+ G    D     G+          L  + +      P      S
Sbjct: 225 ERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA-------LAVQNQLSIPQSP----RHS 273

Query: 405 IKGAQKAAQLAAHCLSRDPKARP----LMSEVVEALKPLPN 441
                   QL    ++ DP  RP    L+S++     P P 
Sbjct: 274 ----SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  120 bits (302), Expect = 1e-29
 Identities = 79/310 (25%), Positives = 124/310 (40%), Gaps = 64/310 (20%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
           E  LG+G FG V+ G W   NGT  V        A+KTL   G    + +L E   +  L
Sbjct: 189 EVKLGQGCFGEVWMGTW---NGTTRV--------AIKTL-KPGTMSPEAFLQEAQVMKKL 236

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAF 251
            H  LV+L     E+    +V E+M +GSL + L       L     + +A   A G+A+
Sbjct: 237 RHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           +        ++RD + +NIL+                          ++   K++DFGLA
Sbjct: 296 V---ERMNYVHRDLRAANILVG-------------------------ENLVCKVADFGLA 327

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
           +   E ++            + APE  + G  T +SDV+SFG++L E+ T  R       
Sbjct: 328 RL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386

Query: 372 NGE-HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA-QLAAHCLSRDPKARPLM 429
           N E  + VE          R YR+  P            ++   L   C  ++P+ RP  
Sbjct: 387 NREVLDQVE----------RGYRMPCPP--------ECPESLHDLMCQCWRKEPEERPTF 428

Query: 430 SEVVEALKPL 439
             +   L+  
Sbjct: 429 EYLQAFLEDY 438

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  116 bits (293), Expect = 1e-29
 Identities = 73/334 (21%), Positives = 113/334 (33%), Gaps = 83/334 (24%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
            +F+   L+G GGFG VFK               G T  +K + ++  +  +    EV  
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRI---------DGKTYVIKRVKYNNEKAER----EVKA 57

Query: 189 LGDLVHLNLVKLIGYCIEDDQRL----------------LVYEFMPRGSLENHL-FRRSL 231
           L  L H+N+V   G     D                   +  EF  +G+LE  +  RR  
Sbjct: 58  LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117

Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            L   + +++     KG+ ++H    + +I RD K SNI L                   
Sbjct: 118 KLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLV------------------ 156

Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
                       K+ DFGL             TR  GT  Y +PE + +       D+Y+
Sbjct: 157 -------DTKQVKIGDFGLVT---SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYA 206

Query: 352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA 411
            G++L E+L                              F  L D  +   F     +K 
Sbjct: 207 LGLILAELLHVCD-----TAFETSKF-------------FTDLRDGIISDIFD----KKE 244

Query: 412 AQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDM 445
             L    LS+ P+ RP  SE++  L       + 
Sbjct: 245 KTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  118 bits (298), Expect = 1e-29
 Identities = 66/248 (26%), Positives = 102/248 (41%), Gaps = 59/248 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LGEG FG V     E  G    KP     VAVK L  D   +   + ++E+  +  +  H
Sbjct: 77  LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-----------FRRSLPLPWSIRMK--- 240
            N++ L+G C +D    ++ E+  +G+L  +L           +  S      +  K   
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194

Query: 241 -IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             A   A+G+ +L   A +  I+RD    N+L+                           
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTE------------------------- 226

Query: 300 DYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFG 353
           D   K++DFGLA+D    D  K   + R+    M      APE +     T +SDV+SFG
Sbjct: 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM------APEALFDRIYTHQSDVWSFG 280

Query: 354 VVLLEMLT 361
           V+L E+ T
Sbjct: 281 VLLWEIFT 288

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  117 bits (294), Expect = 1e-29
 Identities = 64/338 (18%), Positives = 113/338 (33%), Gaps = 94/338 (27%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
             +F   ++LG+G FG V K                   A+K + H   +     L+EV 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKA---------RNALDSRYYAIKKIRHTEEK-LSTILSEVM 54

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRL-------------LVYEFMPRGSLENHLFRRSLPLP 234
            L  L H  +V+     +E    +             +  E+   G+L + +   +L   
Sbjct: 55  LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114

Query: 235 ----WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
               W +  +I       L+++H    + +I+RD K  NI +D                 
Sbjct: 115 RDEYWRLFRQILEA----LSYIHS---QGIIHRDLKPMNIFID----------------- 150

Query: 291 LFFNNMLFQDYNAKLSDFGLAK-------------DGPEGDKTHVSTRVMGTYGYAAPEY 337
                   +  N K+ DFGLAK                 G   ++++ + GT  Y A E 
Sbjct: 151 --------ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATE- 200

Query: 338 VM--TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVE-WARPHLGERRRFYRL 394
           V+  TGH   + D+YS G++  EM+           +     V    +            
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMIYP--------FSTGMERVNILKKLRSVSIE----- 247

Query: 395 IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV 432
             P  + +      +   ++    +  DP  RP    +
Sbjct: 248 FPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTL 281

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  116 bits (293), Expect = 1e-29
 Identities = 59/237 (24%), Positives = 91/237 (38%), Gaps = 52/237 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
           +GEG FG V +G               L VA+KT  +      + ++L E   +    H 
Sbjct: 23  IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAKGLAFLH 253
           ++VKLIG   E+    ++ E    G L + L   + SL L   I    A   +  LA+L 
Sbjct: 77  HIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY--AYQLSTALAYL- 132

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
               +  ++RD    N+L+                           +   KL DFGL++ 
Sbjct: 133 --ESKRFVHRDIAARNVLVS-------------------------SNDCVKLGDFGLSRY 165

Query: 314 GPEGDKTHVST-----RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
             +      S      + M      APE +     TS SDV+ FGV + E+L  G +
Sbjct: 166 MEDSTYYKASKGKLPIKWM------APESINFRRFTSASDVWMFGVCMWEILMHGVK 216

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  121 bits (305), Expect = 2e-29
 Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 50/311 (16%)

Query: 64  VSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFND 123
           V+G +  +  +   +  R  P+   +++       S++ +    ++        + T+  
Sbjct: 321 VNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDY-AEIIDEEDTYTM 379

Query: 124 LKLATRNFRPESL-----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
                   + E +     +GEG FG V +G               + VA+KT  +     
Sbjct: 380 PSTRDYEIQRERIELGRCIGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDS 433

Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
             +++L E   +    H ++VKLIG   E+    ++ E    G L + L  R   L  + 
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLAS 492

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +  A   +  LA+L     +  ++RD    N+L+                         
Sbjct: 493 LILYAYQLSTALAYL---ESKRFVHRDIAARNVLVS------------------------ 525

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
             +   KL DFGL++   +      S     +       APE +     TS SDV+ FGV
Sbjct: 526 -SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM----APESINFRRFTSASDVWMFGV 580

Query: 355 VLLEMLT-GRR 364
            + E+L  G +
Sbjct: 581 CMWEILMHGVK 591

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  115 bits (291), Expect = 2e-29
 Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 59/236 (25%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG V  G +             G  VAVK + +D     + +LAE + +  L H 
Sbjct: 29  IGKGEFGDVMLGDY------------RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHS 74

Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLH 253
           NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L   + + +L 
Sbjct: 75  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL- 133

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                  ++RD    N+L+                          +D  AK+SDFGL K+
Sbjct: 134 --EGNNFVHRDLAARNVLVS-------------------------EDNVAKVSDFGLTKE 166

Query: 314 GPEGDKTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
                 T  + ++           APE +     +++SDV+SFG++L E+ + GR 
Sbjct: 167 A---SSTQDTGKLPVKWT------APEALREKKFSTKSDVWSFGILLWEIYSFGRV 213

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  115 bits (291), Expect = 3e-29
 Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 51/235 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G +G V++G         V     LTVAVKTL  +     +E+L E   + ++ H N
Sbjct: 21  LGGGQYGEVYEG---------VWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPN 70

Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
           LV+L+G C  +    ++ EFM  G+L ++L       +   + + +A   +  + +L   
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--- 127

Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
            ++  I+RD    N L+                          +++  K++DFGL++   
Sbjct: 128 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162

Query: 316 EGD-KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
                 H   +            APE +     + +SDV++FGV+L E+ T G  
Sbjct: 163 GDTYTAHAGAKFPIKWT------APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  118 bits (298), Expect = 4e-29
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 51/232 (21%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +G+G FG V  G +             G  VAVK + +D     + +LAE + +  L H 
Sbjct: 201 IGKGEFGDVMLGDY------------RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHS 246

Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLH 253
           NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L   + + +L 
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL- 305

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
                  ++RD    N+L+                          +D  AK+SDFGL K+
Sbjct: 306 --EGNNFVHRDLAARNVLVS-------------------------EDNVAKVSDFGLTKE 338

Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
                 T  + ++     + APE +     +++SDV+SFG++L E+ + GR 
Sbjct: 339 A---SSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  115 bits (290), Expect = 4e-29
 Identities = 69/346 (19%), Positives = 119/346 (34%), Gaps = 83/346 (23%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGW 149
           S  +T   +  S   + + E                          +LG+G +G V+ G 
Sbjct: 1   SMRSTEEGDCESDLLEYDYEYD------------------ENGDRVVLGKGTYGIVYAG- 41

Query: 150 IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ 209
                         + +A+K +     +  +    E+     L H N+V+ +G   E+  
Sbjct: 42  --------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF 93

Query: 210 RLLVYEFMPRGSLENHLFRRSLPLPWS---IRMKIALGAAKGLAFLHEEAERPVIYRDFK 266
             +  E +P GSL   L  +  PL  +   I         +GL +LH+     +++RD K
Sbjct: 94  IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG-FYTKQILEGLKYLHDNQ---IVHRDIK 149

Query: 267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRV 326
             N+L++          G                   K+SDFG +K     +    +   
Sbjct: 150 GDNVLINT-------YSGVL-----------------KISDFGTSKRLAGINPCTET--F 183

Query: 327 MGTYGYAAPEYV---MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 383
            GT  Y APE +     G+    +D++S G  ++EM TG+       P   + L E    
Sbjct: 184 TGTLQYMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGK------PPF--YELGEPQAA 234

Query: 384 --HLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
              +G  +     + P +    S     +A      C   DP  R 
Sbjct: 235 MFKVGMFK-----VHPEIPESMS----AEAKAFILKCFEPDPDKRA 271

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  114 bits (287), Expect = 9e-29
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 47/232 (20%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG G FG V+ G +   NG   V        AVK+L   G      +LAE N +  L H 
Sbjct: 21  LGAGQFGEVWMGYY---NGHTKV--------AVKSLK-QGSMSPDAFLAEANLMKQLQHQ 68

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            LV+L     ++    ++ E+M  GSL + L     + L  +  + +A   A+G+AF+  
Sbjct: 69  RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI-- 125

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
             ER  I+RD + +NIL+                             + K++DFGLA+  
Sbjct: 126 -EERNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLI 159

Query: 315 PEGD-KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
            + +       +      + APE +  G  T +SDV+SFG++L E++T GR 
Sbjct: 160 EDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 209

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  115 bits (289), Expect = 2e-28
 Identities = 66/373 (17%), Positives = 124/373 (33%), Gaps = 64/373 (17%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEV 186
            +     +GEG FG                   G    +K +N   +   KE      EV
Sbjct: 25  KYVRLQKIGEGSFGKAILV---------KSTEDGRQYVIKEINISRMS-SKEREESRREV 74

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGA 245
             L ++ H N+V+      E+    +V ++   G L   +  ++ +       +   +  
Sbjct: 75  AVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              L  +H   +R +++RD K+ NI L                          +D   +L
Sbjct: 135 CLALKHVH---DRKILHRDIKSQNIFLT-------------------------KDGTVQL 166

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
            DFG+A+             + GT  Y +PE        ++SD+++ G VL E+ T + +
Sbjct: 167 GDFGIARVL-NSTVELARACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
            +          +                  P +  H+S         L +    R+P+ 
Sbjct: 225 FEAGSMKNLVLKIISGSF-------------PPVSLHYS----YDLRSLVSQLFKRNPRD 267

Query: 426 RPLMSEVVE---ALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNGQ 482
           RP ++ ++E     K +         +  F      + GS P       +   S+S    
Sbjct: 268 RPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPA 327

Query: 483 RSLSIPNGSYASP 495
           + ++ P   Y  P
Sbjct: 328 QKITKPAAKYGIP 340

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  117 bits (295), Expect = 2e-28
 Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 64/307 (20%)

Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           LG+G FG V+ G W   NGT  V        A+KTL   G    + +L E   +  L H 
Sbjct: 275 LGQGCFGEVWMGTW---NGTTRV--------AIKTL-KPGTMSPEAFLQEAQVMKKLRHE 322

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHE 254
            LV+L     E+    +V E+M +GSL + L       L     + +A   A G+A++  
Sbjct: 323 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-- 379

Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
                 ++RD + +NIL+                           +   K++DFGLA+  
Sbjct: 380 -ERMNYVHRDLRAANILVGE-------------------------NLVCKVADFGLARL- 412

Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
            E ++            + APE  + G  T +SDV+SFG++L E+ T  R       N E
Sbjct: 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472

Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA-QLAAHCLSRDPKARPLMSEV 432
             + VE          R YR+  P            ++   L   C  ++P+ RP    +
Sbjct: 473 VLDQVE----------RGYRMPCPP--------ECPESLHDLMCQCWRKEPEERPTFEYL 514

Query: 433 VEALKPL 439
              L+  
Sbjct: 515 QAFLEDY 521

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  113 bits (285), Expect = 3e-28
 Identities = 71/317 (22%), Positives = 115/317 (36%), Gaps = 75/317 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEV 186
           NFR E  +G G F  V++               G+ VA+K +    L   K     + E+
Sbjct: 33  NFRIEKKIGRGQFSEVYRA---------ACLLDGVPVALKKVQIFDLMDAKARADCIKEI 83

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIAL 243
           + L  L H N++K     IED++  +V E    G L   +    ++   +P     K  +
Sbjct: 84  DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                L  +H    R V++RD K +N+ +                               
Sbjct: 144 QLCSALEHMHS---RRVMHRDIKPANVFIT-------------------------ATGVV 175

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           KL D GL +       T   + V GT  Y +PE +       +SD++S G +L EM   +
Sbjct: 176 KLGDLGLGRF-FSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLI--------DPRLEGHFSIKGAQKAAQLA 415
                              P  G++   Y L          P    H+S    ++  QL 
Sbjct: 234 ------------------SPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS----EELRQLV 271

Query: 416 AHCLSRDPKARPLMSEV 432
             C++ DP+ RP ++ V
Sbjct: 272 NMCINPDPEKRPDVTYV 288

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  113 bits (285), Expect = 3e-28
 Identities = 68/256 (26%), Positives = 100/256 (39%), Gaps = 70/256 (27%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
           LGEG FG V K              T  TVAVK L  +      ++ L+E N L  + H 
Sbjct: 31  LGEGEFGKVVKA--TAFHLKGRAGYT--TVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR----------------- 238
           +++KL G C +D   LL+ E+   GSL   L R S  +                      
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDER 145

Query: 239 -------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
                  +  A   ++G+ +L   AE  +++RD    NIL+                   
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAE----------------- 185

Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTS 345
                       K+SDFGL++D  E D        R+    M      A E +     T+
Sbjct: 186 --------GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM------AIESLFDHIYTT 231

Query: 346 RSDVYSFGVVLLEMLT 361
           +SDV+SFGV+L E++T
Sbjct: 232 QSDVWSFGVLLWEIVT 247

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  113 bits (284), Expect = 3e-28
 Identities = 65/334 (19%), Positives = 110/334 (32%), Gaps = 89/334 (26%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
           +F P   LG GGFG VF+                   A+K +     +  +E  + EV  
Sbjct: 6   DFEPIQCLGRGGFGVVFEA---------KNKVDDCNYAIKRIRLPNRELAREKVMREVKA 56

Query: 189 LGDLVHLNLVKLIGYCIEDD---------QRLLVY---EFMPRGSLENHLFRR--SLPLP 234
           L  L H  +V+     +E +          ++ +Y   +   + +L++ +  R       
Sbjct: 57  LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116

Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
            S+ + I L  A+ + FLH    + +++RD K SNI                        
Sbjct: 117 RSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFT--------------------- 152

Query: 295 NMLFQDYNAKLSDFGLAK----------DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT 344
                D   K+ DFGL                       T  +GT  Y +PE +     +
Sbjct: 153 ----MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208

Query: 345 SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID----PRLE 400
            + D++S G++L E+L           + +            ER R    +     P L 
Sbjct: 209 HKVDIFSLGLILFELLY--------PFSTQM-----------ERVRTLTDVRNLKFPPLF 249

Query: 401 GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                        +    LS  P  RP    ++E
Sbjct: 250 TQKY----PCEYVMVQDMLSPSPMERPEAINIIE 279

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  114 bits (287), Expect = 3e-28
 Identities = 49/304 (16%), Positives = 89/304 (29%), Gaps = 31/304 (10%)

Query: 68  STHYESKSTNDTSRDQPA----AAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFND 123
           S    S  T D             +I    +  ++  SS     E       ++  T  +
Sbjct: 2   SPQMSSLGTVDAPNFIVGNPWDDKLIFKLLSGLSKPVSSYPNTFEWQCKLPAIKPKT--E 59

Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
            +L ++      LLGEG F  V++    +      K        +K              
Sbjct: 60  FQLGSKLVYVHHLLGEGAFAQVYEA--TQGDLNDAK--NKQKFVLKVQKPANPWEFYIGT 115

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----PLPWSIRM 239
             +  L   +    +K     +  +  +LV E    G+L N +          +P  + +
Sbjct: 116 QLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVI 175

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             A+     +  +H+     +I+ D K  N +L     E                +    
Sbjct: 176 SFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQD--------------DEDDL 218

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
                L D G + D     K  + T    T G+   E +       + D +     +  M
Sbjct: 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCM 278

Query: 360 LTGR 363
           L G 
Sbjct: 279 LFGT 282

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  114 bits (288), Expect = 1e-27
 Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 45/234 (19%)

Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
           E  LG G FG V+   +   N    V        AVKT+   G    + +LAE N +  L
Sbjct: 193 EKKLGAGQFGEVWMATY---NKHTKV--------AVKTM-KPGSMSVEAFLAEANVMKTL 240

Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALGAAKGLAF 251
            H  LVKL     ++    ++ EFM +GSL + L        P    +  +   A+G+AF
Sbjct: 241 QHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           +    +R  I+RD + +NIL+ A                             K++DFGLA
Sbjct: 300 I---EQRNYIHRDLRAANILVSA-------------------------SLVCKIADFGLA 331

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR 364
           +   E ++            + APE +  G  T +SDV+SFG++L+E++T GR 
Sbjct: 332 RV-IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI 384

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  111 bits (279), Expect = 1e-27
 Identities = 62/308 (20%), Positives = 100/308 (32%), Gaps = 53/308 (17%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK--TLNHDGLQGHKEWLAE 185
           T  F     +G G FG VFK          VK   G   A+K       G    +  L E
Sbjct: 10  TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKRSKKPLAGSVDEQNALRE 60

Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKI 241
           V     L  H ++V+      EDD  L+  E+   GSL + +   +R       +    +
Sbjct: 61  VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 120

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
            L   +GL ++H      +++ D K SNI +      N              ++      
Sbjct: 121 LLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEE------GDEDDWASNKV 171

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEM 359
             K+ D G            V     G   + A E +     HL   +D+++  + ++  
Sbjct: 172 MFKIGDLGHVT---RISSPQVEE---GDSRFLANEVLQENYTHLPK-ADIFALALTVVCA 224

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
                      P       +W     G          PR+    S    Q+  +L    +
Sbjct: 225 AGAEPL-----PRNGD---QWHEIRQGRL--------PRIPQVLS----QEFTELLKVMI 264

Query: 420 SRDPKARP 427
             DP+ RP
Sbjct: 265 HPDPERRP 272

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  111 bits (280), Expect = 1e-27
 Identities = 74/320 (23%), Positives = 113/320 (35%), Gaps = 74/320 (23%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL--TVAVKTLNHDGLQGHKEWLA---- 184
           ++    LG GG   V+               T L   VA+K +     +  +E L     
Sbjct: 13  YKIVDKLGGGGMSTVYLAE-----------DTILNIKVAIKAI-FIPPREKEETLKRFER 60

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           EV+    L H N+V +I    EDD   LV E++   +L  ++     PL     +     
Sbjct: 61  EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQ 119

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
              G+   H+     +++RD K  NIL+D                          +   K
Sbjct: 120 ILDGIKHAHD---MRIVHRDIKPQNILID-------------------------SNKTLK 151

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFG+AK   E   T  +  V+GT  Y +PE          +D+YS G+VL EML G  
Sbjct: 152 IFDFGIAKALSETSLTQTNH-VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE- 209

Query: 365 SMDKNRP-NGEHNLVEWARPHLGE-----RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
                 P NGE   V  A  H+ +          + I   L              +    
Sbjct: 210 -----PPFNGE-TAVSIAIKHIQDSVPNVTTDVRKDIPQSLS------------NVILRA 251

Query: 419 LSRDPKARPL-MSEVVEALK 437
             +D   R   + E+ + L 
Sbjct: 252 TEKDKANRYKTIQEMKDDLS 271

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  112 bits (282), Expect = 1e-27
 Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 59/246 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LG G FG V +      G           VAVK L         +  ++E+  +  L  H
Sbjct: 54  LGAGAFGKVVEA--TAFGLGKEDAVL--KVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR-------------MKI 241
            N+V L+G C      L++ E+   G L N L R+S  L                  +  
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
           +   A+G+AFL   A +  I+RD    N+LL                            +
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGH 201

Query: 302 NAKLSDFGLAKDGPEGDKTHVST------RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
            AK+ DFGLA+D        V        + M      APE +     T +SDV+S+G++
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWM------APESIFDCVYTVQSDVWSYGIL 255

Query: 356 LLEMLT 361
           L E+ +
Sbjct: 256 LWEIFS 261

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  111 bits (280), Expect = 1e-27
 Identities = 65/250 (26%), Positives = 95/250 (38%), Gaps = 64/250 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LG G FG V +   +  G          TVAVK L        H+  ++E+  L  +  H
Sbjct: 35  LGRGAFGQVIEA--DAFGIDKTATCR--TVAVKMLKEGATHSEHRALMSELKILIHIGHH 90

Query: 195 LNLVKLIGYCIEDDQ-RLLVYEFMPRGSLENHLFRRSLPLPWSIR--------------- 238
           LN+V L+G C +     +++ EF   G+L  +L R         +               
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 149

Query: 239 -MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +  +   AKG+ FL   A R  I+RD    NILL                         
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE----------------------- 183

Query: 298 FQDYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSRSDVYS 351
                 K+ DFGLA+D  +          R+    M      APE +     T +SDV+S
Sbjct: 184 --KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM------APETIFDRVYTIQSDVWS 235

Query: 352 FGVVLLEMLT 361
           FGV+L E+ +
Sbjct: 236 FGVLLWEIFS 245

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  111 bits (279), Expect = 2e-27
 Identities = 65/250 (26%), Positives = 91/250 (36%), Gaps = 63/250 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LG G FG V +      G          TVAVK L     L   +  ++E+  L  L  H
Sbjct: 31  LGAGAFGKVVEA--TAYGLIKSDAAM--TVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR---------------- 238
           +N+V L+G C      L++ E+   G L N L R+      S                  
Sbjct: 87  MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 239 -MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            +  +   AKG+AFL   A +  I+RD    NILL                         
Sbjct: 147 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTH----------------------- 180

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVST------RVMGTYGYAAPEYVMTGHLTSRSDVYS 351
                 K+ DFGLA+D        V        + M      APE +     T  SDV+S
Sbjct: 181 --GRITKICDFGLARDIKNDSNYVVKGNARLPVKWM------APESIFNCVYTFESDVWS 232

Query: 352 FGVVLLEMLT 361
           +G+ L E+ +
Sbjct: 233 YGIFLWELFS 242

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  111 bits (279), Expect = 6e-27
 Identities = 68/380 (17%), Positives = 124/380 (32%), Gaps = 80/380 (21%)

Query: 70  HYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATR 129
           H+   S+    R        ++        +      +++   +S     +        R
Sbjct: 2   HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKG-----R 56

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVN 187
            +     +G GG   VF+          V        A+K +N +    Q    +  E+ 
Sbjct: 57  IYSILKQIGSGGSSKVFQ----------VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 106

Query: 188 FLGDLVHLNL--VKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           +L  L   +   ++L  Y    DQ + +V E      L + L ++   +    R      
Sbjct: 107 YLNKLQQHSDKIIRLYDY-EITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKN 163

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             + +  +H+     +++ D K +N L+                     + ML      K
Sbjct: 164 MLEAVHTIHQHG---IVHSDLKPANFLIV--------------------DGML------K 194

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----------TGHLTSRSDVYSFG 353
           L DFG+A        + V    +G   Y  PE +               ++ +SDV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254

Query: 354 VVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
            +L  M  G+       P     N +           + + +IDP  E  F     +   
Sbjct: 255 CILYYMTYGK------TPFQQIINQIS----------KLHAIIDPNHEIEFPDIPEKDLQ 298

Query: 413 QLAAHCLSRDPKARPLMSEV 432
            +   CL RDPK R  + E+
Sbjct: 299 DVLKCCLKRDPKQRISIPEL 318

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  113 bits (283), Expect = 9e-27
 Identities = 70/323 (21%), Positives = 106/323 (32%), Gaps = 62/323 (19%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
            +  +  LG GGFG V +          +   TG  VA+K    +    ++E W  E+  
Sbjct: 15  PWEMKERLGTGGFGYVLRW---------IHQDTGEQVAIKQCRQELSPKNRERWCLEIQI 65

Query: 189 LGDLVHLNLVKLIGYCIEDDQR--------LLVYEFMPRGSLENHLFR--RSLPLPWSIR 238
           +  L H N+V      + D  +        LL  E+   G L  +L +      L     
Sbjct: 66  MKKLNHPNVVSA--REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
             +    +  L +LHE     +I+RD K  NI+L                          
Sbjct: 124 RTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGP---------------------- 158

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
           Q    K+ D G AK+  +G+       V GT  Y APE +     T   D +SFG +  E
Sbjct: 159 QRLIHKIIDLGYAKELDQGELCT--EFV-GTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215

Query: 359 MLTGRR---------SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ 409
            +TG R                   +  +       G  +    L  P    H S   A 
Sbjct: 216 CITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN---HLSGILAG 272

Query: 410 KAAQLAAHCLSRDPKARPLMSEV 432
           K  +     L    + R    + 
Sbjct: 273 KLERWLQCMLMWHQRQRGTDPQN 295

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  108 bits (273), Expect = 1e-26
 Identities = 68/320 (21%), Positives = 105/320 (32%), Gaps = 66/320 (20%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----EV 186
           +R   L+G GG G V++                  VA+K +  + L     +      E 
Sbjct: 36  YRLRRLVGRGGMGDVYEA---------EDTVRERIVALKLM-SETLSSDPVFRTRMQREA 85

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
              G L   ++V +  +   D Q  +    +    L   L RR  PL     + I     
Sbjct: 86  RTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAML-RRQGPLAPPRAVAIVRQIG 144

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
             L   H        +RD K  NIL+ A                         D  A L 
Sbjct: 145 SALDAAHA---AGATHRDVKPENILVSA-------------------------DDFAYLV 176

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           DFG+A    +   T +    +GT  Y APE     H T R+D+Y+   VL E LTG    
Sbjct: 177 DFGIASATTDEKLTQLGN-TVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS--- 232

Query: 367 DKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
               P  G+   +     H+ +       + P +              + A  ++++P+ 
Sbjct: 233 ---PPYQGDQ--LSVMGAHINQAIPRPSTVRPGI--------PVAFDAVIARGMAKNPED 279

Query: 426 RP-----LMSEVVEALKPLP 440
           R      L +    AL    
Sbjct: 280 RYVTCGDLSAAAHAALATAD 299

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  108 bits (272), Expect = 2e-26
 Identities = 65/333 (19%), Positives = 113/333 (33%), Gaps = 75/333 (22%)

Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
               F  + +  R +     +G GG   VF+          V        A+K +N +  
Sbjct: 16  ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQ----------VLNEKKQIYAIKYVNLEEA 65

Query: 177 QGH--KEWLAEVNFLGDLVHLNL--VKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSL 231
                  +  E+ +L  L   +   ++L  Y    DQ + +V E      L + L ++  
Sbjct: 66  DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY-EITDQYIYMVMECG-NIDLNSWLKKKK- 122

Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            +    R        + +  +H+     +++ D K +N L+                   
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV------------------ 161

Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----------T 340
             + ML      KL DFG+A        + V    +GT  Y  PE +             
Sbjct: 162 --DGML------KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213

Query: 341 GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRL 399
             ++ +SDV+S G +L  M  G+       P     N +           + + +IDP  
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKT------PFQQIINQIS----------KLHAIIDPNH 257

Query: 400 EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV 432
           E  F     +    +   CL RDPK R  + E+
Sbjct: 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  108 bits (273), Expect = 2e-26
 Identities = 57/255 (22%), Positives = 89/255 (34%), Gaps = 68/255 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LG G FG V        G +         VAVK L         +  ++E+  +  L  H
Sbjct: 53  LGSGAFGKVMNA--TAYGISKTGVSI--QVAVKMLKEKADSSEREALMSELKMMTQLGSH 108

Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR---------------- 238
            N+V L+G C       L++E+   G L N+L  +                         
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168

Query: 239 ------MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
                 +  A   AKG+ FL     +  ++RD    N+L+                    
Sbjct: 169 LTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTH------------------ 207

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGD--KTHVSTRV----MGTYGYAAPEYVMTGHLTSR 346
                      K+ DFGLA+D           + R+    M      APE +  G  T +
Sbjct: 208 -------GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWM------APESLFEGIYTIK 254

Query: 347 SDVYSFGVVLLEMLT 361
           SDV+S+G++L E+ +
Sbjct: 255 SDVWSYGILLWEIFS 269

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  109 bits (275), Expect = 2e-26
 Identities = 65/359 (18%), Positives = 106/359 (29%), Gaps = 68/359 (18%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
           +LG+G    VF+G             TG   A+K  N+       +  + E   L  L H
Sbjct: 16  ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66

Query: 195 LNLVKLIGYCIEDDQRLLVY---EFMPRGSLENHLFR--RSLPLPWSIRMKIALGAAKGL 249
            N+VKL     E+          EF P GSL   L     +  LP S  + +      G+
Sbjct: 67  KNIVKLFA-IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             L E     +++R+ K  NI+                                KL+DFG
Sbjct: 126 NHLRE---NGIVHRNIKPGNIMRVIGEDGQS---------------------VYKLTDFG 161

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS--------DVYSFGVVLLEMLT 361
            A++  + ++    +   GT  Y  P+      L            D++S GV      T
Sbjct: 162 AARELEDDEQFV--SLY-GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

Query: 362 GRR-------------SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           G                M K         +   +        +    D  +    S    
Sbjct: 219 GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSG--DMPVSCSLSRGLQ 276

Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTR 467
                + A+ L  D +      +       + +   +    +  Q M A +I       
Sbjct: 277 VLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVIH--VFSLQQMTAHKIYIHSYNT 333

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  109 bits (274), Expect = 4e-26
 Identities = 61/309 (19%), Positives = 103/309 (33%), Gaps = 58/309 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +F P+ +LG G  G +    +               VAVK +  +          EV  L
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMF----------DNRDVAVKRILPECFSFADR---EVQLL 71

Query: 190 GDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
            +   H N+++      +   + +  E     +L+ ++ ++         + +      G
Sbjct: 72  RESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSG 130

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           LA LH      +++RD K  NIL+    A    K                    A +SDF
Sbjct: 131 LAHLHS---LNIVHRDLKPHNILISMPNAHGKIK--------------------AMISDF 167

Query: 309 GLAK--DGPEGDKTHVSTRVMGTYGYAAPEYV---MTGHLTSRSDVYSFGVVLLEMLTGR 363
           GL K         +  S    GT G+ APE +      + T   D++S G V   +++  
Sbjct: 168 GLCKKLAVGRHSFSRRSGVP-GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG 226

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
                  P G+    +              L     E H        A +L    ++ DP
Sbjct: 227 S-----HPFGKSLQRQ-----ANILLGACSLDCLHPEKHED----VIARELIEKMIAMDP 272

Query: 424 KARPLMSEV 432
           + RP    V
Sbjct: 273 QKRPSAKHV 281

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  106 bits (266), Expect = 1e-25
 Identities = 61/318 (19%), Positives = 97/318 (30%), Gaps = 66/318 (20%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
           +LG+G    VF+G             TG   A+K  N+       +  + E   L  L H
Sbjct: 16  ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66

Query: 195 LNLVKLIGYCIEDDQRLLVY---EFMPRGSLENHLFR--RSLPLPWSIRMKIALGAAKGL 249
            N+VKL     E+          EF P GSL   L     +  LP S  + +      G+
Sbjct: 67  KNIVKLFA-IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             L E     +++R+ K  NI+                                KL+DFG
Sbjct: 126 NHLRE---NGIVHRNIKPGNIMRVIGEDGQS---------------------VYKLTDFG 161

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--------TSRSDVYSFGVVLLEMLT 361
            A++  + ++    +   GT  Y  P+      L         +  D++S GV      T
Sbjct: 162 AARELEDDEQFV--SLY-GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

Query: 362 GRR-------------SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
           G                M K         +   +        +    D  +    S    
Sbjct: 219 GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSG--DMPVSCSLSRGLQ 276

Query: 409 QKAAQLAAHCLSRDPKAR 426
                + A+ L  D +  
Sbjct: 277 VLLTPVLANILEADQEKC 294

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  109 bits (274), Expect = 1e-25
 Identities = 59/314 (18%), Positives = 104/314 (33%), Gaps = 78/314 (24%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFL 189
           +  +  +  GG G ++                G  V +K L H G    +   +AE  FL
Sbjct: 82  YEVKGCIAHGGLGWIYLALDRNVN--------GRPVVLKGLVHSGDAEAQAMAMAERQFL 133

Query: 190 GDLVHLNLVKLIGYCIEDDQRL-----LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
            ++VH ++V++  +    D+       +V E++   SL+     + LP+  +I     L 
Sbjct: 134 AEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-GQKLPVAEAIA--YLLE 190

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
               L++LH      ++Y D K  NI+L   +                           K
Sbjct: 191 ILPALSYLHS---IGLVYNDLKPENIMLTEEQL--------------------------K 221

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           L D G                + GT G+ APE ++    T  +D+Y+ G  L  +     
Sbjct: 222 LIDLGAVSR-----INSFGY-LYGTPGFQAPE-IVRTGPTVATDIYTVGRTLAALTLDLP 274

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
           + +    +G         P L     + RL+                       +  DP+
Sbjct: 275 TRNGRYVDGLPEDD----PVLKTYDSYGRLL--------------------RRAIDPDPR 310

Query: 425 ARPL-MSEVVEALK 437
            R     E+   L 
Sbjct: 311 QRFTTAEEMSAQLT 324

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  107 bits (267), Expect = 2e-25
 Identities = 44/406 (10%), Positives = 84/406 (20%), Gaps = 89/406 (21%)

Query: 83  QPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGF 142
           +    +I        +  ++  +                + L    R  +    L  G  
Sbjct: 16  KREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDR 75

Query: 143 GCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVK 199
             VF                    A+K           E             L+  +  +
Sbjct: 76  SVVFLV---------RDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEE 126

Query: 200 LIGYC-----------------------IEDDQRLLVYEFMPR--------GSLENHLFR 228
                                        +D         MP          S  + ++ 
Sbjct: 127 ARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYV 186

Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
                       +     +  A L     + +++  F   N+ +                
Sbjct: 187 FRGDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIM--------------- 228

Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSR 346
                      D    L D         G +   S+       YA  E++       T  
Sbjct: 229 ----------PDGRLMLGDVSALW--KVGTRGPASS---VPVTYAPREFLNASTATFTHA 273

Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
            + +  G+ +  +           P  +     W RP L         +           
Sbjct: 274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKG---SWKRPSLRVPGTDS--LAFGSCTPLP-- 326

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVE--ALKPLPNLKDMASSSY 450
                  L    L+ D + R L  E +E      L N    + S+ 
Sbjct: 327 --DFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLSTG 370

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  106 bits (266), Expect = 2e-25
 Identities = 67/372 (18%), Positives = 126/372 (33%), Gaps = 79/372 (21%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
            +G GG   VF+                   A+K +N +         +  E+ +L  L 
Sbjct: 16  QIGSGGSSKVFQV----------LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65

Query: 194 HLNL--VKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
             +   ++L  Y    DQ + +V E      L + L ++   +    R        + + 
Sbjct: 66  QHSDKIIRLYDY-EITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVH 122

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
            +H+     +++ D K +N L+                     + ML      KL DFG+
Sbjct: 123 TIHQHG---IVHSDLKPANFLIV--------------------DGML------KLIDFGI 153

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----------TGHLTSRSDVYSFGVVLLEM 359
           A        + V    +GT  Y  PE +               ++ +SDV+S G +L  M
Sbjct: 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 213

Query: 360 LTGRRSMDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
             G+       P     N +           + + +IDP  E  F     +    +   C
Sbjct: 214 TYGKT------PFQQIINQIS----------KLHAIIDPNHEIEFPDIPEKDLQDVLKCC 257

Query: 419 LSRDPKARPLMSEVVE----ALKPLPNLKDMASSSYYFQTMQAERIGSSPNTRNGIRAQG 474
           L RDPK R  + E++      ++  P  +    ++   + +  + +G +        A+ 
Sbjct: 258 LKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKT 317

Query: 475 GSLSRNGQRSLS 486
                +G  S +
Sbjct: 318 LYEHYSGGESHN 329

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  107 bits (268), Expect = 2e-25
 Identities = 49/353 (13%), Positives = 92/353 (26%), Gaps = 110/353 (31%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD------------- 174
            R     ++LG+       +   +E         TG +  V                   
Sbjct: 77  PRTLVRGTVLGQEDPYAYLEATDQE---------TGESFEVHVPYFTERPPSNAIKQMKE 127

Query: 175 ---------GLQGHKEWLAEVNFL--GDLVHLNLVKLIGYCIEDDQRLLV---YEFMPRG 220
                    G++  K+    + F+   DLV     K +     D++ + V   +   PR 
Sbjct: 128 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 187

Query: 221 SLENHLFRRSL--------PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL 272
                 F   L         L    R+++ L   + LA LH      +++   +  +I+L
Sbjct: 188 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVL 244

Query: 273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 332
           D                               L+ F       +G     S       G+
Sbjct: 245 DQ-------------------------RGGVFLTGFEHLV--RDGA----SAVSPIGRGF 273

Query: 333 AAPEYVM----------TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 382
           A PE                +T   D ++ G+ +  +           PN +   +  + 
Sbjct: 274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD------LPNTDDAALGGSE 327

Query: 383 PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
                 +       P+               L    L    + R L  + +E 
Sbjct: 328 WIFRSCKNI-----PQP-----------VRALLEGFLRYPKEDRLLPLQAMET 364

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  103 bits (260), Expect = 4e-25
 Identities = 59/315 (18%), Positives = 108/315 (34%), Gaps = 62/315 (19%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEV 186
            ++     +G G +G   K           +   G  +  K L++  +     +  ++EV
Sbjct: 6   EDYEVLYTIGTGSYGRCQKI---------RRKSDGKILVWKELDYGSMTEAEKQMLVSEV 56

Query: 187 NFLGDLVHLNLVKLIG-YCIEDDQRL-LVYEFMPRGSLENHL---FRRSLPLPWSIRMKI 241
           N L +L H N+V+         +  L +V E+   G L + +    +    L     +++
Sbjct: 57  NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116

Query: 242 ALGAAKGLAFLHE--EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                  L   H   +    V++RD K +N+ LD                          
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD-------------------------G 151

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
             N KL DFGLA+     D +   T V GT  Y +PE +       +SD++S G +L E+
Sbjct: 152 KQNVKLGDFGLARIL-NHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
                             +   +               R+   +S     +  ++    L
Sbjct: 210 CALMPPFTAFSQKELAGKIREGKF-------------RRIPYRYS----DELNEIITRML 252

Query: 420 SRDPKARPLMSEVVE 434
           +     RP + E++E
Sbjct: 253 NLKDYHRPSVEEILE 267

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  105 bits (263), Expect = 5e-25
 Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 45/267 (16%)

Query: 101 SSTSKLEEELKVASRLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAP 157
               +LE + +   RL  F     K   L   +F   S LG G  G VFK   +      
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKP----- 56

Query: 158 VKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEF 216
               +GL +A K ++ +       + + E+  L +     +V   G    D +  +  E 
Sbjct: 57  ----SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112

Query: 217 MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
           M  GSL+  + +++  +P  I  K+++   KGL +L E+    +++RD K SNIL+++  
Sbjct: 113 MDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRG 169

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                                      KL DFG++    +   +  ++ V GT  Y +PE
Sbjct: 170 -------------------------EIKLCDFGVSG---QLIDSMANSFV-GTRSYMSPE 200

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGR 363
            +   H + +SD++S G+ L+EM  GR
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  105 bits (263), Expect = 6e-25
 Identities = 51/420 (12%), Positives = 105/420 (25%), Gaps = 120/420 (28%)

Query: 70  HYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFN------- 122
           H+ S    +     P   VI        ++N  T+    +    S +    +N       
Sbjct: 5   HHHSSGRENLYFQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRV 64

Query: 123 --DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---- 176
             +L    R     ++LG+       +              TG +  V            
Sbjct: 65  ESELGERPRTLVRGTVLGQEDPYAYLEA---------TDQETGESFEVHVPYFTERPPSN 115

Query: 177 ------------------------QGHKEWLAEVNFLGDLVHLNLVKLIGYC--IEDDQR 210
                                   + H  ++   + + D     ++++      +    R
Sbjct: 116 AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSR 175

Query: 211 LLVYEFMP-----RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
             +Y  M       G +          L    R+++ L   + LA LH      +++   
Sbjct: 176 FFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYL 232

Query: 266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR 325
           +  +I+LD                         Q     L+ F       +G +      
Sbjct: 233 RPVDIVLD-------------------------QRGGVFLTGFEHLV--RDGARV----V 261

Query: 326 VMGTYGYAAPEYVMT-----------GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
              + G+  PE                 +T   D ++ G+V+  +           P  +
Sbjct: 262 SSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD------LPITK 315

Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
              +  +                R   +      Q    L    L    + R L  + +E
Sbjct: 316 DAALGGSEWIF------------RSCKNIP----QPVRALLEGFLRYPKEDRLLPLQAME 359

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  102 bits (256), Expect = 2e-24
 Identities = 68/332 (20%), Positives = 115/332 (34%), Gaps = 74/332 (22%)

Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL--TVAVKTLNHDGLQGHKEWL 183
           L+ R +    +LG GG   V                      VAVK L    L     + 
Sbjct: 10  LSDR-YELGEILGFGGMSEVHLAR-----------DLRDHRDVAVKVL-RADLARDPSFY 56

Query: 184 A----EVNFLGDLVHLNLVKLIGYCIEDDQRL----LVYEFMPRGSLENHLFRRSLPLPW 235
                E      L H  +V +      +        +V E++   +L + +     P+  
Sbjct: 57  LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP 115

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              +++   A + L F H+     +I+RD K +NI++                       
Sbjct: 116 KRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMIS---------------------- 150

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVST-RVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
                   K+ DFG+A+   +   +   T  V+GT  Y +PE      + +RSDVYS G 
Sbjct: 151 ---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207

Query: 355 VLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           VL E+LTG        P  G+ + V  A  H+ E           L        +     
Sbjct: 208 VLYEVLTGE------PPFTGD-SPVSVAYQHVREDPIPPSARHEGL--------SADLDA 252

Query: 414 LAAHCLSRDPKARP-----LMSEVVEALKPLP 440
           +    L+++P+ R      + +++V      P
Sbjct: 253 VVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  100 bits (252), Expect = 1e-23
 Identities = 80/360 (22%), Positives = 121/360 (33%), Gaps = 79/360 (21%)

Query: 84  PAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFG 143
           PA A           +  + +      ++   L          + R +     LG+GGF 
Sbjct: 2   PAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVD------PRSRRRYVRGRFLGKGGFA 55

Query: 144 CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKL 200
             F+              T    A K +    L       +   E++    L H ++V  
Sbjct: 56  KCFEI---------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106

Query: 201 IGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP 259
            G+  ED+  + +V E   R SL     RR        R         G  +LH      
Sbjct: 107 HGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR-YYLRQIVLGCQYLHR---NR 161

Query: 260 VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA-KDGPEGD 318
           VI+RD K  N+ L+                          D   K+ DFGLA K   +G+
Sbjct: 162 VIHRDLKLGNLFLNE-------------------------DLEVKIGDFGLATKVEYDGE 196

Query: 319 KTHVSTRVMGTYGYAAPEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 377
           +  V     GT  Y APE V++    S   DV+S G ++  +L G+       P     L
Sbjct: 197 RKKVLC---GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGK------PPFETSCL 246

Query: 378 VEWARPHLGERRRFYRLI---DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
            E            Y  I   +  +  H +      AA L    L  DP ARP ++E++ 
Sbjct: 247 KE-----------TYLRIKKNEYSIPKHIN----PVAASLIQKMLQTDPTARPTINELLN 291

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  102 bits (257), Expect = 2e-23
 Identities = 86/347 (24%), Positives = 117/347 (33%), Gaps = 66/347 (19%)

Query: 31  DEVEVEEEEETGCWVKLRFFGSCISSRSKVDSSVSGTSTHYESKSTNDTSR--DQPAAAV 88
            E EV  +++       +  G  ++      +             TN T R    P   +
Sbjct: 88  AEYEVTPDDKR------KACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDL 141

Query: 89  ISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDL---KLATRNFRPESLLGEGGFGCV 145
               T    E   S +   + L      R   +  L    +    FR   +LG+GGFG V
Sbjct: 142 FQELTRLTHE-YLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEV 200

Query: 146 FKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIG 202
                     A     TG   A K L    ++  K     L E   L  +    +V L  
Sbjct: 201 C---------ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA- 250

Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK-----IALGAAKGLAFLHEEA 256
           Y  E    L LV   M  G L+ H++          R       I  G    L  LH E 
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG----LEDLHRER 306

Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
              ++YRD K  NILLD                            + ++SD GLA   PE
Sbjct: 307 ---IVYRDLKPENILLDD-------------------------HGHIRISDLGLAVHVPE 338

Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           G       RV GT GY APE V     T   D ++ G +L EM+ G+
Sbjct: 339 GQTIK--GRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  100 bits (251), Expect = 4e-23
 Identities = 71/328 (21%), Positives = 108/328 (32%), Gaps = 77/328 (23%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
              E +LG G  G V                 G  VAVK +    +      L E+  L 
Sbjct: 17  VVSEKILGYGSSGTVVFQGSF----------QGRPVAVKRML---IDFCDIALMEIKLLT 63

Query: 191 DLV-HLNLVKLIGYCIEDDQRL--LVYEFMPRGSL-----ENHLFRRSLPLPWSIRMKIA 242
           +   H N+++   YC E   R   +  E     +L       ++   +L L         
Sbjct: 64  ESDDHPNVIRY--YCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISL 120

Query: 243 L-GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
           L   A G+A LH      +I+RD K  NIL+                          ++ 
Sbjct: 121 LRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTAD------------QQTGAENL 165

Query: 302 NAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE-------YVMTGHLTSRSDVYS 351
              +SDFGL K    G    +T+++    GT G+ APE             LT   D++S
Sbjct: 166 RILISDFGLCKKLDSGQSSFRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224

Query: 352 FGVVLLEMLTG-------RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS 404
            G V   +L+        + S + N   G  +L E    H               +    
Sbjct: 225 MGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLH---------------DRSLI 269

Query: 405 IKGAQKAAQLAAHCLSRDPKARPLMSEV 432
                +A  L +  +  DP  RP   +V
Sbjct: 270 ----AEATDLISQMIDHDPLKRPTAMKV 293

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 98.0 bits (245), Expect = 5e-23
 Identities = 75/321 (23%), Positives = 111/321 (34%), Gaps = 85/321 (26%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAE 185
           R +     LG+GGF   F+              T    A K +    L       +   E
Sbjct: 15  RRYVRGRFLGKGGFAKCFEI---------SDADTKEVFAGKIVPKSLLLKPHQREKMSME 65

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRM----- 239
           ++    L H ++V   G+  ED+  + +V E   R SL     RR         +     
Sbjct: 66  ISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRK-------ALTEPEA 117

Query: 240 -KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
                    G  +LH      VI+RD K  N+ L+                         
Sbjct: 118 RYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNE------------------------ 150

Query: 299 QDYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS-RSDVYSFGVVL 356
            D   K+ DFGLA K   +G++  V     GT  Y APE V++    S   DV+S G ++
Sbjct: 151 -DLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPE-VLSKKGHSFEVDVWSIGCIM 205

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI---DPRLEGHFSIKGAQKAAQ 413
             +L G+       P     L E            Y  I   +  +  H +      AA 
Sbjct: 206 YTLLVGK------PPFETSCLKE-----------TYLRIKKNEYSIPKHIN----PVAAS 244

Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L    L  DP ARP ++E++ 
Sbjct: 245 LIQKMLQTDPTARPTINELLN 265

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 98.6 bits (246), Expect = 8e-23
 Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 74/256 (28%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------------ 184
           L +G F  +     E++             A+K      L+  +++              
Sbjct: 39  LNQGKFNKIILC--EKDNK---------FYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87

Query: 185 -----EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-------FRRSL 231
                E+  + D+ +   +   G  I +   + ++YE+M   S+              + 
Sbjct: 88  DDFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146

Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            +P  +   I        +++H   E+ + +RD K SNIL+D                  
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDK----------------- 187

Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGD-KTHVSTRVMGTYGYAAPEYVMTGHLT---SRS 347
                   +   KLSDFG ++   +   K        GTY +  PE   +   +   ++ 
Sbjct: 188 --------NGRVKLSDFGESEYMVDKKIKG-----SRGTYEFMPPE-FFSNESSYNGAKV 233

Query: 348 DVYSFGVVLLEMLTGR 363
           D++S G+ L  M    
Sbjct: 234 DIWSLGICLYVMFYNV 249

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 97.3 bits (243), Expect = 8e-23
 Identities = 67/306 (21%), Positives = 112/306 (36%), Gaps = 71/306 (23%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDL 192
            LG+G FG V+            +  +   +A+K L    L+      +   EV     L
Sbjct: 16  PLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
            H N+++L GY   D  R+ L+ E+ P G++   L ++                A  L++
Sbjct: 67  RHPNILRLYGY-FHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSY 124

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H    + VI+RD K  N+LL +                             K++DFG +
Sbjct: 125 CHS---KRVIHRDIKPENLLLGS-------------------------AGELKIADFGWS 156

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
              P   +        GT  Y  PE +       + D++S GV+  E L G+       P
Sbjct: 157 VHAP-SSRRTDLC---GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK------PP 206

Query: 372 NGEHNLVEWARPHLGERRRFYRLI---DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
              +   E            Y+ I   +       + +GA+    L +  L  +P  RP+
Sbjct: 207 FEANTYQE-----------TYKRISRVEFTFPDFVT-EGARD---LISRLLKHNPSQRPM 251

Query: 429 MSEVVE 434
           + EV+E
Sbjct: 252 LREVLE 257

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 99.5 bits (248), Expect = 2e-22
 Identities = 69/254 (27%), Positives = 91/254 (35%), Gaps = 63/254 (24%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
            +    F    +LG GGFG VF         A     TG   A K LN   L+  K +  
Sbjct: 181 PMGEDWFLDFRVLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQG 231

Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-----RSLPLPW 235
            + E   L  +    +V L  Y  E    L LV   M  G +  H++           P 
Sbjct: 232 AMVEKKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP- 289

Query: 236 SIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
             R       I  G    L  LH+     +IYRD K  N+LLD                 
Sbjct: 290 --RAIFYTAQIVSG----LEHLHQRN---IIYRDLKPENVLLDD---------------- 324

Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DV 349
                    D N ++SD GLA +   G          GT G+ APE ++ G     S D 
Sbjct: 325 ---------DGNVRISDLGLAVELKAGQTK-TKGYA-GTPGFMAPE-LLLGEEYDFSVDY 372

Query: 350 YSFGVVLLEMLTGR 363
           ++ GV L EM+  R
Sbjct: 373 FALGVTLYEMIAAR 386

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 95.3 bits (238), Expect = 3e-22
 Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 48/240 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEV 186
           +F+  +LLG+G F  V++              TGL VA+K ++   +           EV
Sbjct: 12  DFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
                L H ++++L  Y  ED   + LV E    G +  +L  R  P   +         
Sbjct: 63  KIHCQLKHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             G+ +LH      +++RD   SN+LL                           + N K+
Sbjct: 122 ITGMLYLHS---HGILHRDLTLSNLLLTR-------------------------NMNIKI 153

Query: 306 SDFGLA-KDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
           +DFGLA +     +K +      GT  Y +PE    + H    SDV+S G +   +L GR
Sbjct: 154 ADFGLATQLKMPHEKHYTLC---GTPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGR 209

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 99.2 bits (247), Expect = 4e-22
 Identities = 69/278 (24%), Positives = 100/278 (35%), Gaps = 70/278 (25%)

Query: 100 NSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVK 159
            S       + K        T ND       F    ++G GGFG V+            K
Sbjct: 167 ESDKFTRFCQWKNVELNIHLTMND-------FSVHRIIGRGGFGEVY---------GCRK 210

Query: 160 PGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLN---LVKLIGYCIEDDQRL-L 212
             TG   A+K L+   ++  +     L E   L  +   +   +V +  Y      +L  
Sbjct: 211 ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS-YAFHTPDKLSF 269

Query: 213 VYEFMPRGSLENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFK 266
           + + M  G L  HL +           M+     I LG    L  +H      V+YRD K
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEA---DMRFYAAEIILG----LEHMHNRF---VVYRDLK 319

Query: 267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRV 326
            +NILLD                            + ++SD GLA D  +  K H    V
Sbjct: 320 PANILLDE-------------------------HGHVRISDLGLACDFSK-KKPH--ASV 351

Query: 327 MGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
            GT+GY APE +  G     S D +S G +L ++L G 
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 96.4 bits (240), Expect = 4e-22
 Identities = 69/373 (18%), Positives = 129/373 (34%), Gaps = 89/373 (23%)

Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP-GTGLTVAVKTLNHDGLQGHKEW 182
           ++L     R   +L EGGF  V++           +  G+G   A+K L  +  + ++  
Sbjct: 23  VELGELRLRVRRVLAEGGFAFVYE----------AQDVGSGREYALKRLLSNEEEKNRAI 72

Query: 183 LAEVNFLGDLV-HLNLVKLIGYCIEDDQR-------LLVYEFMPRGSLENHLFRRSL--P 232
           + EV F+  L  H N+V+         +         L+   + +G L   L +     P
Sbjct: 73  IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP 132

Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           L     +KI     + +  +H   + P+I+RD K  N+LL                    
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSN------------------ 173

Query: 293 FNNMLFQDYNAKLSDFGLA---KDGPEGDKTHVSTRVM-------GTYGYAAPEYV-MTG 341
                      KL DFG A      P+   +     ++        T  Y  PE + +  
Sbjct: 174 -------QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226

Query: 342 HL--TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL 399
           +     + D+++ G +L  +   +       P  +   +                I   +
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFRQ------HPFEDGAKLR---------------I---V 262

Query: 400 EGHFSI----KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTM 455
            G +SI            L    L  +P+ R  ++EVV  L+ +   +++   S   + +
Sbjct: 263 NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELL 322

Query: 456 -QAERIGSSPNTR 467
            Q    GS+  +R
Sbjct: 323 EQNGGYGSATLSR 335

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 94.6 bits (236), Expect = 7e-22
 Identities = 54/232 (23%), Positives = 83/232 (35%), Gaps = 47/232 (20%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLA-EVNFLGDL 192
            LG+G FG V+            +      +A+K L    L+       L  E+     L
Sbjct: 21  PLGKGKFGNVYLA---------REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71

Query: 193 VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
            H N++++  Y   D +R+ L+ EF PRG L   L ++                A  L +
Sbjct: 72  RHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHY 129

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            HE   R VI+RD K  N+L+                               K++DFG +
Sbjct: 130 CHE---RKVIHRDIKPENLLMGY-------------------------KGELKIADFGWS 161

Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
              P   +        GT  Y  PE +       + D++  GV+  E L G 
Sbjct: 162 VHAP-SLRRRTMC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 93.9 bits (234), Expect = 1e-21
 Identities = 63/321 (19%), Positives = 108/321 (33%), Gaps = 80/321 (24%)

Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEW 182
           +++   +  P   LG G +G V K              +G  +AVK +      Q  K  
Sbjct: 2   MEVKADDLEPIMELGRGAYGVVEKMRHVP---------SGQIMAVKRIRATVNSQEQKRL 52

Query: 183 LAEVNF-LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLFRRSLPLPWSIR 238
           L +++  +  +     V   G    +    +  E M   SL+     +  +   +P  I 
Sbjct: 53  LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDIL 111

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
            KIA+   K L  LH +    VI+RD K SN+L++                         
Sbjct: 112 GKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLIN------------------------- 144

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL----TSRSDVYSFGV 354
                K+ DFG++                G   Y APE +         + +SD++S G+
Sbjct: 145 ALGQVKMCDFGISG---YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 201

Query: 355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID-------PRL-EGHFSIK 406
            ++E+   R                W  P        ++ +        P+L    FS  
Sbjct: 202 TMIELAILR-----------FPYDSWGTP--------FQQLKQVVEEPSPQLPADKFS-- 240

Query: 407 GAQKAAQLAAHCLSRDPKARP 427
              +     + CL ++ K RP
Sbjct: 241 --AEFVDFTSQCLKKNSKERP 259

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 94.2 bits (234), Expect = 3e-21
 Identities = 61/265 (23%), Positives = 101/265 (38%), Gaps = 44/265 (16%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV-H 194
           LG G FG V +           K  T  TVAVK L        H+  ++E+  L  +  H
Sbjct: 30  LGRGAFGQVIEADAFG----IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85

Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFL 252
           LN+V L+G C +    L+V  EF   G+L  +L  +R+  +P+  +          +  +
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYG----------------------KFGFCIYYG 290
             + +R +       S+     V  ++                         + F +  G
Sbjct: 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 205

Query: 291 LFF--------------NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
           + F              N +L +    K+ DFGLA+D  +               + APE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLT 361
            +     T +SDV+SFGV+L E+ +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFS 290

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 92.0 bits (229), Expect = 8e-21
 Identities = 74/340 (21%), Positives = 123/340 (36%), Gaps = 101/340 (29%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFL 189
           F     +G+G FG VFKG         +   T   VA+K ++ +  +   E +  E+  L
Sbjct: 24  FTKLEKIGKGSFGEVFKG---------IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL---GAA 246
                  + K  G  ++D +  ++ E++  GS  + L    L         IA       
Sbjct: 75  SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ-----IATILREIL 129

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           KGL +LH E     I+RD K +N+LL                               KL+
Sbjct: 130 KGLDYLHSEK---KIHRDIKAANVLLSE-------------------------HGEVKLA 161

Query: 307 DFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
           DFG+A     G  T    +    +GT  + APE +      S++D++S G+  +E+  G 
Sbjct: 162 DFGVA-----GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

Query: 364 ---------RSM---DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA 411
                    + +    KN P                         P LEG++S    +  
Sbjct: 217 PPHSELHPMKVLFLIPKNNP-------------------------PTLEGNYS----KPL 247

Query: 412 AQLAAHCLSRDPKARPLMSE------VVEALKPLPNLKDM 445
            +    CL+++P  RP   E      ++   K    L ++
Sbjct: 248 KEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTEL 287

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 92.8 bits (231), Expect = 1e-20
 Identities = 61/268 (22%), Positives = 93/268 (34%), Gaps = 72/268 (26%)

Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPV-KPGTGLTVAVKT 170
           V        F+        F     +G+G FG V            V K  T    A+K 
Sbjct: 5   VFDENEDVNFDH-------FEILRAIGKGSFGKVCI----------VQKNDTKKMYAMKY 47

Query: 171 LNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL 226
           +N        E      E+  +  L H  LV L  Y  +D++ + +V + +  G L  HL
Sbjct: 48  MNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHL 106

Query: 227 FR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY 280
            +           +K     + +     L +L     + +I+RD K  NILLD       
Sbjct: 107 QQNVHFKEE---TVKLFICELVMA----LDYLQN---QRIIHRDMKPDNILLDE------ 150

Query: 281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 339
                                +  ++DF +A   P   +    T + GT  Y APE    
Sbjct: 151 -------------------HGHVHITDFNIAAMLPRETQI---TTMAGTKPYMAPEMFSS 188

Query: 340 ---TGHLTSRSDVYSFGVVLLEMLTGRR 364
               G+ +   D +S GV   E+L GRR
Sbjct: 189 RKGAGY-SFAVDWWSLGVTAYELLRGRR 215

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 91.5 bits (228), Expect = 1e-20
 Identities = 70/274 (25%), Positives = 107/274 (39%), Gaps = 64/274 (23%)

Query: 101 SSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP 160
            S  ++     V     K   +        F    +LG+G FG VF   +++        
Sbjct: 3   GSIKEIAITHHVKEGHEKADPSQ-------FELLKVLGQGSFGKVFL--VKKISG----S 49

Query: 161 GTGLTVAVKTLNHDGLQGHKEW--LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFM 217
                 A+K L    L+         E + L ++ H  +VKL  Y  + + +L L+ +F+
Sbjct: 50  DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFL 108

Query: 218 PRGSLENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNIL 271
             G L   L +           +K     +AL     L  LH      +IYRD K  NIL
Sbjct: 109 RGGDLFTRLSKEVMFTEE---DVKFYLAELALA----LDHLHS---LGIIYRDLKPENIL 158

Query: 272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTY 330
           LD                          + + KL+DFGL+K+  + +K         GT 
Sbjct: 159 LDE-------------------------EGHIKLTDFGLSKESIDHEKK---AYSFCGTV 190

Query: 331 GYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
            Y APE V+     ++S D +SFGV++ EMLTG 
Sbjct: 191 EYMAPE-VVNRRGHTQSADWWSFGVLMFEMLTGT 223

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 91.3 bits (227), Expect = 2e-20
 Identities = 76/338 (22%), Positives = 120/338 (35%), Gaps = 72/338 (21%)

Query: 99  SNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPV 158
           S+ S+ K    L +  +  +   NDL+           +G G  G V+K    +      
Sbjct: 2   SSGSSGKQTGYLTIGGQRYQAEINDLEN-------LGEMGSGTCGQVWKMRFRK------ 48

Query: 159 KPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEF 216
              TG  +AVK +   G  + +K  L +++ +        +V+  G  I +    +  E 
Sbjct: 49  ---TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105

Query: 217 MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
           M     E    R   P+P  I  K+ +   K L +L E+    VI+RD K SNILLD   
Sbjct: 106 M-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDE-- 160

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                                      KL DFG++             R  G   Y APE
Sbjct: 161 -----------------------RGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPE 194

Query: 337 YVMTGHL-----TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPHLGERR 389
            +            R+DV+S G+ L+E+ TG+      + + E    +++   P L    
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG-- 252

Query: 390 RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
                        FS             CL++D + RP
Sbjct: 253 ----------HMGFS----GDFQSFVKDCLTKDHRKRP 276

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 92.5 bits (230), Expect = 2e-20
 Identities = 77/300 (25%), Positives = 114/300 (38%), Gaps = 59/300 (19%)

Query: 72  ESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNF 131
           E  +   T  D       +     +   + ++   E E+ +A    + T N+       F
Sbjct: 98  EWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNE-------F 150

Query: 132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNF 188
               LLG+G FG V             +  TG   A+K L  + +    E    L E   
Sbjct: 151 EYLKLLGKGTFGKVILV---------KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201

Query: 189 LGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMKI-ALGA 245
           L +  H  L  L  Y  +   RL  V E+   G L  HL R R        R +      
Sbjct: 202 LQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED---RARFYGAEI 257

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              L +LH  +E+ V+YRD K  N++LD                          D + K+
Sbjct: 258 VSALDYLH--SEKNVVYRDLKLENLMLDK-------------------------DGHIKI 290

Query: 306 SDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           +DFGL K+G +   T    +   GT  Y APE V+  +   R+ D +  GVV+ EM+ GR
Sbjct: 291 TDFGLCKEGIKDGAT---MKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 91.2 bits (227), Expect = 3e-20
 Identities = 78/378 (20%), Positives = 121/378 (32%), Gaps = 92/378 (24%)

Query: 70  HYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATR 129
            +      +       AA  S+      E   +         +     K    +      
Sbjct: 2   AHHHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIEN------ 55

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW----LAE 185
            F    +LG G +G VF   + +         TG   A+K L    +    +       E
Sbjct: 56  -FELLKVLGTGAYGKVFL--VRKISG----HDTGKLYAMKVLKKATIVQKAKTTEHTRTE 108

Query: 186 VNFLGDLVHLN-LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMK-- 240
              L  +     LV L  Y  + + +L L+ +++  G L  HL +           ++  
Sbjct: 109 RQVLEHIRQSPFLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFTEH---EVQIY 164

Query: 241 ---IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
              I L     L  LH+     +IYRD K  NILLD+                       
Sbjct: 165 VGEIVLA----LEHLHK---LGIIYRDIKLENILLDS----------------------- 194

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGV 354
             + +  L+DFGL+K+    +         GT  Y AP+ V    +GH  +  D +S GV
Sbjct: 195 --NGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDSGHDKA-VDWWSLGV 250

Query: 355 VLLEMLTGR---RSMDKNRPNGEHNLVEWARPHLGERRRFYRLI---DPRLEGHFSIKGA 408
           ++ E+LTG        +     E                  R I   +P      S    
Sbjct: 251 LMYELLTGASPFTVDGEKNSQAE----------------ISRRILKSEPPYPQEMS---- 290

Query: 409 QKAAQLAAHCLSRDPKAR 426
             A  L    L +DPK R
Sbjct: 291 ALAKDLIQRLLMKDPKKR 308

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 88.4 bits (220), Expect = 1e-19
 Identities = 55/280 (19%), Positives = 97/280 (34%), Gaps = 64/280 (22%)

Query: 95  SNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENG 154
             A      +   +  +   + RK    D       F+   +LGEG F  V         
Sbjct: 3   GTAAEPRPGAGSLQHAQPPPQPRKKRPED-------FKFGKILGEGSFSTVVLA------ 49

Query: 155 TAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIGYCIEDDQRL 211
               +  T    A+K L    +    +      E + +  L H   VKL  +  +DD++L
Sbjct: 50  ---RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKL 105

Query: 212 -LVYEFMPRGSLENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRD 264
                +   G L  ++ +  S         +     I       L +LH    + +I+RD
Sbjct: 106 YFGLSYAKNGELLKYIRKIGSFDET---CTRFYTAEIVSA----LEYLHG---KGIIHRD 155

Query: 265 FKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVST 324
            K  NILL+                          D + +++DFG AK      K   + 
Sbjct: 156 LKPENILLNE-------------------------DMHIQITDFGTAKVLSPESKQARAN 190

Query: 325 RVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR 363
             +GT  Y +PE +         SD+++ G ++ +++ G 
Sbjct: 191 SFVGTAQYVSPELLTEKSA-CKSSDLWALGCIIYQLVAGL 229

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 88.4 bits (220), Expect = 2e-19
 Identities = 84/318 (26%), Positives = 116/318 (36%), Gaps = 87/318 (27%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V             +  TG   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILV---------REKATGRYYAMKILRKEVIIAKDEVAH 51

Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRM 239
            + E   L +  H  L  L  Y  +   RL  V E+   G L  HL R R        R 
Sbjct: 52  TVTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE---RA 107

Query: 240 K-----IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
           +     I       L +LH    R V+YRD K  N++LD                     
Sbjct: 108 RFYGAEIVSA----LEYLHS---RDVVYRDIKLENLMLDK-------------------- 140

Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS-DVYSF 352
                D + K++DFGL K+G     T    +   GT  Y APE V+  +   R+ D +  
Sbjct: 141 -----DGHIKITDFGLCKEGISDGAT---MKTFCGTPEYLAPE-VLEDNDYGRAVDWWGL 191

Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGE-RRRFYRLI---DPRLEGHFSIKGA 408
           GVV+ EM+ G       R            P   +   R + LI   + R     S    
Sbjct: 192 GVVMYEMMCG-------RL-----------PFYNQDHERLFELILMEEIRFPRTLS---- 229

Query: 409 QKAAQLAAHCLSRDPKAR 426
            +A  L A  L +DPK R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 70/326 (21%), Positives = 105/326 (32%), Gaps = 84/326 (25%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKE 181
                  + +    +G G +G V K   +          +G  +AVK +      +  K+
Sbjct: 16  HWDFTAEDLKDLGEIGRGAYGSVNKMVHKP---------SGQIMAVKRIRSTVDEKEQKQ 66

Query: 182 WLAEVNF-LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL----FRRSLPLPWS 236
            L +++  +       +V+  G    +    +  E M   S +             +P  
Sbjct: 67  LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEE 125

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
           I  KI L   K L  L E     +I+RD K SNILLD                       
Sbjct: 126 ILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDR---------------------- 161

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL----TSRSDVYSF 352
                N KL DFG++    +   +   TR  G   Y APE +           RSDV+S 
Sbjct: 162 ---SGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215

Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID-------PRL----EG 401
           G+ L E+ TGR    K                       +  +        P+L    E 
Sbjct: 216 GITLYELATGRFPYPKWNS-------------------VFDQLTQVVKGDPPQLSNSEER 256

Query: 402 HFSIKGAQKAAQLAAHCLSRDPKARP 427
            FS             CL++D   RP
Sbjct: 257 EFS----PSFINFVNLCLTKDESKRP 278

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 89.4 bits (222), Expect = 2e-19
 Identities = 59/282 (20%), Positives = 97/282 (34%), Gaps = 63/282 (22%)

Query: 102 STSKLEEELKVASRLRKF-----TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTA 156
             S+L ++  VA  L+          +++L   +F    ++G G F  V           
Sbjct: 29  GASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAV--------- 79

Query: 157 PV-KPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL- 211
            V    TG   A+K +N   +    E   +  E + L +     + +L  +  +D+  L 
Sbjct: 80  -VKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH-FAFQDENYLY 137

Query: 212 LVYEFMPRGSLENHLFR--RSLPLPWSIRMKIA-LGAAKGLAFLHEEAERPVIYRDFKTS 268
           LV E+   G L   L +    +P   + R  +A +  A  +  +H       ++RD K  
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMA-RFYLAEIVMA--IDSVHR---LGYVHRDIKPD 191

Query: 269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMG 328
           NILLD          G                   +L+DFG                V G
Sbjct: 192 NILLDR--------CGHI-----------------RLADFGSCLKLRADGTVRSLVAV-G 225

Query: 329 TYGYAAPEYVMTGHLTSRSDVY-------SFGVVLLEMLTGR 363
           T  Y +PE +        +  Y       + GV   EM  G+
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 87.4 bits (217), Expect = 3e-19
 Identities = 69/308 (22%), Positives = 113/308 (36%), Gaps = 72/308 (23%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
            + +     +G+G  G V+           +   TG  VA++ +N       +  + E+ 
Sbjct: 19  KKKYTRFEKIGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEIL 69

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            + +  + N+V  +   +  D+  +V E++  GSL + +    +     I   +     +
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ-I-AAVCRECLQ 127

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
            L FLH      VI+RD K+ NILL                           D + KL+D
Sbjct: 128 ALEFLHSNQ---VIHRDIKSDNILLGM-------------------------DGSVKLTD 159

Query: 308 FGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           FG  A+  PE  K    T V GT  + APE V       + D++S G++ +EM+ G    
Sbjct: 160 FGFCAQITPEQSKRS--TMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG---- 212

Query: 367 DKNRPNGEHNLVEWARPHLGER--RRFYRLID---PRLEG--HFSIKGAQKAAQLAAHCL 419
               P           P+L E   R  Y +     P L+     S             CL
Sbjct: 213 ---EP-----------PYLNENPLRALYLIATNGTPELQNPEKLS----AIFRDFLNRCL 254

Query: 420 SRDPKARP 427
             D + R 
Sbjct: 255 EMDVEKRG 262

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 87.2 bits (216), Expect = 5e-19
 Identities = 52/331 (15%), Positives = 103/331 (31%), Gaps = 71/331 (21%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
             +   R  +  + L   G    F  W+E       +    + +  ++ +          
Sbjct: 47  AREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMD 106

Query: 183 LA--EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLP------ 234
               ++  +      N V  +          +  +   + +L++ + RR           
Sbjct: 107 APSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166

Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
             I ++IA      + FLH    + +++RD K SNI                        
Sbjct: 167 LHIFIQIAEA----VEFLHS---KGLMHRDLKPSNIFFT--------------------- 198

Query: 295 NMLFQDYNAKLSDFGLAKD----------GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT 344
                D   K+ DFGL                       T  +GT  Y +PE +   + +
Sbjct: 199 ----MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYS 254

Query: 345 SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI-DPRLEGHF 403
            + D++S G++L E+L    +                     ER R    + + +    F
Sbjct: 255 HKVDIFSLGLILFELLYSFSTQM-------------------ERVRIITDVRNLKFPLLF 295

Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
           + K   +   +    LS  P  RP  ++++E
Sbjct: 296 TQK-YPQEHMMVQDMLSPSPTERPEATDIIE 325

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 87.2 bits (217), Expect = 5e-19
 Identities = 66/270 (24%), Positives = 101/270 (37%), Gaps = 66/270 (24%)

Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
             E  V     K            F    +LG+GG+G VF+  + +         TG   
Sbjct: 2   SSETSVNRGPEKIRPEC-------FELLRVLGKGGYGKVFQ--VRKVTG----ANTGKIF 48

Query: 167 AVKTLNHDGLQGHK---EW-LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGS 221
           A+K L    +  +        AE N L ++ H  +V LI Y  +   +L L+ E++  G 
Sbjct: 49  AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGE 107

Query: 222 LENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV 275
           L   L R                  I++     L  LH++    +IYRD K  NI+L+  
Sbjct: 108 LFMQLEREGIFMED---TACFYLAEISMA----LGHLHQKG---IIYRDLKPENIMLNH- 156

Query: 276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAA 334
                                     + KL+DFGL K+          T    GT  Y A
Sbjct: 157 ------------------------QGHVKLTDFGLCKESIHDGTV---THTFCGTIEYMA 189

Query: 335 PEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           PE ++     +R+ D +S G ++ +MLTG 
Sbjct: 190 PE-ILMRSGHNRAVDWWSLGALMYDMLTGA 218

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 86.3 bits (214), Expect = 8e-19
 Identities = 74/347 (21%), Positives = 126/347 (36%), Gaps = 79/347 (22%)

Query: 96  NAESNSSTSKLEEELKVASRLRKFTFND-LKLATRNFRPESL------LGEGGFGCVFKG 148
           +  S+      E     +  +    F   L++      P  L      +GEG  G V   
Sbjct: 5   HHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLA 64

Query: 149 WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD 208
                     +  +G  VAVK ++    Q  +    EV  + D  H N+V++    +  +
Sbjct: 65  ---------REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE 115

Query: 209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS 268
           +  ++ EF+  G+L + +    + L       +     + LA+LH +    VI+RD K+ 
Sbjct: 116 ELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSD 170

Query: 269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGPEGDKTHVSTRVM 327
           +ILL                           D   KLSDFG  A+   +  K    + V 
Sbjct: 171 SILLTL-------------------------DGRVKLSDFGFCAQISKDVPKRK--SLV- 202

Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGE 387
           GT  + APE +      +  D++S G++++EM+ G        P           P+  +
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG-------EP-----------PYFSD 244

Query: 388 R--RRFYRLID---PRLEG--HFSIKGAQKAAQLAAHCLSRDPKARP 427
              +   RL D   P+L+     S              L RDP+ R 
Sbjct: 245 SPVQAMKRLRDSPPPKLKNSHKVS----PVLRDFLERMLVRDPQERA 287

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 87.8 bits (218), Expect = 9e-19
 Identities = 66/311 (21%), Positives = 110/311 (35%), Gaps = 81/311 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           LG G +G V                T +  A+K +    +    + + L EV  L  L H
Sbjct: 45  LGSGAYGEVLLC---------RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAAKG 248
            N++KL  +  ED +   LV E    G L + +  R     ++       +K  L     
Sbjct: 96  PNIMKLYDFF-EDKRNYYLVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSG--- 148

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH+     +++RD K  N+LL++                        +D   K+ DF
Sbjct: 149 VTYLHK---HNIVHRDLKPENLLLESKE----------------------KDALIKIVDF 183

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           GL+       K       +GT  Y APE V+      + DV+S GV+L  +L G      
Sbjct: 184 GLSAVFENQKKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGY----- 234

Query: 369 NRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------QKAAQLAAHCLSR 421
             P  G+ +            +   R +    +G ++          + A  L    L  
Sbjct: 235 -PPFGGQTD------------QEILRKV---EKGKYTFDSPEWKNVSEGAKDLIKQMLQF 278

Query: 422 DPKARPLMSEV 432
           D + R    + 
Sbjct: 279 DSQRRISAQQA 289

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 87.8 bits (218), Expect = 1e-18
 Identities = 68/312 (21%), Positives = 112/312 (35%), Gaps = 82/312 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
           LG+G FG V                TG   AVK ++   ++   +    L EV  L  L 
Sbjct: 34  LGKGSFGEVILC---------KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAAK 247
           H N++KL  +  ED     LV E    G L + +  R     +S       ++  L    
Sbjct: 85  HPNIMKLYEFF-EDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSG-- 138

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
            + ++H+     +++RD K  N+LL++                        +D N ++ D
Sbjct: 139 -ITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRIID 172

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FGL+       K       +GT  Y APE V+ G    + DV+S GV+L  +L+G     
Sbjct: 173 FGLSTHFEASKKMK---DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGC---- 224

Query: 368 KNRPNGEHNLVEWARPHLGE-RRRFYRLIDPRLEGHFSIKGA------QKAAQLAAHCLS 420
                          P  G       + +    +G ++ +        + A  L    L+
Sbjct: 225 --------------PPFNGANEYDILKKV---EKGKYTFELPQWKKVSESAKDLIRKMLT 267

Query: 421 RDPKARPLMSEV 432
             P  R    + 
Sbjct: 268 YVPSMRISARDA 279

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 87.8 bits (218), Expect = 1e-18
 Identities = 66/322 (20%), Positives = 109/322 (33%), Gaps = 92/322 (28%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN------------HDGLQGHKEWLA 184
           LG G +G V             +       A+K +             +  ++   E + 
Sbjct: 44  LGSGAYGEVLLC---------KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 185 -EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR---- 238
            E++ L  L H N++KL     ED +   LV EF   G L   +  R     +       
Sbjct: 95  NEISLLKSLDHPNIIKLFDVF-EDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAAN 150

Query: 239 -MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
            MK  L     + +LH   +  +++RD K  NILL+                        
Sbjct: 151 IMKQILSG---ICYLH---KHNIVHRDIKPENILLENKN--------------------- 183

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
               N K+ DFGL+    +  K       +GT  Y APE V+      + DV+S GV++ 
Sbjct: 184 -SLLNIKIVDFGLSSFFSKDYKLR---DRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMY 238

Query: 358 EMLTGRRSMDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------QK 410
            +L G        P  G+++            +   + +    +G +            +
Sbjct: 239 ILLCGY------PPFGGQND------------QDIIKKV---EKGKYYFDFNDWKNISDE 277

Query: 411 AAQLAAHCLSRDPKARPLMSEV 432
           A +L    L+ D   R    E 
Sbjct: 278 AKELIKLMLTYDYNKRCTAEEA 299

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 63/314 (20%), Positives = 110/314 (35%), Gaps = 83/314 (26%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
           +     LG+G FG V+K              TG   A K +     +  ++++ E+  L 
Sbjct: 21  WEIVGELGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILA 71

Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
              H  +VKL+G    D +  ++ EF P G+++  +      L       +     + L 
Sbjct: 72  TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           FLH +    +I+RD K  N+L+                           + + +L+DFG+
Sbjct: 132 FLHSKR---IIHRDLKAGNVLMTL-------------------------EGDIRLADFGV 163

Query: 311 AKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLT-----SRSDVYSFGVVLLEMLTG 362
           +             +    +GT  + APE VM   +       ++D++S G+ L+EM   
Sbjct: 164 S-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI 218

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGE---RRRFYRLID----PRLE--GHFSIKGAQKAAQ 413
                   P           PH      R      I     P L     +S     +   
Sbjct: 219 -------EP-----------PHHELNPMRVLL--KIAKSDPPTLLTPSKWS----VEFRD 254

Query: 414 LAAHCLSRDPKARP 427
                L ++P+ RP
Sbjct: 255 FLKIALDKNPETRP 268

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 68/309 (22%), Positives = 113/309 (36%), Gaps = 74/309 (23%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
              F     LGEG +G V+K   +E         TG  VA+K +  +     +E + E++
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKE---------TGQIVAIKQVPVE--SDLQEIIKEIS 76

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            +      ++VK  G   ++    +V E+   GS+ + +  R+  L       I     K
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK 136

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL +LH       I+RD K  NILL+                          + +AKL+D
Sbjct: 137 GLEYLHFMR---KIHRDIKAGNILLNT-------------------------EGHAKLAD 168

Query: 308 FGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           FG+  +      K +    V+GT  + APE +        +D++S G+  +EM  G    
Sbjct: 169 FGVAGQLTDTMAKRNT---VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG---- 221

Query: 367 DKNRPNGEHNLVEWARPHLGER--RRFYRLID----PRLEG--HFSIKGAQKAAQLAAHC 418
              +P           P+      R  + +I     P       +S             C
Sbjct: 222 ---KP-----------PYADIHPMRAIF-MIPTNPPPTFRKPELWS----DNFTDFVKQC 262

Query: 419 LSRDPKARP 427
           L + P+ R 
Sbjct: 263 LVKSPEQRA 271

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 85.5 bits (212), Expect = 3e-18
 Identities = 84/368 (22%), Positives = 131/368 (35%), Gaps = 85/368 (23%)

Query: 79  TSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLG 138
           +             TT N     +     EE K A   R+       L  ++F    ++G
Sbjct: 2   SYYHHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIG 61

Query: 139 EGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV-H 194
            G +  V                T    A++ +  + +   ++      E +       H
Sbjct: 62  RGSYAKVLLV---------RLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMK-----IALGAAK 247
             LV L   C + + RL  V E++  G L  H+ R R LP       +     I+L    
Sbjct: 113 PFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE---HARFYSAEISLA--- 165

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
            L +LHE   R +IYRD K  N+LLD+         G                   KL+D
Sbjct: 166 -LNYLHE---RGIIYRDLKLDNVLLDS--------EGHI-----------------KLTD 196

Query: 308 FGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR-- 363
           +G+ K+G     T   T    GT  Y APE ++ G     S D ++ GV++ EM+ GR  
Sbjct: 197 YGMCKEGLRPGDT---TSTFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGRSP 252

Query: 364 --RSMDKNRPNGEHNLVEWARPHLGERRRFYRLI---DPRLEGHFSIKGAQKAAQLAAHC 418
                  + P+                   +++I     R+    S     KAA +    
Sbjct: 253 FDIVGSSDNPDQN------------TEDYLFQVILEKQIRIPRSLS----VKAASVLKSF 296

Query: 419 LSRDPKAR 426
           L++DPK R
Sbjct: 297 LNKDPKER 304

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 85.6 bits (212), Expect = 4e-18
 Identities = 64/281 (22%), Positives = 95/281 (33%), Gaps = 61/281 (21%)

Query: 101 SSTSKLEEELKVASRLRKF-----TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGT 155
            + S L  E  +   L            ++L   +F    ++G G FG V          
Sbjct: 41  CNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAV-------- 92

Query: 156 APV-KPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL 211
             V         A+K LN   +    E   +  E + L +     +  L  Y  +DD  L
Sbjct: 93  --VKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH-YAFQDDNNL 149

Query: 212 -LVYEFMPRGSLENHL--FRRSLPLPWSIRMKIA-LGAAKGLAFLHEEAERPVIYRDFKT 267
            LV ++   G L   L  F   LP   + R  +A +  A  +  +H+      ++RD K 
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMA-RFYLAEMVIA--IDSVHQ---LHYVHRDIKP 203

Query: 268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM 327
            NIL+D          G                   +L+DFG      E      S  V 
Sbjct: 204 DNILMDM--------NGHI-----------------RLADFGSCLKLMEDGTVQSSVAV- 237

Query: 328 GTYGYAAPEYVMTGHLTSRS-----DVYSFGVVLLEMLTGR 363
           GT  Y +PE +              D +S GV + EML G 
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 85.1 bits (211), Expect = 5e-18
 Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 58/277 (20%)

Query: 102 STSKLEEELKVASRLRKF-----TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTA 156
               L +   + + L ++        DL++   ++    ++G G FG V           
Sbjct: 37  DFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQL--------- 87

Query: 157 PVKP-GTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL- 211
            V+   T    A+K L+   +    +   +  E + +       +V+L  Y  +DD+ L 
Sbjct: 88  -VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLY 145

Query: 212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIA-LGAAKGLAFLHEEAERPVIYRDFKTSNI 270
           +V E+MP G L N +    +P  W+ R   A +  A  L  +H       I+RD K  N+
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWA-RFYTAEVVLA--LDAIHS---MGFIHRDVKPDNM 199

Query: 271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 330
           LLD        K G                   KL+DFG      +       T V GT 
Sbjct: 200 LLD--------KSGHL-----------------KLADFGTCMKMNKEGMVRCDTAV-GTP 233

Query: 331 GYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTGR 363
            Y +PE + +    G+     D +S GV L EML G 
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 83.4 bits (207), Expect = 6e-18
 Identities = 58/236 (24%), Positives = 90/236 (38%), Gaps = 55/236 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           +GEG +G VFK    +         TG  VA+K                  L E+  L  
Sbjct: 11  IGEGSYGVVFKCRNRD---------TGQIVAIKKFL---ESEDDPVIKKIALREIRMLKQ 58

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L H NLV L+       +  LV+E+    ++ + L R    +P  +   I     + + F
Sbjct: 59  LKHPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H   +   I+RD K  NIL+                     ++++      KL DFG A
Sbjct: 118 CH---KHNCIHRDVKPENILITK-------------------HSVI------KLCDFGFA 149

Query: 312 KD--GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           +   GP       V+TR      Y +PE ++         DV++ G V  E+L+G 
Sbjct: 150 RLLTGPSDYYDDEVATR-----WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 84.0 bits (208), Expect = 7e-18
 Identities = 82/376 (21%), Positives = 129/376 (34%), Gaps = 97/376 (25%)

Query: 97  AESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESL------LGEGGFGCVFKGWI 150
              N       + +    R       D+        PE L      +G G FG V+    
Sbjct: 16  TTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFA-- 73

Query: 151 EENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIGYCIED 207
                          VA+K +++ G Q +++W   + EV FL  L H N ++  G  + +
Sbjct: 74  -------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 126

Query: 208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT 267
               LV E+   GS  + L     PL       +  GA +GLA+LH      +I+RD K 
Sbjct: 127 HTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKA 182

Query: 268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR-- 325
            NILL                          +    KL DFG A        + ++    
Sbjct: 183 GNILLS-------------------------EPGLVKLGDFGSA--------SIMAPANS 209

Query: 326 VMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 382
            +GT  + APE ++    G    + DV+S G+  +E+          +P           
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-------KP----------- 251

Query: 383 PHLGE---RRRFYRLID----PRLE-GHFSIKGAQKAAQLAAHCLSRDPKARP-----LM 429
           P          +   I     P L+ GH+S    +        CL + P+ RP     L 
Sbjct: 252 PLFNMNAMSALY--HIAQNESPALQSGHWS----EYFRNFVDSCLQKIPQDRPTSEVLLK 305

Query: 430 SEVVEALKPLPNLKDM 445
              V   +P   + D+
Sbjct: 306 HRFVLRERPPTVIMDL 321

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 84.7 bits (210), Expect = 9e-18
 Identities = 68/313 (21%), Positives = 109/313 (34%), Gaps = 85/313 (27%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           LG+G FG V K              T    AVK +N    +       L EV  L  L H
Sbjct: 30  LGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAAKG 248
            N++KL     ED     +V E    G L + + +R     +S       +K        
Sbjct: 81  PNIMKLFEIL-EDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSG--- 133

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA--KLS 306
           + ++H+     +++RD K  NILL++                        ++ +   K+ 
Sbjct: 134 ITYMHK---HNIVHRDLKPENILLES------------------------KEKDCDIKII 166

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           DFGL+    +  K       +GT  Y APE V+ G    + DV+S GV+L  +L+G    
Sbjct: 167 DFGLSTCFQQNTKMK---DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGT--- 219

Query: 367 DKNRPNGEHNLVEWARPHLGE-RRRFYRLIDPRLEGHFSIKGA------QKAAQLAAHCL 419
                           P  G+      + +     G ++            A  L    L
Sbjct: 220 ---------------PPFYGKNEYDILKRV---ETGKYAFDLPQWRTISDDAKDLIRKML 261

Query: 420 SRDPKARPLMSEV 432
           +  P  R   ++ 
Sbjct: 262 TFHPSLRITATQC 274

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 83.1 bits (206), Expect = 9e-18
 Identities = 67/320 (20%), Positives = 113/320 (35%), Gaps = 77/320 (24%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
           ++  + ++G G    V                    VA+K +N +  Q   + L  E+  
Sbjct: 16  DYELQEVIGSGATAVVQAA---------YCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 66

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK-----IAL 243
           +    H N+V      +  D+  LV + +  GS+   + +  +              IA 
Sbjct: 67  MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV-LDIIKHIVAKGEHKSGVLDESTIAT 125

Query: 244 ---GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 +GL +LH+      I+RD K  NILL                          +D
Sbjct: 126 ILREVLEGLEYLHKNG---QIHRDVKAGNILLG-------------------------ED 157

Query: 301 YNAKLSDFGL-AKDGPEGDKTHVSTR--VMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVL 356
            + +++DFG+ A     GD T    R   +GT  + APE +        ++D++SFG+  
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI----DPRLEGHFSIKGAQKA- 411
           +E+ TG     K  P                  +   L      P LE     K   K  
Sbjct: 218 IELATGAAPYHKYPPM-----------------KVLMLTLQNDPPSLETGVQDKEMLKKY 260

Query: 412 ----AQLAAHCLSRDPKARP 427
                ++ + CL +DP+ RP
Sbjct: 261 GKSFRKMISLCLQKDPEKRP 280

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 83.4 bits (207), Expect = 1e-17
 Identities = 67/274 (24%), Positives = 100/274 (36%), Gaps = 69/274 (25%)

Query: 103 TSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGT 162
           T+    +        +    D       F    +LG+G FG V             + GT
Sbjct: 1   TTNTVSKFDNNGNRDRMKLTD-------FNFLMVLGKGSFGKVMLS---------ERKGT 44

Query: 163 GLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV-HLNLVKLIGYCIEDDQRL-LVYEFM 217
               AVK L  D +    +    + E   L        L +L   C +   RL  V E++
Sbjct: 45  DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH-SCFQTMDRLYFVMEYV 103

Query: 218 PRGSLENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNIL 271
             G L  H+ +      P           IA+G    L FL     + +IYRD K  N++
Sbjct: 104 NGGDLMYHIQQVGRFKEP---HAVFYAAEIAIG----LFFLQS---KGIIYRDLKLDNVM 153

Query: 272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTY 330
           LD+         G                   K++DFG+ K+      T   T+   GT 
Sbjct: 154 LDSE--------GHI-----------------KIADFGMCKENIWDGVT---TKTFCGTP 185

Query: 331 GYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
            Y APE ++      +S D ++FGV+L EML G+
Sbjct: 186 DYIAPE-IIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 83.8 bits (208), Expect = 1e-17
 Identities = 74/287 (25%), Positives = 102/287 (35%), Gaps = 69/287 (24%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGW 149
                 NA      +  ++     S       +D       F    ++G+G FG V    
Sbjct: 6   QEPELMNANPAPPPAPSQQINLGPSSNPHAKPSD-------FHFLKVIGKGSFGKVLLA- 57

Query: 150 IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV-HLNLVKLIGYCI 205
                         +  AVK L    +   KE    ++E N L   V H  LV L  +  
Sbjct: 58  --------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH-FSF 108

Query: 206 EDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAER 258
           +   +L  V +++  G L  HL R R    P   R +     IA      L +LH     
Sbjct: 109 QTADKLYFVLDYINGGELFYHLQRERCFLEP---RARFYAAEIASA----LGYLHS---L 158

Query: 259 PVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD 318
            ++YRD K  NILLD+         G                    L+DFGL K+  E +
Sbjct: 159 NIVYRDLKPENILLDS--------QGHI-----------------VLTDFGLCKENIEHN 193

Query: 319 KTHVSTRVM-GTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
            T   T    GT  Y APE V+      R+ D +  G VL EML G 
Sbjct: 194 ST---TSTFCGTPEYLAPE-VLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 83.0 bits (206), Expect = 1e-17
 Identities = 72/270 (26%), Positives = 98/270 (36%), Gaps = 69/270 (25%)

Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
           E   +  S   K    D       F    +LG+G FG VF               T    
Sbjct: 2   ELNKERPSLQIKLKIED-------FILHKMLGKGSFGKVFLA---------EFKKTNQFF 45

Query: 167 AVKTLNHDGLQGHKEW---LAEVNFLGDLV-HLNLVKLIGYCIEDDQRL-LVYEFMPRGS 221
           A+K L  D +    +    + E   L     H  L  +     +  + L  V E++  G 
Sbjct: 46  AIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGD 104

Query: 222 LENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV 275
           L  H+       L    R       I LG    L FLH    + ++YRD K  NILLD  
Sbjct: 105 LMYHIQSCHKFDLS---RATFYAAEIILG----LQFLHS---KGIVYRDLKLDNILLDK- 153

Query: 276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAA 334
                   G                   K++DFG+ K+   GD     T    GT  Y A
Sbjct: 154 -------DGHI-----------------KIADFGMCKENMLGDAK---TNTFCGTPDYIA 186

Query: 335 PEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           PE ++ G   + S D +SFGV+L EML G+
Sbjct: 187 PE-ILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 84.7 bits (209), Expect = 2e-17
 Identities = 72/306 (23%), Positives = 110/306 (35%), Gaps = 55/306 (17%)

Query: 68  STHYESKSTNDTSRDQPAAAVI-SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKL 126
            +  E +  N     + +            A+    T   EE+            N  ++
Sbjct: 279 LSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRM 338

Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---L 183
              +F    +LG+G FG V             + GT    AVK L  D +    +    +
Sbjct: 339 KLTDFNFLMVLGKGSFGKVMLS---------ERKGTDELYAVKILKKDVVIQDDDVECTM 389

Query: 184 AEVNFLGDLV-HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRMK 240
            E   L        L +L   C +   RL  V E++  G L  H+ +      P      
Sbjct: 390 VEKRVLALPGKPPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP---HAV 445

Query: 241 I-ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
             A   A GL FL     + +IYRD K  N++LD+         G               
Sbjct: 446 FYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSE--------GHI------------- 481

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS-DVYSFGVVLL 357
               K++DFG+ K+      T   T+   GT  Y APE ++      +S D ++FGV+L 
Sbjct: 482 ----KIADFGMCKENIWDGVT---TKTFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLY 533

Query: 358 EMLTGR 363
           EML G+
Sbjct: 534 EMLAGQ 539

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 81.9 bits (203), Expect = 3e-17
 Identities = 78/320 (24%), Positives = 122/320 (38%), Gaps = 81/320 (25%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
            L  ++F    ++G G +  V                T    A+K +  + +   ++   
Sbjct: 5   PLGLQDFDLLRVIGRGSYAKVLLV---------RLKKTDRIYAMKVVKKELVNDDEDIDW 55

Query: 183 -LAEVNFLGDLV-HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIR 238
              E +       H  LV L   C + + RL  V E++  G L  H+ R R LP   + R
Sbjct: 56  VQTEKHVFEQASNHPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-R 113

Query: 239 M---KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
               +I+L     L +LHE   R +IYRD K  N+LLD+         G           
Sbjct: 114 FYSAEISLA----LNYLHE---RGIIYRDLKLDNVLLDS--------EGHI--------- 149

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS-DVYSFG 353
                   KL+D+G+ K+G     T   T    GT  Y APE ++ G     S D ++ G
Sbjct: 150 --------KLTDYGMCKEGLRPGDT---TSTFCGTPNYIAPE-ILRGEDYGFSVDWWALG 197

Query: 354 VVLLEMLTGR----RSMDKNRPNGEHNLVEWARPHLGERRRFYRLI---DPRLEGHFSIK 406
           V++ EM+ GR         + P+                   +++I     R+    S  
Sbjct: 198 VLMFEMMAGRSPFDIVGSSDNPDQN------------TEDYLFQVILEKQIRIPRSLS-- 243

Query: 407 GAQKAAQLAAHCLSRDPKAR 426
              KAA +    L++DPK R
Sbjct: 244 --VKAASVLKSFLNKDPKER 261

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 82.8 bits (205), Expect = 3e-17
 Identities = 62/280 (22%), Positives = 97/280 (34%), Gaps = 81/280 (28%)

Query: 114 SRLRKFTFNDLKLATRNFRPESL---------LGEGGFGCVFKGWIEENGTAPVKPGTGL 164
           SR + F F DL +  ++  P++L         LG G  G V             +  T  
Sbjct: 111 SRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLA---------FERKTCK 161

Query: 165 TVAVKTLNHDGLQGHKEWLA--------EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEF 216
            VA++ ++           A        E+  L  L H  ++K+  +  + +   +V E 
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 220

Query: 217 MPRGSLENHLFRRSLPLPWSIRMKIALG---AAK-------GLAFLHEEAERPVIYRDFK 266
           M  G  E  LF +       +     L               + +LHE     +I+RD K
Sbjct: 221 MEGG--E--LFDK-------VVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLK 266

Query: 267 TSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRV 326
             N+LL +                        +D   K++DFG +K   E       T  
Sbjct: 267 PENVLLSSQE----------------------EDCLIKITDFGHSKILGETSLM--RTLC 302

Query: 327 MGTYGYAAPEYVMTGHL----TSRSDVYSFGVVLLEMLTG 362
            GT  Y APE V+            D +S GV+L   L+G
Sbjct: 303 -GTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 340

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 80.8 bits (200), Expect = 6e-17
 Identities = 73/325 (22%), Positives = 113/325 (34%), Gaps = 71/325 (21%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV 193
           E +LGEG    V            +   T    AVK +             EV  L    
Sbjct: 18  EDVLGEGAHARVQTC---------INLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68

Query: 194 -HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAA 246
            H N+++LI +  E++ R  LV+E M  GS+ +H+ +R     ++       ++    A 
Sbjct: 69  GHRNVLELIEF-FEEEDRFYLVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASA- 123

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
             L FLH    + + +RD K  NIL +                         Q    K+ 
Sbjct: 124 --LDFLH---NKGIAHRDLKPENILCEHPN----------------------QVSPVKIC 156

Query: 307 DFGLAKD-GPEGDKTHVSTRVM----GTYGYAAPEYVMTGHLTSRS-----DVYSFGVVL 356
           DF L       GD + +ST  +    G+  Y APE V      +       D++S GV+L
Sbjct: 157 DFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

Query: 357 LEMLTGRRSMDKNRP-NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------Q 409
             +L+G        P  G                    L +   EG +            
Sbjct: 217 YILLSGY------PPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISC 270

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVE 434
            A  L +  L RD K R   ++V++
Sbjct: 271 AAKDLISKLLVRDAKQRLSAAQVLQ 295

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 80.7 bits (200), Expect = 6e-17
 Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 55/243 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LA 184
            +    L+GEG +G V K   ++         TG  VA+K           +      + 
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKD---------TGRIVAIKKFL---ESDDDKMVKKIAMR 73

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           E+  L  L H NLV L+  C +  +  LV+EF+   ++ + L      L + +  K    
Sbjct: 74  EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQ 132

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
              G+ F H      +I+RD K  NIL+                     + ++      K
Sbjct: 133 IINGIGFCH---SHNIIHRDIKPENILVSQ-------------------SGVV------K 164

Query: 305 LSDFGLAKD--GPEGDKTH-VSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
           L DFG A+    P       V+TR      Y APE ++         DV++ G ++ EM 
Sbjct: 165 LCDFGFARTLAAPGEVYDDEVATR-----WYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219

Query: 361 TGR 363
            G 
Sbjct: 220 MGE 222

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 81.5 bits (201), Expect = 7e-17
 Identities = 56/335 (16%), Positives = 91/335 (27%), Gaps = 89/335 (26%)

Query: 138 GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHL 195
           G      V                TG  V V+ +N +            E++      H 
Sbjct: 36  GFEDLMTVNLA---------RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86

Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL---GAAKGLAFL 252
           N+V      I D++  +V  FM  GS +  L         +  + IA    G  K L ++
Sbjct: 87  NIVPYRATFIADNELWVVTSFMAYGSAK-DLICTHFMDGMN-ELAIAYILQGVLKALDYI 144

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG-LA 311
           H       ++R  K S+IL+                           D    LS      
Sbjct: 145 HHMG---YVHRSVKASHILISV-------------------------DGKVYLSGLRSNL 176

Query: 312 KDGPEGDKTHV----STRVMGTYGYAAPEYVMTGHL---TSRSDVYSFGVVLLEMLTGR- 363
                G +  V        +    + +PE V+  +L    ++SD+YS G+   E+  G  
Sbjct: 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPE-VLQQNLQGYDAKSDIYSVGITACELANGHV 235

Query: 364 -------------------------------RSMDKNRPNGEHNLVEWARPHLGERRRFY 392
                                                  +  ++ +  +      R    
Sbjct: 236 PFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295

Query: 393 RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
                     FS             CL R+P ARP
Sbjct: 296 DSPSHPYHRTFS----PHFHHFVEQCLQRNPDARP 326

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 80.8 bits (200), Expect = 7e-17
 Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 62/285 (21%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGW 149
           ++          S  +   + K     +  T +        F     LG G FG V    
Sbjct: 2   NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVML-- 59

Query: 150 IEENGTAPVKP-GTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIGYCI 205
                   VK   +G   A+K L+   +   K+    L E   L  +    LVKL  +  
Sbjct: 60  --------VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSF 110

Query: 206 EDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIRM---KIALGAAKGLAFLHEEAERPV 260
           +D+  L +V E++  G + +HL R      P + R    +I L       +LH      +
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAAQIVLT----FEYLHS---LDL 162

Query: 261 IYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT 320
           IYRD K  N+L+D          G+                  +++DFG AK       T
Sbjct: 163 IYRDLKPENLLIDQ--------QGYI-----------------QVTDFGFAKRVKGRTWT 197

Query: 321 HVSTRVMGTYGYAAPEYVMT-GHLTSRS-DVYSFGVVLLEMLTGR 363
                + GT    APE +++ G+  +++ D ++ GV++ EM  G 
Sbjct: 198 -----LCGTPEALAPEIILSKGY--NKAVDWWALGVLIYEMAAGY 235

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 81.0 bits (200), Expect = 1e-16
 Identities = 75/424 (17%), Positives = 137/424 (32%), Gaps = 97/424 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G +G V+K   ++              A+K +   G+        E+  L +L H N
Sbjct: 29  VGRGTYGHVYKAKRKD-------GKDDKDYALKQIEGTGI--SMSACREIALLRELKHPN 79

Query: 197 LVKLIGYCIED-DQRL-LVYEFMP---RGSLENH----LFRRSLPLPWSIRMKIALGAAK 247
           ++ L    +   D+++ L++++        ++ H      ++ + LP  +   +      
Sbjct: 80  VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+ +LH      V++RD K +NIL+        G+                     K++D
Sbjct: 140 GIHYLHA---NWVLHRDLKPANILVMG-EGPERGRV--------------------KIAD 175

Query: 308 FGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
            G A+  + P      +   V+ T+ Y APE ++ G  H T   D+++ G +  E+LT  
Sbjct: 176 MGFARLFNSPLKPLADLDPVVV-TFWYRAPE-LLLGARHYTKAIDIWAIGCIFAELLTSE 233

Query: 364 -----RSMDKNRPNGEH--------------NLVEW-----------ARPHLGERRRFYR 393
                R  D    N  H                 +W                        
Sbjct: 234 PIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC 293

Query: 394 LIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK-------PLPNLKDMA 446
            +   +E H     + KA  L    L+ DP  R       +A++       PLP     A
Sbjct: 294 SLIKYMEKHKVKPDS-KAFHLLQKLLTMDPIKRITSE---QAMQDPYFLEDPLPTSDVFA 349

Query: 447 SSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNGQRSLSIPNGSYASPYHHQFPHPSPK 506
                +   +       P+ +   + Q      N       P        +    H    
Sbjct: 350 GCQIPYP-KREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPG-------NQDSSHTQGP 401

Query: 507 PNGK 510
           P  K
Sbjct: 402 PLKK 405

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 72/275 (26%), Positives = 100/275 (36%), Gaps = 69/275 (25%)

Query: 102 STSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPG 161
             S  E      +   +   ++       F    +LG+G FG V                
Sbjct: 3   KESSKEGNGIGVNSSNRLGIDN-------FEFIRVLGKGSFGKVMLA---------RVKE 46

Query: 162 TGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV-HLNLVKLIGYCIEDDQRL-LVYEF 216
           TG   AVK L  D +    +    + E   L     H  L +L   C +   RL  V EF
Sbjct: 47  TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF-CCFQTPDRLFFVMEF 105

Query: 217 MPRGSLENHLFR-RSLPLPWSIRMK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNI 270
           +  G L  H+ + R        R +     I       L FLH+   + +IYRD K  N+
Sbjct: 106 VNGGDLMFHIQKSRRFDEA---RARFYAAEIISA----LMFLHD---KGIIYRDLKLDNV 155

Query: 271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GT 329
           LLD          G C                 KL+DFG+ K+G     T   T    GT
Sbjct: 156 LLDHE--------GHC-----------------KLADFGMCKEGICNGVT---TATFCGT 187

Query: 330 YGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
             Y APE ++   L   + D ++ GV+L EML G 
Sbjct: 188 PDYIAPE-ILQEMLYGPAVDWWAMGVLLYEMLCGH 221

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 79.7 bits (197), Expect = 2e-16
 Identities = 65/323 (20%), Positives = 112/323 (34%), Gaps = 62/323 (19%)

Query: 55  SSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVAS 114
           SS   + +      +   S   +  S    A  V S+   +      S       + + +
Sbjct: 9   SSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPA 68

Query: 115 RLRKFTFNDLKLATRNFR------PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
               F    +                 +LG G FG V K           +  TGL +A 
Sbjct: 69  PPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKC---------EETATGLKLAA 119

Query: 169 KTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL----- 222
           K +   G++  +E   E++ +  L H NL++L     E    + LV E++  G L     
Sbjct: 120 KIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA-FESKNDIVLVMEYVDGGELFDRII 178

Query: 223 -ENHLF--RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
            E++      ++       MK       G+  +H+     +++ D K  NIL        
Sbjct: 179 DESYNLTELDTILF-----MKQICE---GIRHMHQ---MYILHLDLKPENILCVNR---- 223

Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
                                   K+ DFGLA+     +K  V     GT  + APE V 
Sbjct: 224 -------------------DAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVN 261

Query: 340 TGHLTSRSDVYSFGVVLLEMLTG 362
              ++  +D++S GV+   +L+G
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSG 284

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 78.7 bits (195), Expect = 3e-16
 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 66/252 (26%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKP-GTGLTVAVKTLNHDGLQGHKEW- 182
           K + ++F+    LG G FG V            ++    G   A+K L  + +   K+  
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHL----------IRSRHNGRYYAMKVLKKEIVVRLKQVE 51

Query: 183 --LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFR-RSLPLPWSIR 238
               E   L  + H  ++++     +D Q++ ++ +++  G L + L + +  P P    
Sbjct: 52  HTNDERLMLSIVTHPFIIRMW-GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP---V 107

Query: 239 MK-----IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
            K     + L     L +LH    + +IYRD K  NILLD                    
Sbjct: 108 AKFYAAEVCLA----LEYLHS---KDIIYRDLKPENILLDK------------------- 141

Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRS-DVYS 351
                 + + K++DFG AK  P+   T     + GT  Y APE V T  +  ++S D +S
Sbjct: 142 ------NGHIKITDFGFAKYVPDVTYT-----LCGTPDYIAPEVVSTKPY--NKSIDWWS 188

Query: 352 FGVVLLEMLTGR 363
           FG+++ EML G 
Sbjct: 189 FGILIYEMLAGY 200

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 78.1 bits (193), Expect = 6e-16
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 51/236 (21%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           LGEG +G V+K              T  TVA+K +    L+  +E      + EV+ L +
Sbjct: 42  LGEGTYGEVYKAIDTV---------TNETVAIKRIR---LEHEEEGVPGTAIREVSLLKE 89

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L H N+++L      + +  L++E+     L+ ++  ++  +   +          G+ F
Sbjct: 90  LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSFLYQLINGVNF 147

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H    R  ++RD K  N+LL    A                          K+ DFGLA
Sbjct: 148 CHS---RRCLHRDLKPQNLLLSVSDASETP--------------------VLKIGDFGLA 184

Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
           +    P    TH    ++ T  Y  PE ++ G  H ++  D++S   +  EML   
Sbjct: 185 RAFGIPIRQFTH---EII-TLWYRPPE-ILLGSRHYSTSVDIWSIACIWAEMLMKT 235

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 78.6 bits (194), Expect = 7e-16
 Identities = 70/296 (23%), Positives = 115/296 (38%), Gaps = 60/296 (20%)

Query: 81  RDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEG 140
           R    A         +A  +   S+ ++  KV + +        +    ++    ++G G
Sbjct: 6   RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNG 65

Query: 141 GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKL 200
            FG V++  + +         +G  VA+K +    LQ  +    E+  +  L H N+V+L
Sbjct: 66  SFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 112

Query: 201 IGYCI------EDDQRL-LVYEFMPR--GSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
             Y        +D+  L LV +++P     +  H  R    LP            + LA+
Sbjct: 113 R-YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           +H      + +RD K  N+LLD                      +L      KL DFG A
Sbjct: 172 IH---SFGICHRDIKPQNLLLDPD------------------TAVL------KLCDFGSA 204

Query: 312 KDGPEGDK-TH-VSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
           K    G+     + +R    Y Y APE ++ G    TS  DV+S G VL E+L G+
Sbjct: 205 KQLVRGEPNVSYICSR----Y-YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 77.8 bits (192), Expect = 7e-16
 Identities = 81/348 (23%), Positives = 120/348 (34%), Gaps = 101/348 (29%)

Query: 113 ASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
           A  L +   + L+     F    L+G G +G V+KG   +         TG   A+K ++
Sbjct: 8   ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVK---------TGQLAAIKVMD 58

Query: 173 HDGLQGHKEWLAEVNFLGDLV-HLNLVKLIG------YCIEDDQRLLVYEFMPRGSLE-- 223
             G    +E   E+N L     H N+    G          DDQ  LV EF   GS+   
Sbjct: 59  VTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117

Query: 224 -NHLFRRSLPLPWSIRMKIAL---GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
             +    +L   W     IA       +GL+ LH+     VI+RD K  N+LL       
Sbjct: 118 IKNTKGNTLKEEW-----IAYICREILRGLSHLHQHK---VIHRDIKGQNVLLT------ 163

Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPE 336
                              ++   KL DFG++             R    +GT  + APE
Sbjct: 164 -------------------ENAEVKLVDFGVS-----AQLDRTVGRRNTFIGTPYWMAPE 199

Query: 337 YVMTGHLT-----SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGE---R 388
            +            +SD++S G+  +EM  G        P           P       R
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEG-------AP-----------PLCDMHPMR 241

Query: 389 RRFYRLID----PRLEG-HFSIKGAQKAAQLAAHCLSRDPKARPLMSE 431
             F  LI     PRL+   +S    +K       CL ++   RP   +
Sbjct: 242 ALF--LIPRNPAPRLKSKKWS----KKFQSFIESCLVKNHSQRPATEQ 283

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 77.7 bits (192), Expect = 8e-16
 Identities = 63/249 (25%), Positives = 100/249 (40%), Gaps = 54/249 (21%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
              F+ E + G+G FG V  G  +          TG++VA+K +  D    ++E L  + 
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKS---------TGMSVAIKKVIQDPRFRNRE-LQIMQ 71

Query: 188 FLGDLVHLNLVKLI------GYCIEDDQRL-LVYEFMPR--GSLENHLFRRSLPLPWSIR 238
            L  L H N+V+L       G     D  L +V E++P        + +RR +  P  + 
Sbjct: 72  DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILI 131

Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
                   + +  LH  +   V +RD K  N+L++                    +  L 
Sbjct: 132 KVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEA------------------DGTL- 171

Query: 299 QDYNAKLSDFGLAKD-GPEGDKTH-VSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGV 354
                KL DFG AK   P       + +R    Y Y APE ++ G  H T+  D++S G 
Sbjct: 172 -----KLCDFGSAKKLSPSEPNVAYICSR----Y-YRAPE-LIFGNQHYTTAVDIWSVGC 220

Query: 355 VLLEMLTGR 363
           +  EM+ G 
Sbjct: 221 IFAEMMLGE 229

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 77.3 bits (191), Expect = 8e-16
 Identities = 74/321 (23%), Positives = 118/321 (36%), Gaps = 88/321 (27%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----E 185
           N+R    +G+G F  V                TG  VA+K ++   L      L     E
Sbjct: 16  NYRLLKTIGKGNFAKVKLA---------RHILTGREVAIKIIDKTQLN--PTSLQKLFRE 64

Query: 186 VNFLGDLVHLNLVKLIGY-CIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
           V  +  L H N+VKL  +  IE ++ L L+ E+   G + ++L           RMK   
Sbjct: 65  VRIMKILNHPNIVKL--FEVIETEKTLYLIMEYASGGEVFDYLVAHG-------RMKEKE 115

Query: 244 GAAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
             +K       + + H+   + +++RD K  N+LLDA                       
Sbjct: 116 ARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDA----------------------- 149

Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVV 355
             D N K++DFG + +   G K        G   YAAPE +  G        DV+S GV+
Sbjct: 150 --DMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPE-LFQGKKYDGPEVDVWSLGVI 203

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQ 413
           L  +++G    D        NL E               +   L G + I    +     
Sbjct: 204 LYTLVSGSLPFD------GQNLKE-----------LRERV---LRGKYRIPFYMSTDCEN 243

Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L    L  +P  R  + ++++
Sbjct: 244 LLKRFLVLNPIKRGTLEQIMK 264

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 72/314 (22%), Positives = 109/314 (34%), Gaps = 85/314 (27%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVHL 195
           LG G FG V             +  +GL   +KT+N D  Q   E +  E+  L  L H 
Sbjct: 30  LGSGAFGDVHLV---------EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR----------MKIALG 244
           N++K+     ED   + +V E    G  E  L  R +      +          MK  + 
Sbjct: 81  NIIKIFEV-FEDYHNMYIVMETCEGG--E--LLERIVSAQARGKALSEGYVAELMKQMMN 135

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           A   LA+ H    + V+++D K  NIL                                K
Sbjct: 136 A---LAYFHS---QHVVHKDLKPENILFQDTS----------------------PHSPIK 167

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFGLA+     +    +    GT  Y APE V    +T + D++S GVV+  +LTG  
Sbjct: 168 IIDFGLAELFKSDEH--STNAA-GTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGC- 222

Query: 365 SMDKNRPNGEHNLVEWARPHLGE-RRRFYRLIDPRLEGHFSIKGA-----QKAAQLAAHC 418
                             P  G       +          +          +A  L    
Sbjct: 223 -----------------LPFTGTSLEEVQQKA---TYKEPNYAVECRPLTPQAVDLLKQM 262

Query: 419 LSRDPKARPLMSEV 432
           L++DP+ RP  ++V
Sbjct: 263 LTKDPERRPSAAQV 276

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 78.7 bits (194), Expect = 1e-15
 Identities = 60/310 (19%), Positives = 99/310 (31%), Gaps = 51/310 (16%)

Query: 62  SSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSN-AESNSSTSKLEEELKVASRLRKFT 120
            +  G S   E  +      D+                    T     +  V    +++ 
Sbjct: 85  ENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYY 144

Query: 121 FNDLKLATRNFRP----ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
              +++   +          LG G FG V +           +  TG   A K +     
Sbjct: 145 PQPVEIKHDHVLDHYDIHEELGTGAFGVVHRV---------TERATGNNFAAKFVMTPHE 195

Query: 177 QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
              +    E+  +  L H  LV L     +D++ +++YEFM  G  E  LF +       
Sbjct: 196 SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG--E--LFEKVADEHNK 251

Query: 237 IRMKIALGAAK----GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           +    A+   +    GL  +H   E   ++ D K  NI+    R                
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKR---------------- 292

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
                      KL DFGL           V     GT  +AAPE      +   +D++S 
Sbjct: 293 -------SNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEGKPVGYYTDMWSV 342

Query: 353 GVVLLEMLTG 362
           GV+   +L+G
Sbjct: 343 GVLSYILLSG 352

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 70/317 (22%), Positives = 104/317 (32%), Gaps = 95/317 (29%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           +G G +G V            V+ GT +  A K +    ++    +  E+  +  L H N
Sbjct: 17  IGRGSWGEVKIA---------VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-------------MKIA 242
           +++L     ED+  + LV E    G  E  LF R       +              MK  
Sbjct: 68  IIRLYET-FEDNTDIYLVMELCTGG--E--LFER-------VVHKRVFRESDAARIMKDV 115

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           L A   +A+ H+     V +RD K  N L                            D  
Sbjct: 116 LSA---VAYCHK---LNVAHRDLKPENFLFLTDS----------------------PDSP 147

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFGLA     G    + T+V GT  Y +P+ V+ G      D +S GV++  +L G
Sbjct: 148 LKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGE-RRRFYRLIDPRLEGHFSIKGA------QKAAQLA 415
                               P            I    EG F+           +A  L 
Sbjct: 204 Y------------------PPFSAPTDSEVMLKI---REGTFTFPEKDWLNVSPQAESLI 242

Query: 416 AHCLSRDPKARPLMSEV 432
              L++ PK R    + 
Sbjct: 243 RRLLTKSPKQRITSLQA 259

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 76.0 bits (188), Expect = 1e-15
 Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 56/236 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           +GEG +G V+K           +   G T A+K +    L+   E      + E++ L +
Sbjct: 10  IGEGTYGVVYKA----------QNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L H N+VKL        + +LV+E + +  L+  L      L         L    G+A+
Sbjct: 57  LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H   +R V++RD K  N+L++       G                      K++DFGLA
Sbjct: 116 CH---DRRVLHRDLKPQNLLIN-----REG--------------------ELKIADFGLA 147

Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
           +    P    TH    ++ T  Y AP+ V+ G    ++  D++S G +  EM+ G 
Sbjct: 148 RAFGIPVRKYTH---EIV-TLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 69/317 (21%), Positives = 108/317 (34%), Gaps = 81/317 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGD 191
           +G+G F  V +          +   TG   AVK ++                 E +    
Sbjct: 32  IGKGPFSVVRRC---------INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW------SIRMKIALG 244
           L H ++V+L+      D  L +V+EFM    L   + +R+           S  M+  L 
Sbjct: 83  LKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           A   L + H   +  +I+RD K   +LL A +                           K
Sbjct: 142 A---LRYCH---DNNIIHRDVKPHCVLL-ASKEN---------------------SAPVK 173

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           L  FG+A    E        RV GT  + APE V+      +  DV+  GV+L  +L+G 
Sbjct: 174 LGGFGVAIQLGESGLV-AGGRV-GTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSGC 230

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ------KAAQLAAH 417
                              P  G + R +  I   ++G + +   Q       A  L   
Sbjct: 231 ------------------LPFYGTKERLFEGI---IKGKYKMNPRQWSHISESAKDLVRR 269

Query: 418 CLSRDPKARPLMSEVVE 434
            L  DP  R  + E + 
Sbjct: 270 MLMLDPAERITVYEALN 286

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 76.5 bits (189), Expect = 2e-15
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 56/243 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLA 184
            +     LGEG +  V+KG  +          T   VA+K +  +    H+E      + 
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKL---------TDNLVALKEIRLE----HEEGAPCTAIR 49

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           EV+ L DL H N+V L      +    LV+E++ +  L+ +L      +           
Sbjct: 50  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQ 108

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GLA+ H    + V++RD K  N+L++       G                      K
Sbjct: 109 LLRGLAYCHR---QKVLHRDLKPQNLLIN-----ERG--------------------ELK 140

Query: 305 LSDFGLA--KDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEML 360
           L+DFGLA  K  P     +    V+ T  Y  P+ ++ G    +++ D++  G +  EM 
Sbjct: 141 LADFGLARAKSIPTKTYDN---EVV-TLWYRPPD-ILLGSTDYSTQIDMWGVGCIFYEMA 195

Query: 361 TGR 363
           TGR
Sbjct: 196 TGR 198

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 55/237 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           +GEG +G VFK    E         T   VA+K +    L    E      L E+  L +
Sbjct: 10  IGEGTYGTVFKAKNRE---------THEIVALKRVR---LDDDDEGVPSSALREICLLKE 57

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L H N+V+L      D +  LV+EF  +  L+ +    +  L   I         KGL F
Sbjct: 58  LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H    R V++RD K  N+L++       G                      KL++FGLA
Sbjct: 117 CH---SRNVLHRDLKPQNLLIN-----RNG--------------------ELKLANFGLA 148

Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGRR 364
           +    P    +     V+ T  Y  P+ V+ G    ++  D++S G +  E+    R
Sbjct: 149 RAFGIPVRCYSA---EVV-TLWYRPPD-VLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 75.7 bits (187), Expect = 3e-15
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 56/236 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           +GEG +G V+K           K   G  VA+K +    L    E      + E++ L +
Sbjct: 29  VGEGTYGVVYKA----------KDSQGRIVALKRIR---LDAEDEGIPSTAIREISLLKE 75

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L H N+V LI     +    LV+EFM +  L+  L      L  S          +G+A 
Sbjct: 76  LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
            H   +  +++RD K  N+L++     + G                      KL+DFGLA
Sbjct: 135 CH---QHRILHRDLKPQNLLIN-----SDG--------------------ALKLADFGLA 166

Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
           +    P    TH    V+ T  Y AP+ V+ G    ++  D++S G +  EM+TG+
Sbjct: 167 RAFGIPVRSYTH---EVV-TLWYRAPD-VLMGSKKYSTSVDIWSIGCIFAEMITGK 217

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 76.6 bits (189), Expect = 3e-15
 Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 62/287 (21%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGW 149
           S T ++   +    + L++  KV   L        +     +    ++G G FG VF+  
Sbjct: 2   SFTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIA-YTNCKVIGNGSFGVVFQAK 60

Query: 150 IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI---- 205
           + E+            VA+K +    LQ  +    E+  +  + H N+V L         
Sbjct: 61  LVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLK-AFFYSNG 105

Query: 206 --EDDQRL-LVYEFMPR--GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV 260
             +D+  L LV E++P        H  +    +P  +         + LA++H      +
Sbjct: 106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGI 162

Query: 261 IYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK- 319
            +RD K  N+LLD                    + +L      KL DFG AK    G+  
Sbjct: 163 CHRDIKPQNLLLDPP------------------SGVL------KLIDFGSAKILIAGEPN 198

Query: 320 TH-VSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
              + +R    Y Y APE ++ G  + T+  D++S G V+ E++ G+
Sbjct: 199 VSYICSR----Y-YRAPE-LIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 56/248 (22%), Positives = 85/248 (34%), Gaps = 72/248 (29%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--------EVNF 188
           LG G  G V             +  T   VA+K ++           A        E+  
Sbjct: 18  LGSGACGEVKLA---------FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---A 245
           L  L H  ++K+  +  + +   +V E M  G  E  LF +       +     L     
Sbjct: 69  LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG--E--LFDK-------VVGNKRLKEATC 116

Query: 246 AK-------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
                     + +LHE     +I+RD K  N+LL +                        
Sbjct: 117 KLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQE---------------------- 151

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR----SDVYSFGV 354
           +D   K++DFG +K   E       T   GT  Y APE V+    T+      D +S GV
Sbjct: 152 EDCLIKITDFGHSKILGETSLM--RTLC-GTPTYLAPE-VLVSVGTAGYNRAVDCWSLGV 207

Query: 355 VLLEMLTG 362
           +L   L+G
Sbjct: 208 ILFICLSG 215

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 74.2 bits (183), Expect = 6e-15
 Identities = 72/321 (22%), Positives = 109/321 (33%), Gaps = 97/321 (30%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           LG+G FG V K              T    AVK +N    +       L EV  L  L H
Sbjct: 30  LGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-------------MK 240
            N++KL     ED     +V E    G  E  LF         I              +K
Sbjct: 81  PNIMKLFEIL-EDSSSFYIVGELYTGG--E--LFDE-------IIKRKRFSEHDAARIIK 128

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                   + ++H+     +++RD K  NILL++                        +D
Sbjct: 129 QVFSG---ITYMHK---HNIVHRDLKPENILLESKE----------------------KD 160

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            + K+ DFGL+    +  K     R+ GT  Y APE V+ G    + DV+S GV+L  +L
Sbjct: 161 CDIKIIDFGLSTCFQQNTKM--KDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILL 216

Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGE-RRRFYRLIDPRLEGHFSIKGA------QKAAQ 413
           +G                    P  G+      + +     G ++            A  
Sbjct: 217 SGT------------------PPFYGKNEYDILKRV---ETGKYAFDLPQWRTISDDAKD 255

Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L    L+  P  R   ++ +E
Sbjct: 256 LIRKMLTFHPSLRITATQCLE 276

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 74.9 bits (185), Expect = 7e-15
 Identities = 66/236 (27%), Positives = 96/236 (40%), Gaps = 52/236 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           LGEG F  V+K   +          T   VA+K +        K+      L E+  L +
Sbjct: 18  LGEGQFATVYKARDKN---------TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L H N++ L+          LV++FM    LE  +   SL L  S      L   +GL +
Sbjct: 69  LSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           LH   +  +++RD K +N+LLD                    N +L      KL+DFGLA
Sbjct: 128 LH---QHWILHRDLKPNNLLLDE-------------------NGVL------KLADFGLA 159

Query: 312 K--DGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
           K    P    TH V TR      Y APE +    +     D+++ G +L E+L   
Sbjct: 160 KSFGSPNRAYTHQVVTR-----WYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 75.1 bits (185), Expect = 7e-15
 Identities = 52/281 (18%), Positives = 94/281 (33%), Gaps = 50/281 (17%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRP----ESLLGEGGFGCV 145
               +            + +       +K+    +++   +          LG G FG V
Sbjct: 8   HHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVV 67

Query: 146 FKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI 205
            +          V+  TG     K +N            E++ +  L H  L+ L     
Sbjct: 68  HRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA-F 117

Query: 206 EDDQRL-LVYEFMPRGSLENHLFRRSLPLP---WSIRMKIALGAAKGLAFLHEEAERPVI 261
           ED   + L+ EF+  G L + +      +        M+ A     GL  +HE     ++
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE---GLKHMHE---HSIV 171

Query: 262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH 321
           + D K  NI+ +  +                         + K+ DFGLA      +   
Sbjct: 172 HLDIKPENIMCETKK-----------------------ASSVKIIDFGLATKLNPDEIVK 208

Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           V      T  +AAPE V    +   +D+++ GV+   +L+G
Sbjct: 209 V---TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 74.4 bits (183), Expect = 1e-14
 Identities = 67/338 (19%), Positives = 113/338 (33%), Gaps = 83/338 (24%)

Query: 55  SSRSKVDSSVSGTSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVAS 114
             R +    +         +        +   +  ++      + N +  K  E L   S
Sbjct: 17  KERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQS 76

Query: 115 RLRKFTFNDLKLA---TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
              +    D   A    + + P+ ++G G    V +          V   TG   AVK +
Sbjct: 77  MGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRC---------VHRATGHEFAVKIM 127

Query: 172 NHDGLQGHKEWLA--------EVNFLGDLV-HLNLVKLIGYCIEDDQRL-LVYEFMPRGS 221
                +   E L         E + L  +  H +++ LI    E    + LV++ M +G 
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY-ESSSFMFLVFDLMRKG- 185

Query: 222 LENHLFRRSLPLPWSIRMKIALG---AAK-------GLAFLHEEAERPVIYRDFKTSNIL 271
            E  LF         +  K+AL               ++FLH      +++RD K  NIL
Sbjct: 186 -E--LFDY-------LTEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENIL 232

Query: 272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 331
           LD                          +   +LSDFG +     G+K        GT G
Sbjct: 233 LD-------------------------DNMQIRLSDFGFSCHLEPGEKL--RELC-GTPG 264

Query: 332 YAAPEYVMTGHLTSRS-------DVYSFGVVLLEMLTG 362
           Y APE ++   +           D+++ GV+L  +L G
Sbjct: 265 YLAPE-ILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 59/240 (24%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           LG G +  V+KG  +          TG+ VA+K +  D     +E      + E++ + +
Sbjct: 13  LGNGTYATVYKGLNKT---------TGVYVALKEVKLD----SEEGTPSTAIREISLMKE 59

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMP---RGSLENHLFRRS-LPLPWSIRMKIALGAAK 247
           L H N+V+L      +++  LV+EFM    +  +++     +   L  ++         +
Sbjct: 60  LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GLAF H   E  +++RD K  N+L++       G                      KL D
Sbjct: 120 GLAFCH---ENKILHRDLKPQNLLIN-----KRG--------------------QLKLGD 151

Query: 308 FGLA--KDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
           FGLA     P    +     V+ T  Y AP+ V+ G    ++  D++S G +L EM+TG+
Sbjct: 152 FGLARAFGIPVNTFSS---EVV-TLWYRAPD-VLMGSRTYSTSIDIWSCGCILAEMITGK 206

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 54/241 (22%), Positives = 83/241 (34%), Gaps = 67/241 (27%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
           +LG G F  VF            +  TG   A+K +             E+  L  + H 
Sbjct: 16  VLGSGAFSEVFLV---------KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66

Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG------AAK- 247
           N+V L     E      LV + +  G  E  LF R       I   +  G      A+  
Sbjct: 67  NIVTLEDI-YESTTHYYLVMQLVSGG--E--LFDR-------I---LERGVYTEKDASLV 111

Query: 248 ------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                  + +LHE     +++RD K  N+L                           ++ 
Sbjct: 112 IQQVLSAVKYLHE---NGIVHRDLKPENLLYLT----------------------PEENS 146

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
              ++DFGL+K    G    + +   GT GY APE +     +   D +S GV+   +L 
Sbjct: 147 KIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC 202

Query: 362 G 362
           G
Sbjct: 203 G 203

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 56/242 (23%), Positives = 90/242 (37%), Gaps = 57/242 (23%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----EVNFLGD 191
           LLGEG +G V +    E         T    AVK L    L+      A    E+  L  
Sbjct: 12  LLGEGSYGKVKEVLDSE---------TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62

Query: 192 LVHLNLVKLIG-YCIEDDQRL-LVYEFMPRGSLE--NHLFRRSLPLPWSIRMKIALGAAK 247
           L H N+++L+     E+ Q++ +V E+   G  E  + +  +  P+  +      L    
Sbjct: 63  LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL--ID 120

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL +LH    + ++++D K  N+LL                               K+S 
Sbjct: 121 GLEYLHS---QGIVHKDIKPGNLLLTT-------------------------GGTLKISA 152

Query: 308 FGLA---KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT---SRSDVYSFGVVLLEMLT 361
            G+A         D    S    G+  +  PE +  G  T    + D++S GV L  + T
Sbjct: 153 LGVAEALHPFAADDTCRTSQ---GSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITT 208

Query: 362 GR 363
           G 
Sbjct: 209 GL 210

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 55/278 (19%), Positives = 90/278 (32%), Gaps = 89/278 (32%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-----EVNFLGD 191
           +G+G +G V            ++  T    A+K +N + ++            EV  +  
Sbjct: 34  IGQGSYGVVRVA---------IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 192 LVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG------ 244
           L H N+ +L     ED+Q + LV E    G L + L            M +         
Sbjct: 85  LHHPNIARLYE-VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143

Query: 245 --------------------------AAK-------GLAFLHEEAERPVIYRDFKTSNIL 271
                                      +         L +LH    + + +RD K  N L
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFL 200

Query: 272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK---DGPEGDKTHVSTRVMG 328
                                      + +  KL DFGL+K       G+   ++T+  G
Sbjct: 201 FSTN-----------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-G 236

Query: 329 TYGYAAPEYVMTGHLTS---RSDVYSFGVVLLEMLTGR 363
           T  + APE V+     S   + D +S GV+L  +L G 
Sbjct: 237 TPYFVAPE-VLNTTNESYGPKCDAWSAGVLLHLLLMGA 273

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 60/239 (25%), Positives = 86/239 (35%), Gaps = 58/239 (24%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
            LGEG +G V            V   T   VAVK ++        E +  E+     L H
Sbjct: 14  TLGEGAYGEVQLA---------VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK------ 247
            N+VK  G    +     L  E+   G L + +          I M     A +      
Sbjct: 65  ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPD-------IGMPEPD-AQRFFHQLM 115

Query: 248 -GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            G+ +LH      + +RD K  N+LLD                            N K+S
Sbjct: 116 AGVVYLHG---IGITHRDIKPENLLLDE-------------------------RDNLKIS 147

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVLLEMLTGR 363
           DFGLA      ++  +  ++ GT  Y APE ++          DV+S G+VL  ML G 
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 72.8 bits (179), Expect = 3e-14
 Identities = 67/366 (18%), Positives = 112/366 (30%), Gaps = 103/366 (28%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGW 149
            S+      S+ +        K+A    K            ++   LLG GGFG V+ G 
Sbjct: 10  HSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLES------QYQVGPLLGSGGFGSVYSG- 62

Query: 150 IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLGDLVHL--NLVKLI 201
                   ++    L VA+K +  D +    E         EV  L  +      +++L+
Sbjct: 63  --------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 114

Query: 202 GYCIEDDQRL-LVYEF-MPRGSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLH 253
            +  E      L+ E   P   L + +  R         ++  L  +        +   H
Sbjct: 115 DW-FERPDSFVLILERPEPVQDLFDFITERG-------ALQEELARSFFWQVLEAVRHCH 166

Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA-- 311
                 V++RD K  NIL+D                              KL DFG    
Sbjct: 167 N---CGVLHRDIKDENILIDL------------------------NRGELKLIDFGSGAL 199

Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVLLEMLTGRRSMDK 368
            KD              GT  Y+ PE++   H      + V+S G++L +M+ G    + 
Sbjct: 200 LKDTVY--TDFD-----GTRVYSPPEWIR-YHRYHGRSAAVWSLGILLYDMVCGDIPFE- 250

Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
                +  ++                   +     S     +   L   CL+  P  RP 
Sbjct: 251 ----HDEEIIRGQ----------VFF--RQ---RVS----SECQHLIRWCLALRPSDRPT 287

Query: 429 MSEVVE 434
             E+  
Sbjct: 288 FEEIQN 293

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 74/317 (23%), Positives = 115/317 (36%), Gaps = 91/317 (28%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA---EVNFLGDL 192
            LG G FG V  G             TG  VAVK LN   ++          E+  L   
Sbjct: 18  TLGVGTFGKVKIG---------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68

Query: 193 VHLNLVKLIGY-CIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK--- 247
            H +++KL  Y  I       +V E++  G L +++ +         R++          
Sbjct: 69  RHPHIIKL--YQVISTPTDFFMVMEYVSGGELFDYICKHG-------RVEEMEARRLFQQ 119

Query: 248 ---GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
               + + H      V++RD K  N+LLDA                           NAK
Sbjct: 120 ILSAVDYCHR---HMVVHRDLKPENVLLDA-------------------------HMNAK 151

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVLLEMLTG 362
           ++DFGL+    +G+    S    G+  YAAPE V++G L      D++S GV+L  +L G
Sbjct: 152 IADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI-----KGAQKAAQLAAH 417
               D      + ++              ++ I     G F I     +       L  H
Sbjct: 208 TLPFD------DEHV-----------PTLFKKI---RGGVFYIPEYLNRSVAT---LLMH 244

Query: 418 CLSRDPKARPLMSEVVE 434
            L  DP  R  + ++ E
Sbjct: 245 MLQVDPLKRATIKDIRE 261

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 72.1 bits (177), Expect = 4e-14
 Identities = 37/322 (11%), Positives = 78/322 (24%), Gaps = 93/322 (28%)

Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
              R +R     G       ++                  VA+  ++  G+      +E 
Sbjct: 29  ANGR-YRLLIFHGGVPPLQFWQALDTA---------LDRQVALTFVDPQGVLPDDVLQET 78

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L+    L  +    + +++         L+V E++  GSL+      + P P    ++  
Sbjct: 79  LSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA--DTSPSPVGA-IRAM 135

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
              A      H      V       S + +                           D +
Sbjct: 136 QSLAAAADAAHR---AGVALSIDHPSRVRVSI-------------------------DGD 167

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
             L+                                       + D+   G  L  +L  
Sbjct: 168 VVLAYPA----------------------TMPDA-------NPQDDIRGIGASLYALLVN 198

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGER----RRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           R  + +    G  + +  A      +        R I  ++              +AA  
Sbjct: 199 RWPLPE---AGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS------------AVAARS 243

Query: 419 LSRDPKARPLMSEVVEALKPLP 440
           +  D   R   S ++  ++   
Sbjct: 244 VQGDGGIRSA-STLLNLMQQAT 264

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 68/311 (21%), Positives = 109/311 (35%), Gaps = 72/311 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHL 195
           LGEG F    K          V   +    AVK ++       ++   E+  L     H 
Sbjct: 19  LGEGSFSICRKC---------VHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHP 66

Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAAKGL 249
           N+VKL      D     LV E +  G L   + ++     +S       M+  + A   +
Sbjct: 67  NIVKLHEVF-HDQLHTFLVMELLNGGELFERIKKKK---HFSETEASYIMRKLVSA---V 119

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
           + +H+     V++RD K  N+L                            +   K+ DFG
Sbjct: 120 SHMHD---VGVVHRDLKPENLLFTDEN----------------------DNLEIKIIDFG 154

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
            A+  P  ++  + T    T  YAAPE +         D++S GV+L  ML+G+      
Sbjct: 155 FARLKPPDNQP-LKTPC-FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ------ 206

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------QKAAQLAAHCLSRDP 423
            P         +            ++    +G FS +G       Q+A  L    L+ DP
Sbjct: 207 VPF-------QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDP 259

Query: 424 KARPLMSEVVE 434
             R  MS +  
Sbjct: 260 NKRLKMSGLRY 270

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 71.2 bits (175), Expect = 9e-14
 Identities = 60/239 (25%), Positives = 86/239 (35%), Gaps = 58/239 (24%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
            LGEG +G V            V   T   VAVK ++        E +  E+     L H
Sbjct: 14  TLGEGAYGEVQLA---------VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK------ 247
            N+VK  G    +     L  E+   G L + +          I M     A +      
Sbjct: 65  ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPD-------IGMPEPD-AQRFFHQLM 115

Query: 248 -GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
            G+ +LH      + +RD K  N+LLD                            N K+S
Sbjct: 116 AGVVYLHG---IGITHRDIKPENLLLDE-------------------------RDNLKIS 147

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVLLEMLTGR 363
           DFGLA      ++  +  ++ GT  Y APE ++          DV+S G+VL  ML G 
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 53/239 (22%), Positives = 89/239 (37%), Gaps = 57/239 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
           LG G F  V K           +  TGL  A K +     +  +  +       EV+ L 
Sbjct: 20  LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 191 DLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL------ENHLFRRSLPLPWSIRMKIAL 243
            ++H N++ L     E+   + L+ E +  G L      +  L         +  +K  L
Sbjct: 71  QVLHPNIITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEA----TSFIKQIL 125

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
               G+ +LH    + + + D K  NI+                       +      + 
Sbjct: 126 D---GVNYLHT---KKIAHFDLKPENIM---------------------LLDKNIPIPHI 158

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           KL DFGLA +  +G +      + GT  + APE V    L   +D++S GV+   +L+G
Sbjct: 159 KLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 68/251 (27%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAE 185
           + N+  +  LG+G F  V +          V   TGL  A K +N   L     ++   E
Sbjct: 5   SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG- 244
                 L H N+V+L     E+    LV++ +  G  E  LF         I   +A   
Sbjct: 56  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG--E--LFED-------I---VAREF 101

Query: 245 -----AAK-------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
                A+         +A+ H      +++R+ K  N+LL + +A+              
Sbjct: 102 YSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLAS-KAK-------------- 143

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYS 351
                      KL+DFGLA +  + +  H      GT GY +PE V+     +   D+++
Sbjct: 144 -------GAAVKLADFGLAIEVNDSEAWH--GFA-GTPGYLSPE-VLKKDPYSKPVDIWA 192

Query: 352 FGVVLLEMLTG 362
            GV+L  +L G
Sbjct: 193 CGVILYILLVG 203

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 68/391 (17%), Positives = 116/391 (29%), Gaps = 102/391 (26%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----- 184
            +   S LG G FG V+           V       V VK +  + +             
Sbjct: 25  KYSTMSPLGSGAFGFVWTA---------VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK 75

Query: 185 ---EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGS-LENHLFRRSLPLPWSIRM 239
              E+  L  + H N++K++    E+     LV E    G  L   + R         R+
Sbjct: 76  VTLEIAILSRVEHANIIKVLDI-FENQGFFQLVMEKHGSGLDLFAFIDRHP-------RL 127

Query: 240 KIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
              L +         + +L     + +I+RD K  NI++                     
Sbjct: 128 DEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAE------------------- 165

Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYS 351
                 D+  KL DFG A     G   +      GT  Y APE V+ G+       +++S
Sbjct: 166 ------DFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPE-VLMGNPYRGPELEMWS 215

Query: 352 FGVVLLEMLTGRRSMD--KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ 409
            GV L  ++         +                            P      S    +
Sbjct: 216 LGVTLYTLVFEENPFCELEETVEAA-----------------IHP--PY---LVS----K 249

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASSSYYFQTMQAERIGSSPNTR 467
           +   L +  L   P+ R  + ++V    +    NL D     Y ++ +       S    
Sbjct: 250 ELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLAD-----YTWEEVFRVNKPESGVLS 304

Query: 468 NGIRAQGGSLSRNGQRSLSIPNGSYASPYHH 498
                 G     +  ++  +  G     +HH
Sbjct: 305 AASLEMGNRSLSDVAQAQELCGGEGHHHHHH 335

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 81/263 (30%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--------HDGLQGH 179
             N+ P+ +LG G    V +          +   T    AVK ++         + +Q  
Sbjct: 16  YENYEPKEILGRGVSSVVRRC---------IHKPTCKEYAVKIIDVTGGGSFSAEEVQEL 66

Query: 180 KEWLA-EVNFLGDL-VHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWS 236
           +E    EV+ L  +  H N+++L     E +    LV++ M +G  E  LF         
Sbjct: 67  REATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKG--E--LFDY------- 114

Query: 237 IRMKIALG---AAK-------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
           +  K+ L      K        +  LH+     +++RD K  NILLD             
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLD------------- 158

Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                        D N KL+DFG +     G+K        GT  Y APE ++   +   
Sbjct: 159 ------------DDMNIKLTDFGFSCQLDPGEKL--REVC-GTPSYLAPE-IIECSMNDN 202

Query: 347 S-------DVYSFGVVLLEMLTG 362
                   D++S GV++  +L G
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAG 225

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 57/239 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
           LG G F  V K           +  TGL  A K +     +  +  ++      EV+ L 
Sbjct: 20  LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 191 DLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL------ENHLFRRSLPLPWSIRMKIAL 243
            ++H N++ L     E+   + L+ E +  G L      +  L         +  +K  L
Sbjct: 71  QVLHHNVITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEA----TSFIKQIL 125

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
               G+ +LH    + + + D K  NI+                       +      + 
Sbjct: 126 D---GVNYLHT---KKIAHFDLKPENIM---------------------LLDKNIPIPHI 158

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           KL DFGLA +  +G +      + GT  + APE V    L   +D++S GV+   +L+G
Sbjct: 159 KLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 69.7 bits (171), Expect = 5e-13
 Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 52/260 (20%)

Query: 111 KVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT 170
           +   R  +F  N     + N+  +  LG+G F  V +          V   TGL  A K 
Sbjct: 11  QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKI 61

Query: 171 LNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLF 227
           +N   L     ++   E      L H N+V+L    I+++    LV++ +  G L   + 
Sbjct: 62  INTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-IQEESFHYLVFDLVTGGELFEDIV 120

Query: 228 RRSLPLPWSIR-----MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
            R     +S       ++  L +   +A+ H      +++R+ K  N+LL +        
Sbjct: 121 ARE---FYSEADASHCIQQILES---IAYCH---SNGIVHRNLKPENLLLASKA------ 165

Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
                           +    KL+DFGLA +  + +  H      GT GY +PE +    
Sbjct: 166 ----------------KGAAVKLADFGLAIEVNDSEAWH--GFA-GTPGYLSPEVLKKDP 206

Query: 343 LTSRSDVYSFGVVLLEMLTG 362
            +   D+++ GV+L  +L G
Sbjct: 207 YSKPVDIWACGVILYILLVG 226

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 67/329 (20%), Positives = 106/329 (32%), Gaps = 101/329 (30%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN------HDGLQGHKEWL 183
            +R   LLG+GGFG VF G          +    L VA+K +          L       
Sbjct: 32  EYRLGPLLGKGGFGTVFAG---------HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82

Query: 184 AEVNFL----GDLVHLNLVKLIGYCIEDDQRL-LVYEF-MPRGSLENHLFRRSLPLPWSI 237
            EV  L        H  +++L+ +  E  +   LV E  +P   L +++  +        
Sbjct: 83  LEVALLWKVGAGGGHPGVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKG------- 134

Query: 238 RMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            +               +   H    R V++RD K  NIL+D                  
Sbjct: 135 PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDL----------------- 174

Query: 292 FFNNMLFQDYNAKLSDFGLA---KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS- 347
                  +   AKL DFG      D P            GT  Y+ PE++      +   
Sbjct: 175 -------RRGCAKLIDFGSGALLHDEPY--TDFD-----GTRVYSPPEWISRHQYHALPA 220

Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
            V+S G++L +M+ G                    P   ++      I   LE       
Sbjct: 221 TVWSLGILLYDMVCGD------------------IPFERDQE-----I---LEAELHFPA 254

Query: 408 --AQKAAQLAAHCLSRDPKARPLMSEVVE 434
             +     L   CL+  P +RP + E++ 
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLEEILL 283

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 68.4 bits (168), Expect = 5e-13
 Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 57/239 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
           LG G F  V K           + GTG   A K +    L   +  ++      EVN L 
Sbjct: 13  LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 191 DLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL------ENHLFRRSLPLPWSIRMKIAL 243
           ++ H N++ L     E+   + L+ E +  G L      +  L         +  +K  L
Sbjct: 64  EIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESLTEDEA----TQFLKQIL 118

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
               G+ +LH    + + + D K  NI+L                           +   
Sbjct: 119 D---GVHYLHS---KRIAHFDLKPENIMLLDKNVP---------------------NPRI 151

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           KL DFG+A     G++      + GT  + APE V    L   +D++S GV+   +L+G
Sbjct: 152 KLIDFGIAHKIEAGNEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 69.0 bits (169), Expect = 1e-12
 Identities = 74/320 (23%), Positives = 117/320 (36%), Gaps = 85/320 (26%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA---EV 186
           ++     LG G FG V  G             TG  VAVK LN   ++          E+
Sbjct: 17  HYILGDTLGVGTFGKVKVG---------KHELTGHKVAVKILNRQKIRSLDVVGKIRREI 67

Query: 187 NFLGDLVHLNLVKLIGY-CIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
             L    H +++KL  Y  I     + +V E++  G L +++ +         R+     
Sbjct: 68  QNLKLFRHPHIIKL--YQVISTPSDIFMVMEYVSGGELFDYICKNG-------RLDEKES 118

Query: 245 AAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
                    G+ + H      V++RD K  N+LLDA                        
Sbjct: 119 RRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDA------------------------ 151

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVL 356
              NAK++DFGL+    +G+    S    G+  YAAPE V++G L      D++S GV+L
Sbjct: 152 -HMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLYAGPEVDIWSSGVIL 206

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQL 414
             +L G    D      + ++              ++ I    +G F            L
Sbjct: 207 YALLCGTLPFD------DDHV-----------PTLFKKI---CDGIFYTPQYLNPSVISL 246

Query: 415 AAHCLSRDPKARPLMSEVVE 434
             H L  DP  R  + ++ E
Sbjct: 247 LKHMLQVDPMKRATIKDIRE 266

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 61/318 (19%), Positives = 103/318 (32%), Gaps = 85/318 (26%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H 194
           +LG G  G V +              TG   A+K L         +   EV+        
Sbjct: 36  VLGLGVNGKVLEC---------FHRRTGQKCALKLLYD-----SPKARQEVDHHWQASGG 81

Query: 195 LNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALG 244
            ++V ++    E+        L++ E M  G L + +  R     ++ R     M+    
Sbjct: 82  PHIVCILDVY-ENMHHGKRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGT 139

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA- 303
           A   + FLH      + +RD K  N+L                           ++ +A 
Sbjct: 140 A---IQFLHS---HNIAHRDVKPENLLY------------------------TSKEKDAV 169

Query: 304 -KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL+DFG AK+  +     + T    T  Y APE +         D++S GV++  +L G
Sbjct: 170 LKLTDFGFAKETTQNA---LQTPC-YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------QKAAQLAA 416
                            ++           R I     G +           + A QL  
Sbjct: 226 FPPF-------------YSNTGQAISPGMKRRI---RLGQYGFPNPEWSEVSEDAKQLIR 269

Query: 417 HCLSRDPKARPLMSEVVE 434
             L  DP  R  +++ + 
Sbjct: 270 LLLKTDPTERLTITQFMN 287

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 51/239 (21%), Positives = 86/239 (35%), Gaps = 57/239 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
           LG G F  V K           +  TGL  A K +     +  +  ++      EV+ L 
Sbjct: 19  LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 191 DLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL------ENHLFRRSLPLPWSIRMKIAL 243
           ++ H N++ L     E+   + L+ E +  G L      +  L         +  +K  L
Sbjct: 70  EIQHPNVITLHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEA----TEFLKQIL 124

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
                + +LH      + + D K  NI+                       +        
Sbjct: 125 NG---VYYLHS---LQIAHFDLKPENIM---------------------LLDRNVPKPRI 157

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           K+ DFGLA     G++      + GT  + APE V    L   +D++S GV+   +L+G
Sbjct: 158 KIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 64/315 (20%), Positives = 103/315 (32%), Gaps = 84/315 (26%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HL 195
           +G G +    +          +   T +  AVK ++        E   E+  L     H 
Sbjct: 30  IGVGSYSVCKRC---------IHKATNMEFAVKIIDKSKRDP-TE---EIEILLRYGQHP 76

Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAAKGL 249
           N++ L     +D + + +V E M  G L + + R+     +S R     +         +
Sbjct: 77  NIITLKDVY-DDGKYVYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKT---V 129

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH    + V++RD K SNIL     + N                        ++ DFG
Sbjct: 130 EYLHA---QGVVHRDLKPSNILY-VDESGNPESI--------------------RICDFG 165

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG----RRS 365
            AK     +   + T    T  + APE +      +  D++S GV+L  MLTG       
Sbjct: 166 FAKQLRAENGL-LMTPC-YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------QKAAQLAAHCL 419
            D                           I     G FS+ G         A  L +  L
Sbjct: 224 PDDTPE------------------EILARI---GSGKFSLSGGYWNSVSDTAKDLVSKML 262

Query: 420 SRDPKARPLMSEVVE 434
             DP  R   + V+ 
Sbjct: 263 HVDPHQRLTAALVLR 277

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 63/244 (25%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           +GEG +G VFK    +N         G  VA+K +    +Q  +E      + EV  L  
Sbjct: 19  IGEGAYGKVFKARDLKN--------GGRFVALKRVR---VQTGEEGMPLSTIREVAVLRH 67

Query: 192 L---VHLNLVKLI----GYCIEDDQRL-LVYEFMP---RGSLENHLFRRSLPLPWSIRMK 240
           L    H N+V+L         + + +L LV+E +       L+         +P      
Sbjct: 68  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV---PEPGVPTETIKD 124

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +     +GL FLH      V++RD K  NIL+      + G                   
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVT-----SSG------------------- 157

Query: 301 YNAKLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
              KL+DFGLA+    +   T     V+ T  Y APE ++     +  D++S G +  EM
Sbjct: 158 -QIKLADFGLARIYSFQMALTS---VVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212

Query: 360 LTGR 363
              +
Sbjct: 213 FRRK 216

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 66.3 bits (162), Expect = 6e-12
 Identities = 65/385 (16%), Positives = 120/385 (31%), Gaps = 83/385 (21%)

Query: 67  TSTHYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKL 126
           +++  +S      +   P      +     A+      +   +  V S L+      +  
Sbjct: 3   SNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIID- 61

Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV 186
                    +LG G  G V +              T    A+K L         +   EV
Sbjct: 62  --DYKVTSQVLGLGINGKVLQI---------FNKRTQEKFALKMLQD-----CPKARREV 105

Query: 187 NFLGDLV-HLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIR-- 238
                     ++V+++    E+        L+V E +  G L + +  R     ++ R  
Sbjct: 106 ELHWRASQCPHIVRIVDVY-ENLYAGRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREA 163

Query: 239 ---MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
              MK    A   + +LH      + +RD K  N+L  + R                   
Sbjct: 164 SEIMKSIGEA---IQYLHS---INIAHRDVKPENLLYTSKR------------------- 198

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
               +   KL+DFG AK+    +   ++T    T  Y APE +         D++S GV+
Sbjct: 199 ---PNAILKLTDFGFAKETTSHNS--LTTPC-YTPYYVAPEVLGPEKYDKSCDMWSLGVI 252

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------Q 409
           +  +L G        P        ++   L         I     G +           +
Sbjct: 253 MYILLCGY------PPF-------YSNHGLAISPGMKTRI---RMGQYEFPNPEWSEVSE 296

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVE 434
           +   L  + L  +P  R  ++E + 
Sbjct: 297 EVKMLIRNLLKTEPTQRMTITEFMN 321

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 65.4 bits (160), Expect = 7e-12
 Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 55/237 (23%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           LG G F  V +          +   TG   A K L           E L E+  L     
Sbjct: 37  LGRGKFAVVRQC---------ISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKS 87

Query: 195 L-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW--------SIRMKIALGA 245
              ++ L        + +L+ E+   G  E  +F   LP              +K  L  
Sbjct: 88  CPRVINLHEVYENTSEIILILEYAAGG--E--IFSLCLPELAEMVSENDVIRLIKQILE- 142

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             G+ +LH   +  +++ D K  NILL ++                          + K+
Sbjct: 143 --GVYYLH---QNNIVHLDLKPQNILLSSIY----------------------PLGDIKI 175

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            DFG+++      +      +MGT  Y APE +    +T+ +D+++ G++   +LT 
Sbjct: 176 VDFGMSRKIGHACELRE---IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 65.7 bits (161), Expect = 8e-12
 Identities = 63/250 (25%), Positives = 97/250 (38%), Gaps = 71/250 (28%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
           +G+G FG VFK    +         TG  VA+K +    ++  KE      L E+  L  
Sbjct: 25  IGQGTFGEVFKARHRK---------TGQKVALKKVL---MENEKEGFPITALREIKILQL 72

Query: 192 LVHLNLVKLIGYCIEDDQRL--------LVYEFMP---RGSLENHLFRRSLPLPWSIRMK 240
           L H N+V LI  C               LV++F      G L N L + +L     + M+
Sbjct: 73  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-MQ 131

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           + L    GL ++H      +++RD K +N+L+        G                   
Sbjct: 132 MLL---NGLYYIHR---NKILHRDMKAANVLIT-----RDG------------------- 161

Query: 301 YNAKLSDFGLA------KDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFG 353
              KL+DFGLA      K+      T+   RV+ T  Y  PE ++         D++  G
Sbjct: 162 -VLKLADFGLARAFSLAKNSQPNRYTN---RVV-TLWYRPPELLLGERDYGPPIDLWGAG 216

Query: 354 VVLLEMLTGR 363
            ++ EM T  
Sbjct: 217 CIMAEMWTRS 226

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 65.4 bits (160), Expect = 8e-12
 Identities = 71/323 (21%), Positives = 116/323 (35%), Gaps = 92/323 (28%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA---EV 186
            +     LGEG FG V                T   VA+K ++   L+     +    E+
Sbjct: 10  PYIIRETLGEGSFGKVKLA---------THYKTQQKVALKFISRQLLKKSDMHMRVEREI 60

Query: 187 NFLGDLVHLNLVKLIGY-CIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           ++L  L H +++KL  Y  I     + +V E+   G L +++  +        RM    G
Sbjct: 61  SYLKLLRHPHIIKL--YDVITTPTDIVMVIEYAG-GELFDYIVEKK-------RMTEDEG 110

Query: 245 AAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
                     + + H      +++RD K  N+LLD                         
Sbjct: 111 RRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDD------------------------ 143

Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVL 356
            + N K++DFGL+    +G+    S    G+  YAAPE V+ G L      DV+S G+VL
Sbjct: 144 -NLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKLYAGPEVDVWSCGIVL 198

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI-----KGAQKA 411
             ML GR   D      +  +              ++ +       + +      GAQ  
Sbjct: 199 YVMLVGRLPFD------DEFI-----------PNLFKKV---NSCVYVMPDFLSPGAQS- 237

Query: 412 AQLAAHCLSRDPKARPLMSEVVE 434
             L    +  DP  R  + E+  
Sbjct: 238 --LIRRMIVADPMQRITIQEIRR 258

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 65.3 bits (160), Expect = 8e-12
 Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 47/230 (20%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
           LG G FG V +          V+  +  T   K +   G         E++ L    H N
Sbjct: 13  LGRGEFGIVHRC---------VETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRN 62

Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLP---WSIRMKIALGAAKGLAFL 252
           ++ L     E  + L +++EF+    +   +   +  L        +       + L FL
Sbjct: 63  ILHLHESF-ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVC---EALQFL 118

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H      + + D +  NI+    R                           K+ +FG A+
Sbjct: 119 HS---HNIGHFDIRPENIIYQTRR-----------------------SSTIKIIEFGQAR 152

Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
               GD   +   +     Y APE      +++ +D++S G ++  +L+G
Sbjct: 153 QLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 58/243 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +++    LG G +  VF+     N            V VK L        K+   E+  L
Sbjct: 37  DYQLVRKLGRGKYSEVFEAINITNNE---------KVVVKILK---PVKKKKIKREIKIL 84

Query: 190 GDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL--PWSIR--MKIALG 244
            +L    N++ L     +   R     F     + N  F++       + IR  M   L 
Sbjct: 85  ENLRGGPNIITLADIVKDPVSRTPALVFEH---VNNTDFKQLYQTLTDYDIRFYMYEIL- 140

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             K L + H      +++RD K  N+++D                         +    +
Sbjct: 141 --KALDYCHS---MGIMHRDVKPHNVMIDH------------------------EHRKLR 171

Query: 305 LSDFGLAKDG-PEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLT 361
           L D+GLA+   P  +    V++R      +  PE ++   +   S D++S G +L  M+ 
Sbjct: 172 LIDWGLAEFYHPGQEYNVRVASRY-----FKGPELLVDYQMYDYSLDMWSLGCMLASMIF 226

Query: 362 GRR 364
            + 
Sbjct: 227 RKE 229

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 52/247 (21%), Positives = 89/247 (36%), Gaps = 67/247 (27%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF-------- 188
           +G G +G V+K              +G  VA+K++    +         +          
Sbjct: 17  IGVGAYGTVYKARDPH---------SGHFVALKSVR---VPNGGGGGGGLPISTVREVAL 64

Query: 189 ---LGDLVHLNLVKLI----GYCIEDDQRL-LVYEFMP---RGSLENHLFRRSLPLPWSI 237
              L    H N+V+L+        + + ++ LV+E +    R  L+         LP   
Sbjct: 65  LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA---PPPGLPAET 121

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
              +     +GL FLH      +++RD K  NIL+      + G                
Sbjct: 122 IKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVT-----SGG---------------- 157

Query: 298 FQDYNAKLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
                 KL+DFGLA+    +   T     V+ T  Y APE ++     +  D++S G + 
Sbjct: 158 ----TVKLADFGLARIYSYQMALTP---VVV-TLWYRAPEVLLQSTYATPVDMWSVGCIF 209

Query: 357 LEMLTGR 363
            EM   +
Sbjct: 210 AEMFRRK 216

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 53/282 (18%), Positives = 98/282 (34%), Gaps = 94/282 (33%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK-TLNHDGLQGHKEWLAEV 186
           ++ +     LG G FG V + +  E         +G   A+K  L        +    E+
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIE---------SGKRFALKKVLQDP-----RYKNREL 51

Query: 187 NFLGDLVHLNLVKLIGY-------------------------------------CIEDDQ 209
           + +  L H+N++KL+ Y                                         ++
Sbjct: 52  DIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNK 111

Query: 210 RL-LVYEFMPR--GSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAFLHEEAERPVIYRDF 265
            L ++ E++P     +     R    +P    + I +    + + F+H      + +RD 
Sbjct: 112 YLNVIMEYVPDTLHKVLKSFIRSGRSIP-MNLISIYIYQLFRAVGFIHSLG---ICHRDI 167

Query: 266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK-TH-VS 323
           K  N+L+++                        +D   KL DFG AK     +     + 
Sbjct: 168 KPQNLLVNS------------------------KDNTLKLCDFGSAKKLIPSEPSVAYIC 203

Query: 324 TRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
           +R    + Y APE +M G    T   D++S G V  E++ G+
Sbjct: 204 SR----F-YRAPE-LMLGATEYTPSIDLWSIGCVFGELILGK 239

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 81/385 (21%), Positives = 122/385 (31%), Gaps = 103/385 (26%)

Query: 70  HYESKSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATR 129
           H+   S  D   +        S ++  A +   T+ L  +  +     +   +D      
Sbjct: 4   HHHHSSGVDLGTENLYF---QSMSSVTASAAPGTASLVPDYWIDGS-NRDALSDF----- 54

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
            F  ES LG G    V++           + GT    A+K L        K    E+  L
Sbjct: 55  -FEVESELGRGATSIVYRC---------KQKGTQKPYALKVLKKT--VDKKIVRTEIGVL 102

Query: 190 GDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---- 244
             L H N++KL     E    + LV E +  G L    F R       I   +  G    
Sbjct: 103 LRLSHPNIIKLKEIF-ETPTEISLVLELVTGGEL----FDR-------I---VEKGYYSE 147

Query: 245 --AAK-------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
             AA         +A+LHE     +++RD K  N+L  A  A                  
Sbjct: 148 RDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLY-ATPAP----------------- 186

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
               D   K++DFGL+K             V GT GY APE +         D++S G++
Sbjct: 187 ----DAPLKIADFGLSKIVEHQVLM---KTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------Q 409
              +L G                    P   ER     +    L   +            
Sbjct: 240 TYILLCGF------------------EPFYDERGD-QFMFRRILNCEYYFISPWWDEVSL 280

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVE 434
            A  L    +  DPK R    + ++
Sbjct: 281 NAKDLVRKLIVLDPKKRLTTFQALQ 305

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 64.9 bits (158), Expect = 1e-11
 Identities = 42/278 (15%), Positives = 80/278 (28%), Gaps = 63/278 (22%)

Query: 212 LVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI 270
           +V+E +    L   + +     LP     KI     +GL +LH +    +I+ D K  NI
Sbjct: 122 MVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENI 178

Query: 271 LL------------------------DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           LL                         +  A +        +          +    K++
Sbjct: 179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIA 238

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           D G A    +     + TR      Y + E ++     + +D++S   +  E+ TG    
Sbjct: 239 DLGNACWVHKHFTEDIQTRQ-----YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLF 293

Query: 367 DKNRPNGEHN-------------------LVEWARPHL-----GERRRFYRLIDPRLEG- 401
           + +                          +V            G+ +   +L    L   
Sbjct: 294 EPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353

Query: 402 -----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                 +S + A          L   P+ R   +E + 
Sbjct: 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 53/235 (22%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
           LG+G F  V +          VK   G   A   +N   L    H++   E      L H
Sbjct: 19  LGKGAFSVVRRC---------VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR-----MKIALGAAKG 248
            N+V+L    I ++    L+++ +  G L   +  R     +S       ++  L A   
Sbjct: 70  PNIVRLHDS-ISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEA--- 122

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           +   H+     V++R+ K  N+LL A + +                         KL+DF
Sbjct: 123 VLHCHQ---MGVVHRNLKPENLLL-ASKLK---------------------GAAVKLADF 157

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTG 362
           GLA +  EG++        GT GY +PE V+         D+++ GV+L  +L G
Sbjct: 158 GLAIE-VEGEQQAWFGFA-GTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVG 209

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 66/320 (20%), Positives = 99/320 (30%), Gaps = 81/320 (25%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
            +     +G G FG                  T   VAVK +         E +  E+  
Sbjct: 21  RYDFVKDIGSGNFGVARLM---------RDKLTKELVAVKYIERGAAI--DENVQREIIN 69

Query: 189 LGDLVHLNLVKLIGY-CIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
              L H N+V+      I     L ++ E+   G L   +           R        
Sbjct: 70  HRSLRHPNIVRF--KEVILTPTHLAIIMEYASGGELYERICNAG-------RFSEDEARF 120

Query: 247 K------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                  G+++ H      + +RD K  N LLD   A                       
Sbjct: 121 FFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAP---------------------- 155

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL--TSRSDVYSFGVVLLE 358
              K+ DFG +K      +    + V GT  Y APE V+         +DV+S GV L  
Sbjct: 156 -RLKICDFGYSKSSVLHSQPK--STV-GTPAYIAPE-VLLRQEYDGKIADVWSCGVTLYV 210

Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
           ML G    +   P    +            R+  + I   L   +SI    + +    H 
Sbjct: 211 MLVGAYPFE--DPEEPRDY-----------RKTIQRI---LSVKYSIPDDIRISPECCHL 254

Query: 419 LSR----DPKARPLMSEVVE 434
           +SR    DP  R  + E+  
Sbjct: 255 ISRIFVADPATRISIPEIKT 274

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 62.9 bits (153), Expect = 8e-11
 Identities = 52/247 (21%), Positives = 87/247 (35%), Gaps = 58/247 (23%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
            + ++    +G G  G V                    VA+K L+         K    E
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAA---------YDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 111

Query: 186 VNFLGDLVHLNLVKLI-----GYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRM 239
           +  +  + H N++ L+        +E+ Q + LV E M   +    + +  L      RM
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM--DANLCQVIQMEL---DHERM 166

Query: 240 KIAL-GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
              L     G+  LH      +I+RD K SNI++ +                        
Sbjct: 167 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKS------------------------ 199

Query: 299 QDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
            D   K+ DFGLA+          +V TR      Y APE ++        D++S G ++
Sbjct: 200 -DCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMGYKENVDIWSVGCIM 253

Query: 357 LEMLTGR 363
            EM+  +
Sbjct: 254 GEMVRHK 260

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.7 bits (154), Expect = 9e-11
 Identities = 59/364 (16%), Positives = 119/364 (32%), Gaps = 75/364 (20%)

Query: 79  TSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFT---FNDLKLATRNFRPE- 134
           T+R +     +S+ TT++   +  +  L  + +V S L K+      DL        P  
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPD-EVKSLLLKYLDCRPQDLPREVLTTNPRR 329

Query: 135 -SLLGEG--GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD 191
            S++ E        +  W   N     K  T +  ++  L     +   + L+ V F   
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCD---KLTTIIESSLNVLEPAEYRKMFDRLS-V-FPPS 384

Query: 192 LVHLN---LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
             H+    L  +    I+ D  ++V +      +E      ++ +P SI +++     + 
Sbjct: 385 -AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP-SIYLEL-KVKLEN 441

Query: 249 LAFLHEEA-ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG-------------LFFN 294
              LH    +   I + F + +++      + Y    F  + G             LF  
Sbjct: 442 EYALHRSIVDHYNIPKTFDSDDLIPP--YLDQY----FYSHIGHHLKNIEHPERMTLF-- 493

Query: 295 NMLFQDYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
            M+F D+     K+     A +   G   +   ++   Y           ++      Y 
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNAS-GSILNTLQQLK-FYK---------PYICDNDPKYE 542

Query: 352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL--EGHFSIKGAQ 409
                  ++    ++    P  E NL+           ++  L+   L  E     + A 
Sbjct: 543 ------RLV---NAILDFLPKIEENLI---------CSKYTDLLRIALMAEDEAIFEEAH 584

Query: 410 KAAQ 413
           K  Q
Sbjct: 585 KQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 1e-07
 Identities = 44/288 (15%), Positives = 86/288 (29%), Gaps = 94/288 (32%)

Query: 25  KKKKVEDEVEVEEEEETGCWVKLRFFGSCISSRSK-VDSSVSG----------TSTHYES 73
            K++++  +  ++         LR F + +S + + V   V            +    E 
Sbjct: 47  SKEEIDHIIMSKDAVSG----TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102

Query: 74  KSTNDTSRDQPAAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRP 133
           +        QP+          +   N +  ++  +  V SRL+ +    L+ A    RP
Sbjct: 103 R--------QPSMMTRMYIEQRDRLYNDN--QVFAKYNV-SRLQPYL--KLRQALLELRP 149

Query: 134 ESLL---GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE----WLAEV 186
              +   G  G G   K W                VA+       +Q   +    WL   
Sbjct: 150 AKNVLIDGVLGSG---KTW----------------VALDVCLSYKVQCKMDFKIFWLN-- 188

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-----LVYEFMPRG-SLENHLFRRSLPLPWSIRMK 240
                         +  C   +  L     L+Y+  P   S  +H     L +       
Sbjct: 189 --------------LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS----- 229

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR-AENYGKFGF-C 286
                      +  E  R +  + ++   ++L  V+ A+ +  F   C
Sbjct: 230 -----------IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 56/267 (20%), Positives = 95/267 (35%), Gaps = 65/267 (24%)

Query: 116 LRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG 175
           +    F+        +     LG GG G VF           V       VA+K +    
Sbjct: 2   MNIHGFD----LGSRYMDLKPLGCGGNGLVFSA---------VDNDCDKRVAIKKIVLTD 48

Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLI-------------GYCIEDDQRL-LVYEFMPRGS 221
            Q  K  L E+  +  L H N+VK+                 + +   + +V E+M    
Sbjct: 49  PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM---- 104

Query: 222 LENHLFR--RSLPLPWSIRMK-IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
            E  L       PL      +       +GL ++H  A   V++RD K +N+ ++     
Sbjct: 105 -ETDLANVLEQGPLL-EEHARLFMYQLLRGLKYIHS-AN--VLHRDLKPANLFINT---- 155

Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK-DGPEGDKTHVSTRVMGTYGYAAPEY 337
                               +D   K+ DFGLA+   P        +  + T  Y +P  
Sbjct: 156 --------------------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195

Query: 338 VMT-GHLTSRSDVYSFGVVLLEMLTGR 363
           +++  + T   D+++ G +  EMLTG+
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 50/263 (19%), Positives = 89/263 (33%), Gaps = 80/263 (30%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----------- 184
            +G+G +G V                     A+K L+   L     +             
Sbjct: 20  EIGKGSYGVVKLA---------YNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAP 70

Query: 185 ---------------EVNFLGDLVHLNLVKLIGYCI----EDDQRLLVYEFMPRGSLENH 225
                          E+  L  L H N+VKL    +     +D   +V+E + +G +   
Sbjct: 71  GGCIQPRGPIEQVYQEIAILKKLDHPNVVKL--VEVLDDPNEDHLYMVFELVNQGPVMEV 128

Query: 226 LFRRSLPLPWSIRM--KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
              + L    +      +  G    + +LH    + +I+RD K SN+L+           
Sbjct: 129 PTLKPLSEDQARFYFQDLIKG----IEYLHY---QKIIHRDIKPSNLLVGE--------- 172

Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
                           D + K++DFG++ +  +G    +S  V GT  + APE +     
Sbjct: 173 ----------------DGHIKIADFGVSNE-FKGSDALLSNTV-GTPAFMAPESLSETRK 214

Query: 344 T---SRSDVYSFGVVLLEMLTGR 363
                  DV++ GV L   + G+
Sbjct: 215 IFSGKALDVWAMGVTLYCFVFGQ 237

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 60.4 bits (147), Expect = 4e-10
 Identities = 55/256 (21%), Positives = 89/256 (34%), Gaps = 65/256 (25%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW----- 182
              +  +  +  G +G V                 G+ VA+K + +    G         
Sbjct: 21  QSPYTVQRFISSGSYGAVCA----------GVDSEGIPVAIKRVFNTVSDGRTVNILSDS 70

Query: 183 ------LAEVNFLGDLVHLNLVKL----IGYCIEDDQRL-LVYEFMPRGSLENHLFRRSL 231
                 L E+  L    H N++ L    + +      +L LV E M    L   +  + +
Sbjct: 71  FLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRI 129

Query: 232 PLPWSIRMK-IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
            +     ++        GL  LHE A   V++RD    NILL                  
Sbjct: 130 VIS-PQHIQYFMYHILLGLHVLHE-AG--VVHRDLHPGNILLAD---------------- 169

Query: 291 LFFNNMLFQDYNAKLSDFGLA-KDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRS 347
                    + +  + DF LA +D  + +KT +V+ R      Y APE VM     T   
Sbjct: 170 ---------NNDITICDFNLAREDTADANKTHYVTHRW-----YRAPELVMQFKGFTKLV 215

Query: 348 DVYSFGVVLLEMLTGR 363
           D++S G V+ EM   +
Sbjct: 216 DMWSAGCVMAEMFNRK 231

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 59.7 bits (145), Expect = 8e-10
 Identities = 55/247 (22%), Positives = 89/247 (36%), Gaps = 58/247 (23%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
            + ++    +G G  G V                    VA+K L+         K    E
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAA---------YDAILERNVAIKKLSRPFQNQTHAKRAYRE 74

Query: 186 VNFLGDLVHLNLVKLI-----GYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRM 239
           +  +  + H N++ L+        +E+ Q + +V E M   +L   + +  L      RM
Sbjct: 75  LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANL-CQVIQMEL---DHERM 129

Query: 240 KIAL-GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
              L     G+  LH      +I+RD K SNI++ +                        
Sbjct: 130 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKS------------------------ 162

Query: 299 QDYNAKLSDFGLA-KDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
            D   K+ DFGLA   G     T +V TR      Y APE ++        D++S G ++
Sbjct: 163 -DCTLKILDFGLARTAGTSFMMTPYVVTRY-----YRAPEVILGMGYKENVDIWSVGCIM 216

Query: 357 LEMLTGR 363
            EM+ G 
Sbjct: 217 GEMIKGG 223

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 79/257 (30%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
            + +   + +G G +G V            +   +G  VA+K L+         K    E
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSA---------IDKRSGEKVAIKKLSRPFQSEIFAKRAYRE 73

Query: 186 VNFLGDLVHLNLVKLI-----GYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRM 239
           +  L  + H N++ L+        + +     LV  FM     +  L +        + +
Sbjct: 74  LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-----QTDLQK-------IMGL 121

Query: 240 KIA-----------LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
           K +           L   KGL ++H  A   V++RD K  N+ ++               
Sbjct: 122 KFSEEKIQYLVYQML---KGLKYIHS-AG--VVHRDLKPGNLAVNE-------------- 161

Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMT-GHLTSR 346
                      D   K+ DFGLA+   + + T  V TR    + Y APE +++  H    
Sbjct: 162 -----------DCELKILDFGLAR-HADAEMTGYVVTR----W-YRAPEVILSWMHYNQT 204

Query: 347 SDVYSFGVVLLEMLTGR 363
            D++S G ++ EMLTG+
Sbjct: 205 VDIWSVGCIMAEMLTGK 221

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 60/248 (24%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
              ++  S +G G +G V   +  +         TGL VAVK L+     +   K    E
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTK---------TGLRVAVKKLSRPFQSIIHAKRTYRE 78

Query: 186 VNFLGDLVHLNLVKLI-----GYCIEDDQRL-LVYEFMPRGSLENHLFR--RSLPLPWSI 237
           +  L  + H N++ L+        +E+   + LV   M        L    +   L    
Sbjct: 79  LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDH 133

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
              +     +GL ++H  A+  +I+RD K SN+ ++                        
Sbjct: 134 VQFLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNE----------------------- 167

Query: 298 FQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV 355
             D   K+ DFGLA+     + T +V+TR      Y APE ++   H     D++S G +
Sbjct: 168 --DCELKILDFGLAR-HTADEMTGYVATRW-----YRAPEIMLNWMHYNQTVDIWSVGCI 219

Query: 356 LLEMLTGR 363
           + E+LTGR
Sbjct: 220 MAELLTGR 227

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 66/266 (24%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH 194
             LG G F  V+      N T          VA+K +  D     +    E+  L  +  
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNT---------HVAMKIVRGDK-VYTEAAEDEIKLLQRVND 74

Query: 195 LNLVKLIG----YCIEDDQRLLVYEFMPRGSLENHLF------RRSL----------PLP 234
            +  K       + +    +LL + F  +G    H+         +L           +P
Sbjct: 75  ADNTKEDSMGANHIL----KLLDH-FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIP 129

Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
                +I+     GL ++H      +I+ D K  N+L++ V +                 
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPE--------------- 172

Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
                    K++D G A    E     + TR      Y +PE ++       +D++S   
Sbjct: 173 ----NLIQIKIADLGNACWYDEHYTNSIQTRE-----YRSPEVLLGAPWGCGADIWSTAC 223

Query: 355 VLLEMLTGR-----RSMDKNRPNGEH 375
           ++ E++TG              + +H
Sbjct: 224 LIFELITGDFLFEPDEGHSYTKDDDH 249

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 56/247 (22%), Positives = 86/247 (34%), Gaps = 51/247 (20%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEWLAEVNFLGDLV 193
             +G+G FG V      +N             AVK + N       +    E + L  + 
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKK---------YYAVKVVRNIKKY--TRSAKIEADILKKIQ 89

Query: 194 HL-----NLVKLIGY-------CI--EDDQRLL---VYEFMPRGSLENHLFRRSLPLPWS 236
           +      N+VK  G        C+  E     L   +YE      +  + +         
Sbjct: 90  NDDINNNNIVKYHGKFMYYDHMCLIFE----PLGPSLYEI-----ITRNNYN---GFHIE 137

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
                 +   K L +L + +   + + D K  NILLD    E        +  G      
Sbjct: 138 DIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY 194

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVV 355
             +    KL DFG A    +   + ++TR      Y APE V+       S D++SFG V
Sbjct: 195 RTKSTGIKLIDFGCATFKSDYHGSIINTRQ-----YRAPE-VILNLGWDVSSDMWSFGCV 248

Query: 356 LLEMLTG 362
           L E+ TG
Sbjct: 249 LAELYTG 255

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 58/248 (23%), Positives = 92/248 (37%), Gaps = 60/248 (24%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
              +R    +G G +G V            V   TG  VA+K L          K    E
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSA---------VDGRTGAKVAIKKLYRPFQSELFAKRAYRE 74

Query: 186 VNFLGDLVHLNLVKLI-----GYCIEDDQRL-LVYEFMPRGSLENHLFR--RSLPLPWSI 237
           +  L  + H N++ L+        ++D     LV  FM        L +  +   L    
Sbjct: 75  LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-----GTDLGKLMKHEKLGEDR 129

Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
              +     KGL ++H  A   +I+RD K  N+ ++                        
Sbjct: 130 IQFLVYQMLKGLRYIHA-AG--IIHRDLKPGNLAVNE----------------------- 163

Query: 298 FQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV 355
             D   K+ DFGLA+   + + T +V TR      Y APE ++     T   D++S G +
Sbjct: 164 --DCELKILDFGLAR-QADSEMTGYVVTRW-----YRAPEVILNWMRYTQTVDIWSVGCI 215

Query: 356 LLEMLTGR 363
           + EM+TG+
Sbjct: 216 MAEMITGK 223

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 43/263 (16%), Positives = 77/263 (29%), Gaps = 67/263 (25%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG----------LQG 178
           R ++ +S       G +++     +             ++K    DG             
Sbjct: 42  RQWKLKSFQTRDNQGILYEA-APTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAA 100

Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGY-CIEDDQRLLVYEFMPR--GSLENHLFRRSLPLPW 235
               + +   L     L +   +G+   +D  R LV   +P    SL+      S     
Sbjct: 101 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLV---LPSLGRSLQ-SALDVSPKHVL 156

Query: 236 SIRM--KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
           S R   ++A      L FLH   E   ++ +    NI +                     
Sbjct: 157 SERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV-----------------DPED 196

Query: 294 NNMLFQDYNAKLSDFGLAK---DGPEGDKTHVSTR------VMGTYGYAAPEYVMTGHL- 343
            + +       L+ +G A            HV+          G   + +    M  H  
Sbjct: 197 QSQVT------LAGYGFAFRYCP----SGKHVAYVEGSRSPHEGDLEFIS----MDLHKG 242

Query: 344 ---TSRSDVYSFGVVLLEMLTGR 363
              + RSD+ S G  +L+ L G 
Sbjct: 243 CGPSRRSDLQSLGYCMLKWLYGF 265

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 60/250 (24%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
              +   S +GEG +G V                  + VA+K ++  +     +  L E+
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSA---------YDNLNKVRVAIKKISPFEHQTYCQRTLREI 76

Query: 187 NFLGDLVHLNLVKLIG----YCIEDDQRL-LVYEFMPRGSLENHLFR--RSLPLPWSIRM 239
             L    H N++ +        IE  + + +V + M     E  L++  ++  L  +  +
Sbjct: 77  KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLS-NDHI 130

Query: 240 KI----ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
                  L   +GL ++H  A   V++RD K SN+LL+                      
Sbjct: 131 CYFLYQIL---RGLKYIHS-AN--VLHRDLKPSNLLLNT--------------------- 163

Query: 296 MLFQDYNAKLSDFGLAK-DGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFG 353
                 + K+ DFGLA+   P+ D T   T  + T  Y APE ++     T   D++S G
Sbjct: 164 ----TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219

Query: 354 VVLLEMLTGR 363
            +L EML+ R
Sbjct: 220 CILAEMLSNR 229

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 51/300 (17%), Positives = 96/300 (32%), Gaps = 70/300 (23%)

Query: 90  SSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGW 149
                     +S+   L E+  V   +              ++    +G+GGFGC++   
Sbjct: 3   RVKAAQAGRQSSAKRHLAEQFAVGEIITDMAAA-------AWKVGLPIGQGGFGCIYLAD 55

Query: 150 IEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----LAEVNFLGDLVHLNLVKLIG-- 202
           +  +       G+     VK    D      E       A+   +   +    +K +G  
Sbjct: 56  MNSSE----SVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111

Query: 203 ---YCIEDDQRLLVYEF--MPR--GSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
                   D+    Y F  M R    L+  ++    +      ++   ++L     L ++
Sbjct: 112 KYWGSGLHDKNGKSYRFMIMDRFGSDLQ-KIYEANAKRFSRK-TVLQ-LSLRILDILEYI 168

Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
           H   E   ++ D K SN+LL                      + ++      L D+GLA 
Sbjct: 169 H---EHEYVHGDIKASNLLL-----------------NYKNPDQVY------LVDYGLAY 202

Query: 313 D-GPEGDKTHVSTR----VMGTYGYAAPEYVMTGHL----TSRSDVYSFGVVLLEMLTGR 363
              PEG     +        GT  + +    +  H     + R D+   G  +++ LTG 
Sbjct: 203 RYCPEGVHKAYAADPKRCHDGTIEFTS----IDAHNGVAPSRRGDLEILGYCMIQWLTGH 258

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 54.3 bits (131), Expect = 4e-08
 Identities = 62/265 (23%), Positives = 86/265 (32%), Gaps = 59/265 (22%)

Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGL 176
                D  L  R +     LGEG FG V +                  VA+K + N    
Sbjct: 10  VCRIGDW-LQER-YEIVGNLGEGTFGKVVECLDHAR--------GKSQVALKIIRNVGKY 59

Query: 177 QGHKEWLAEVNFLGDLVHL------NLVKLIGY-------CI--EDDQRLL---VYEFMP 218
              +    E+N L  +           V +  +       CI  E    LL    +EF  
Sbjct: 60  --REAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE----LLGKNTFEF-- 111

Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
              L+ + F+   P P      +A      L FLHE     + + D K  NIL      E
Sbjct: 112 ---LKENNFQ---PYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFE 162

Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
                          N  +      +++DFG A    E   T V+TR      Y  PE V
Sbjct: 163 TLYNEHKSCEEKSVKNTSI------RVADFGSATFDHEHHTTIVATRH-----YRPPE-V 210

Query: 339 MTGHL-TSRSDVYSFGVVLLEMLTG 362
           +         DV+S G +L E   G
Sbjct: 211 ILELGWAQPCDVWSIGCILFEYYRG 235

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 53.4 bits (129), Expect = 7e-08
 Identities = 65/265 (24%), Positives = 97/265 (36%), Gaps = 59/265 (22%)

Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGL 176
                D+ L+ R +     LGEG FG V +    + G        G  VAVK + N D  
Sbjct: 5   ICQSGDV-LSAR-YEIVDTLGEGAFGKVVECIDHKAG--------GRHVAVKIVKNVDRY 54

Query: 177 QGHKEWLAEVNFLGDLVHL------NLVKLIGY-------CI--EDDQRLL---VYEFMP 218
              +   +E+  L  L           V+++ +       CI  E    LL    Y+F  
Sbjct: 55  --CEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE----LLGLSTYDF-- 106

Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
              ++ + F    P       K+A    K + FLH      + + D K  NIL       
Sbjct: 107 ---IKENGFL---PFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILF------ 151

Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
               +       +  +     + + K+ DFG A    E   T VSTR      Y APE V
Sbjct: 152 VQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH-----YRAPE-V 205

Query: 339 MTGHL-TSRSDVYSFGVVLLEMLTG 362
           +     +   DV+S G +L+E   G
Sbjct: 206 ILALGWSQPCDVWSIGCILIEYYLG 230

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 53.4 bits (129), Expect = 7e-08
 Identities = 56/257 (21%), Positives = 96/257 (37%), Gaps = 67/257 (26%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
           + +F+ +SLLGEG +G V                TG  VA+K +   D        L E+
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSA---------THKPTGEIVAIKKIEPFDKPLFALRTLREI 60

Query: 187 NFLGDLVHLNLVKLI----GYCIEDDQRL-LVYEFMPRGSLENHLFR--RSLPLPWSIRM 239
             L    H N++ +         E+   + ++ E M     +  L R   +  L     +
Sbjct: 61  KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-----QTDLHRVISTQMLS-DDHI 114

Query: 240 KI----ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
           +      L   + +  LH  +   VI+RD K SN+L+++                     
Sbjct: 115 QYFIYQTL---RAVKVLHG-SN--VIHRDLKPSNLLINS--------------------- 147

Query: 296 MLFQDYNAKLSDFGLA----KDGPEGDKTHVSTRVMGTY----GYAAPEYVMTGHL-TSR 346
               + + K+ DFGLA    +   +  +       M  +     Y APE ++T    +  
Sbjct: 148 ----NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRA 203

Query: 347 SDVYSFGVVLLEMLTGR 363
            DV+S G +L E+   R
Sbjct: 204 MDVWSCGCILAELFLRR 220

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 54/250 (21%), Positives = 91/250 (36%), Gaps = 61/250 (24%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVN 187
           +++    +GEG FG +F+G                 VA+K      D  Q   E+     
Sbjct: 11  HYKVGRRIGEGSFGVIFEG---------TNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKL 61

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALG 244
             G      +  +  +  E    +LV + +   SLE  L     R   +  ++ M  A  
Sbjct: 62  LAG---CTGIPNVYYFGQEGLHNVLVIDLLGP-SLE-DLLDLCGRKFSVK-TVAM-AAKQ 114

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
               +  +H   E+ ++YRD K  N L+    ++N               NM++      
Sbjct: 115 MLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKN--------------ANMIY------ 151

Query: 305 LSDFGLAK---DGPEGDKTHVSTR----VMGTYGYAAPEYVMTGHL----TSRSDVYSFG 353
           + DFG+ K   D     K H+  R    + GT  Y +    +  HL    + R D+ + G
Sbjct: 152 VVDFGMVKFYRDP--VTKQHIPYREKKNLSGTARYMS----INTHLGREQSRRDDLEALG 205

Query: 354 VVLLEMLTGR 363
            V +  L G 
Sbjct: 206 HVFMYFLRGS 215

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 54/248 (21%), Positives = 90/248 (36%), Gaps = 73/248 (29%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEWLAEVNFLGDLV 193
            ++G+G FG V K +  +             VA+K + N      H++   E+  L  L 
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQ---------HVALKMVRNEKRF--HRQAAEEIRILEHLR 151

Query: 194 HL------NLVKLIGY-------CI--EDDQRLL---VYEFMPRGSLENHLFRRSLPLPW 235
                   N++ ++         C+  E    LL   +YE + +         +   LP 
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFE----LLSMNLYELIKKNKF------QGFSLP- 200

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
            +R K A    + L  LH+     +I+ D K  NILL                       
Sbjct: 201 LVR-KFAHSILQCLDALHKNR---IIHCDLKPENILL----------------------- 233

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
                   K+ DFG +    +   T++ +R      Y APE ++        D++S G +
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTYIQSRF-----YRAPEVILGARYGMPIDMWSLGCI 288

Query: 356 LLEMLTGR 363
           L E+LTG 
Sbjct: 289 LAELLTGY 296

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 53/340 (15%), Positives = 98/340 (28%), Gaps = 103/340 (30%)

Query: 85  AAAVISSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLAT-----RNFRPESLLGE 139
             A  +    S  +   S S+ E + +      K T +  +  +       +    L+G 
Sbjct: 4   HEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGT 63

Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-----EVNFLGDLVH 194
           G +G V +                  VA+K +                  E+  L  L H
Sbjct: 64  GSYGHVCEA---------YDKLEKRVVAIKKILRVF---EDLIDCKRILREIAILNRLNH 111

Query: 195 LNLVKL----IGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA--- 246
            ++VK+    I   +E    L +V E       ++   +         R  + L      
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIA-----DSDFKK-------LFRTPVYLTELHIK 159

Query: 247 -------KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
                   G+ ++H  A   +++RD K +N L++                          
Sbjct: 160 TLLYNLLVGVKYVHS-AG--ILHRDLKPANCLVNQ------------------------- 191

Query: 300 DYNAKLSDFGLA---------KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-------- 342
           D + K+ DFGLA                       ++        +  +TGH        
Sbjct: 192 DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRA 251

Query: 343 ----LTSRS-----DVYSFGVVLLEMLTGRRSMDKNRPNG 373
               L   +     DV+S G +  E+L   +       + 
Sbjct: 252 PELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 50.9 bits (122), Expect = 5e-07
 Identities = 57/266 (21%), Positives = 92/266 (34%), Gaps = 75/266 (28%)

Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-NHDGL 176
                +     R +  +SL+G+G FG V K +                VA+K + N    
Sbjct: 45  IVKNGEK-WMDR-YEIDSLIGKGSFGQVVKAYDRVEQE---------WVAIKIIKNKKAF 93

Query: 177 QGHKEWLAEVNFLGDLVHL------NLVKLIGY-------CI--EDDQRLL---VYEFMP 218
               +   EV  L  +          +V L  +       C+  E    +L   +Y+   
Sbjct: 94  --LNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE----MLSYNLYDL-- 145

Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
              L N  FR    +  ++  K A      L FL       +I+ D K  NILL      
Sbjct: 146 ---LRNTNFR---GVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILL-----C 193

Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
           N  +                     K+ DFG +    +    ++ +R      Y +PE V
Sbjct: 194 NPKRSAI------------------KIVDFGSSCQLGQRIYQYIQSRF-----YRSPE-V 229

Query: 339 MTGHLTSRS-DVYSFGVVLLEMLTGR 363
           + G     + D++S G +L+EM TG 
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGE 255

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 56/249 (22%), Positives = 86/249 (34%), Gaps = 59/249 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           NFR    +G G FG +  G             T   VA+K               E  F 
Sbjct: 10  NFRVGKKIGCGNFGELRLG---------KNLYTNEYVAIKLEPMKSRAPQLHL--EYRFY 58

Query: 190 GDLVH-LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGA 245
             L     + ++  +        +V E +   SLE  LF    R+  L  ++ M IA+  
Sbjct: 59  KQLGSGDGIPQVYYFGPCGKYNAMVLELLGP-SLE-DLFDLCDRTFSLK-TVLM-IAIQL 114

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              + ++H    + +IYRD K  N L+                 G   N      +   +
Sbjct: 115 ISRMEYVH---SKNLIYRDVKPENFLI-----------------GRPGNKTQQVIH---I 151

Query: 306 SDFGLAK---DGPEGDKTHVSTR----VMGTYGYAAPEYVMTGHL----TSRSDVYSFGV 354
            DF LAK   D     K H+  R    + GT  Y +    +  HL    + R D+ + G 
Sbjct: 152 IDFALAKEYIDP--ETKKHIPYREHKSLTGTARYMS----INTHLGKEQSRRDDLEALGH 205

Query: 355 VLLEMLTGR 363
           + +  L G 
Sbjct: 206 MFMYFLRGS 214

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 50.1 bits (120), Expect = 9e-07
 Identities = 54/283 (19%), Positives = 91/283 (32%), Gaps = 87/283 (30%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
             N+  + L+G G +G V+               T   VA+K +N   + L   K  L E
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLA---------YDKNTEKNVAIKKVNRMFEDLIDCKRILRE 75

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-----LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           +  L  L    +++L    I DD        +V E       ++ L +         +  
Sbjct: 76  ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-----DSDLKK-------LFKTP 123

Query: 241 IALGAA----------KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
           I L              G  F+HE +   +I+RD K +N LL+                 
Sbjct: 124 IFLTEEHIKTILYNLLLGENFIHE-SG--IIHRDLKPANCLLNQ---------------- 164

Query: 291 LFFNNMLFQDYNAKLSDFGLA----KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
                    D + K+ DFGLA     +        +             +  +T H+ +R
Sbjct: 165 ---------DCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR 215

Query: 347 -----------------SDVYSFGVVLLEMLTGRRSMDKNRPN 372
                             D++S G +  E+L   +S   +  N
Sbjct: 216 WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 56/247 (22%), Positives = 87/247 (35%), Gaps = 57/247 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
            +R    +G G FG ++ G     G           VA+K         H +   E    
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGE---------EVAIKLECVK--TKHPQLHIESKIY 58

Query: 190 GDLVHLNLV-KLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGA 245
             +     +  +     E D  ++V E +   SLE  LF    R   L  ++ + +A   
Sbjct: 59  KMMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SLE-DLFNFCSRKFSLK-TVLL-LADQM 114

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              + ++H    +  I+RD K  N L+        GK G  +Y                +
Sbjct: 115 ISRIEYIH---SKNFIHRDVKPDNFLMG------LGKKGNLVY----------------I 149

Query: 306 SDFGLAKD-GPEGDKTHVSTR----VMGTYGYAAPEYVMTGHL----TSRSDVYSFGVVL 356
            DFGLAK         H+  R    + GT  YA+    +  HL    + R D+ S G VL
Sbjct: 150 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS----INTHLGIEQSRRDDLESLGYVL 205

Query: 357 LEMLTGR 363
           +    G 
Sbjct: 206 MYFNLGS 212

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 47.4 bits (113), Expect = 7e-06
 Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 71/264 (26%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAE 185
            R +     LG+G +G V+K          +   TG  VAVK +          +    E
Sbjct: 8   LRKYELVKKLGKGAYGIVWKS---------IDRRTGEVVAVKKIFDAFQNSTDAQRTFRE 58

Query: 186 VNFLGDL-VHLNLVKLIGYCI-EDDQRL-LVYEFMPRGSLENHLFR--RSLPLPWSIRMK 240
           +  L +L  H N+V L+     ++D+ + LV+++M     E  L    R+  L   +  +
Sbjct: 59  IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILE-PVHKQ 112

Query: 241 -IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            +     K + +LH      +++RD K SNILL+A                         
Sbjct: 113 YVVYQLIKVIKYLHS-GG--LLHRDMKPSNILLNA------------------------- 144

Query: 300 DYNAKLSDFGLA---KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------------LT 344
           + + K++DFGL+    +          +    T  +   + ++T +            L 
Sbjct: 145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204

Query: 345 SRS-----DVYSFGVVLLEMLTGR 363
           S       D++S G +L E+L G+
Sbjct: 205 STKYTKGIDMWSLGCILGEILCGK 228

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 47.2 bits (111), Expect = 8e-06
 Identities = 46/292 (15%), Positives = 75/292 (25%), Gaps = 80/292 (27%)

Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           +   S+     F+   L T   +    +GEG FG VF+                  VA+K
Sbjct: 2   MGECSQKGPVPFSHC-LPTEKLQRCEKIGEGVFGEVFQTIA-----------DHTPVAIK 49

Query: 170 TLNHDGLQGH--------KEWLAEVNFLGDLVHL---------NLVKLIGYCI------- 205
            +  +G            +E L E+    +L  L           + L            
Sbjct: 50  IIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPP 109

Query: 206 -----------------------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
                                  +DDQ  +V EF   G     +  +      +    I 
Sbjct: 110 LLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK--LSSLATAKSIL 167

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN--YGKFGFCIYYGLFFNNMLFQD 300
                 LA           +RD    N+LL     +   Y   G                
Sbjct: 168 HQLTASLAVAEASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSC-------G 218

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
               + D+ L++             V      +  E + TG    + D+Y  
Sbjct: 219 LQVSIIDYTLSRL------ERDGIVVF--CDVSMDEDLFTGDGDYQFDIYRL 262

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 46.6 bits (111), Expect = 9e-06
 Identities = 42/261 (16%), Positives = 83/261 (31%), Gaps = 66/261 (25%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-----L 183
             +     +G GGFG ++  +                  VK    +      E      +
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKP------EKDARHVVKVEYQENGPLFSELKFYQRV 90

Query: 184 AEVNFLGDLVHLNLVKLIG-----YC-----IEDDQRLLVYEFMPR--GSLENHLFRRSL 231
           A+ + +   +    +  +G                 R +V   M R    L+  +  ++ 
Sbjct: 91  AKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV---MERLGIDLQ-KISGQNG 146

Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
               S  +++ +     L ++H   E   ++ D K +N+LL                 G 
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLL-----------------GY 186

Query: 292 FFNNMLFQDYNAKLSDFGLAKD-GPEGDKTHVSTRV----MGTYGYAAPEYVMTGHL--- 343
              + ++      L+D+GL+    P G+             GT  + +    +  H    
Sbjct: 187 KNPDQVY------LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS----LDAHKGVA 236

Query: 344 -TSRSDVYSFGVVLLEMLTGR 363
            + RSDV   G  +L  L G+
Sbjct: 237 LSRRSDVEILGYCMLRWLCGK 257

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 56/325 (17%), Positives = 95/325 (29%), Gaps = 121/325 (37%)

Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HL 195
           LG G  G V +              T    A+K L         +   EV          
Sbjct: 26  LGLGINGKVLQI---------FNKRTQEKFALKMLQD-----CPKARREVELHWRASQCP 71

Query: 196 NLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG-----A 245
           ++V+++    E+        L+V E +  G  E  LF R       I+ +         A
Sbjct: 72  HIVRIVDVY-ENLYAGRKCLLIVMECLDGG--E--LFSR-------IQDRGDQAFTEREA 119

Query: 246 A-------KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
           +       + + +LH      + +RD K  N+L  +                        
Sbjct: 120 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTS------------------------ 152

Query: 299 QDYNA--KLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVV 355
           +  NA  KL+DFG A    E           G  Y  +              D++S GV+
Sbjct: 153 KRPNAILKLTDFGFA---KE---------TTGEKYDKSC-------------DMWSLGVI 187

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA------Q 409
           +  +L G        P        ++   L         I     G +           +
Sbjct: 188 MYILLCGY------PPF-------YSNHGLAISPGMKTRI---RMGQYEFPNPEWSEVSE 231

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVE 434
           +   L  + L  +P  R  ++E + 
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMN 256

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 60/247 (24%), Positives = 90/247 (36%), Gaps = 57/247 (23%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
            FR    +G G FG ++ G   +             VA+K  N      H + L E    
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNE---------EVAIKLENVK--TKHPQLLYESKIY 56

Query: 190 GDLVHLNLV-KLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGA 245
             L     +  +  + +E D  +LV + +   SLE  LF    R L L  ++ M +A   
Sbjct: 57  RILQGGTGIPNVRWFGVEGDYNVLVMDLLGP-SLE-DLFNFCSRKLSLK-TVLM-LADQM 112

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              + F+H    +  ++RD K  N L+   R  N                         +
Sbjct: 113 INRVEFVH---SKSFLHRDIKPDNFLMGLGRRAN----------------------QVYI 147

Query: 306 SDFGLAKD-GPEGDKTHVSTR----VMGTYGYAAPEYVMTGHL----TSRSDVYSFGVVL 356
            DFGLAK         H+  R    + GT  YA+    +  HL    + R D+ S G VL
Sbjct: 148 IDFGLAKKYRDTSTHQHIPYRENKNLTGTARYAS----VNTHLGIEQSRRDDLESLGYVL 203

Query: 357 LEMLTGR 363
           +  L G 
Sbjct: 204 MYFLRGS 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	511
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.98
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.85
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.73
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.4
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.19
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.13
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.0
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.61
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.48
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.43
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.41
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.35
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.24
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.23
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.03
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.8
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.6
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.39
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.37
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.09
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.07
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.97
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.91
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.88
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.81
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.61
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.51
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.32
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.05
3mes_A	424	Choline kinase; malaria, structural genomics, stru	93.64
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.42
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.91
2khx_A	85	Ribonuclease 3; drosha, RNA binding domain, hydrol	80.29

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=7.4e-61  Score=472.15  Aligned_cols=262  Identities=30%  Similarity=0.443  Sum_probs=213.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|.+.+.||+|+||+||+|++....    ...++..||||+++.......++|.+|+++|++|+|||||+++|+|.+++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~----~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLC----PEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC--------CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcc----cCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            57888899999999999999986421    12357899999998766555678999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          209 QRLLVYEFMPRGSLENHLFRR------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      .+|||||||++|+|.++|...            ...+++..++.|+.||+.||+|||+++   ||||||||+||||+   
T Consensus        89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~---  162 (299)
T 4asz_A           89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVG---  162 (299)
T ss_dssp             SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC---
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEEC---
Confidence            999999999999999999653            246999999999999999999999988   99999999999998   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHH
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil  356 (511)
                                            .++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||+|
T Consensus       163 ----------------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl  220 (299)
T 4asz_A          163 ----------------------ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL  220 (299)
T ss_dssp             ----------------------GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             ----------------------CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence                                  4788999999999876554433333345799999999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |||+| |+.||.+....   .+...+...    .          ....+..+++++.+||.+||+.||++||||.+|++.
T Consensus       221 ~Ellt~G~~Pf~~~~~~---~~~~~i~~~----~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~  283 (299)
T 4asz_A          221 WEIFTYGKQPWYQLSNN---EVIECITQG----R----------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTL  283 (299)
T ss_dssp             HHHHTTTCCTTTTSCHH---HHHHHHHHT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCHH---HHHHHHHcC----C----------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999 89999764321   222111110    0          111223346789999999999999999999999998


Q ss_pred             hcCC
Q 010432          436 LKPL  439 (511)
Q Consensus       436 L~~l  439 (511)
                      |+.+
T Consensus       284 L~~~  287 (299)
T 4asz_A          284 LQNL  287 (299)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8755

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.3e-60  Score=473.81  Aligned_cols=263  Identities=28%  Similarity=0.435  Sum_probs=207.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|.+.++||+|+||+||+|+++..    ....++..||||+++.......++|.+|+++|++|+|||||+++|+|.+++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~----~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNL----LPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSS----CC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCc----ccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            4677788999999999999998641    112367899999998766555678999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          209 QRLLVYEFMPRGSLENHLFRR--------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~--------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                      .+|||||||++|+|.++|...              ..++++..++.|+.||+.||+|||+++   ||||||||+||||+ 
T Consensus       117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~-  192 (329)
T 4aoj_A          117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVG-  192 (329)
T ss_dssp             SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE-
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEEC-
Confidence            999999999999999999653              235899999999999999999999988   99999999999998 


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHH
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV  354 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGv  354 (511)
                                              +++.+||+|||+|+...........+..+||+.|||||++.+..|+.++|||||||
T Consensus       193 ------------------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gv  248 (329)
T 4aoj_A          193 ------------------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV  248 (329)
T ss_dssp             ------------------------TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             ------------------------CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHH
Confidence                                    47889999999999776554444455678999999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          355 VLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       355 il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      +||||+| |+.||......   .+...+..    ..          ....+..+++++.+||.+||+.||++||||.||+
T Consensus       249 vl~Ellt~G~~Pf~~~~~~---~~~~~i~~----g~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~  311 (329)
T 4aoj_A          249 VLWEIFTYGKQPWYQLSNT---EAIDCITQ----GR----------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVH  311 (329)
T ss_dssp             HHHHHHTTSCCTTCSSCHH---HHHHHHHH----TC----------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCHH---HHHHHHHc----CC----------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHH
Confidence            9999999 89999764321   12211111    00          1112233467899999999999999999999999


Q ss_pred             HHhcCCC
Q 010432          434 EALKPLP  440 (511)
Q Consensus       434 ~~L~~l~  440 (511)
                      ++|+.+.
T Consensus       312 ~~L~~l~  318 (329)
T 4aoj_A          312 ARLQALA  318 (329)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2e-60  Score=476.16  Aligned_cols=251  Identities=23%  Similarity=0.362  Sum_probs=204.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||++......  ..+.+.+|+.+|++|+|||||++++++.+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~   94 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTE---------DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE   94 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETT---------TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECC---------CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE
Confidence            589999999999999999999876         6889999999866433  24568999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++.+|||||||+||+|.++|..+ ...+++..++.|+.||+.||+|||+++   ||||||||+||||+            
T Consensus        95 ~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~------------  159 (350)
T 4b9d_A           95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLT------------  159 (350)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEEC------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEEC------------
Confidence            99999999999999999999754 445789999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+|+.......  ..+..+||+.|||||++.+..|+.++||||||||||||++|+.|
T Consensus       160 -------------~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~P  224 (350)
T 4b9d_A          160 -------------KDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA  224 (350)
T ss_dssp             -------------TTCCEEECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCCEEEcccccceeecCCcc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                         478899999999997643211  23346899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+....   .+...+   ....      . +    ..+...+.++.+||.+||+.||.+|||+.|++++
T Consensus       225 F~~~~~~---~~~~~i---~~~~------~-~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          225 FEAGSMK---NLVLKI---ISGS------F-P----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             CCCSSHH---HHHHHH---HHTC------C-C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCcCHH---HHHHHH---HcCC------C-C----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            9764321   111111   1100      0 1    1122335789999999999999999999999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=9e-60  Score=470.66  Aligned_cols=252  Identities=26%  Similarity=0.373  Sum_probs=211.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+.|+++++||+|+||+||+|+++.         +|+.||||++........+.+.+|+.+|++|+|||||+++++|.++
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~---------tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~  143 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRS---------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG  143 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECC---------CCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3579999999999999999999876         7889999999766555556788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|||||||+||+|.+++..  ..+++..+..|+.||+.||+|||+++   ||||||||+||||+              
T Consensus       144 ~~~~ivmEy~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~--------------  204 (346)
T 4fih_A          144 DELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLT--------------  204 (346)
T ss_dssp             TEEEEEECCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC--------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEC--------------
Confidence            999999999999999999865  36899999999999999999999999   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||+|+.......  ..+..+||+.|||||++.+..|+.++||||||||||||++|+.||.
T Consensus       205 -----------~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~  271 (346)
T 4fih_A          205 -----------HDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF  271 (346)
T ss_dssp             -----------TTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -----------CCCCEEEecCcCceecCCCCC--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                       478899999999987654322  2345789999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +....   .....+....          .+.+  ......++++.+||.+||+.||++|||+.|++++
T Consensus       272 ~~~~~---~~~~~i~~~~----------~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          272 NEPPL---KAMKMIRDNL----------PPRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             TSCHH---HHHHHHHHSS----------CCCC--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CcCHH---HHHHHHHcCC----------CCCC--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            64321   1111111110          0111  1112335789999999999999999999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=8.3e-60  Score=464.99  Aligned_cols=260  Identities=26%  Similarity=0.441  Sum_probs=204.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.++||+|+||+||+|+++.            .||||+++....  ...+.|.+|+.+|++|+|||||++++++
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~------------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~  101 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG------------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM  101 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS------------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC------------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            34678889999999999999998643            699999975433  2345799999999999999999999988


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+ +.++||||||++|+|.++|......+++..++.|+.|||.||+|||+++   ||||||||+||||+           
T Consensus       102 ~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~-----------  166 (307)
T 3omv_A          102 TK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLH-----------  166 (307)
T ss_dssp             CS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEE-----------
T ss_pred             EC-CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEEC-----------
Confidence            54 5689999999999999999877778999999999999999999999988   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc---CCCCccccchhHHHHHHHHHh
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DIwSlGvil~ellt  361 (511)
                                    +++.+||+|||+|+..............+||+.|||||++.+   ..|+.++|||||||+||||+|
T Consensus       167 --------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ellt  232 (307)
T 3omv_A          167 --------------EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT  232 (307)
T ss_dssp             --------------TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHH
Confidence                          478899999999987654333333455789999999999864   469999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+.||.+.....  .+...+...         ...+.+ ...+..++..+.+||.+||+.||++||||.+|+++|+.+
T Consensus       233 g~~Pf~~~~~~~--~~~~~~~~~---------~~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          233 GELPYSHINNRD--QIIFMVGRG---------YASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             SSCTTTTCCCHH--HHHHHHHTT---------CCCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCChHH--HHHHHHhcC---------CCCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            999997643321  111111100         011111 122334567899999999999999999999999998755

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7.8e-60  Score=466.77  Aligned_cols=265  Identities=26%  Similarity=0.371  Sum_probs=213.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++++++.||+|+||+||+|++....    ...+++.||||+++.... ...++|.+|+.+|++|+|||||+++|+|.++
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~----~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~  101 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPA----PGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD  101 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-----------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCc----cCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC
Confidence            35667789999999999999985311    112578999999976533 3356799999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      +.++||||||++|+|.++|..+               ...+++..++.|+.|||.||+|||+++   ||||||||+||||
T Consensus       102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl  178 (308)
T 4gt4_A          102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLV  178 (308)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEE
Confidence            9999999999999999999643               135899999999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +                         +++.+||+|||+|+...........+..+||+.|||||++.+..|+.++|||||
T Consensus       179 ~-------------------------~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSf  233 (308)
T 4gt4_A          179 Y-------------------------DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY  233 (308)
T ss_dssp             C-------------------------GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             C-------------------------CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhH
Confidence            9                         478899999999987654433333445689999999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          353 GVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       353 Gvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||+||||+| |+.||.+...   ..+...+..    .          .....+..++..+.+||.+||+.||.+||||.+
T Consensus       234 Gvvl~El~t~g~~Pf~~~~~---~~~~~~i~~----~----------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~e  296 (308)
T 4gt4_A          234 GVVLWEVFSYGLQPYCGYSN---QDVVEMIRN----R----------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKD  296 (308)
T ss_dssp             HHHHHHHHTTTCCTTTTCCH---HHHHHHHHT----T----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHhCCCCCCCCCCH---HHHHHHHHc----C----------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHH
Confidence            999999998 8999976532   122222111    0          011123345678999999999999999999999


Q ss_pred             HHHHhcCCCCC
Q 010432          432 VVEALKPLPNL  442 (511)
Q Consensus       432 il~~L~~l~~~  442 (511)
                      |++.|+.+.++
T Consensus       297 i~~~L~a~~nl  307 (308)
T 4gt4_A          297 IHSRLRAWGNL  307 (308)
T ss_dssp             HHHHHHTSCC-
T ss_pred             HHHHHHhccCC
Confidence            99999876543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.1e-59  Score=463.29  Aligned_cols=250  Identities=22%  Similarity=0.271  Sum_probs=210.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|+++++||+|+||+||+|+++.         +|+.||||++.+..   ....+.+.+|+++|++|+|||||++++++.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~---------~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~  102 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELA---------TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ  102 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECC---------CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            469999999999999999999876         78899999997542   233467899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++.+|||||||+||+|.++|.+. ..+++..+..|+.||+.||+|||+++   ||||||||+||||+            
T Consensus       103 ~~~~~yivmEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~------------  166 (311)
T 4aw0_A          103 DDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN------------  166 (311)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC------------
T ss_pred             eCCEEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEc------------
Confidence            999999999999999999999654 47999999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+|+..............+||+.|||||++.+..|+.++||||||||||||++|+.|
T Consensus       167 -------------~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  233 (311)
T 4aw0_A          167 -------------EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP  233 (311)
T ss_dssp             -------------TTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                         4788999999999987554433344567999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      |.+....   .+...+.   ...        .    .++...++++.+||.+||+.||.+|||+.|++.
T Consensus       234 F~~~~~~---~~~~~i~---~~~--------~----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          234 FRAGNEG---LIFAKII---KLE--------Y----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             SCCSSHH---HHHHHHH---HTC--------C----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             CCCCCHH---HHHHHHH---cCC--------C----CCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence            9764321   1111111   110        1    112223577899999999999999999999753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.1e-59  Score=477.97  Aligned_cols=252  Identities=26%  Similarity=0.371  Sum_probs=212.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+.|++++.||+|+||+||+|+++.         +|+.||||++........+.+.+|+.+|++|+|||||+++++|.++
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~---------tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~  220 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRS---------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG  220 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECC---------CCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC
Confidence            3579999999999999999999876         7889999999877666667789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|||||||+||+|.+++..  ..+++..+..|+.||+.||+|||+++   ||||||||+||||+              
T Consensus       221 ~~~~iVmEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~--------------  281 (423)
T 4fie_A          221 DELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLT--------------  281 (423)
T ss_dssp             TEEEEEEECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEEC--------------
T ss_pred             CEEEEEEeCCCCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEc--------------
Confidence            999999999999999999865  35899999999999999999999999   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||+|+.......  .....+||+.|||||++.+..|+.++||||||||||||++|+.||.
T Consensus       282 -----------~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~  348 (423)
T 4fie_A          282 -----------HDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF  348 (423)
T ss_dssp             -----------TTCCEEECCCTTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -----------CCCCEEEecCccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                       478899999999987654322  2345789999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +....   .....+...          ..+.+  ......+.++.+||.+||+.||.+|||+.|++++
T Consensus       349 ~~~~~---~~~~~i~~~----------~~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          349 NEPPL---KAMKMIRDN----------LPPRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             TSCHH---HHHHHHHHS----------CCCCC--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CcCHH---HHHHHHHcC----------CCCCC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            64322   111111111          01111  1111235788999999999999999999999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.9e-58  Score=459.68  Aligned_cols=253  Identities=24%  Similarity=0.246  Sum_probs=206.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +.|++.++||+|+||+||+|+++.         +|+.||||+++.....     .+|+.+|++|+|||||++++++.+++
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~---------~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~  123 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQ---------TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGP  123 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETT
T ss_pred             hheEeCcEeccCCCeEEEEEEECC---------CCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            467888899999999999999876         7889999999865432     47999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .+|||||||+||+|.++|.+. ..+++..++.|+.||+.||+|||+++   ||||||||+||||+.              
T Consensus       124 ~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~--------------  185 (336)
T 4g3f_A          124 WVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS--------------  185 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECT--------------
T ss_pred             EEEEEEeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeC--------------
Confidence            999999999999999999654 47999999999999999999999998   999999999999984              


Q ss_pred             ccccccccccccC-ceeeecCCCcccCCCCCcc---eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          289 YGLFFNNMLFQDY-NAKLSDFGLAKDGPEGDKT---HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       289 ~~~~~~~~~~~~~-~~kl~DFGla~~~~~~~~~---~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                 ++ .+||+|||+|+........   .....++||+.|||||++.+..|+.++||||||||||||++|+.
T Consensus       186 -----------~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~  254 (336)
T 4g3f_A          186 -----------DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH  254 (336)
T ss_dssp             -----------TSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------CCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcC
Confidence                       44 6999999999876543221   11234689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||.+.........+..      ....+         ..++...++.+.+||.+||+.||.+|||+.||+++|...
T Consensus       255 Pf~~~~~~~~~~~i~~------~~~~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          255 PWTQYFRGPLCLKIAS------EPPPI---------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             SSTTTCCSCCHHHHHH------SCCGG---------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHc------CCCCc---------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            9987654432221111      10000         112223457889999999999999999999999987643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-58  Score=450.97  Aligned_cols=249  Identities=25%  Similarity=0.377  Sum_probs=199.8

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe---
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE---  206 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~---  206 (511)
                      ++.++||+|+||+||+|++..         ++..||||++......  ..+.|.+|+.+|++|+|||||+++++|..   
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~   99 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTE---------TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred             EeeeEEecCcCcEEEEEEECC---------CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC
Confidence            556689999999999999876         6889999999754332  34568999999999999999999999875   


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       ++.+|||||||++|+|.++|.+. ..+++..+..|+.||+.||+|||+++ ++||||||||+||||+.           
T Consensus       100 ~~~~~~lvmEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~-----------  166 (290)
T 3fpq_A          100 GKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITG-----------  166 (290)
T ss_dssp             TEEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESS-----------
T ss_pred             CCcEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEEC-----------
Confidence             35689999999999999999654 47999999999999999999999976 56999999999999973           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||+|+.....    .....+||+.|||||++.+ .|+.++|||||||+||||+||+.|
T Consensus       167 -------------~~g~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~P  228 (290)
T 3fpq_A          167 -------------PTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  228 (290)
T ss_dssp             -------------TTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             -------------CCCCEEEEeCcCCEeCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCC
Confidence                         3678999999999865432    2345789999999998864 699999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |......  ..+...+...             .....++...++++.+||.+||+.||++|||+.|++++
T Consensus       229 f~~~~~~--~~~~~~i~~~-------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          229 YSECQNA--AQIYRRVTSG-------------VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TTTCSSH--HHHHHHHTTT-------------CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCCcH--HHHHHHHHcC-------------CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            9754321  1111111110             00011111224678999999999999999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.9e-57  Score=441.19  Aligned_cols=247  Identities=26%  Similarity=0.358  Sum_probs=193.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||+++....   .....+.+|+.+|++|+|||||++++++.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~   83 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTT---------TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK   83 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTT---------TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECC---------CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE
Confidence            589999999999999999999865         688999999976533   23457899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++.+||||||| +|+|.+++.++ ..+++..+..++.||+.||+|||+++   ||||||||+||||+            
T Consensus        84 ~~~~~~ivmEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~------------  146 (275)
T 3hyh_A           84 SKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLD------------  146 (275)
T ss_dssp             CSSEEEEEEECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEEC------------
T ss_pred             ECCEEEEEEeCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEEC------------
Confidence            999999999999 78999999765 47999999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+|+......   .....+||+.|||||++.+..| +.++|||||||+||||++|+.
T Consensus       147 -------------~~~~vkl~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~  210 (275)
T 3hyh_A          147 -------------EHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL  210 (275)
T ss_dssp             -------------TTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCCCEEEeecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCC
Confidence                         47889999999998765432   2345789999999999998876 579999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||.+...   ..+...+.   ...        ..    ++...++++.+||.+||+.||++|||+.|++++
T Consensus       211 PF~~~~~---~~~~~~i~---~~~--------~~----~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          211 PFDDESI---PVLFKNIS---NGV--------YT----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             SSCCSSH---HHHHHHHH---HTC--------CC----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             CCCCCCH---HHHHHHHH---cCC--------CC----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            9975422   11111111   100        01    112235778999999999999999999999984

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.7e-58  Score=462.73  Aligned_cols=271  Identities=27%  Similarity=0.370  Sum_probs=219.3

Q ss_pred             hHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCC-CCcc
Q 010432          121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVH-LNLV  198 (511)
Q Consensus       121 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H-~nIv  198 (511)
                      .+.+++..++|++.+.||+|+||+||+|++...+.    ..+++.||||+++..... ..+.|.+|+.+|.++.| ||||
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~----~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV  131 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDK----TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV  131 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSS----TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCc----ccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence            34555667899999999999999999999865322    124678999999865443 34568999999999965 8999


Q ss_pred             eEeeEEEeC-CeEEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 010432          199 KLIGYCIED-DQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY  262 (511)
Q Consensus       199 ~l~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiH  262 (511)
                      +++|+|... +.++||||||++|+|.++|...               ...+++..++.|+.|||.||+|||+++   |||
T Consensus       132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiH  208 (353)
T 4ase_A          132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIH  208 (353)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eec
Confidence            999999764 5689999999999999999643               234889999999999999999999998   999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH  342 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~  342 (511)
                      |||||+||||+                         +++.+||+|||+|+...........+..+||+.|||||++.+..
T Consensus       209 RDLK~~NILl~-------------------------~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~  263 (353)
T 4ase_A          209 RDLAARNILLS-------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV  263 (353)
T ss_dssp             SCCSGGGEEEC-------------------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             CccCccceeeC-------------------------CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCC
Confidence            99999999998                         47889999999999876655444455678999999999999999


Q ss_pred             CCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhccc
Q 010432          343 LTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       343 ~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~  421 (511)
                      |+.++|||||||+||||+| |+.||.+.....  .+...+..    .          .....+..+++++.+||.+||+.
T Consensus       264 y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~--~~~~~i~~----g----------~~~~~p~~~~~~~~~li~~c~~~  327 (353)
T 4ase_A          264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE----G----------TRMRAPDYTTPEMYQTMLDCWHG  327 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHHH----T----------CCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--HHHHHHHc----C----------CCCCCCccCCHHHHHHHHHHcCc
Confidence            9999999999999999998 899997654321  11111111    0          11112223457899999999999


Q ss_pred             CCCCCCCHHHHHHHhcCC
Q 010432          422 DPKARPLMSEVVEALKPL  439 (511)
Q Consensus       422 dP~~RPs~~eil~~L~~l  439 (511)
                      ||.+||||.+|+++|+.+
T Consensus       328 dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          328 EPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             SGGGSCCHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHH
Confidence            999999999999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=7e-58  Score=450.25  Aligned_cols=251  Identities=27%  Similarity=0.341  Sum_probs=199.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|++..+.      .+++.||||+++.....  ....+.+|+.+|++|+|||||++++++.+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~   97 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGS------DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT   97 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSST------TTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCC------CCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence            47999999999999999999885432      26889999999764322  22467899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++.+|||||||+||+|.++|.+. ..+++..+..|+.||+.||+|||+++   ||||||||+|||++             
T Consensus        98 ~~~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~-------------  160 (304)
T 3ubd_A           98 EGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLD-------------  160 (304)
T ss_dssp             TTEEEEEECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEEC-------------
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEc-------------
Confidence            99999999999999999999654 47999999999999999999999999   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||+|+.......  .....+||+.|||||++.+..|+.++|||||||+||||+||+.||
T Consensus       161 ------------~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF  226 (304)
T 3ubd_A          161 ------------EEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF  226 (304)
T ss_dssp             ------------TTSCEEEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ------------CCCCEEecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCC
Confidence                        478899999999987544322  234578999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVE  434 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~-----~eil~  434 (511)
                      .+....   .+...+.   ...        .    .++...++++.+||.+||+.||.+|||+     +|+++
T Consensus       227 ~~~~~~---~~~~~i~---~~~--------~----~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          227 QGKDRK---ETMTMIL---KAK--------L----GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CCSSHH---HHHHHHH---HCC--------C----CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CCcCHH---HHHHHHH---cCC--------C----CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            764321   1111111   110        0    1122235788999999999999999985     45554

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.7e-56  Score=440.11  Aligned_cols=265  Identities=26%  Similarity=0.362  Sum_probs=198.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHH--HHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL--AEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~--~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|.+.++||+|+||+||+|++           +|+.||||+++...   ...+.  .|+.++.+++|||||++++++..
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-----------~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~   68 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-----------RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNK   68 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-----------TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-----------CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEe
Confidence            4577888999999999999987           46799999997542   23333  45666678899999999999987


Q ss_pred             CC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecccCCCcEEeccccc
Q 010432          207 DD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA-----ERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       207 ~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~-----~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ++    .+|||||||++|+|.++|...  .+++..++.|+.|++.||+|||++.     .++||||||||+||||+    
T Consensus        69 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~----  142 (303)
T 3hmm_A           69 DNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK----  142 (303)
T ss_dssp             ECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC----
T ss_pred             cCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC----
Confidence            54    579999999999999999754  5899999999999999999999871     23499999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccC------CCCccccc
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG------HLTSRSDV  349 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~------~~~~~~DI  349 (511)
                                           .++.+||+|||+|+.........  .....+||+.|||||++.+.      .|+.++||
T Consensus       143 ---------------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DV  201 (303)
T 3hmm_A          143 ---------------------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI  201 (303)
T ss_dssp             ---------------------TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHH
T ss_pred             ---------------------CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhh
Confidence                                 47889999999998754433221  22346899999999998754      47889999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCCCCCch---------hHHHhhhhhhccccccccccCCccCCC-CCHHHHHHHHHHHHHhc
Q 010432          350 YSFGVVLLEMLTGRRSMDKNRPNGEH---------NLVEWARPHLGERRRFYRLIDPRLEGH-FSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Li~~cl  419 (511)
                      |||||+||||+||..||.........         .........      .....++.+... ...+.+..+.+||.+||
T Consensus       202 wS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~rp~~p~~~~~~~~~~~l~~li~~cl  275 (303)
T 3hmm_A          202 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSCEALRVMAKIMRECW  275 (303)
T ss_dssp             HHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTC
T ss_pred             hhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHH------hcccCCCCCCccccchHHHHHHHHHHHHHc
Confidence            99999999999998887543221100         000000000      001112222221 12356678999999999


Q ss_pred             ccCCCCCCCHHHHHHHhcCCC
Q 010432          420 SRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~L~~l~  440 (511)
                      +.||++||||.+|++.|+.+.
T Consensus       276 ~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          276 YANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999997654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.4e-55  Score=435.10  Aligned_cols=252  Identities=23%  Similarity=0.379  Sum_probs=189.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||+++..... ..+.+.+|+.+|++|+|||||+++++|.+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~   74 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKV---------DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLE   74 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETT---------TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             chhCEEeeEEecCCCeEEEEEEECC---------CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence            3569999999999999999999876         6889999999765432 33568999999999999999999999876


Q ss_pred             CC------------eEEEEEEccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          207 DD------------QRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       207 ~~------------~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      .+            .+|||||||++|+|.+++..+..  ..++..++.|+.||+.||+|||+++   ||||||||+||||
T Consensus        75 ~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl  151 (299)
T 4g31_A           75 KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFF  151 (299)
T ss_dssp             EC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred             cCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEE
Confidence            44            37899999999999999975432  3456778899999999999999999   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc----------eeeeeccccccccCCcccccCC
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT----------HVSTRVMGTYGYAAPEYVMTGH  342 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~Gt~~y~aPE~~~~~~  342 (511)
                      +                         .++.+||+|||+|+........          ...+..+||+.|||||++.+..
T Consensus       152 ~-------------------------~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~  206 (299)
T 4g31_A          152 T-------------------------MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS  206 (299)
T ss_dssp             C-------------------------TTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCC
T ss_pred             C-------------------------CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCC
Confidence            8                         4778999999999876543221          1123468999999999999999


Q ss_pred             CCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccC
Q 010432          343 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       343 ~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~d  422 (511)
                      |+.++||||||||||||++   ||....     ........          +....+. ......++.+.+||.+||+.|
T Consensus       207 y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~~~~~----------~~~~~~p-~~~~~~~~~~~~li~~~L~~d  267 (299)
T 4g31_A          207 YSHKVDIFSLGLILFELLY---PFSTQM-----ERVRTLTD----------VRNLKFP-PLFTQKYPCEYVMVQDMLSPS  267 (299)
T ss_dssp             CCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHHHHH----------HHTTCCC-HHHHHHCHHHHHHHHHHTCSS
T ss_pred             CCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHHHHHH----------HhcCCCC-CCCcccCHHHHHHHHHHcCCC
Confidence            9999999999999999996   775311     11110000          0000000 011223456789999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|||+.||+++
T Consensus       268 P~~Rps~~eil~h  280 (299)
T 4g31_A          268 PMERPEAINIIEN  280 (299)
T ss_dssp             GGGSCCHHHHHTS
T ss_pred             hhHCcCHHHHhcC
Confidence            9999999999874

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.6e-54  Score=438.47  Aligned_cols=268  Identities=23%  Similarity=0.303  Sum_probs=203.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||+++.....  ..+.+++|+.+|++|+|||||++++++..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~---------t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~  124 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRL---------TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRP  124 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECC---------CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeec
Confidence            579999999999999999999876         7889999999765432  23568899999999999999999998764


Q ss_pred             ------CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 ------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                            .+.+|||||||. |+|.+++.. ...+++..+..|+.||+.||.|||+++   ||||||||+|||++       
T Consensus       125 ~~~~~~~~~~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~-------  192 (398)
T 4b99_A          125 TVPYGEFKSVYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVN-------  192 (398)
T ss_dssp             SSCTTTCCCEEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC-------
T ss_pred             ccccccCCEEEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccC-------
Confidence                  357899999995 789999965 457999999999999999999999999   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCc--ceeeeeccccccccCCcccccC-CCCccccchhHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLL  357 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~--~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~  357 (511)
                                        .++.+||+|||+|+.......  ....+..+||+.|||||++.+. .|+.++||||+|||||
T Consensus       193 ------------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~  254 (398)
T 4b99_A          193 ------------------ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG  254 (398)
T ss_dssp             ------------------TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             ------------------CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHH
Confidence                              478899999999987643221  1123457899999999998875 5699999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhhhccc----------cccccccCCccCCC---CCHHHHHHHHHHHHHhcccCCC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGER----------RRFYRLIDPRLEGH---FSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      ||++|++||.+.........+..........          ........+.....   .....+.++.+||.+||+.||.
T Consensus       255 ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  334 (398)
T 4b99_A          255 EMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS  334 (398)
T ss_dssp             HHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTT
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChh
Confidence            9999999998754332222211111000000          00000000000000   0011246789999999999999


Q ss_pred             CCCCHHHHHHH
Q 010432          425 ARPLMSEVVEA  435 (511)
Q Consensus       425 ~RPs~~eil~~  435 (511)
                      +|||+.|+|+|
T Consensus       335 ~R~ta~e~L~H  345 (398)
T 4b99_A          335 ARISAAAALRH  345 (398)
T ss_dssp             TSCCHHHHTTS
T ss_pred             HCcCHHHHhcC
Confidence            99999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4.4e-53  Score=428.16  Aligned_cols=205  Identities=25%  Similarity=0.325  Sum_probs=173.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      ..++|++.++||+|+||+||+|+++.+      ..+++.||||++....  ...++.+|+++|+.+ +|||||++++++.
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~------~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~   90 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQ------VGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFR   90 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBT------TSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEccc------CCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence            457899999999999999999987532      1267899999987543  345688999999998 6999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+++|||||||++|+|.+++.    .+++..+..++.||+.||+|||+++   ||||||||+||||+.           
T Consensus        91 ~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~-----------  152 (361)
T 4f9c_A           91 KNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNR-----------  152 (361)
T ss_dssp             ETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEET-----------
T ss_pred             ECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeC-----------
Confidence            9999999999999999999983    5899999999999999999999999   999999999999984           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc--------------------------eeeeeccccccccCCcccc
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--------------------------HVSTRVMGTYGYAAPEYVM  339 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--------------------------~~~~~~~Gt~~y~aPE~~~  339 (511)
                                   +.+.+||+|||+|+........                          ...+..+||+.|||||++.
T Consensus       153 -------------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~  219 (361)
T 4f9c_A          153 -------------RLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLT  219 (361)
T ss_dssp             -------------TTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHT
T ss_pred             -------------CCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHc
Confidence                         2468999999999865432110                          1123457999999999998


Q ss_pred             cC-CCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          340 TG-HLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       340 ~~-~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                      +. .|+.++||||+|||+|||++|+.||....
T Consensus       220 ~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          220 KCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             CCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence            75 58999999999999999999999997543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=7.1e-53  Score=451.48  Aligned_cols=256  Identities=21%  Similarity=0.290  Sum_probs=214.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||++........+.+.+|+.+|+.|+|||||+|+++|.++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~---------tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~  226 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERA---------TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD  226 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS
T ss_pred             ccccEEEEEEeeccCeEEEEEEECC---------CCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            4689999999999999999999876         7889999999876655566789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|||||||+||+|.++|......+++..+..|+.||+.||+|||+++   ||||||||+||||+..            
T Consensus       227 ~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~------------  291 (573)
T 3uto_A          227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTK------------  291 (573)
T ss_dssp             SEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSS------------
T ss_pred             CEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCC------------
Confidence            9999999999999999999766678999999999999999999999999   9999999999999841            


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 ..+.+||+|||+|+.......   ....+||+.|||||++.+..|+.++||||||||||||++|+.||.
T Consensus       292 -----------~~~~vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~  357 (573)
T 3uto_A          292 -----------RSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG  357 (573)
T ss_dssp             -----------SCCCEEECCCSSCEECCTTSE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             -----------CCCCEEEeeccceeEccCCCc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                       246799999999998765432   344689999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.....   ....+..   ...        .+........++++.+||.+||+.||.+|||+.|+++|
T Consensus       358 ~~~~~~---~~~~i~~---~~~--------~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          358 GENDDE---TLRNVKS---CDW--------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             CSSHHH---HHHHHHT---TCC--------CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CcCHHH---HHHHHHh---CCC--------CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            653221   1111110   000        00111111235778999999999999999999999996

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.4e-52  Score=445.75  Aligned_cols=251  Identities=26%  Similarity=0.348  Sum_probs=203.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHH---HHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWL---AEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~---~E~~il~~l~H~nIv~l~  201 (511)
                      .++|+++++||+|+||+||+|+++.         +|+.||||++++...   .....+.   .++.+++.++|||||+++
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~---------tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~  258 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKAD---------TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS  258 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECC---------CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEE
Confidence            4689999999999999999999876         788999999975321   1122233   346777889999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ++|.+.+.+|||||||+||+|.++|.+. ..+++..+..|+.||+.||+|||+++   ||||||||+||||+        
T Consensus       259 ~~f~~~~~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld--------  326 (689)
T 3v5w_A          259 YAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLD--------  326 (689)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEEC--------
T ss_pred             EEEEECCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEe--------
Confidence            9999999999999999999999999654 47999999999999999999999999   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ell  360 (511)
                                       .++++||+|||+|+......    ....+||+.|||||++.. ..|+.++||||||||||||+
T Consensus       327 -----------------~~G~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmL  385 (689)
T 3v5w_A          327 -----------------EHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL  385 (689)
T ss_dssp             -----------------TTSCEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence                             48899999999998765432    234689999999999974 58999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      +|+.||.+........+.....   ..            ...++...++++.+||.+||+.||.+|++     +.||++|
T Consensus       386 tG~~PF~~~~~~~~~~i~~~i~---~~------------~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          386 RGHSPFRQHKTKDKHEIDRMTL---TM------------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             HSSCTTCGGGCCCHHHHHHHHH---HC------------CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             hCCCCCCCCChHHHHHHHHhhc---CC------------CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence            9999997654333222211111   11            01122233578999999999999999998     6777764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4e-50  Score=401.33  Aligned_cols=283  Identities=40%  Similarity=0.696  Sum_probs=237.0

Q ss_pred             cChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcc
Q 010432          119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv  198 (511)
                      +.+.++....++|++.+.||+|+||.||+|++.          ++..||||++........+.+.+|+.+|+.++||||+
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   98 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR----------DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLV   98 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT----------TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBC
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEEC----------CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEe
Confidence            344445556789999999999999999999864          4679999999877656667899999999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      ++++++...+..++||||+++|+|.+++....   ..+++..++.++.||+.||.|||+++   |+||||||+|||++  
T Consensus        99 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~--  173 (321)
T 2qkw_B           99 SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLD--  173 (321)
T ss_dssp             CEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEEC--
T ss_pred             eEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEEC--
Confidence            99999999999999999999999999986543   35899999999999999999999998   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                             .++.+||+|||+++...............||+.|+|||++.+..++.++|||||||+
T Consensus       174 -----------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  230 (321)
T 2qkw_B          174 -----------------------ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVV  230 (321)
T ss_dssp             -----------------------TTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHH
T ss_pred             -----------------------CCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHH
Confidence                                   477899999999987554333333344579999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|||++|+.||....+........|..... ....+...+++.+........+..+.+|+.+||+.||.+|||+.+|+++
T Consensus       231 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          231 LFEVLCARSAIVQSLPREMVNLAEWAVESH-NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHCCTTCSCSSSSSCCCHHHHTHHHH-TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhCCCcccccCcHHHHHHHHHhhhcc-ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999998776665555555443322 2233445566666677788889999999999999999999999999999


Q ss_pred             hcCCC
Q 010432          436 LKPLP  440 (511)
Q Consensus       436 L~~l~  440 (511)
                      |+.+.
T Consensus       310 L~~~l  314 (321)
T 2qkw_B          310 LEYAL  314 (321)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.9e-48  Score=385.12  Aligned_cols=253  Identities=24%  Similarity=0.351  Sum_probs=210.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||+||+|.+..         +++.||||++........+.+.+|+.++++++||||+++++++..
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   88 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVA---------TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV   88 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTT---------TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECC---------CCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE
Confidence            34689999999999999999998765         678999999986655566778999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++|||||++|+|.+++...  .+++..+..++.||+.||.|||+++   |+||||||+|||++             
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~-------------  150 (297)
T 3fxz_A           89 GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLG-------------  150 (297)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-------------
T ss_pred             CCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEC-------------
Confidence            99999999999999999999654  5899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||++.........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       151 ------------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  216 (297)
T 3fxz_A          151 ------------MDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (297)
T ss_dssp             ------------TTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------------CCCCEEEeeCCCceecCCcccc--cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                        4778999999999876543322  33467999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ........  .......   .        .+  ....+...+..+.+||.+||+.||.+|||+.+++++
T Consensus       217 ~~~~~~~~--~~~~~~~---~--------~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          217 LNENPLRA--LYLIATN---G--------TP--ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             TTSCHHHH--HHHHHHH---C--------SC--CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCHHHH--HHHHHhC---C--------CC--CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            75432111  0000000   0        00  011122335678999999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.8e-48  Score=389.96  Aligned_cols=288  Identities=40%  Similarity=0.731  Sum_probs=233.8

Q ss_pred             ccccChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCC
Q 010432          116 LRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVH  194 (511)
Q Consensus       116 ~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H  194 (511)
                      ...+++.++....++|++.+.||+|+||.||+|++.          ++..||||++...... ....+.+|+.++++++|
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h   86 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA----------DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVH   86 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS----------SSCCEEEEECCC-----CCCHHHHHHHGGGTCCC
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEec----------CCCEEEEEEeccccCchHHHHHHHHHHHHHhccC
Confidence            456888999999999999999999999999999753          4678999999765422 22368899999999999


Q ss_pred             CCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       195 ~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      |||+++++++...+..++|||||++|+|.+++....   ..+++..+..++.||+.||.|||++..++|+||||||+|||
T Consensus        87 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil  166 (326)
T 3uim_A           87 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL  166 (326)
T ss_dssp             TTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred             CCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence            999999999999999999999999999999997542   34899999999999999999999982122999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      ++                         +++.+||+|||+++........ ......||+.|+|||++.+..++.++||||
T Consensus       167 ~~-------------------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s  220 (326)
T 3uim_A          167 LD-------------------------EEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFG  220 (326)
T ss_dssp             EC-------------------------TTCCEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHH
T ss_pred             EC-------------------------CCCCEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchh
Confidence            98                         4778999999999876543322 234456999999999999889999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC--CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          352 FGVVLLEMLTGRRSMDKNR--PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      |||++|||++|+.||....  .........+..... .........+..+...+....+..+.+|+.+||+.||.+|||+
T Consensus       221 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  299 (326)
T 3uim_A          221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL-KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM  299 (326)
T ss_dssp             HHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT-SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred             HHHHHHHHHhCCCcccccccccccchhHHHHHHHHh-hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence            9999999999999996211  111222333333322 2233445556666777788889999999999999999999999


Q ss_pred             HHHHHHhcCCC
Q 010432          430 SEVVEALKPLP  440 (511)
Q Consensus       430 ~eil~~L~~l~  440 (511)
                      .+|+++|+...
T Consensus       300 ~ell~~L~~~~  310 (326)
T 3uim_A          300 SEVVRMLEGDG  310 (326)
T ss_dssp             HHHHHHHHTSS
T ss_pred             HHHHHHhcCcc
Confidence            99999998643

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-48  Score=388.86  Aligned_cols=261  Identities=26%  Similarity=0.390  Sum_probs=212.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|.+.++||+|+||+||+|++..         ++..||+|++........+.+.+|+.+|++++||||+++++++.++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~---------~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   79 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD   79 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETT---------TCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             hhHeeccceecCCCCEEEEEEEECC---------CCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC
Confidence            3578899999999999999999876         6779999999766555567799999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++|||||++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++              
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~--------------  142 (310)
T 3s95_A           80 KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVR--------------  142 (310)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEC--------------
T ss_pred             CeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEEC--------------
Confidence            9999999999999999999876778999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcce------------eeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH------------VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~------------~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                 .++.+||+|||+++.........            ......||+.|+|||++.+..++.++|||||||+
T Consensus       143 -----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  211 (310)
T 3s95_A          143 -----------ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV  211 (310)
T ss_dssp             -----------TTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             -----------CCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHH
Confidence                       47789999999998764432211            0114579999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|||++|..||............           ......+..    .+..++..+.+|+.+||+.||.+|||+.+|++.
T Consensus       212 l~el~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~  276 (310)
T 3s95_A          212 LCEIIGRVNADPDYLPRTMDFGL-----------NVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHW  276 (310)
T ss_dssp             HHHHHHTCCSSTTTSCBCTTSSB-----------CHHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCcchhhhHHHHhh-----------hhhcccccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999999998754332211000           000000000    111223568899999999999999999999999


Q ss_pred             hcCCC
Q 010432          436 LKPLP  440 (511)
Q Consensus       436 L~~l~  440 (511)
                      |+.+.
T Consensus       277 L~~l~  281 (310)
T 3s95_A          277 LETLR  281 (310)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98663

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.2e-48  Score=396.62  Aligned_cols=266  Identities=25%  Similarity=0.388  Sum_probs=213.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++.....  ....++..||||+++..... ..+.+.+|+.+|+++ +|||||++++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDK--DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCST--TCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccC--cCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            34689999999999999999998753211  11235678999999865432 335689999999999 899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      ...+.+|||||||++|+|.+++....               ..+++..++.++.||+.||.|||+++   ||||||||+|
T Consensus       157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~N  233 (370)
T 2psq_A          157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARN  233 (370)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGG
T ss_pred             ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhh
Confidence            99999999999999999999997543               24789999999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      |||+                         .++.+||+|||+++...............||+.|+|||++.+..|+.++||
T Consensus       234 Ill~-------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv  288 (370)
T 2psq_A          234 VLVT-------------------------ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  288 (370)
T ss_dssp             EEEC-------------------------TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHH
T ss_pred             EEEC-------------------------CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHH
Confidence            9998                         477899999999987654333222334567899999999999999999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |..||.......   +......              ......+..++..+.+||.+||+.||.+||+
T Consensus       289 wslG~il~ellt~g~~p~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt  351 (370)
T 2psq_A          289 WSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKE--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPT  351 (370)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHT--------------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhc--------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            999999999999 999997643221   1111110              0011122234578999999999999999999


Q ss_pred             HHHHHHHhcCC
Q 010432          429 MSEVVEALKPL  439 (511)
Q Consensus       429 ~~eil~~L~~l  439 (511)
                      +.+|++.|+.+
T Consensus       352 ~~ell~~L~~i  362 (370)
T 2psq_A          352 FKQLVEDLDRI  362 (370)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999865

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1e-48  Score=391.44  Aligned_cols=271  Identities=27%  Similarity=0.336  Sum_probs=207.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.++||+|+||+||+|++.           ++.||||++..... ....+.+|+.+|++++|||||++++++..
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~   89 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-----------NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKR   89 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-----------TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-----------CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceecc
Confidence            3468999999999999999999873           57999999975432 22346679999999999999999999987


Q ss_pred             CC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCCCeEecccCCCcEEe
Q 010432          207 DD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE----------AERPVIYRDFKTSNILL  272 (511)
Q Consensus       207 ~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~----------~~~~iiHrDLKp~NILl  272 (511)
                      ..    .+++|||||++|+|.+++...  .+++..++.++.||+.||.|||+.          +   |+||||||+|||+
T Consensus        90 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill  164 (322)
T 3soc_A           90 GTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLL  164 (322)
T ss_dssp             ECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEE
T ss_pred             CCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEE
Confidence            44    469999999999999999653  589999999999999999999998          7   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----CCCCccc
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRS  347 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~  347 (511)
                      +                         .++.+||+|||+++...............||+.|+|||++.+     ..++.++
T Consensus       165 ~-------------------------~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  219 (322)
T 3soc_A          165 K-------------------------NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRI  219 (322)
T ss_dssp             C-------------------------TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHH
T ss_pred             C-------------------------CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccc
Confidence            8                         477899999999986554333222334579999999999876     3567789


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccccc-----ccccCCccCCC-CCHHHHHHHHHHHHHhccc
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF-----YRLIDPRLEGH-FSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~Li~~cl~~  421 (511)
                      |||||||++|||++|+.||.+................. ....+     .....+.+... .....+..+.+||.+||+.
T Consensus       220 DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  298 (322)
T 3soc_A          220 DMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP-SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDH  298 (322)
T ss_dssp             HHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC-CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCS
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC-chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccC
Confidence            99999999999999999998754433222211110000 00000     00111111111 1224567799999999999


Q ss_pred             CCCCCCCHHHHHHHhcCCC
Q 010432          422 DPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       422 dP~~RPs~~eil~~L~~l~  440 (511)
                      ||.+|||+.+|++.|+.+.
T Consensus       299 dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          299 DAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             SGGGSCCHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHH
Confidence            9999999999999998664

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=5.3e-48  Score=387.19  Aligned_cols=250  Identities=24%  Similarity=0.348  Sum_probs=207.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|++..         +|+.||||++.....  ...+.+.+|+.+|+.++||||+++++++.
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~   84 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHIL---------TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE   84 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            4589999999999999999999865         688999999976532  23456889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..|+|||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++            
T Consensus        85 ~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~------------  148 (328)
T 3fe3_A           85 TEKTLYLIMEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLD------------  148 (328)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC------------
T ss_pred             ECCEEEEEEECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEc------------
Confidence            999999999999999999999654 46899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCC-ccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT-SRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~-~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++.......   ....+||+.|+|||++.+..+. .++|||||||++|||++|+.
T Consensus       149 -------------~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  212 (328)
T 3fe3_A          149 -------------ADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL  212 (328)
T ss_dssp             -------------TTSCEEECSTTCCGGGSSSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCCCEEEeeccCceecCCCCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence                         477899999999986554332   2346899999999999888775 79999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||.+....   .+.....   ....            .++...+..+.+|+.+||+.||.+|||+.+++++-
T Consensus       213 pf~~~~~~---~~~~~i~---~~~~------------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~  266 (328)
T 3fe3_A          213 PFDGQNLK---ELRERVL---RGKY------------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDR  266 (328)
T ss_dssp             SSCCSSHH---HHHHHHH---HCCC------------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCT
T ss_pred             CCCCCCHH---HHHHHHH---hCCC------------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCH
Confidence            99764321   1111111   0000            11112356789999999999999999999999863

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.6e-47  Score=384.98  Aligned_cols=251  Identities=30%  Similarity=0.364  Sum_probs=207.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||+++...   ......+.+|+.+|+.++||||+++++++
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   74 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKA---------TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF   74 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE
Confidence            3579999999999999999999875         68899999997542   23345688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..|||||||++|+|..++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++           
T Consensus        75 ~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~-----------  139 (337)
T 1o6l_A           75 QTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLD-----------  139 (337)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC-----------
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEEC-----------
Confidence            9999999999999999999998654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||++|||++|+.
T Consensus       140 --------------~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  203 (337)
T 1o6l_A          140 --------------KDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL  203 (337)
T ss_dssp             --------------TTSCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeeccchhhcccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCC
Confidence                          478899999999986433222  1334689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~L  436 (511)
                      ||......   .+....   .....            .++...+..+.+||.+||+.||.+||     ++.+|+++-
T Consensus       204 Pf~~~~~~---~~~~~i---~~~~~------------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~  262 (337)
T 1o6l_A          204 PFYNQDHE---RLFELI---LMEEI------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  262 (337)
T ss_dssp             SSCCSSHH---HHHHHH---HHCCC------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred             CCCCCCHH---HHHHHH---HcCCC------------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence            99754321   111111   11100            11222357889999999999999999     899998753

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.7e-48  Score=387.97  Aligned_cols=262  Identities=25%  Similarity=0.406  Sum_probs=211.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||.||+|++...+.      .+..||||+++.... ...+.+.+|+.+|++++||||+++++++..
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQ------RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTS------CCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCC------CCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            4678999999999999999999875332      456799999986533 234568999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..+||||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~-------------  185 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVD-------------  185 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-------------
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEC-------------
Confidence            99999999999999999999776678999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                  .++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       186 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  253 (325)
T 3kul_A          186 ------------SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER  253 (325)
T ss_dssp             ------------TTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ------------CCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence                        4778999999999876543222 12223457889999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ||......   .+......              ......+..++..+.+||.+||+.||.+||++.+|++.|+.+.
T Consensus       254 p~~~~~~~---~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          254 PYWNMTNR---DVISSVEE--------------GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             TTTTSCHH---HHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccCCHH---HHHHHHHc--------------CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99754321   11111110              0011122234578999999999999999999999999998663

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-47  Score=389.64  Aligned_cols=258  Identities=22%  Similarity=0.295  Sum_probs=208.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|+++.         +|..||||+++.....      ..+.+.+|+.+|++++||||++++
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~---------~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~   81 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKS---------TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH   81 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECC---------CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEE
Confidence            4679999999999999999999875         6889999999765432      246789999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++.+.+..+||||||++|+|.+++.. ...+++..+..++.||+.||.|||+++   |+||||||+|||++..+.    
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~----  153 (361)
T 2yab_A           82 DVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNI----  153 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTS----
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCC----
Confidence            999999999999999999999999965 347999999999999999999999998   999999999999974210    


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ....+||+|||+++.......   ....+||+.|+|||++.+..|+.++|||||||++|+|++
T Consensus       154 -----------------~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~  213 (361)
T 2yab_A          154 -----------------PIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  213 (361)
T ss_dssp             -----------------SSCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CccCEEEEecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh
Confidence                             123799999999987655322   234679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |..||.+....   .....+..   ....        +...+....+..+.+||.+||..||.+|||+.+++++-
T Consensus       214 g~~Pf~~~~~~---~~~~~i~~---~~~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp  274 (361)
T 2yab_A          214 GASPFLGDTKQ---ETLANITA---VSYD--------FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP  274 (361)
T ss_dssp             SCCSSCCSSHH---HHHHHHHT---TCCC--------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             CCCCCCCCCHH---HHHHHHHh---cCCC--------CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            99999764321   11111100   0000        00000011246789999999999999999999999853

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=8.1e-48  Score=382.78  Aligned_cols=261  Identities=28%  Similarity=0.452  Sum_probs=202.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      +..++|++.+.||+|+||+||+|++           ++..||||++.......  .+.+.+|+.+|++++||||++++++
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  102 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-----------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA  102 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-----------TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-----------CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            3456899999999999999999986           36789999997664332  3568899999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +...+..++|||||++|+|.+++.....  .+++..++.++.||+.||+|||+++ ++|+||||||+|||++        
T Consensus       103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~--------  173 (309)
T 3p86_A          103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVD--------  173 (309)
T ss_dssp             ECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEEC--------
T ss_pred             EEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEe--------
Confidence            9999999999999999999999965432  3899999999999999999999976 4599999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       174 -----------------~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  234 (309)
T 3p86_A          174 -----------------KKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT  234 (309)
T ss_dssp             -----------------TTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence                             477899999999986543221  1234679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |+.||.......   ........         ..    ...++...+..+.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       235 g~~Pf~~~~~~~---~~~~~~~~---------~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          235 LQQPWGNLNPAQ---VVAAVGFK---------CK----RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             CCCTTTTSCHHH---HHHHHHHS---------CC----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHH---HHHHHHhc---------CC----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999997543211   11111000         00    111222335778999999999999999999999999976643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-47  Score=379.45  Aligned_cols=256  Identities=18%  Similarity=0.242  Sum_probs=209.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|++..         ++..||+|++.... .....+.+|+.+|+.++||||+++++++.+.
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~---------~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   73 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETS---------SKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESM   73 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEET
T ss_pred             hhceEeeeEEecCCCeEEEEEEECC---------CCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecC
Confidence            4689999999999999999999875         68899999997553 2345688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++|||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++..            
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~------------  138 (321)
T 1tki_A           74 EELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTR------------  138 (321)
T ss_dssp             TEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSS------------
T ss_pred             CEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccC------------
Confidence            9999999999999999999766667999999999999999999999998   9999999999999841            


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       139 -----------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  204 (321)
T 1tki_A          139 -----------RSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             -----------SCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             -----------CCCCEEEEECCCCeECCCCCc---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence                       257899999999988755432   334679999999999998889999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .....   .......   .....+.    ....    ...+..+.+||.+||+.||.+|||+.+++++-
T Consensus       205 ~~~~~---~~~~~i~---~~~~~~~----~~~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          205 AETNQ---QIIENIM---NAEYTFD----EEAF----KEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             CSSHH---HHHHHHH---HTCCCCC----HHHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             CCCHH---HHHHHHH---cCCCCCC----hhhh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence            64321   1111111   0000000    0000    01246789999999999999999999999854

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.6e-48  Score=397.11  Aligned_cols=261  Identities=25%  Similarity=0.388  Sum_probs=211.1

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ....++|.+.+.||+|+||.||+|++..         ++..||||+++..... ....|.+|+.+|++++|||||+++++
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  180 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRA---------DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV  180 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEE
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEec---------CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3445789999999999999999999875         5779999999765322 22357899999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +...+..+||||||++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++          
T Consensus       181 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~----------  247 (377)
T 3cbl_A          181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVT----------  247 (377)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------
T ss_pred             EecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEc----------
Confidence            99989999999999999999999766667999999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-C
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g  362 (511)
                                     .++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |
T Consensus       248 ---------------~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g  312 (377)
T 3cbl_A          248 ---------------EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG  312 (377)
T ss_dssp             ---------------TTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             ---------------CCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence                           477899999999987544321111112346788999999998999999999999999999998 9


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ..||......   ........    .          .....+..++..+.+||.+||+.||.+|||+.+|++.|+.+
T Consensus       313 ~~p~~~~~~~---~~~~~~~~----~----------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          313 ASPYPNLSNQ---QTREFVEK----G----------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             CCSSTTSCHH---HHHHHHHT----T----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHH---HHHHHHHc----C----------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            9999754321   11111110    0          01111222356789999999999999999999999998754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.6e-47  Score=383.13  Aligned_cols=257  Identities=25%  Similarity=0.329  Sum_probs=206.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||+||+|++..         +++.||||++...... ..+.+.+|+.+++.++|||||++++++.+
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   76 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRV---------TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE   76 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhceeeeEEecCCCEEEEEEEECC---------CCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            4689999999999999999999875         6779999999755432 23568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..+||||||++|+|.+++.. ...+++..++.++.||+.||+|||+++   |+||||||+|||++             
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~-------------  139 (323)
T 3tki_A           77 GNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLD-------------  139 (323)
T ss_dssp             SSEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-------------
T ss_pred             CCeEEEEEEcCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEe-------------
Confidence            9999999999999999999854 346999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+++..............+||+.|+|||++.+..+ +.++|||||||++|||++|+.|
T Consensus       140 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p  207 (323)
T 3tki_A          140 ------------ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP  207 (323)
T ss_dssp             ------------TTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence                        477899999999986544333333345689999999999987776 7899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      |........ ....+...     ..         ........+..+.+||.+||+.||.+|||+.|++++-.
T Consensus       208 f~~~~~~~~-~~~~~~~~-----~~---------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~  264 (323)
T 3tki_A          208 WDQPSDSCQ-EYSDWKEK-----KT---------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW  264 (323)
T ss_dssp             CSSSCTTSH-HHHHHHTT-----CT---------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             CCCCchHHH-HHHHHhcc-----cc---------cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence            976543221 11111110     00         00001123467889999999999999999999987643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=7e-47  Score=386.32  Aligned_cols=251  Identities=24%  Similarity=0.326  Sum_probs=206.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++++.||+|+||.||+|++..         +++.||||++....   ......+.+|+.+|+.++|||||++++++
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~---------~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~   84 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKND---------TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF   84 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3579999999999999999999876         67899999996532   22346788999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+..|+|||||.+|+|..++.. ...+++..+..++.||+.||.|||+++   ||||||||+||||+           
T Consensus        85 ~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~-----------  149 (384)
T 4fr4_A           85 QDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLD-----------  149 (384)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-----------
T ss_pred             EeCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEC-----------
Confidence            999999999999999999999965 457999999999999999999999999   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc---CCCCccccchhHHHHHHHHHh
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DIwSlGvil~ellt  361 (511)
                                    .++.+||+|||+++.......   ....+||+.|+|||++..   ..|+.++|||||||++|||++
T Consensus       150 --------------~~g~vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ellt  212 (384)
T 4fr4_A          150 --------------EHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR  212 (384)
T ss_dssp             --------------TTSCEEECCCTTCEECCTTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHH
T ss_pred             --------------CCCCEEEeccceeeeccCCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHh
Confidence                          478899999999987654332   344689999999999863   468999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-MSEVVE  434 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-~~eil~  434 (511)
                      |+.||..........+.......               ...++...+..+.+||.+||+.||.+||+ +.+|++
T Consensus       213 G~~Pf~~~~~~~~~~~~~~~~~~---------------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          213 GRRPYHIRSSTSSKEIVHTFETT---------------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             SSCSSCCCTTSCHHHHHHHHHHC---------------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             CCCCCCCCCCccHHHHHHHHhhc---------------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            99999865444333222221110               01112223578899999999999999998 777765

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=8.4e-47  Score=371.97  Aligned_cols=265  Identities=24%  Similarity=0.303  Sum_probs=204.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||+||+|++..         +++.||||++......  ....+.+|+.+|++++||||+++++++.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   72 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS   72 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECC---------CCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe
Confidence            578999999999999999999876         6789999999765432  23568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..+||||||. |+|.+++......+++..+..++.||+.||+|||+++   |+||||||+|||++             
T Consensus        73 ~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~-------------  135 (292)
T 3o0g_A           73 DKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLIN-------------  135 (292)
T ss_dssp             TTEEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-------------
T ss_pred             CCEEEEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEc-------------
Confidence            999999999996 5777777666678999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC-CCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+++........  .....||+.|+|||++.+.. ++.++|||||||++|||++|..|
T Consensus       136 ------------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p  201 (292)
T 3o0g_A          136 ------------RNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             ------------TTSCEEECCCTTCEECCSCCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred             ------------CCCCEEEeecccceecCCcccc--ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCC
Confidence                        4778999999999876433222  23457899999999998765 89999999999999999999888


Q ss_pred             CCCCCCCCchhHHHhhhhhhcc--cc---ccccccC---------CccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGE--RR---RFYRLID---------PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~---------~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |......  .............  ..   ......+         ...........+..+.+||.+||+.||.+|||+.|
T Consensus       202 ~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  279 (292)
T 3o0g_A          202 LFPGNDV--DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE  279 (292)
T ss_dssp             SCCCSSH--HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CcCCCCH--HHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHH
Confidence            6543221  1111111110000  00   0000000         00001111234578899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++++
T Consensus       280 ~l~h  283 (292)
T 3o0g_A          280 ALQH  283 (292)
T ss_dssp             HHTS
T ss_pred             HhcC
Confidence            9974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=374.16  Aligned_cols=275  Identities=22%  Similarity=0.251  Sum_probs=212.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||+||+|++..         +++.||||++..... ...+.+.+|+.+|++++||||+++++++..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   78 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKK---------TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECC---------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec
Confidence            3579999999999999999999876         678999999975432 334678899999999999999999999987


Q ss_pred             CC--eEEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 DD--QRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ~~--~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .+  ..+||||||++|+|.+++....  ..+++..++.++.||+.||.|||+++   |+||||||+|||+.....     
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~-----  150 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGED-----  150 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTT-----
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCC-----
Confidence            55  7899999999999999997532  34899999999999999999999998   999999999999832110     


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc--------cCCCCccccchhHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--------TGHLTSRSDVYSFGV  354 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--------~~~~~~~~DIwSlGv  354 (511)
                                      .+..+||+|||+++.......   .....||+.|+|||++.        +..++.++|||||||
T Consensus       151 ----------------~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~  211 (319)
T 4euu_A          151 ----------------GQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV  211 (319)
T ss_dssp             ----------------SCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHH
T ss_pred             ----------------CCceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHH
Confidence                            356799999999987655432   23457999999999886        578899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCc-hhHHHhhhhhhcc-c-ccccc-------c-cCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          355 VLLEMLTGRRSMDKNRPNGE-HNLVEWARPHLGE-R-RRFYR-------L-IDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~-------~-~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      ++|||++|+.||........ ............. . ..+..       . -.......+....+..+.+||.+||+.||
T Consensus       212 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  291 (319)
T 4euu_A          212 TFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQ  291 (319)
T ss_dssp             HHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCT
T ss_pred             HHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCCh
Confidence            99999999999975433221 1111111111000 0 00000       0 01111234567788899999999999999


Q ss_pred             CCCCCHHHHHHHhcC
Q 010432          424 KARPLMSEVVEALKP  438 (511)
Q Consensus       424 ~~RPs~~eil~~L~~  438 (511)
                      .+|||+.|++++...
T Consensus       292 ~~R~s~~ell~h~~d  306 (319)
T 4euu_A          292 EKCWGFDQFFAETSD  306 (319)
T ss_dssp             TTSCCHHHHHHHHHH
T ss_pred             hhhccHHHhhhccHH
Confidence            999999999998764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=4.1e-47  Score=374.95  Aligned_cols=264  Identities=25%  Similarity=0.355  Sum_probs=207.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         ++..||||++.......   .+.+.+|+.++++++||||+++++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~   80 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTI---------LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD   80 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETT---------TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECC---------CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee
Confidence            4689999999999999999999865         67799999996543322   35688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..++..++||||+++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        81 ~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~-----------  145 (294)
T 4eqm_A           81 EEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILID-----------  145 (294)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC-----------
T ss_pred             eeCCeEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC-----------
Confidence            9999999999999999999999654 47899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       146 --------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~  210 (294)
T 4eqm_A          146 --------------SNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP  210 (294)
T ss_dssp             --------------TTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEEeCCCcccccccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence                          4778999999999876543222 2234579999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhcCCCCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-LMSEVVEALKPLPNLK  443 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-s~~eil~~L~~l~~~~  443 (511)
                      ||........  ...    ......       +..........+..+.+||.+||+.||.+|| ++.++++.|+.+....
T Consensus       211 pf~~~~~~~~--~~~----~~~~~~-------~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          211 PFNGETAVSI--AIK----HIQDSV-------PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             SSCSSCHHHH--HHH----HHSSCC-------CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             CCCCCChHHH--HHH----HhhccC-------CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence            9975432110  000    000000       0000111122357789999999999999999 8999999998775543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.1e-47  Score=388.58  Aligned_cols=251  Identities=27%  Similarity=0.386  Sum_probs=201.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCC-CCCCcceEee
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDL-VHLNLVKLIG  202 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~H~nIv~l~~  202 (511)
                      ..++|+++++||+|+||+||+|+++.         +++.||||+++...   ......+.+|..+|..+ +|||||++++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~   91 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFC   91 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcC---------CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEE
Confidence            34789999999999999999999876         67899999997542   12335678999999988 7999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++.+.+.+|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+||||+         
T Consensus        92 ~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~---------  158 (353)
T 3txo_A           92 CFQTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLD---------  158 (353)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC---------
T ss_pred             EEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEEC---------
Confidence            999999999999999999999999654 46999999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||++|||++|
T Consensus       159 ----------------~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G  220 (353)
T 3txo_A          159 ----------------HEGHCKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG  220 (353)
T ss_dssp             ----------------TTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHS
T ss_pred             ----------------CCCCEEEccccceeecccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhC
Confidence                            478899999999986433222  23446899999999999998999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~------~eil~~  435 (511)
                      +.||......   .+...+   ....            ..++...+..+.+||.+||+.||.+||++      .+|+++
T Consensus       221 ~~Pf~~~~~~---~~~~~i---~~~~------------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          221 HAPFEAENED---DLFEAI---LNDE------------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             SCSSCCSSHH---HHHHHH---HHCC------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             CCCCCCCCHH---HHHHHH---HcCC------------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence            9999764321   111111   1110            01112235678999999999999999998      677764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=4.6e-48  Score=392.11  Aligned_cols=273  Identities=27%  Similarity=0.383  Sum_probs=216.7

Q ss_pred             cChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCC
Q 010432          119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLN  196 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~n  196 (511)
                      +....+....++|++.+.||+|+||.||+|++....    ...+++.||||+++..... ..+.+.+|+.+|.++ +|||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpn   87 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN   87 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEecccc----ccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcc
Confidence            344555566789999999999999999999875321    1236789999999865432 235689999999999 8999


Q ss_pred             cceEeeEEEeCC-eEEEEEEccCCCCHHHHHhhCCC--------------------------------------------
Q 010432          197 LVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSL--------------------------------------------  231 (511)
Q Consensus       197 Iv~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------  231 (511)
                      ||++++++...+ ..++|||||++|+|.+++.....                                            
T Consensus        88 iv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (359)
T 3vhe_A           88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF  167 (359)
T ss_dssp             BCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred             eeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence            999999998754 48999999999999999975421                                            


Q ss_pred             ---------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          232 ---------------------PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       232 ---------------------~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                                           .+++..++.++.||+.||.|||+++   ||||||||+|||++                 
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~-----------------  227 (359)
T 3vhe_A          168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS-----------------  227 (359)
T ss_dssp             ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC-----------------
T ss_pred             ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEc-----------------
Confidence                                 1889999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKN  369 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~  369 (511)
                              .++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus       228 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  299 (359)
T 3vhe_A          228 --------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  299 (359)
T ss_dssp             --------GGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             --------CCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence                    377899999999987655444444455678999999999999999999999999999999998 99999765


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .....  +.......              .....+...+..+.+|+.+||+.||.+|||+.+|+++|+.+
T Consensus       300 ~~~~~--~~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          300 KIDEE--FCRRLKEG--------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             CCSHH--HHHHHHHT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             chhHH--HHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            43211  11111100              01111122346789999999999999999999999999754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.8e-46  Score=375.05  Aligned_cols=250  Identities=26%  Similarity=0.388  Sum_probs=206.7

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeE
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~  210 (511)
                      |...+.||+|+||.||+|++..         +|+.||||++........+.+.+|+.+|++++||||+++++++...+..
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~---------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKH---------SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEEL  117 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hhccEEeccCCCeEEEEEEECC---------CCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence            6667789999999999999865         5789999999877666667899999999999999999999999999999


Q ss_pred             EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecc
Q 010432          211 LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG  290 (511)
Q Consensus       211 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~  290 (511)
                      ++||||+++|+|.+++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++                 
T Consensus       118 ~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~-----------------  175 (321)
T 2c30_A          118 WVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLT-----------------  175 (321)
T ss_dssp             EEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-----------------
T ss_pred             EEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC-----------------
Confidence            999999999999999854  46899999999999999999999998   99999999999998                 


Q ss_pred             ccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 010432          291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR  370 (511)
Q Consensus       291 ~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~  370 (511)
                              .++.+||+|||+++........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       176 --------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (321)
T 2c30_A          176 --------LDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS  245 (321)
T ss_dssp             --------TTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             --------CCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                    4778999999999876543221  234679999999999999999999999999999999999999997543


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..   .........          ..+.+.  .....+..+.+||.+||+.||.+|||+.+++++.
T Consensus       246 ~~---~~~~~~~~~----------~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp  296 (321)
T 2c30_A          246 PV---QAMKRLRDS----------PPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP  296 (321)
T ss_dssp             HH---HHHHHHHHS----------SCCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             HH---HHHHHHhcC----------CCCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            21   111111110          001010  1112346789999999999999999999999854

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=4e-47  Score=389.00  Aligned_cols=257  Identities=20%  Similarity=0.277  Sum_probs=211.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|.+..         +++.||+|++..........+.+|+.+|++++|||||++++++.+.
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~---------~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~  120 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKA---------TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK  120 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS
T ss_pred             ccceEEEEEEecCCCEEEEEEEECC---------CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC
Confidence            3679999999999999999999875         6789999999876544456788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...+||||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++..            
T Consensus       121 ~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~------------  185 (387)
T 1kob_A          121 YEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETK------------  185 (387)
T ss_dssp             SEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESST------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecC------------
Confidence            9999999999999999999766667999999999999999999999998   9999999999999731            


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 ..+.+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       186 -----------~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  251 (387)
T 1kob_A          186 -----------KASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA  251 (387)
T ss_dssp             -----------TCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             -----------CCCceEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCC
Confidence                       246799999999987654332   233579999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .....   ........   ...        .+........+..+.+||.+||+.||.+|||+.+++++-
T Consensus       252 ~~~~~---~~~~~i~~---~~~--------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp  306 (387)
T 1kob_A          252 GEDDL---ETLQNVKR---CDW--------EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP  306 (387)
T ss_dssp             CSSHH---HHHHHHHH---CCC--------CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred             CCCHH---HHHHHHHh---CCC--------CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence            64321   11111100   000        001111122357889999999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3e-47  Score=390.37  Aligned_cols=257  Identities=24%  Similarity=0.367  Sum_probs=204.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      .++|+++++||+|+||+||+|+++.         +++.||||+++......   ...+.+|..+|.++ +|||||+++++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~---------~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~  121 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKK---------TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC  121 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE
Confidence            4579999999999999999999876         68899999998653222   23578899999887 89999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +.+.+.+|||||||++|+|..++... ..+++..++.++.||+.||+|||+++   ||||||||+||||+          
T Consensus       122 ~~~~~~~~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~----------  187 (396)
T 4dc2_A          122 FQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLD----------  187 (396)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC----------
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEC----------
Confidence            99999999999999999999998654 46999999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                     .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||++|||++|+
T Consensus       188 ---------------~~g~ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~  250 (396)
T 4dc2_A          188 ---------------SEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR  250 (396)
T ss_dssp             ---------------TTSCEEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCCCEEEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence                           478899999999986433222  234578999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCc--hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 010432          364 RSMDKNRPNGE--HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~------~eil~~  435 (511)
                      .||........  ...........         ...  ...++...+..+.+||.+||+.||.+||++      .+|+++
T Consensus       251 ~Pf~~~~~~~~~~~~~~~~~~~~i---------~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          251 SPFDIVGSSDNPDQNTEDYLFQVI---------LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             CSSTTTTC------CCHHHHHHHH---------HHC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             CCCcccccccccchhhHHHHHHHH---------hcc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence            99975322111  00000000000         000  011222335788999999999999999986      566654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=5.8e-47  Score=376.90  Aligned_cols=267  Identities=24%  Similarity=0.315  Sum_probs=203.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|+++++||+|+||+||+|++.          +++.||||++......  ....+.+|+.+|++++||||+++++++.
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   89 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDS----------QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH   89 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEET----------TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HhhhHhhhhccCCCCeEEEEEEEC----------CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc
Confidence            368999999999999999999874          3679999999755322  2356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..+||||||+ |+|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus        90 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~------------  153 (311)
T 3niz_A           90 SERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLIN------------  153 (311)
T ss_dssp             CSSCEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC------------
T ss_pred             cCCEEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEEC------------
Confidence            9999999999996 5899888777677999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++........  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus       154 -------------~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~  218 (311)
T 3niz_A          154 -------------SDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP  218 (311)
T ss_dssp             -------------TTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCCCEEEccCcCceecCCCccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCC
Confidence                         4778999999999876533221  334578999999999876 568999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhh-----cccccc-------ccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHL-----GERRRF-------YRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ||...........+.......     ......       ................+.++.+||.+||+.||.+|||+.|+
T Consensus       219 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  298 (311)
T 3niz_A          219 LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA  298 (311)
T ss_dssp             SCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             CCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            998765443322111110000     000000       00000000000011224678999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       299 l~h  301 (311)
T 3niz_A          299 MNH  301 (311)
T ss_dssp             HTS
T ss_pred             hcC
Confidence            974

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.8e-46  Score=368.38  Aligned_cols=261  Identities=29%  Similarity=0.539  Sum_probs=207.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccH-------HHHHHHHHHHhCCCCCCcceE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-------KEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~-------~~~~~E~~il~~l~H~nIv~l  200 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++........       +.+.+|+.++++++||||+++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   88 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVK---------DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL   88 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETT---------TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hccceehhccccCCceeEEEEEEcC---------CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhh
Confidence            3679999999999999999999875         577999999976543221       568899999999999999999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ++++.+..  ++||||+++|+|.+++......+++..++.++.||+.||+|||+++ ++|+||||||+|||++..+..  
T Consensus        89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~--  163 (287)
T 4f0f_A           89 YGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDEN--  163 (287)
T ss_dssp             EEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTT--
T ss_pred             heeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCC--
Confidence            99986554  7999999999999999877778999999999999999999999976 559999999999999842110  


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc--cCCCCccccchhHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DIwSlGvil~e  358 (511)
                                        ....+||+|||+++.....     .....||+.|+|||++.  ...++.++|||||||++||
T Consensus       164 ------------------~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~  220 (287)
T 4f0f_A          164 ------------------APVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT  220 (287)
T ss_dssp             ------------------CSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHH
T ss_pred             ------------------CceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHH
Confidence                              1334999999999864432     33467999999999984  5567899999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      |++|+.||............ ....             ......++...+..+.+||.+||+.||.+|||+.+|++.|+.
T Consensus       221 l~~g~~pf~~~~~~~~~~~~-~~~~-------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          221 ILTGEGPFDEYSYGKIKFIN-MIRE-------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHSSCTTTTCCCCHHHHHH-HHHH-------------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHcCCCCCccccccHHHHHH-HHhc-------------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            99999999765432211111 1100             011112222345789999999999999999999999999976


Q ss_pred             C
Q 010432          439 L  439 (511)
Q Consensus       439 l  439 (511)
                      +
T Consensus       287 l  287 (287)
T 4f0f_A          287 L  287 (287)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=7.3e-47  Score=393.68  Aligned_cols=259  Identities=21%  Similarity=0.264  Sum_probs=209.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+..         +|+.||+|++......  ....+.+|+.+|++++|||||++++++
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~---------~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~   79 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVL---------AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI   79 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETT---------TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECC---------CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE
Confidence            45689999999999999999999876         6889999999876533  234688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+++..|||||||.+|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++...        
T Consensus        80 ~~~~~~~lv~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~--------  147 (444)
T 3soa_A           80 SEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKL--------  147 (444)
T ss_dssp             ECSSEEEEEECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSS--------
T ss_pred             EECCEEEEEEEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccC--------
Confidence            9999999999999999999999765 46999999999999999999999998   99999999999998421        


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    +++.+||+|||+++........  .....||+.|+|||++.+..|+.++|||||||++|+|++|..
T Consensus       148 --------------~~~~vkL~DFG~a~~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~  211 (444)
T 3soa_A          148 --------------KGAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP  211 (444)
T ss_dssp             --------------TTCCEEECCCSSCBCCCTTCCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCcEEEccCceeEEecCCCce--eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCC
Confidence                          2567999999999876543322  234689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||......   .+......   ...   ..     ........++.+.+||.+||+.||.+|||+.+++++-
T Consensus       212 Pf~~~~~~---~~~~~i~~---~~~---~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp  269 (444)
T 3soa_A          212 PFWDEDQH---RLYQQIKA---GAY---DF-----PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP  269 (444)
T ss_dssp             SCCCSSHH---HHHHHHHH---TCC---CC-----CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred             CCCCccHH---HHHHHHHh---CCC---CC-----CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence            99754321   11111111   000   00     0111112357789999999999999999999999853

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=6e-47  Score=379.34  Aligned_cols=258  Identities=22%  Similarity=0.306  Sum_probs=207.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|++..         +|..||||++......      ..+.+.+|+.+|++++||||++++
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   80 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKS---------TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH   80 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETT---------TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECC---------CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence            3568999999999999999999875         6789999999765332      356789999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++...+..++|||||++|+|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+|||++..+.    
T Consensus        81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~----  152 (326)
T 2y0a_A           81 EVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNV----  152 (326)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSS----
T ss_pred             EEEEeCCEEEEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCC----
Confidence            999999999999999999999999954 357999999999999999999999998   999999999999984211    


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ....+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       153 -----------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  212 (326)
T 2y0a_A          153 -----------------PKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  212 (326)
T ss_dssp             -----------------SSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH
Confidence                             123799999999987654322   234579999999999998999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |..||......   ........   ....        +........+..+.+||.+||+.||.+|||+.+++++-
T Consensus       213 g~~pf~~~~~~---~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  273 (326)
T 2y0a_A          213 GASPFLGDTKQ---ETLANVSA---VNYE--------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP  273 (326)
T ss_dssp             SCCSSCCSSHH---HHHHHHHH---TCCC--------CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred             CcCCCCCCCHH---HHHHHHHh---cCCC--------cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence            99999754321   11111100   0000        00000011246789999999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=5e-48  Score=393.55  Aligned_cols=267  Identities=26%  Similarity=0.376  Sum_probs=209.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++++.||+|+||+||+|++....    ...++..||||+++.... .....+.+|+.+|++++|||||++++++..
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMP----NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  145 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC---------CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCC----CCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            467899999999999999999975321    123678999999975432 233568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ....+||||||++|+|.+++....      ..+++..++.++.||+.||+|||+++   ||||||||+||||+..+    
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~----  218 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPG----  218 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSS----
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCC----
Confidence            999999999999999999997532      35899999999999999999999998   99999999999998422    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .+..+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+
T Consensus       219 ------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ell  280 (367)
T 3l9p_A          219 ------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF  280 (367)
T ss_dssp             ------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence                              24569999999997532221111223456899999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          361 T-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       361 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      + |..||......   .+.......              .....+..++..+.+||.+||+.||.+||++.+|+++|+.+
T Consensus       281 t~g~~pf~~~~~~---~~~~~i~~~--------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          281 SLGYMPYPSKSNQ---EVLEFVTSG--------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTSCCSSTTCCHH---HHHHHHHTT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCHH---HHHHHHHcC--------------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            8 99999754321   111111110              00111222356789999999999999999999999999765


Q ss_pred             C
Q 010432          440 P  440 (511)
Q Consensus       440 ~  440 (511)
                      .
T Consensus       344 ~  344 (367)
T 3l9p_A          344 T  344 (367)
T ss_dssp             H
T ss_pred             h
Confidence            3

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.4e-47  Score=371.15  Aligned_cols=255  Identities=27%  Similarity=0.438  Sum_probs=209.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|++..          +..||||++..... ..+.+.+|+.++++++||||+++++++.+.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   77 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLN----------KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ   77 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT----------TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             hhhceeeheecCCCccEEEEEEecC----------CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4678999999999999999998853          56899999986543 346789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++              
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~--------------  140 (269)
T 4hcu_A           78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG--------------  140 (269)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC--------------
T ss_pred             CceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEc--------------
Confidence            9999999999999999999776677999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus       141 -----------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~  208 (269)
T 4hcu_A          141 -----------ENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  208 (269)
T ss_dssp             -----------GGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             -----------CCCCEEeccccccccccccccc-cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCC
Confidence                       3678999999999865432211 1223457889999999999999999999999999999999 99999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ......   .........          .    ....+...+..+.+|+.+||+.||.+||++.+++++|+.+
T Consensus       209 ~~~~~~---~~~~~~~~~----------~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          209 ENRSNS---EVVEDISTG----------F----RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             TTCCHH---HHHHHHHTT----------C----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCHH---HHHHHHhcC----------c----cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence            754321   111111100          0    1111112256789999999999999999999999999765

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.2e-46  Score=380.96  Aligned_cols=257  Identities=24%  Similarity=0.313  Sum_probs=205.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-----cccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      .++|++.+.||+|+||+||+|+++.         +++.||||++....     ....+.+.+|+.+|+.++|||||++++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~   93 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRE---------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLE   93 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECC---------CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            3579999999999999999999876         67899999986421     123567899999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ++..++..|||||||++|+|.+++...   ...+++..+..++.||+.||.|||+++   |+||||||+|||++..+   
T Consensus        94 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~---  167 (351)
T 3c0i_A           94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKE---  167 (351)
T ss_dssp             EEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSS---
T ss_pred             EEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCC---
Confidence            999999999999999999999887542   345899999999999999999999998   99999999999998421   


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         ....+||+|||+++.......  .....+||+.|+|||++.+..|+.++||||||||+|||
T Consensus       168 -------------------~~~~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  226 (351)
T 3c0i_A          168 -------------------NSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL  226 (351)
T ss_dssp             -------------------TTCCEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             -------------------CCCcEEEecCcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHH
Confidence                               234599999999987655332  13346799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ++|+.||....    ..+.....   .....    ..+....    ..+..+.+||.+||+.||.+|||+.+++++
T Consensus       227 l~g~~pf~~~~----~~~~~~i~---~~~~~----~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          227 LSGCLPFYGTK----ERLFEGII---KGKYK----MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HHSSCSSCSSH----HHHHHHHH---HTCCC----CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHCCCCCCCcH----HHHHHHHH---cCCCC----CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            99999997532    11111110   00000    0000001    124678999999999999999999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=6.3e-47  Score=384.64  Aligned_cols=257  Identities=23%  Similarity=0.322  Sum_probs=208.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+..         ++..||||++......  ..+.+.+|+.+|++|+|||||++++++
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~   97 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKT---------TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI   97 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECC---------CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            35679999999999999999999875         6789999999865433  235688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+..|+|||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++...        
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~--------  165 (362)
T 2bdw_A           98 QEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKA--------  165 (362)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSS--------
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCC--------
Confidence            9999999999999999999998654 46899999999999999999999998   99999999999998421        


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    ++..+||+|||+++.......   .....||+.|+|||++.+..|+.++|||||||++|+|++|..
T Consensus       166 --------------~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  228 (362)
T 2bdw_A          166 --------------KGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP  228 (362)
T ss_dssp             --------------TTCCEEECCCTTCBCCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeecCcceEecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCC
Confidence                          245699999999987654332   234679999999999999899999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||.....   ..+.......   ...   .     ........+..+.+||.+||+.||.+||++.+++++
T Consensus       229 Pf~~~~~---~~~~~~i~~~---~~~---~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          229 PFWDEDQ---HRLYAQIKAG---AYD---Y-----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             SSCCSSH---HHHHHHHHHT---CCC---C-----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCCCCCH---HHHHHHHHhC---CCC---C-----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            9975432   1111111110   000   0     000011235678999999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.8e-47  Score=383.26  Aligned_cols=262  Identities=23%  Similarity=0.361  Sum_probs=205.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||+||+|++..++..     ....||+|.+.... ....+.+.+|+.+|++++||||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC---------CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCce-----EEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            35789999999999999999998653221     23357899886543 2345679999999999999999999999987


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +. .++||||+.+|+|.+++......+++..++.|+.||+.||.|||+++   |+||||||+|||++             
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~-------------  151 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVK-------------  151 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE-------------
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEEC-------------
Confidence            65 78999999999999999887778999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus       152 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  219 (327)
T 3poz_A          152 ------------TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ------------ETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------CCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence                        477899999999987654443333344567899999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |........   ......              ......+..++..+.+|+.+||+.||.+||++.+|+++|+.+.
T Consensus       220 ~~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          220 YDGIPASEI---SSILEK--------------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             TTTCCGGGH---HHHHHT--------------TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             ccCCCHHHH---HHHHHc--------------CCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            976543221   111110              0011112223567899999999999999999999999987653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=6.4e-46  Score=368.09  Aligned_cols=281  Identities=37%  Similarity=0.617  Sum_probs=224.7

Q ss_pred             ccccChHHHHHHhcCCCCC------CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC----cccHHHHHHH
Q 010432          116 LRKFTFNDLKLATRNFRPE------SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG----LQGHKEWLAE  185 (511)
Q Consensus       116 ~~~~~~~~~~~~~~~y~~~------~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E  185 (511)
                      ...+++.++...+++|...      +.||+|+||.||+|++           ++..||||++....    ....+.+.+|
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~~E   80 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----------NNTTVAVKKLAAMVDITTEELKQQFDQE   80 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-----------SSCEEEEEEECCCTTSCTTTHHHHHHHH
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-----------CCceEEEEEEecccCcchHHHHHHHHHH
Confidence            4567888888888888777      8999999999999985           35689999997542    1224578899


Q ss_pred             HHHHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 010432          186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR  263 (511)
Q Consensus       186 ~~il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHr  263 (511)
                      +.++++++||||+++++++...+..++||||+++|+|.+++...  ...+++..++.++.||+.||.|||+++   |+||
T Consensus        81 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~  157 (307)
T 2nru_A           81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHR  157 (307)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECS
T ss_pred             HHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecC
Confidence            99999999999999999999999999999999999999998632  346899999999999999999999998   9999


Q ss_pred             ccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC
Q 010432          264 DFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL  343 (511)
Q Consensus       264 DLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~  343 (511)
                      ||||+|||++                         .++.+||+|||+++...............||+.|+|||++.+ .+
T Consensus       158 dlkp~Nili~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~  211 (307)
T 2nru_A          158 DIKSANILLD-------------------------EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EI  211 (307)
T ss_dssp             CCCGGGEEEC-------------------------TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EE
T ss_pred             CCCHHHEEEc-------------------------CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CC
Confidence            9999999998                         477899999999987655433333344679999999998764 58


Q ss_pred             CccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       344 ~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +.++|||||||++|+|++|..||...........  +..........+...+++.+ ...+...+..+.+|+.+||+.||
T Consensus       212 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p  288 (307)
T 2nru_A          212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD--IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKK  288 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH--HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSST
T ss_pred             CccchhHHHHHHHHHHHHCCCCcccCcchHHHHH--HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCc
Confidence            9999999999999999999999986544322111  11111111112222333322 33456778899999999999999


Q ss_pred             CCCCCHHHHHHHhcCC
Q 010432          424 KARPLMSEVVEALKPL  439 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l  439 (511)
                      .+||++.+|+++|+.+
T Consensus       289 ~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          289 NKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             TTSCCHHHHHHHHHHH
T ss_pred             ccCcCHHHHHHHHHHH
Confidence            9999999999999765

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.2e-47  Score=389.63  Aligned_cols=262  Identities=24%  Similarity=0.416  Sum_probs=200.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|++.+.||+|+||.||+|++....      .++..||||+++.... ...+.|.+|+.+|++++||||+++++++..
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~  117 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPS------KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK  117 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTT------SCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCC------CCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence            358999999999999999999876322      1567899999976532 234578999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..+||||||++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++             
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~-------------  181 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILIN-------------  181 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-------------
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEc-------------
Confidence            99999999999999999999876667999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                  .++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||+||||++ |+.
T Consensus       182 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~  249 (373)
T 2qol_A          182 ------------SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER  249 (373)
T ss_dssp             ------------TTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-C
T ss_pred             ------------CCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCC
Confidence                        47789999999998765432211 1122346788999999999999999999999999999998 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ||......   .+.......              .....+..++..+.+||.+||+.||.+||++.+|++.|+.+.
T Consensus       250 P~~~~~~~---~~~~~i~~~--------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          250 PYWEMSNQ---DVIKAVDEG--------------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             TTTTCCHH---HHHHHHHTT--------------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHH---HHHHHHHcC--------------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            99754321   111111110              011112233577899999999999999999999999998763

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=3.4e-47  Score=383.75  Aligned_cols=251  Identities=28%  Similarity=0.423  Sum_probs=205.1

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      ...++|++.++||+|+||.||+|+++.         +++.||||+++...   ......+.+|..+|..+ +||||++++
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~   84 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF   84 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETT---------TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEE
Confidence            456789999999999999999999875         68899999997542   12345678899999876 999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++.+.+..|||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++        
T Consensus        85 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~--------  152 (345)
T 1xjd_A           85 CTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD--------  152 (345)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC--------
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEEC--------
Confidence            9999999999999999999999999654 46899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||+++........  ....+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus       153 -----------------~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  213 (345)
T 1xjd_A          153 -----------------KDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI  213 (345)
T ss_dssp             -----------------TTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEEeEChhhhhcccCCCc--ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc
Confidence                             4778999999999865432221  345689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVE  434 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~-eil~  434 (511)
                      |+.||......   .+...+..   .        .+.    ++...+..+.+||.+||+.||.+||++. +|++
T Consensus       214 g~~Pf~~~~~~---~~~~~i~~---~--------~~~----~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          214 GQSPFHGQDEE---ELFHSIRM---D--------NPF----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             SSCSSCCSSHH---HHHHHHHH---C--------CCC----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCCCCCCCCHH---HHHHHHHh---C--------CCC----CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            99999754321   11111110   0        011    1122357789999999999999999997 6654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=5.5e-47  Score=368.33  Aligned_cols=258  Identities=26%  Similarity=0.399  Sum_probs=212.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|.+..          +..||||+++.... ....+.+|+.++.+++||||+++++++..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   74 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKG----------QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSK   74 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT----------TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheeeeeeeccCCCceEEEEEecC----------ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence            34689999999999999999998753          56799999986543 34678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....++||||+++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~-------------  138 (268)
T 3sxs_A           75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVD-------------  138 (268)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEEC-------------
T ss_pred             CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEEC-------------
Confidence            99999999999999999999776667999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus       139 ------------~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p  205 (268)
T 3sxs_A          139 ------------RDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP  205 (268)
T ss_dssp             ------------TTCCEEECCTTCEEECCTTCEE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCT
T ss_pred             ------------CCCCEEEccCccceecchhhhh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCC
Confidence                        4778999999999876554322 2233457788999999998899999999999999999999 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |.......   ......    ...   ..       ..+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus       206 ~~~~~~~~---~~~~~~----~~~---~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          206 YDLYTNSE---VVLKVS----QGH---RL-------YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             TTTSCHHH---HHHHHH----TTC---CC-------CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             ccccChHH---HHHHHH----cCC---CC-------CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            97543211   111100    000   00       0111124678999999999999999999999999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-46  Score=375.15  Aligned_cols=247  Identities=27%  Similarity=0.374  Sum_probs=205.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++++.||+|+||.||+|++..         +|+.||||+++...   ....+.+.+|+.+|+.++||||+++++++
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~   75 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRH---------NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF   75 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE
Confidence            3579999999999999999999875         67899999997542   23345678999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+..|+|||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++           
T Consensus        76 ~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~-----------  140 (318)
T 1fot_A           76 QDAQQIFMIMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLD-----------  140 (318)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEEC-----------
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEc-----------
Confidence            9999999999999999999999654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.....     ....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       141 --------------~~g~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  201 (318)
T 1fot_A          141 --------------KNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT  201 (318)
T ss_dssp             --------------TTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCC
Confidence                          4788999999999875432     234679999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      ||......   ....   .......            .++...+..+.+||.+||+.||.+||     ++.+|+++
T Consensus       202 pf~~~~~~---~~~~---~i~~~~~------------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          202 PFYDSNTM---KTYE---KILNAEL------------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             TTCCSSHH---HHHH---HHHHCCC------------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCHH---HHHH---HHHhCCC------------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            99754321   1111   1111100            11122356789999999999999999     88888864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=8e-48  Score=379.71  Aligned_cols=275  Identities=24%  Similarity=0.356  Sum_probs=208.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      .++|++++.||+|+||+||+|++...     ...+++.||||++........+.+.+|+.+|++++||||+++++++.. 
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   83 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPL-----QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA   83 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTT-----CSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecc-----cCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            46899999999999999999986431     123688999999987655555678999999999999999999999865 


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       ....++|||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~------------  148 (295)
T 3ugc_A           84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVE------------  148 (295)
T ss_dssp             HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEE------------
T ss_pred             CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEc------------
Confidence             35689999999999999999876667999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++........ .......||..|+|||++.+..++.++|||||||++|||++|..
T Consensus       149 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  215 (295)
T 3ugc_A          149 -------------NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  215 (295)
T ss_dssp             -------------ETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred             -------------CCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccc
Confidence                         4778999999999876543221 12233467888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccc---cccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGER---RRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||.....    .............   ......+........+..++..+.+||.+||+.||.+|||+.+|++.|+.+
T Consensus       216 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          216 KSKSPPA----EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             TTCSHHH----HHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccCCChH----HHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            9864211    0000000000000   000001111111122334467899999999999999999999999998765

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.2e-47  Score=396.30  Aligned_cols=264  Identities=20%  Similarity=0.244  Sum_probs=211.4

Q ss_pred             hHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCc
Q 010432          121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNL  197 (511)
Q Consensus       121 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nI  197 (511)
                      +.++....++|+++++||+|+||+||+|+++.         +++.||||+++....   .....+.+|+.+|..++||||
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~---------~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~I  136 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKN---------ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWI  136 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTB
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcC---------CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCE
Confidence            44555667899999999999999999999876         678999999975321   112237889999999999999


Q ss_pred             ceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          198 VKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       198 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      |+++++|.+.+.+|||||||++|+|.+++......+++..++.++.||+.||.|||+++   ||||||||+||||+    
T Consensus       137 v~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~----  209 (437)
T 4aw2_A          137 TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMD----  209 (437)
T ss_dssp             CCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC----
T ss_pred             EEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEc----
Confidence            99999999999999999999999999999775668999999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSF  352 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSl  352 (511)
                                           .++.+||+|||+|+........ .....+||+.|||||++.     ...|+.++|||||
T Consensus       210 ---------------------~~g~vkL~DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSl  267 (437)
T 4aw2_A          210 ---------------------MNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL  267 (437)
T ss_dssp             ---------------------TTSCEEECCCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHH
T ss_pred             ---------------------CCCCEEEcchhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHH
Confidence                                 4788999999999876543322 233468999999999987     5679999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHH
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMS  430 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~  430 (511)
                      ||++|||++|+.||........   ...+.   ....   ...-+...    ...+..+.+||.+||..+|++  ||++.
T Consensus       268 Gvil~elltG~~Pf~~~~~~~~---~~~i~---~~~~---~~~~p~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~  334 (437)
T 4aw2_A          268 GVCMYEMLYGETPFYAESLVET---YGKIM---NHKE---RFQFPTQV----TDVSENAKDLIRRLICSREHRLGQNGIE  334 (437)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHH---HHHHH---THHH---HCCCCSSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTH
T ss_pred             HHHHHHHHhCCCCCCCCChhHH---HHhhh---hccc---cccCCccc----ccCCHHHHHHHHHHhcccccccCCCCHH
Confidence            9999999999999976432211   11110   0000   00001100    113577899999999988888  99999


Q ss_pred             HHHHH
Q 010432          431 EVVEA  435 (511)
Q Consensus       431 eil~~  435 (511)
                      ||+++
T Consensus       335 eil~H  339 (437)
T 4aw2_A          335 DFKKH  339 (437)
T ss_dssp             HHHTS
T ss_pred             HHhCC
Confidence            99985

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3.3e-46  Score=374.44  Aligned_cols=266  Identities=18%  Similarity=0.173  Sum_probs=210.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++......  ..+.+|+.++++| +|+||+++++++..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~~h~~i~~~~~~~~~   76 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLY---------TNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGIPQVYYFGPC   76 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETT---------TTEEEEEEEEETTCSS--CCHHHHHHHHHHHCSCTTSCCEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECC---------CCcEEEEEEeccccch--HHHHHHHHHHHHhhCCCCCCEEEEEEec
Confidence            3679999999999999999999865         6889999999765332  3578999999999 99999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..+|||||+ +++|.+++......+++..++.|+.||+.||+|||+++   ||||||||+|||++..+..        
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~--------  144 (330)
T 2izr_A           77 GKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNK--------  144 (330)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGT--------
T ss_pred             CCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCC--------
Confidence            99999999999 99999999876668999999999999999999999998   9999999999999852210        


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                  ....+||+|||+++.........     ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       145 ------------~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~  212 (330)
T 2izr_A          145 ------------TQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLR  212 (330)
T ss_dssp             ------------CTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhc
Confidence                        12239999999998754432211     1234689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+.||......................  .....    .    ...+ .+.+|+..||+.||.+||++.+|++.|+.+
T Consensus       213 g~~Pf~~~~~~~~~~~~~~i~~~~~~~--~~~~~----~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          213 GSLPWQGLKADTLKERYQKIGDTKRAT--PIEVL----C----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             SSCTTTTCCCSSHHHHHHHHHHHHHHS--CHHHH----T----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             CCCCccccccccHHHHHHHHHhhhccC--CHHHH----h----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            999998765443322222211100000  00000    0    0113 789999999999999999999999988754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-47  Score=389.81  Aligned_cols=268  Identities=26%  Similarity=0.373  Sum_probs=215.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|.+.+.||+|+||.||+|++...+.  .....+..||||+++..... ....+.+|+++++++ +|||||++++++
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDK--DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSST--TCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccc--cccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            34689999999999999999999754221  11224578999999765432 235688999999999 999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      ..++..+||||||++|+|.+++....               ..+++..++.|+.||+.||.|||+++   |+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcce
Confidence            99999999999999999999997643               35899999999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      |||+                         .++.+||+|||+++...............||+.|+|||++.+..++.++||
T Consensus       222 Ill~-------------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  276 (382)
T 3tt0_A          222 VLVT-------------------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  276 (382)
T ss_dssp             EEEC-------------------------TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred             EEEc-------------------------CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence            9998                         477899999999987655433333344568899999999999999999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |..||......   .+.......              .....+..++..+.+||.+||+.||.+||+
T Consensus       277 wslG~il~ellt~g~~p~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  339 (382)
T 3tt0_A          277 WSFGVLLWEIFTLGGSPYPGVPVE---ELFKLLKEG--------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPT  339 (382)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHHTT--------------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC--------------CCCCCCccCCHHHHHHHHHHcCCChhhCcC
Confidence            999999999999 99999754321   111111110              011111223577899999999999999999


Q ss_pred             HHHHHHHhcCCCC
Q 010432          429 MSEVVEALKPLPN  441 (511)
Q Consensus       429 ~~eil~~L~~l~~  441 (511)
                      +.+|+++|+.+..
T Consensus       340 ~~ell~~L~~~~~  352 (382)
T 3tt0_A          340 FKQLVEDLDRIVA  352 (382)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.8e-46  Score=374.42  Aligned_cols=268  Identities=25%  Similarity=0.354  Sum_probs=190.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++++.||+|+||.||+|++..         +|+.||||+++.... .....+.+|+.+|++++|||||++++++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   74 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKT---------TGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT   74 (317)
T ss_dssp             ---------------CEEEEEECSS---------SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC
T ss_pred             ccceeEeeEECCCCCEEEEEEEECC---------CCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE
Confidence            3579999999999999999998765         678999999976543 233678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ++..+||||||+ |+|.+++...     ...+++..+..++.||+.||.|||+++   |+||||||+|||++        
T Consensus        75 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~--------  142 (317)
T 2pmi_A           75 ENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLIN--------  142 (317)
T ss_dssp             TTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC--------
T ss_pred             CCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEc--------
Confidence            999999999997 6999988643     245899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ell  360 (511)
                                       .++.+||+|||+++........  .....||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus       143 -----------------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~  203 (317)
T 2pmi_A          143 -----------------KRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI  203 (317)
T ss_dssp             -----------------TTCCEEECCCSSCEETTSCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEECcCccceecCCCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHH
Confidence                             4778999999999876433221  234578999999999876 46899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhh-----hcc---ccccccccCCc--------cCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPH-----LGE---RRRFYRLIDPR--------LEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      +|+.||...........+......     +..   ...+...+...        +........+..+.+||.+||+.||.
T Consensus       204 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  283 (317)
T 2pmi_A          204 TGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPD  283 (317)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGG
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcc
Confidence            999999765432111111000000     000   00000000000        00001112346789999999999999


Q ss_pred             CCCCHHHHHHH
Q 010432          425 ARPLMSEVVEA  435 (511)
Q Consensus       425 ~RPs~~eil~~  435 (511)
                      +|||+.+++++
T Consensus       284 ~Rpt~~e~l~h  294 (317)
T 2pmi_A          284 MRLSAKQALHH  294 (317)
T ss_dssp             GSCCHHHHTTS
T ss_pred             cCCCHHHHhCC
Confidence            99999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-46  Score=371.26  Aligned_cols=251  Identities=24%  Similarity=0.353  Sum_probs=197.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------------------------cHHH
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------------------------GHKE  181 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------------------------~~~~  181 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++......                          ..+.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNEN---------DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQ   82 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETT---------TTEEEEEEEEECC-------------------------------CH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECC---------CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHH
Confidence            3579999999999999999999865         6789999999765321                          1245


Q ss_pred             HHHHHHHHhCCCCCCcceEeeEEEe--CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010432          182 WLAEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP  259 (511)
Q Consensus       182 ~~~E~~il~~l~H~nIv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~  259 (511)
                      +.+|+.+|++++||||+++++++..  .+..+|||||+++|+|.+++.  ...+++..++.++.||+.||+|||+++   
T Consensus        83 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---  157 (298)
T 2zv2_A           83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQK---  157 (298)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            8899999999999999999999987  568899999999999988653  346899999999999999999999998   


Q ss_pred             eEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc
Q 010432          260 VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM  339 (511)
Q Consensus       260 iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~  339 (511)
                      |+||||||+|||++                         .++.+||+|||+++.......  ......||+.|+|||++.
T Consensus       158 ivH~Dlkp~Nil~~-------------------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~  210 (298)
T 2zv2_A          158 IIHRDIKPSNLLVG-------------------------EDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLS  210 (298)
T ss_dssp             EECCCCCGGGEEEC-------------------------TTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCC
T ss_pred             eeccCCCHHHEEEC-------------------------CCCCEEEecCCCccccccccc--cccCCcCCccccChhhhc
Confidence            99999999999998                         477899999999987654332  233467999999999987


Q ss_pred             cCC---CCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHH
Q 010432          340 TGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA  416 (511)
Q Consensus       340 ~~~---~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~  416 (511)
                      +..   ++.++|||||||++|||++|+.||......   .+......   ....   .  +     .....+..+.+||.
T Consensus       211 ~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~~---~~~~---~--~-----~~~~~~~~l~~li~  274 (298)
T 2zv2_A          211 ETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM---CLHSKIKS---QALE---F--P-----DQPDIAEDLKDLIT  274 (298)
T ss_dssp             TTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHH---CCCC---C--C-----SSSCCCHHHHHHHH
T ss_pred             cCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH---HHHHHHhc---ccCC---C--C-----CccccCHHHHHHHH
Confidence            655   478899999999999999999999754211   11111110   0000   0  0     01122467899999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 010432          417 HCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       417 ~cl~~dP~~RPs~~eil~~  435 (511)
                      +||+.||.+||++.+|+++
T Consensus       275 ~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          275 RMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHTCSCTTTSCCHHHHTTC
T ss_pred             HHhhcChhhCCCHHHHhcC
Confidence            9999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.9e-47  Score=381.95  Aligned_cols=267  Identities=25%  Similarity=0.373  Sum_probs=213.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ...++|++.+.||+|+||.||+|++.....    ..++..||||+++..... ....+.+|+.+|++++||||+++++++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLP----YEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSST----TSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCC----CCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            345789999999999999999999864211    124679999999865432 245688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS-----------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVI  261 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~ii  261 (511)
                      ...+..+||||||++|+|.+++....                       ..+++..++.++.||+.||.|||+++   |+
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---iv  196 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FV  196 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            99999999999999999999997532                       56899999999999999999999998   99


Q ss_pred             ecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC
Q 010432          262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG  341 (511)
Q Consensus       262 HrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~  341 (511)
                      ||||||+|||++                         .++.+||+|||+++...............||+.|+|||++.+.
T Consensus       197 H~Dlkp~NIl~~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  251 (343)
T 1luf_A          197 HRDLATRNCLVG-------------------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  251 (343)
T ss_dssp             CSCCSGGGEEEC-------------------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             cCCCCcceEEEC-------------------------CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccC
Confidence            999999999998                         4778999999999865433222223345789999999999999


Q ss_pred             CCCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcc
Q 010432          342 HLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       342 ~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~  420 (511)
                      .++.++|||||||++|||++ |..||......   .+......    ..          ....+...+..+.+||.+||+
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~~~~~----~~----------~~~~~~~~~~~l~~li~~~l~  314 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE---EVIYYVRD----GN----------ILACPENCPLELYNLMRLCWS  314 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHHT----TC----------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCCCChH---HHHHHHhC----CC----------cCCCCCCCCHHHHHHHHHHcc
Confidence            99999999999999999999 99999754321   11111110    00          001122335678999999999


Q ss_pred             cCCCCCCCHHHHHHHhcCCCC
Q 010432          421 RDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       421 ~dP~~RPs~~eil~~L~~l~~  441 (511)
                      .||.+||++.+|++.|+.+..
T Consensus       315 ~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          315 KLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             SSGGGSCCHHHHHHHHHHTTC
T ss_pred             cCcccCCCHHHHHHHHHHHHh
Confidence            999999999999999987754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=6.7e-47  Score=370.60  Aligned_cols=260  Identities=24%  Similarity=0.361  Sum_probs=199.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|++...+.      .+..||||++...... ..+.+.+|+.++++++||||+++++++ 
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-   85 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPEN------PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-   85 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--------CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCC------CceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-
Confidence            34689999999999999999999865322      4668999999765332 345688999999999999999999987 


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~------------  150 (281)
T 1mp8_A           86 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVS------------  150 (281)
T ss_dssp             CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEE------------
T ss_pred             ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEEC------------
Confidence            456789999999999999999877667999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       151 -------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~  216 (281)
T 1mp8_A          151 -------------SNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK  216 (281)
T ss_dssp             -------------ETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCCCEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCC
Confidence                         3678999999999876543222 1233467889999999998999999999999999999997 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||.......   ........    .          ....+...+..+.+|+.+||+.||.+||++.+|++.|+.+
T Consensus       217 pf~~~~~~~---~~~~i~~~----~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          217 PFQGVKNND---VIGRIENG----E----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             TTTTCCGGG---HHHHHHTT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcCCHHH---HHHHHHcC----C----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            997654321   11111100    0          0111223357889999999999999999999999998754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=6.5e-47  Score=381.50  Aligned_cols=258  Identities=22%  Similarity=0.297  Sum_probs=205.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|+++.         +++.||||++......    +.+|+++|.++ +||||+++++++.
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~   86 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKA---------TNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYD   86 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEE
Confidence            34679999999999999999999875         6889999999765432    34688888887 7999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++..|||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||+.....        
T Consensus        87 ~~~~~~lv~E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~--------  154 (342)
T 2qr7_A           87 DGKYVYVVTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESG--------  154 (342)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSC--------
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCC--------
Confidence            999999999999999999999654 46999999999999999999999998   999999999999863110        


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   ....+||+|||+++........  ....+||+.|+|||++.+..|+.++|||||||++|||++|..|
T Consensus       155 -------------~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  219 (342)
T 2qr7_A          155 -------------NPESIRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP  219 (342)
T ss_dssp             -------------SGGGEEECCCTTCEECBCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CcCeEEEEECCCcccCcCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCC
Confidence                         1346999999999876443221  3346799999999999888899999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..........+.......   ..        .+........+..+.+||.+||+.||.+||++.+++++
T Consensus       220 f~~~~~~~~~~~~~~i~~~---~~--------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          220 FANGPDDTPEEILARIGSG---KF--------SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             SCSSTTSCHHHHHHHHHHC---CC--------CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCCCCcCCHHHHHHHHccC---Cc--------ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            9764333222222211110   00        01111122335788999999999999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.3e-46  Score=397.83  Aligned_cols=261  Identities=25%  Similarity=0.391  Sum_probs=215.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .+...+|++.+.||+|+||.||+|++..         ++..||||+++.... ..+.|.+|+.+|++++|||||++++++
T Consensus       216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~---------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~  285 (495)
T 1opk_A          216 EMERTDITMKHKLGGGQYGEVYEGVWKK---------YSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVC  285 (495)
T ss_dssp             BCCGGGEEEEEESGGGTTSSEEEEEEGG---------GTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCHHHceeeeEecCCCCeEEEEEEEcC---------CCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            3445678999999999999999999875         577999999986543 357899999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      ...+..+||||||++|+|.+++... ...+++..++.++.||+.||+|||+++   ||||||||+||||+          
T Consensus       286 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~----------  352 (495)
T 1opk_A          286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVG----------  352 (495)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------
T ss_pred             ecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEC----------
Confidence            9999999999999999999999754 346899999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-C
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g  362 (511)
                                     .++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||+||||++ |
T Consensus       353 ---------------~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g  416 (495)
T 1opk_A          353 ---------------ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG  416 (495)
T ss_dssp             ---------------GGGCEEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             ---------------CCCcEEEeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCC
Confidence                           477899999999987654322 12223456789999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      ..||.......   +......              ......+..++..+.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       417 ~~p~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          417 MSPYPGIDLSQ---VYELLEK--------------DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CCSSTTCCGGG---HHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCCCCCCCHHH---HHHHHHc--------------CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            99997653221   1111110              11112223345789999999999999999999999999988753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.7e-46  Score=378.92  Aligned_cols=257  Identities=24%  Similarity=0.365  Sum_probs=203.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      .++|++++.||+|+||.||+|+++.         +++.||||+++......   ...+.+|+.+|.++ +|||||+++++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~   78 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKK---------TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC   78 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECC---------CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEE
Confidence            3579999999999999999999875         68899999998654322   34578899999988 89999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +.+.+..|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++          
T Consensus        79 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~----------  144 (345)
T 3a8x_A           79 FQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLD----------  144 (345)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC----------
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEC----------
Confidence            99999999999999999999999654 46899999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                     .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||++|||++|+
T Consensus       145 ---------------~~g~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  207 (345)
T 3a8x_A          145 ---------------SEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR  207 (345)
T ss_dssp             ---------------TTSCEEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCCCEEEEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCC
Confidence                           478899999999986433222  134468999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCch--hHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 010432          364 RSMDKNRPNGEH--NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~------~eil~~  435 (511)
                      .||.........  ..........         ...  ...++...+..+.+||.+||+.||.+||++      .+|+++
T Consensus       208 ~pf~~~~~~~~~~~~~~~~~~~~i---------~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          208 SPFDIVGSSDNPDQNTEDYLFQVI---------LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             CTTTTTTC-------CHHHHHHHH---------HHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             CCcCCcccccccccccHHHHHHHH---------HcC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence            999753221100  0000000000         000  001122335778999999999999999996      566553

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.5e-46  Score=378.32  Aligned_cols=247  Identities=25%  Similarity=0.305  Sum_probs=205.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++++.||+|+||.||+|++..         +|+.||||++....   ....+.+.+|+.+|+.++||||+++++++
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  110 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKE---------SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF  110 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECC---------CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4689999999999999999999875         67899999996542   23346788999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+..|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++           
T Consensus       111 ~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~-----------  175 (350)
T 1rdq_E          111 KDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLID-----------  175 (350)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-----------
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEEC-----------
Confidence            9999999999999999999999654 46899999999999999999999999   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.....     ....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       176 --------------~~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  236 (350)
T 1rdq_E          176 --------------QQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP  236 (350)
T ss_dssp             --------------TTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCC
Confidence                          4778999999999876442     234679999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      ||......   .+...+   ....        .    .++...+..+.+||.+||+.||.+||+     +.+|+++
T Consensus       237 Pf~~~~~~---~~~~~i---~~~~--------~----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          237 PFFADQPI---QIYEKI---VSGK--------V----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             SSCCSSHH---HHHHHH---HHCC--------C----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCHH---HHHHHH---HcCC--------C----CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            99754321   111111   1000        0    112223577899999999999999998     7888764

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.3e-47  Score=382.08  Aligned_cols=263  Identities=25%  Similarity=0.393  Sum_probs=207.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||+||+|++..++..     ....||+|.+..... .....+.+|+.++++++||||+++++++. 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGES-----IKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCS-----CCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCce-----EEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-
Confidence            35789999999999999999998763321     233588888864432 22345778999999999999999999886 


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||+.+|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~-------------  149 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLK-------------  149 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEES-------------
T ss_pred             CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEEC-------------
Confidence            45689999999999999999766567899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus       150 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          150 ------------SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             ------------SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence                        477899999999998765444433455678899999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |...........+.   ..    .          ....+..++..+.+||.+||+.||.+||++.+|+++|+.+..
T Consensus       218 ~~~~~~~~~~~~~~---~~----~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          218 YAGLRLAEVPDLLE---KG----E----------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             TTTSCTTHHHHHHH---TT----C----------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             ccccCHHHHHHHHH---cC----C----------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            98654332211111   00    0          000111123457799999999999999999999999987643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.1e-46  Score=379.50  Aligned_cols=257  Identities=21%  Similarity=0.259  Sum_probs=196.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++++.||+|+||+||+|++..         +++.||||++...... .+.+.+|+.+++.++|||||++++++...
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~   88 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKL---------TKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTP   88 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETT---------TCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECC---------CCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeC
Confidence            3579999999999999999999876         6789999999765433 35688999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..+||||||++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++..            
T Consensus        89 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~------------  152 (361)
T 3uc3_A           89 THLAIIMEYASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGS------------  152 (361)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSS------------
T ss_pred             CEEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCC------------
Confidence            9999999999999999998654 36999999999999999999999998   9999999999999841            


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCcc-ccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-SDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~-~DIwSlGvil~elltg~~pf  366 (511)
                                 ....+||+|||+++.......   .....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||
T Consensus       153 -----------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf  218 (361)
T 3uc3_A          153 -----------PAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF  218 (361)
T ss_dssp             -----------SSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             -----------CCceEEEeecCccccccccCC---CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCC
Confidence                       133599999999985433221   234579999999999988887665 89999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ..........  ..........          .........+..+.+||.+||+.||.+|||+.+++++-
T Consensus       219 ~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp  276 (361)
T 3uc3_A          219 EDPEEPRDYR--KTIQRILSVK----------YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHS  276 (361)
T ss_dssp             C----CCCHH--HHHHHHHTTC----------CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred             CCCccHHHHH--HHHHHHhcCC----------CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence            7654322211  1111111000          00000111246789999999999999999999999863

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-47  Score=392.56  Aligned_cols=263  Identities=21%  Similarity=0.239  Sum_probs=208.7

Q ss_pred             hHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCc
Q 010432          121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNL  197 (511)
Q Consensus       121 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nI  197 (511)
                      +.+.....++|+++++||+|+||.||+|+++.         +|+.||||++++...   .....+.+|+.+|..++||||
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~---------~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~I  123 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQ---------TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI  123 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTB
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCe
Confidence            34445567899999999999999999999875         688999999975321   112347889999999999999


Q ss_pred             ceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          198 VKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       198 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      +++++++.+.+.+|||||||++|+|.+++.+....+++..++.++.||+.||+|||+++   ||||||||+||||+    
T Consensus       124 v~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld----  196 (412)
T 2vd5_A          124 TQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLD----  196 (412)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC----
T ss_pred             eeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeec----
Confidence            99999999999999999999999999999766567999999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-------cCCCCccccch
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-------TGHLTSRSDVY  350 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-------~~~~~~~~DIw  350 (511)
                                           .++.+||+|||+++........ .....+||+.|+|||++.       ...|+.++|||
T Consensus       197 ---------------------~~g~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~Diw  254 (412)
T 2vd5_A          197 ---------------------RCGHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW  254 (412)
T ss_dssp             ---------------------TTSCEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHH
T ss_pred             ---------------------CCCCEEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhh
Confidence                                 4788999999999876543321 223468999999999987       35789999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC---C
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR---P  427 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R---P  427 (511)
                      ||||++|||++|+.||........   ...+..   ...   ....+.+    ....+.++.+||.+||. +|.+|   |
T Consensus       255 SlGvilyelltG~~Pf~~~~~~~~---~~~i~~---~~~---~~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~  320 (412)
T 2vd5_A          255 ALGVFAYEMFYGQTPFYADSTAET---YGKIVH---YKE---HLSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRG  320 (412)
T ss_dssp             HHHHHHHHHHHSSCTTCCSSHHHH---HHHHHT---HHH---HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTT
T ss_pred             HHhHHHHHHHhCCCCCCCCCHHHH---HHHHHh---ccc---CcCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCC
Confidence            999999999999999976432211   111100   000   0000111    11235788999999999 99998   5


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+|+++
T Consensus       321 ~~~ei~~H  328 (412)
T 2vd5_A          321 GAGDFRTH  328 (412)
T ss_dssp             THHHHHTS
T ss_pred             CHHHHhcC
Confidence            89999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=9.5e-47  Score=374.93  Aligned_cols=264  Identities=27%  Similarity=0.391  Sum_probs=213.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|.+.+.||+|+||.||+|.+....    ...++..||||++..... ...+.+.+|+.+|++++||||+++++++.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   96 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLK----GRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS   96 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGG----GCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccC----cccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe
Confidence            4578999999999999999999875321    112567999999976532 23356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRS-----------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIY  262 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiH  262 (511)
                      ..+..++|||||++|+|.+++....                       ..+++..++.++.||+.||.|||+++   |+|
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH  173 (314)
T 2ivs_A           97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVH  173 (314)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccc
Confidence            9999999999999999999997542                       23889999999999999999999998   999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH  342 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~  342 (511)
                      |||||+|||++                         .++.+||+|||+++...............||+.|+|||++.+..
T Consensus       174 ~dikp~NIli~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  228 (314)
T 2ivs_A          174 RDLAARNILVA-------------------------EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI  228 (314)
T ss_dssp             CCCSGGGEEEE-------------------------TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred             cccchheEEEc-------------------------CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence            99999999998                         47789999999998765544333333456789999999999999


Q ss_pred             CCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhccc
Q 010432          343 LTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       343 ~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~  421 (511)
                      ++.++|||||||++|||++ |..||........   .......              .....+...+..+.+|+.+||+.
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~  291 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL---FNLLKTG--------------HRMERPDNCSEEMYRLMLQCWKQ  291 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---HHHHHTT--------------CCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHhhcC--------------CcCCCCccCCHHHHHHHHHHccC
Confidence            9999999999999999999 9999976543221   1111100              01111223357889999999999


Q ss_pred             CCCCCCCHHHHHHHhcCC
Q 010432          422 DPKARPLMSEVVEALKPL  439 (511)
Q Consensus       422 dP~~RPs~~eil~~L~~l  439 (511)
                      ||.+||++.+|+++|+.+
T Consensus       292 dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          292 EPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             SGGGSCCHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999998754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2e-46  Score=379.31  Aligned_cols=251  Identities=25%  Similarity=0.324  Sum_probs=205.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCC-CCCCcceEee
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDL-VHLNLVKLIG  202 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~H~nIv~l~~  202 (511)
                      ..++|+++++||+|+||.||+|+++.         +++.||||+++...   ....+.+.+|..+|..+ +||||+++++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~   88 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKG---------TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS   88 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETT---------EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEE
Confidence            45689999999999999999999875         67899999997542   22345688999999988 8999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++.+.+..|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+|||++         
T Consensus        89 ~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~---------  155 (353)
T 2i0e_A           89 CFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLD---------  155 (353)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC---------
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEc---------
Confidence            999999999999999999999999654 36899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||++|||++|
T Consensus       156 ----------------~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G  217 (353)
T 2i0e_A          156 ----------------SEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG  217 (353)
T ss_dssp             ----------------TTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHS
T ss_pred             ----------------CCCcEEEEeCCcccccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcC
Confidence                            478899999999986433222  13346899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      +.||......   .+...+   ....            ..++...+..+.+||.+||+.||.+||+     +.+|+++
T Consensus       218 ~~Pf~~~~~~---~~~~~i---~~~~------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          218 QAPFEGEDED---ELFQSI---MEHN------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             SCSSCCSSHH---HHHHHH---HHCC------------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             CCCCCCCCHH---HHHHHH---HhCC------------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            9999754321   111111   1110            0112223578899999999999999995     4667654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4.5e-47  Score=391.02  Aligned_cols=261  Identities=23%  Similarity=0.276  Sum_probs=208.7

Q ss_pred             HHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcc
Q 010432          122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       122 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv  198 (511)
                      .++....++|+++++||+|+||+||+|+++.         +++.||||+++....   .....+.+|+.+|+.++|||||
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~---------~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv  132 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS---------TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV  132 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBC
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECC---------CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCC
Confidence            3444556899999999999999999999876         678999999965211   1123478999999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      +++++|.+++.+|||||||++|+|.+++...  .+++..+..++.||+.||+|||+++   ||||||||+||||+     
T Consensus       133 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~-----  202 (410)
T 3v8s_A          133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLD-----  202 (410)
T ss_dssp             CEEEEEECSSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-----
T ss_pred             eEEEEEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeEC-----
Confidence            9999999999999999999999999998653  5899999999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC----CCccccchhHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH----LTSRSDVYSFGV  354 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DIwSlGv  354 (511)
                                          .++.+||+|||+|+........ .....+||+.|+|||++.+..    |+.++|||||||
T Consensus       203 --------------------~~g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGv  261 (410)
T 3v8s_A          203 --------------------KSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV  261 (410)
T ss_dssp             --------------------TTSCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHH
T ss_pred             --------------------CCCCEEEeccceeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchH
Confidence                                4788999999999876543321 233578999999999998665    889999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHH
Q 010432          355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEV  432 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~--RPs~~ei  432 (511)
                      +||||++|+.||........   ...+..   ....   ..-+     .....+..+.+||.+||+.+|.+  ||++.||
T Consensus       262 ilyell~G~~Pf~~~~~~~~---~~~i~~---~~~~---~~~p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei  327 (410)
T 3v8s_A          262 FLYEMLVGDTPFYADSLVGT---YSKIMN---HKNS---LTFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEI  327 (410)
T ss_dssp             HHHHHHHSSCTTCCSSHHHH---HHHHHT---HHHH---CCCC-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHH
T ss_pred             HHHHHHhCCCCCCCCChhhH---HHHHHh---cccc---ccCC-----CcccccHHHHHHHHHHccChhhhCCCCCHHHH
Confidence            99999999999976432211   111100   0000   0000     00112477899999999999988  9999999


Q ss_pred             HHHh
Q 010432          433 VEAL  436 (511)
Q Consensus       433 l~~L  436 (511)
                      +++-
T Consensus       328 ~~Hp  331 (410)
T 3v8s_A          328 KRHL  331 (410)
T ss_dssp             HTSG
T ss_pred             hcCc
Confidence            9864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.4e-46  Score=383.53  Aligned_cols=251  Identities=25%  Similarity=0.322  Sum_probs=200.4

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEE
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~l  212 (511)
                      ..++||+|+||.||+|++..         +|..||||+++.......+.+.+|+.+|++|+|||||++++++...+..+|
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~---------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  163 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETA---------TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVL  163 (373)
T ss_dssp             EEEECC-----CEEEEEETT---------TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEecCcCEEEEEEEEcC---------CCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            35679999999999999875         678999999987665556779999999999999999999999999999999


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||+...                 
T Consensus       164 v~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~-----------------  223 (373)
T 2x4f_A          164 VMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNR-----------------  223 (373)
T ss_dssp             EEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEET-----------------
T ss_pred             EEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecC-----------------
Confidence            99999999999999776667999999999999999999999998   9999999999999521                 


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  372 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~  372 (511)
                            .++.+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus       224 ------~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  294 (373)
T 2x4f_A          224 ------DAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA  294 (373)
T ss_dssp             ------TTTEEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             ------CCCcEEEEeCCCceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                  356799999999987654332   22357999999999999899999999999999999999999999764321


Q ss_pred             CchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .  .+.....    ....   .     ........+..+.+||.+||+.||.+||++.+++++
T Consensus       295 ~--~~~~i~~----~~~~---~-----~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          295 E--TLNNILA----CRWD---L-----EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             H--HHHHHHH----TCCC---S-----CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             H--HHHHHHh----ccCC---C-----ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1  1111111    0000   0     000001224678999999999999999999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.1e-46  Score=375.09  Aligned_cols=253  Identities=23%  Similarity=0.384  Sum_probs=197.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|+++.         +|+.||||+++..... ..+.+.+|+.+|++++|||||+++++|.
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   74 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKV---------DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWL   74 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETT---------TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEE
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcC---------CCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            34679999999999999999999875         6789999999765432 3467899999999999999999999986


Q ss_pred             eCC---------------------------------------------------------eEEEEEEccCCCCHHHHHhh
Q 010432          206 EDD---------------------------------------------------------QRLLVYEFMPRGSLENHLFR  228 (511)
Q Consensus       206 ~~~---------------------------------------------------------~~~lv~E~~~~g~L~~~l~~  228 (511)
                      +..                                                         ..++|||||++|+|.+++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  154 (332)
T 3qd2_B           75 ETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR  154 (332)
T ss_dssp             ECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHT
T ss_pred             EeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc
Confidence            643                                                         37999999999999999975


Q ss_pred             CC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeee
Q 010432          229 RS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS  306 (511)
Q Consensus       229 ~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  306 (511)
                      ..  ...++..++.++.||+.||+|||+++   |+||||||+|||++                         .++.+||+
T Consensus       155 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~-------------------------~~~~~kL~  206 (332)
T 3qd2_B          155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFT-------------------------MDDVVKVG  206 (332)
T ss_dssp             CCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC-------------------------TTCCEEEC
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEe-------------------------CCCCEEEe
Confidence            43  23566678999999999999999998   99999999999998                         47789999


Q ss_pred             cCCCcccCCCCCcc----------eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchh
Q 010432          307 DFGLAKDGPEGDKT----------HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN  376 (511)
Q Consensus       307 DFGla~~~~~~~~~----------~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~  376 (511)
                      |||+++........          .......||+.|+|||++.+..++.++|||||||++|||++|..|+...     ..
T Consensus       207 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~  281 (332)
T 3qd2_B          207 DFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VR  281 (332)
T ss_dssp             CCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HH
T ss_pred             ecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HH
Confidence            99999876553211          1123357999999999999999999999999999999999987664210     00


Q ss_pred             HHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......             ... ........++.+.+||.+||+.||.+||++.+++++
T Consensus       282 ~~~~~~-------------~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          282 IITDVR-------------NLK-FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHH-------------TTC-CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHhh-------------ccC-CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            000000             000 001112334677899999999999999999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-46  Score=373.19  Aligned_cols=247  Identities=26%  Similarity=0.265  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      .++|++.++||+|+||+||+|++..         +++.||||++......  ....+..|+..+.++ +|+|||+++++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~  126 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKE---------DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW  126 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT---------TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECC---------CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence            4679999999999999999999875         5789999998764332  223456666666555 999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+++..+|||||| +++|.+++......+++..++.|+.||+.||+|||+++   ||||||||+|||++           
T Consensus       127 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~-----------  191 (311)
T 3p1a_A          127 EEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLG-----------  191 (311)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-----------
T ss_pred             EeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEC-----------
Confidence            9999999999999 77999999877778999999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.......   .....||+.|+|||++.+ .++.++|||||||++|||++|..
T Consensus       192 --------------~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~  253 (311)
T 3p1a_A          192 --------------PRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNME  253 (311)
T ss_dssp             --------------GGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCC
T ss_pred             --------------CCCCEEEccceeeeecccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCC
Confidence                          477899999999987654322   234569999999998875 79999999999999999999977


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||....     ..... .             .......+....+..+.+||.+||+.||.+|||+.+++++
T Consensus       254 ~~~~~~-----~~~~~-~-------------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          254 LPHGGE-----GWQQL-R-------------QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             CCSSHH-----HHHHH-T-------------TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCCCcc-----HHHHH-h-------------ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            764321     11000 0             0000001111224778999999999999999999999974

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.8e-46  Score=369.05  Aligned_cols=263  Identities=25%  Similarity=0.341  Sum_probs=200.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||.||+|++.          +++.||||++......  ....+.+|+.+|++++||||+++++++..
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   71 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN----------YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT   71 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET----------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcC----------CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc
Confidence            47899999999999999999873          4779999999765322  23678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+. ++|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++             
T Consensus        72 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~-------------  134 (288)
T 1ob3_A           72 KKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLIN-------------  134 (288)
T ss_dssp             SSCEEEEEECCS-EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-------------
T ss_pred             CCeEEEEEEecC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEc-------------
Confidence            999999999996 4999999776678999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+++.......  ......||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus       135 ------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  200 (288)
T 1ob3_A          135 ------------REGELKIADFGLARAFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL  200 (288)
T ss_dssp             ------------TTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCCEEEeECccccccCcccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                        477899999999986543221  1233578999999999876 4689999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhcc-----cccccc--ccCCcc-------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGE-----RRRFYR--LIDPRL-------EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~-------~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |........  +..... ....     ......  ..++.+       ...+....+..+.+||.+||+.||.+|||+.+
T Consensus       201 f~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  277 (288)
T 1ob3_A          201 FPGVSEADQ--LMRIFR-ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ  277 (288)
T ss_dssp             CCCSSHHHH--HHHHHH-HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCHHHH--HHHHHH-HHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHH
Confidence            976432211  111110 0000     000000  000000       00111223577899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++++
T Consensus       278 ~l~h  281 (288)
T 1ob3_A          278 ALEH  281 (288)
T ss_dssp             HHTS
T ss_pred             HhcC
Confidence            9874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-46  Score=379.79  Aligned_cols=267  Identities=25%  Similarity=0.378  Sum_probs=212.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++....    ...++..||||++..... ...+.+.+|+.+|.++ +||||+++++++
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGIS----KTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCS----SSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccc----cCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            4578999999999999999999974311    123577899999975432 2346789999999999 999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSL----------------------PLPWSIRMKIALGAAKGLAFLHEEAERPVIY  262 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiH  262 (511)
                      ...+..+||||||++|+|.+++.....                      .+++..++.++.||+.||.|||+++   |+|
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH  195 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVH  195 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence            999999999999999999999975432                      3789999999999999999999998   999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH  342 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~  342 (511)
                      |||||+|||++                         .++.+||+|||+++...............||+.|+|||++.+..
T Consensus       196 ~Dikp~NIll~-------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  250 (344)
T 1rjb_A          196 RDLAARNVLVT-------------------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  250 (344)
T ss_dssp             TTCSGGGEEEE-------------------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             CCCChhhEEEc-------------------------CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCC
Confidence            99999999998                         47789999999998765544333344467889999999999999


Q ss_pred             CCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhccc
Q 010432          343 LTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       343 ~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~  421 (511)
                      ++.++|||||||++|||++ |..||.......  .+......              ......+...+..+.+||.+||+.
T Consensus       251 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~  314 (344)
T 1rjb_A          251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--NFYKLIQN--------------GFKMDQPFYATEEIYIIMQSCWAF  314 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CChhHhHHHHHHHHHHHHcCCCCCcccCCcHH--HHHHHHhc--------------CCCCCCCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999998 999997654321  11111111              011111222357899999999999


Q ss_pred             CCCCCCCHHHHHHHhcCCCC
Q 010432          422 DPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       422 dP~~RPs~~eil~~L~~l~~  441 (511)
                      ||.+||++.+|+++|+.+..
T Consensus       315 dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          315 DSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             SGGGSCCHHHHHHHHHHHC-
T ss_pred             CchhCcCHHHHHHHHHHHHH
Confidence            99999999999999986543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=8.7e-46  Score=365.23  Aligned_cols=268  Identities=17%  Similarity=0.157  Sum_probs=213.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++......  ..+.+|+.++..+ +|+||+++++++..
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~   77 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLL---------NNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQE   77 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETT---------TTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECC---------CCcEEEEEEeccCCcc--HHHHHHHHHHHHHhcCCCCCeEEeecCC
Confidence            4679999999999999999999865         6789999999754322  3578899999999 89999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....++||||+ +++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++..+..        
T Consensus        78 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~--------  145 (298)
T 1csn_A           78 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSK--------  145 (298)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSST--------
T ss_pred             CceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCC--------
Confidence            99999999999 99999999876667999999999999999999999998   9999999999999842210        


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                  ....+||+|||+++........     .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       146 ------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  213 (298)
T 1csn_A          146 ------------NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR  213 (298)
T ss_dssp             ------------TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHc
Confidence                        2345999999999876543221     11234679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |+.||..................... .....     +..    ..+..+.+|+.+||+.||.+||++.+|++.|+.+.
T Consensus       214 g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          214 GSLPWQGLKAATNKQKYERIGEKKQS-TPLRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             SSCTTSSCCSCCHHHHHHHHHHHHHH-SCHHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCCCcchhhccccHHHHHHHHhhccC-ccHHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence            99999875543332222211111000 00000     011    12467899999999999999999999999998664

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-46  Score=378.55  Aligned_cols=249  Identities=24%  Similarity=0.305  Sum_probs=204.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|.+.+.||+|+||.||+|++..         +++.||||++....   ......+.+|+.+|+.++||||+++++++
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~   78 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYK---------TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI   78 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3689999999999999999999865         67899999996432   12235688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++||||+ +|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        79 ~~~~~~~lv~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~-----------  142 (336)
T 3h4j_B           79 TTPTDIVMVIEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLD-----------  142 (336)
T ss_dssp             ECSSEEEEEECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEEC-----------
T ss_pred             EeCCEEEEEEECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEc-----------
Confidence            9999999999999 78999988654 46999999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~  363 (511)
                                    +++.+||+|||++........   ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+
T Consensus       143 --------------~~~~~kl~DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  205 (336)
T 3h4j_B          143 --------------DNLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR  205 (336)
T ss_dssp             --------------TTCCEEECCSSCTBTTTTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------CCCCEEEEEeccceeccCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCC
Confidence                          477899999999987654332   234579999999999988776 68999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .||.........                 ..+... ...++...+..+.+||.+||+.||.+|||+.+|+++-
T Consensus       206 ~Pf~~~~~~~~~-----------------~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  260 (336)
T 3h4j_B          206 LPFDDEFIPNLF-----------------KKVNSC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP  260 (336)
T ss_dssp             CSSBCSSSTTCB-----------------CCCCSS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred             CCCCCccHHHHH-----------------HHHHcC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence            999754322110                 000000 0111222357789999999999999999999998753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.4e-46  Score=375.18  Aligned_cols=263  Identities=23%  Similarity=0.359  Sum_probs=204.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|+++++||+|+||.||+|++...+..     ....||+|.+.... ......+.+|+.+|++++||||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCS-----CCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCce-----EEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence            36799999999999999999998763321     12357888886543 3345778999999999999999999999987


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +. .++||||+.+|+|.+++......+++..++.|+.||+.||.|||+++   |+||||||+|||++             
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~-------------  151 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVK-------------  151 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE-------------
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEc-------------
Confidence            65 78999999999999999877778999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       152 ------------~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p  219 (327)
T 3lzb_A          152 ------------TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ------------ETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------CCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCC
Confidence                        367899999999987655433333344567889999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |........   ......              ......+...+..+.+||.+||+.||.+||++.+|++.|+.+..
T Consensus       220 ~~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          220 YDGIPASEI---SSILEK--------------GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             TTTCCGGGH---HHHHHT--------------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCCCHHHH---HHHHHc--------------CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            976543221   111110              00111122235678999999999999999999999999987643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.1e-46  Score=370.16  Aligned_cols=270  Identities=24%  Similarity=0.341  Sum_probs=208.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|.+.+.||+|+||.||+|++...+...  ...+..||+|++........+.+.+|+.+|++++||||+++++++..+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~--~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYG--QLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGG--CEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccc--cccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            467899999999999999999987532100  001257999999776555667899999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++|||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++.......+      
T Consensus        85 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~------  155 (289)
T 4fvq_A           85 DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTG------  155 (289)
T ss_dssp             TCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGT------
T ss_pred             CCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCccccc------
Confidence            9999999999999999999876656999999999999999999999998   9999999999999853321111      


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 +...+||+|||++......      ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+
T Consensus       156 -----------~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~  218 (289)
T 4fvq_A          156 -----------NPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP  218 (289)
T ss_dssp             -----------BCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             -----------ccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                       1234999999999765432      23468999999999987 77999999999999999999965555


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLK  443 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~~  443 (511)
                      ......  .......    .....        +..    ..+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus       219 ~~~~~~--~~~~~~~----~~~~~--------~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          219 LSALDS--QRKLQFY----EDRHQ--------LPA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             TTTSCH--HHHHHHH----HTTCC--------CCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             ccccch--HHHHHHh----hccCC--------CCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            432211  1111100    00000        011    11345789999999999999999999999999886543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=378.48  Aligned_cols=253  Identities=24%  Similarity=0.347  Sum_probs=197.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCC--CCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVH--LNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H--~nIv~l~~~  203 (511)
                      .++|++++.||+|+||.||+|.+.          ++..||||++......  ..+.+.+|+.+|.+++|  +||++++++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   77 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNE----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   77 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECT----------TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeC----------CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeee
Confidence            467999999999999999999864          4678999999765433  23568899999999976  999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +..++..+||||+ .+|+|.+++... ..+++..+..|+.||+.||.|||+++   |+||||||+|||++          
T Consensus        78 ~~~~~~~~lv~e~-~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~----------  142 (343)
T 3dbq_A           78 EITDQYIYMVMEC-GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV----------  142 (343)
T ss_dssp             EECSSEEEEEECC-CSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE----------
T ss_pred             EeeCCEEEEEEeC-CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE----------
Confidence            9999999999995 588999999764 47899999999999999999999998   99999999999996          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----------CCCCccccchhH
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----------GHLTSRSDVYSF  352 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DIwSl  352 (511)
                                      ++.+||+|||+++..............+||+.|+|||++.+           ..++.++|||||
T Consensus       143 ----------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diwsl  206 (343)
T 3dbq_A          143 ----------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL  206 (343)
T ss_dssp             ----------------TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHH
T ss_pred             ----------------CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHH
Confidence                            55699999999987755443333445689999999999865           678999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ||++|||++|+.||......     ....          ...+++.....++...+..+.+||.+||+.||.+|||+.++
T Consensus       207 G~il~ell~g~~pf~~~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~  271 (343)
T 3dbq_A          207 GCILYYMTYGKTPFQQIINQ-----ISKL----------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL  271 (343)
T ss_dssp             HHHHHHHHHSSCTTTTCCSH-----HHHH----------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHHHHhCCCcchhhhhH-----HHHH----------HHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            99999999999999753221     0000          11111111222222234678999999999999999999999


Q ss_pred             HHHh
Q 010432          433 VEAL  436 (511)
Q Consensus       433 l~~L  436 (511)
                      +++.
T Consensus       272 l~hp  275 (343)
T 3dbq_A          272 LAHP  275 (343)
T ss_dssp             HTSH
T ss_pred             HhCc
Confidence            9864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.4e-46  Score=364.27  Aligned_cols=262  Identities=29%  Similarity=0.467  Sum_probs=197.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .++|++.+.||+|+||.||+|++           ++..||||+++.....    ..+.+.+|+.+++.++||||++++++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   74 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-----------IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV   74 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-----------TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-----------cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            35789999999999999999987           3668999999764322    23568899999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +..++..++||||+++++|.+++..  ..+++..++.++.||+.||.|||+++..+|+||||||+|||++.....     
T Consensus        75 ~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~-----  147 (271)
T 3dtc_A           75 CLKEPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN-----  147 (271)
T ss_dssp             ECCC--CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS-----
T ss_pred             EecCCceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc-----
Confidence            9999999999999999999999853  478999999999999999999999875558999999999999842110     


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                  ....++.+||+|||+++......    .....||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       148 ------------~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~  211 (271)
T 3dtc_A          148 ------------GDLSNKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE  211 (271)
T ss_dssp             ------------SCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred             ------------ccccCcceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence                        00025679999999998654432    22357999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .||.......   ....             ..........+...+..+.+|+.+||+.||.+|||+.+++++|+.+
T Consensus       212 ~p~~~~~~~~---~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          212 VPFRGIDGLA---VAYG-------------VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CTTTTSCHHH---HHHH-------------HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCCCCHHH---HHHh-------------hhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            9997543211   0000             0000111112223357899999999999999999999999999754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.2e-46  Score=376.16  Aligned_cols=264  Identities=24%  Similarity=0.385  Sum_probs=193.4

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ...++|++.+.||+|+||.||+|++...+.      ....||||+++....  ...+.+.+|+.++++++||||++++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   93 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDG------SFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGV   93 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCC------cceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhce
Confidence            345789999999999999999998765221      224899999976532  334678999999999999999999999


Q ss_pred             EEeCCeE------EEEEEccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          204 CIEDDQR------LLVYEFMPRGSLENHLFRR-----SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       204 ~~~~~~~------~lv~E~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      +......      ++||||+++|+|.+++...     ...+++..++.++.||+.||.|||+++   |+||||||+|||+
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli  170 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCML  170 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEE
Confidence            9877655      9999999999999998632     225899999999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +                         +++.+||+|||+++...............||+.|+|||++.+..++.++|||||
T Consensus       171 ~-------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  225 (323)
T 3qup_A          171 A-------------------------EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF  225 (323)
T ss_dssp             C-------------------------TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             c-------------------------CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhH
Confidence            8                         477899999999987655443333344567889999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          353 GVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       353 Gvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||++|||++ |..||........   .......              .....+...+..+.+|+.+||+.||.+|||+.+
T Consensus       226 G~il~ell~~g~~p~~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  288 (323)
T 3qup_A          226 GVTMWEIMTRGQTPYAGIENAEI---YNYLIGG--------------NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTC  288 (323)
T ss_dssp             HHHHHHHHTTSCCTTTTCCGGGH---HHHHHTT--------------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             HHHHHHHHhCCCCCccccChHHH---HHHHhcC--------------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHH
Confidence            999999999 9999976543211   1111000              001112223567899999999999999999999


Q ss_pred             HHHHhcCCC
Q 010432          432 VVEALKPLP  440 (511)
Q Consensus       432 il~~L~~l~  440 (511)
                      +++.|+.+.
T Consensus       289 l~~~l~~~l  297 (323)
T 3qup_A          289 LRMELENIL  297 (323)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.1e-46  Score=383.40  Aligned_cols=252  Identities=24%  Similarity=0.352  Sum_probs=197.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCC--CCCcceEeeEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLV--HLNLVKLIGYC  204 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~--H~nIv~l~~~~  204 (511)
                      .+|++++.||+|+||.||+|.+.          .++.||||++......  ....+.+|+.+|.+|.  |+|||++++++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~  125 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNE----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE  125 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT----------TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcC----------CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE
Confidence            56999999999999999999864          3678999999765432  3356889999999996  59999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..++.+||||| +.+++|.+++.... .+++..++.|+.||+.||.|||+++   ||||||||+||||+           
T Consensus       126 ~~~~~~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-----------  189 (390)
T 2zmd_A          126 ITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-----------  189 (390)
T ss_dssp             ECSSEEEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-----------
T ss_pred             ecCCEEEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-----------
Confidence            99999999999 55889999997654 7889999999999999999999998   99999999999996           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----------CCCCccccchhHH
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----------GHLTSRSDVYSFG  353 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DIwSlG  353 (511)
                                     ++.+||+|||+++..............+||+.|+|||++.+           ..|+.++||||||
T Consensus       190 ---------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlG  254 (390)
T 2zmd_A          190 ---------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  254 (390)
T ss_dssp             ---------------SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHH
T ss_pred             ---------------CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHH
Confidence                           46799999999987654433323345689999999999865           4689999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      ||||||++|+.||......     .....          .++++.....++...+..+.+||.+||+.||.+||++.+|+
T Consensus       255 vil~ell~G~~Pf~~~~~~-----~~~~~----------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell  319 (390)
T 2zmd_A          255 CILYYMTYGKTPFQQIINQ-----ISKLH----------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL  319 (390)
T ss_dssp             HHHHHHHHSSCTTTTCCCH-----HHHHH----------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHHHCCCcchhhhHH-----HHHHH----------HHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHh
Confidence            9999999999999753221     00111          11111111112222246789999999999999999999999


Q ss_pred             HHh
Q 010432          434 EAL  436 (511)
Q Consensus       434 ~~L  436 (511)
                      ++.
T Consensus       320 ~hp  322 (390)
T 2zmd_A          320 AHP  322 (390)
T ss_dssp             TSH
T ss_pred             hCc
Confidence            764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=3.5e-46  Score=390.18  Aligned_cols=250  Identities=27%  Similarity=0.423  Sum_probs=205.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|.+.           +..||||+++...  ..+.|.+|+.+|++++|||||++++++..
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-----------~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~  257 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-----------GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE  257 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-----------TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-----------CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc
Confidence            4568899999999999999999873           5689999998654  34679999999999999999999999887


Q ss_pred             CC-eEEEEEEccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 DD-QRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 ~~-~~~lv~E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+ ..+||||||++|+|.+++..... .+++..++.++.||+.||+|||+++   ||||||||+|||++           
T Consensus       258 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~-----------  323 (450)
T 1k9a_A          258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS-----------  323 (450)
T ss_dssp             TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC-----------
T ss_pred             CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEC-----------
Confidence            65 78999999999999999976543 4799999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                    .++.+||+|||+++......     ....+|+.|+|||++.+..++.++|||||||+||||++ |+
T Consensus       324 --------------~~~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~  384 (450)
T 1k9a_A          324 --------------EDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  384 (450)
T ss_dssp             --------------TTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             --------------CCCCEEEeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                          47789999999998653321     22367899999999999999999999999999999998 99


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .||.........   .....              ......+..++..+.+||.+||+.||.+|||+.+|++.|+.+
T Consensus       385 ~P~~~~~~~~~~---~~i~~--------------~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          385 VPYPRIPLKDVV---PRVEK--------------GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             CSSTTSCTTTHH---HHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHH---HHHHc--------------CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999765433211   11110              011112233457899999999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.2e-46  Score=369.02  Aligned_cols=256  Identities=21%  Similarity=0.362  Sum_probs=206.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|.+.          ++..||||++..... ..+.+.+|+.++.+++|+||+++++++..
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~----------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   90 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK   90 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET----------TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc----------CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEec
Confidence            3468999999999999999999875          366899999986543 34678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~-------------  154 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVN-------------  154 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEEC-------------
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEc-------------
Confidence            99999999999999999999765567999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus       155 ------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p  221 (283)
T 3gen_A          155 ------------DQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP  221 (283)
T ss_dssp             ------------TTSCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             ------------CCCCEEEccccccccccccccc-cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                        4778999999999865432211 1223457889999999998999999999999999999998 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |......   ........          ..    ....+...+..+.+|+.+||+.||.+|||+.+++++|..+
T Consensus       222 ~~~~~~~---~~~~~~~~----------~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          222 YERFTNS---ETAEHIAQ----------GL----RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             TTTSCHH---HHHHHHHT----------TC----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccChh---HHHHHHhc----------cc----CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            9754321   11111110          00    0111112246789999999999999999999999998754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.1e-46  Score=368.14  Aligned_cols=261  Identities=26%  Similarity=0.379  Sum_probs=200.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhC--CCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||+||+|++           +++.||||++...   ....+.+|.+++..  ++||||+++++++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~   72 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-----------QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDM   72 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-----------TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-----------CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeec
Confidence            46899999999999999999987           4678999999654   23456667777665  89999999999876


Q ss_pred             eC----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecccCCCcEEec
Q 010432          206 ED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH--------EEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       206 ~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH--------~~~~~~iiHrDLKp~NILl~  273 (511)
                      ..    ...++||||+++|+|.+++..  ..+++..++.++.||+.||+|||        +++   |+||||||+|||++
T Consensus        73 ~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~  147 (301)
T 3q4u_A           73 TSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVK  147 (301)
T ss_dssp             EEETTEEEEEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEEC
T ss_pred             cccCCCceeEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEc
Confidence            52    458899999999999999943  46899999999999999999999        777   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccC------CCCc
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG------HLTS  345 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~------~~~~  345 (511)
                                               .++.+||+|||+++.........  ......||+.|+|||++.+.      .++.
T Consensus       148 -------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (301)
T 3q4u_A          148 -------------------------KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK  202 (301)
T ss_dssp             -------------------------TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHH
T ss_pred             -------------------------CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCc
Confidence                                     47789999999997654432221  12234799999999999876      5667


Q ss_pred             cccchhHHHHHHHHHhC----------CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccC-CCCCHHHHHHHHHH
Q 010432          346 RSDVYSFGVVLLEMLTG----------RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE-GHFSIKGAQKAAQL  414 (511)
Q Consensus       346 ~~DIwSlGvil~elltg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L  414 (511)
                      ++|||||||++|||++|          ..||............ ... ....     ....+.+. ..+....+..+.+|
T Consensus       203 ~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~-~~~-~~~~-----~~~~~~~~~~~~~~~~~~~l~~l  275 (301)
T 3q4u_A          203 RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED-MRK-VVCV-----DQQRPNIPNRWFSDPTLTSLAKL  275 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH-HHH-HHTT-----SCCCCCCCGGGGGSHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhh-hhH-HHhc-----cCCCCCCChhhccCccHHHHHHH
Confidence            99999999999999999          8888654333221110 000 0000     00011111 11233567889999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          415 AAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.+||+.||.+|||+.+|++.|+.+
T Consensus       276 i~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          276 MKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhhcChhhCCCHHHHHHHHhcc
Confidence            9999999999999999999998754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.6e-46  Score=382.73  Aligned_cols=257  Identities=26%  Similarity=0.328  Sum_probs=199.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHH-HhCCCCCCcceEeeEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNF-LGDLVHLNLVKLIGYC  204 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~i-l~~l~H~nIv~l~~~~  204 (511)
                      ++|+++++||+|+||.||+|+++.         +++.||||+++.....   ....+.+|..+ ++.++|||||++++++
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~---------~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~  108 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKA---------EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF  108 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETT---------TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcC---------CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence            579999999999999999999876         6789999999765432   23456778777 5778999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+.+|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+||||+           
T Consensus       109 ~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~-----------  173 (373)
T 2r5t_A          109 QTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLD-----------  173 (373)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC-----------
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEC-----------
Confidence            9999999999999999999999654 46889999999999999999999999   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||++|||++|..
T Consensus       174 --------------~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~  237 (373)
T 2r5t_A          174 --------------SQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP  237 (373)
T ss_dssp             --------------TTSCEEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCC
Confidence                          478899999999986433221  1344689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLK  443 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~~  443 (511)
                      ||......   .+...   ......        .    ++...+..+.+||.+||+.||.+||++.+.++.+...+.+.
T Consensus       238 Pf~~~~~~---~~~~~---i~~~~~--------~----~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~  298 (373)
T 2r5t_A          238 PFYSRNTA---EMYDN---ILNKPL--------Q----LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFS  298 (373)
T ss_dssp             TTCCSBHH---HHHHH---HHHSCC--------C----CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGT
T ss_pred             CCCCCCHH---HHHHH---HHhccc--------C----CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcccc
Confidence            99754321   11111   111100        1    11123467899999999999999999865555554444443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2e-46  Score=380.51  Aligned_cols=299  Identities=22%  Similarity=0.216  Sum_probs=213.0

Q ss_pred             cccChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC---
Q 010432          117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV---  193 (511)
Q Consensus       117 ~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---  193 (511)
                      ..+++.+.....++|+++++||+|+||+||+|++..         +++.||||+++... .....+..|+.+++.+.   
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~   92 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHID---------NKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDD   92 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCS
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECC---------CCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccC
Confidence            345666666677899999999999999999999875         67799999997532 22355778999999986   


Q ss_pred             --CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          194 --HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       194 --H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                        |||||++++++...+..+|||||+ +++|.+++.... ..+++..++.++.||+.||+|||+++   ||||||||+||
T Consensus        93 ~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NI  168 (360)
T 3llt_A           93 INNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENI  168 (360)
T ss_dssp             TTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGE
T ss_pred             CCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccE
Confidence              999999999999999999999999 999999997653 45899999999999999999999998   99999999999


Q ss_pred             EeccccccccCCcceeeec-cccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          271 LLDAVRAENYGKFGFCIYY-GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||+........ ....... +.........+..+||+|||+++......     ....||+.|+|||++.+..++.++||
T Consensus       169 ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di  242 (360)
T 3llt_A          169 LLDDPYFEKSL-ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDM  242 (360)
T ss_dssp             EESCTTCCEEE-EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHH
T ss_pred             EEccccccccc-cchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccch
Confidence            99742100000 0000000 00000000136789999999998754422     33579999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccc-------cccccc-CC----ccCCCCC-------------
Q 010432          350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERR-------RFYRLI-DP----RLEGHFS-------------  404 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~----~~~~~~~-------------  404 (511)
                      |||||++|||++|+.||...........+...........       ...... ..    .......             
T Consensus       243 wslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  322 (360)
T 3llt_A          243 WSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP  322 (360)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc
Confidence            9999999999999999976543221111111110000000       000000 00    0000000             


Q ss_pred             ---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          405 ---IKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       405 ---~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                         ....+.+.+||.+||+.||.+|||+.|++++
T Consensus       323 ~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          323 LYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence               0012567899999999999999999999864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=8.6e-46  Score=381.26  Aligned_cols=256  Identities=21%  Similarity=0.260  Sum_probs=196.0

Q ss_pred             hcCCCCC-CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHh-CCCCCCcceEeeEEE
Q 010432          128 TRNFRPE-SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG-DLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~-~l~H~nIv~l~~~~~  205 (511)
                      .++|.+. ++||+|+||+||+|++..         +++.||||++...     ..+.+|+.++. .++||||+++++++.
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~---------~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~  125 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKR---------TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYE  125 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECC---------CCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEe
Confidence            3567776 689999999999999876         6789999999643     46778998874 458999999999987


Q ss_pred             e----CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 E----DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .    ...+|||||||++|+|.+++.... ..+++..+..|+.||+.||.|||+++   ||||||||+|||++...    
T Consensus       126 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~----  198 (400)
T 1nxk_A          126 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKR----  198 (400)
T ss_dssp             EEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSS----
T ss_pred             ecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCC----
Confidence            6    567899999999999999997643 46999999999999999999999998   99999999999998421    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .++.+||+|||+++.......   ....+||+.|+|||++.+..|+.++||||||||||||+
T Consensus       199 ------------------~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  257 (400)
T 1nxk_A          199 ------------------PNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  257 (400)
T ss_dssp             ------------------TTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred             ------------------CCccEEEEecccccccCCCCc---cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence                              267899999999987543221   33467999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchh-HHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +|+.||.......... .......   ..   ..     +........+..+.+||.+||+.||.+|||+.+|+++-
T Consensus       258 ~g~~pf~~~~~~~~~~~~~~~i~~---~~---~~-----~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  323 (400)
T 1nxk_A          258 CGYPPFYSNHGLAISPGMKTRIRM---GQ---YE-----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  323 (400)
T ss_dssp             HSSCSCCCCTTCSSCCSHHHHHHH---TC---CC-----CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             hCCCCCCCCccccccHHHHHHHHc---Cc---cc-----CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            9999997654332110 1111110   00   00     00001112357789999999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=6.4e-46  Score=365.22  Aligned_cols=261  Identities=27%  Similarity=0.471  Sum_probs=196.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.++||+|+||.||+|++..            .||||+++.....  ..+.+.+|+.+|++++||||+++++++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~------------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWHG------------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS   89 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESSS------------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEcC------------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence            45689999999999999999998643            6999999765432  235688999999999999999999965


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                       .....++|||||++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        90 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~-----------  154 (289)
T 3og7_A           90 -TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLH-----------  154 (289)
T ss_dssp             -CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE-----------
T ss_pred             -cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEEC-----------
Confidence             556789999999999999999777778999999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHh
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~ellt  361 (511)
                                    .++.+||+|||+++...............||+.|+|||++.   +..++.++|||||||++|||++
T Consensus       155 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  220 (289)
T 3og7_A          155 --------------EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT  220 (289)
T ss_dssp             --------------TTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH
Confidence                          47789999999998654432222334467999999999986   6678999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |+.||.......  .+.......         ...+. .......++..+.+||.+||+.||.+||++.+|++.|+.+.
T Consensus       221 g~~p~~~~~~~~--~~~~~~~~~---------~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          221 GQLPYSNINNRD--QIIEMVGRG---------SLSPD-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             SSCTTSSCCCHH--HHHHHHHHT---------SCCCC-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCccccchHH--HHHHHhccc---------ccCcc-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            999997643221  111111110         00000 01112233578999999999999999999999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.1e-46  Score=372.36  Aligned_cols=265  Identities=26%  Similarity=0.392  Sum_probs=214.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++...    ....++..||||+++.... ...+.+.+|+.+|.++ +||||+++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   96 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGL----IKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESS----SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeec----cccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence            456899999999999999999986431    1123678999999986543 2345688999999999 999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSL-----------------PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT  267 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp  267 (511)
                      ..++..++|||||++|+|.+++.....                 .+++..++.++.||+.||.|||+++   |+||||||
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp  173 (313)
T 1t46_A           97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA  173 (313)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCcc
Confidence            999999999999999999999975432                 4899999999999999999999998   99999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccc
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS  347 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~  347 (511)
                      +|||++                         .++.+||+|||+++...............||+.|+|||++.+..++.++
T Consensus       174 ~Nil~~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  228 (313)
T 1t46_A          174 RNILLT-------------------------HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES  228 (313)
T ss_dssp             GGEEEE-------------------------TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHH
T ss_pred             ceEEEc-------------------------CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHH
Confidence            999998                         4778999999999987665444334445688999999999999999999


Q ss_pred             cchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          348 DVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       348 DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      |||||||++|||++ |+.||........  ........          .    ....+...+..+.+|+.+||+.||.+|
T Consensus       229 Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~~~~----------~----~~~~~~~~~~~l~~li~~~l~~dp~~R  292 (313)
T 1t46_A          229 DVWSYGIFLWELFSLGSSPYPGMPVDSK--FYKMIKEG----------F----RMLSPEHAPAEMYDIMKTCWDADPLKR  292 (313)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCSSHH--HHHHHHHT----------C----CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcccchhH--HHHHhccC----------C----CCCCcccCCHHHHHHHHHHcCCCchhC
Confidence            99999999999999 9999976543211  11111100          0    011112235778999999999999999


Q ss_pred             CCHHHHHHHhcCC
Q 010432          427 PLMSEVVEALKPL  439 (511)
Q Consensus       427 Ps~~eil~~L~~l  439 (511)
                      ||+.+|+++|+.+
T Consensus       293 ps~~ell~~L~~~  305 (313)
T 1t46_A          293 PTFKQIVQLIEKQ  305 (313)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHH
Confidence            9999999999754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2.6e-46  Score=390.83  Aligned_cols=250  Identities=29%  Similarity=0.366  Sum_probs=197.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|+++++||+|+||.||+|++..         +|+.||||++....   ......+.+|+.+|+.++||||+++++++
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~  217 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKA---------TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF  217 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcC---------CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE
Confidence            4679999999999999999999876         68899999997532   22234678899999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      ...+.++||||||++|+|.+++... ..+++..+..++.||+.||+|||+ ++   ||||||||+||||+          
T Consensus       218 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~----------  283 (446)
T 4ejn_A          218 QTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLD----------  283 (446)
T ss_dssp             EETTEEEEEECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEEC----------
T ss_pred             eeCCEEEEEEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEEC----------
Confidence            9999999999999999999998654 478999999999999999999998 88   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                     .++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++|||||||+||||++|+
T Consensus       284 ---------------~~~~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  346 (446)
T 4ejn_A          284 ---------------KDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR  346 (446)
T ss_dssp             ---------------SSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCCCEEEccCCCceeccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCC
Confidence                           477899999999986443222  234468999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      .||......   .+....   .....            .++...+..+.+||.+||+.||.+||     ++.+++++
T Consensus       347 ~Pf~~~~~~---~~~~~i---~~~~~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          347 LPFYNQDHE---KLFELI---LMEEI------------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             CSSCCSSHH---HHHHHH---HHCCC------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCCCCHH---HHHHHH---HhCCC------------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            999754321   111111   11100            11122357789999999999999999     99999874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5.5e-46  Score=389.72  Aligned_cols=268  Identities=22%  Similarity=0.302  Sum_probs=186.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|+++++||+|+||+||+|++..         +++.||||++.....  ...+.+.+|+.+|++|+|||||++++++..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  123 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKL---------EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIP  123 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC-----------CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECC---------CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEec
Confidence            689999999999999999999876         678999999975432  233568899999999999999999999854


Q ss_pred             C-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 D-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .     ..+||||||+ +|+|.+++.. ...+++..+..|+.||+.||.|||+++   ||||||||+||||+        
T Consensus       124 ~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~--------  190 (458)
T 3rp9_A          124 KDVEKFDELYVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVN--------  190 (458)
T ss_dssp             SCTTTCCCEEEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC--------
T ss_pred             CCcccCceEEEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEEC--------
Confidence            3     5689999998 6799998854 457999999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc-------------------------eeeeeccccccccCCc
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-------------------------HVSTRVMGTYGYAAPE  336 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-------------------------~~~~~~~Gt~~y~aPE  336 (511)
                                       .++.+||+|||+|+........                         ...+..+||+.|+|||
T Consensus       191 -----------------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  253 (458)
T 3rp9_A          191 -----------------QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE  253 (458)
T ss_dssp             -----------------TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHH
T ss_pred             -----------------CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChH
Confidence                             4778999999999876432110                         1234468999999999


Q ss_pred             ccc-cCCCCccccchhHHHHHHHHHh-----------CCCCCCCCCCCCc-----------------hhHHHhhhhhhcc
Q 010432          337 YVM-TGHLTSRSDVYSFGVVLLEMLT-----------GRRSMDKNRPNGE-----------------HNLVEWARPHLGE  387 (511)
Q Consensus       337 ~~~-~~~~~~~~DIwSlGvil~ellt-----------g~~pf~~~~~~~~-----------------~~~~~~~~~~~~~  387 (511)
                      ++. +..|+.++||||||||||||++           |+++|.+......                 ......+...++.
T Consensus       254 ~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~  333 (458)
T 3rp9_A          254 LILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGT  333 (458)
T ss_dssp             HHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCC
T ss_pred             HhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCC
Confidence            864 6679999999999999999999           6666655331100                 0000000000000


Q ss_pred             c-------------cccccccCCccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          388 R-------------RRFYRLIDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       388 ~-------------~~~~~~~~~~~~---~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .             ..+.........   .......+..+.+||.+||+.||.+|||+.|++++
T Consensus       334 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          334 PSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             CCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            0             000000000000   00011235788999999999999999999999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=6.8e-46  Score=371.87  Aligned_cols=253  Identities=27%  Similarity=0.367  Sum_probs=196.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .++|++.+.||+|+||.||+|++....      .+++.||||+++....    .....+.+|+.+|++++||||++++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGA------NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSST------TTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccC------CCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            357999999999999999999885321      2688999999986532    223457789999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +...+..|||||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++          
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~----------  155 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLN----------  155 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEEC----------
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEEC----------
Confidence            99999999999999999999999654 46889999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                     .++.+||+|||+++.......  .....+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       156 ---------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~  218 (327)
T 3a62_A          156 ---------------HQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA  218 (327)
T ss_dssp             ---------------TTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCCcEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCC
Confidence                           477899999999986433221  123467999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      .||......   ......   ....        .    .++...+..+.+||.+||+.||.+||     ++.+++++
T Consensus       219 ~pf~~~~~~---~~~~~i---~~~~--------~----~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          219 PPFTGENRK---KTIDKI---LKCK--------L----NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             CSCCCSSHH---HHHHHH---HHTC--------C----CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             CCCCCCCHH---HHHHHH---HhCC--------C----CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            999754321   111111   1000        0    11122357789999999999999999     77888875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.1e-46  Score=394.59  Aligned_cols=260  Identities=26%  Similarity=0.399  Sum_probs=210.7

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       124 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      +.+..++|++.+.||+|+||.||+|.+..          +..||||+++... ...+.|.+|+.+|++++|||||+++++
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~----------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~  251 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNK----------HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV  251 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETT----------TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECC----------ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEE
Confidence            34456789999999999999999998853          5689999998654 345789999999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +. .+..+||||||++|+|.+++... ...+++..++.++.||+.||+|||+++   ||||||||+||||+         
T Consensus       252 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~---------  318 (454)
T 1qcf_A          252 VT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS---------  318 (454)
T ss_dssp             EC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEEC---------
T ss_pred             Ee-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEC---------
Confidence            86 66789999999999999999643 236889999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-  361 (511)
                                      .++.+||+|||+++....... .......+|+.|+|||++....++.++|||||||+||||++ 
T Consensus       319 ----------------~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~  381 (454)
T 1qcf_A          319 ----------------ASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY  381 (454)
T ss_dssp             ----------------TTCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ----------------CCCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhC
Confidence                            477899999999987543211 11223457889999999998999999999999999999999 


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |+.||.+....   .+.......              .....+..++..+.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       382 g~~P~~~~~~~---~~~~~i~~~--------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          382 GRIPYPGMSNP---EVIRALERG--------------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             SCCSSTTCCHH---HHHHHHHHT--------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCCCCHH---HHHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            99999754321   111111100              0111122345789999999999999999999999999998754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=6e-46  Score=375.63  Aligned_cols=257  Identities=23%  Similarity=0.266  Sum_probs=192.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||+++...  ..+.+.+|+.+|++++||||+++++++..
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~  119 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKG---------TQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET  119 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECC---------CCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec
Confidence            34679999999999999999999875         57799999998653  23567889999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..+|||||+++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++...          
T Consensus       120 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~----------  185 (349)
T 2w4o_A          120 PTEISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPA----------  185 (349)
T ss_dssp             SSEEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSS----------
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCC----------
Confidence            99999999999999999999654 46899999999999999999999998   99999999999997321          


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       186 ------------~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  250 (349)
T 2w4o_A          186 ------------PDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF  250 (349)
T ss_dssp             ------------TTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------------CCCCEEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCC
Confidence                        36789999999998754322   123467999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .......  .+.....   ....   .     .........+..+.+||.+||+.||.+|||+.+++++-
T Consensus       251 ~~~~~~~--~~~~~i~---~~~~---~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  307 (349)
T 2w4o_A          251 YDERGDQ--FMFRRIL---NCEY---Y-----FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP  307 (349)
T ss_dssp             CCTTCHH--HHHHHHH---TTCC---C-----CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred             CCCcccH--HHHHHHH---hCCC---c-----cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            7543211  1111110   0000   0     01111122356789999999999999999999999854

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=2.3e-46  Score=367.65  Aligned_cols=261  Identities=25%  Similarity=0.392  Sum_probs=214.8

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      ++....++|++.+.||+|+||.||+|.+..         ++..||||++.... ...+.+.+|+.++++++||||+++++
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~   76 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKK---------YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLG   76 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGG---------GTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecC---------CCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            334456789999999999999999999876         57799999997653 33467899999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ++...+..++||||+++++|.+++... ...+++..++.++.||+.||.|||+++   |+||||||+|||++        
T Consensus        77 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~--------  145 (288)
T 3kfa_A           77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVG--------  145 (288)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEEC--------
T ss_pred             EEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEc--------
Confidence            999999999999999999999999763 345899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||++......... ......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       146 -----------------~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  207 (288)
T 3kfa_A          146 -----------------ENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  207 (288)
T ss_dssp             -----------------GGGCEEECCCCGGGTSCSSSSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -----------------CCCCEEEccCccceeccCCccc-cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence                             4678999999999876543322 2334567889999999999999999999999999999999


Q ss_pred             -CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 -GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                       |..||........   ......              ......+...+..+.+|+.+||+.||.+||++.++++.|+.+
T Consensus       208 ~g~~p~~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          208 YGMSPYPGIDLSQV---YELLEK--------------DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             TSCCSSTTCCGGGH---HHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHH---HHHHhc--------------cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence             9999976533211   111110              011111223357889999999999999999999999998754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=5.8e-46  Score=372.02  Aligned_cols=254  Identities=24%  Similarity=0.300  Sum_probs=181.5

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~l  212 (511)
                      .+.||+|+||.||+|.+..         +++.||||++...   ....+.+|+.+|+.+. ||||+++++++.+....||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l   83 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKK---------SNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFL   83 (325)
T ss_dssp             SCCSEEETTEEEEEEEETT---------TCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCccccCCCeEEEEEEECC---------CCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEE
Confidence            3789999999999999875         6789999999753   2356789999999997 9999999999999999999


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++..+                
T Consensus        84 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~----------------  143 (325)
T 3kn6_A           84 VMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDEN----------------  143 (325)
T ss_dssp             EECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC------------------
T ss_pred             EEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCC----------------
Confidence            99999999999999764 47999999999999999999999998   99999999999997421                


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  372 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~  372 (511)
                            ....+||+|||+++........  ....+||+.|+|||++.+..|+.++|||||||++|||++|+.||......
T Consensus       144 ------~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  215 (325)
T 3kn6_A          144 ------DNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS  215 (325)
T ss_dssp             --------CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----
T ss_pred             ------CcccEEEeccccceecCCCCCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccc
Confidence                  2347999999999865543222  33457899999999999999999999999999999999999999764332


Q ss_pred             Cch-hHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          373 GEH-NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       373 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ... .............        ..+........+..+.+||.+||+.||.+|||+.+++++
T Consensus       216 ~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          216 LTCTSAVEIMKKIKKGD--------FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             --CCCHHHHHHHHTTTC--------CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             cccccHHHHHHHHHcCC--------CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            110 0011110000000        000100011235789999999999999999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.9e-46  Score=375.59  Aligned_cols=277  Identities=27%  Similarity=0.351  Sum_probs=214.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEE--
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI--  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~--  205 (511)
                      .++|++.+.||+|+||.||+|++...     ...++..||||++........+.+.+|+.+|++++|+||+++++++.  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPL-----GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP   96 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTT-----SSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccC-----CCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence            36799999999999999999986431     12368899999998776555567899999999999999999999987  


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .....+||||||++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++            
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~------------  161 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVE------------  161 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEE------------
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEEC------------
Confidence            456789999999999999999765557999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|+|++|+.
T Consensus       162 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  228 (327)
T 3lxl_A          162 -------------SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD  228 (327)
T ss_dssp             -------------ETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             -------------CCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence                         47789999999998765433221 2233568899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhh--hhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          365 SMDKNRPNGEHNLVEWAR--PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      ||......    ......  ............+........+...+..+.+||.+||+.||.+|||+.+|+++|+.+..
T Consensus       229 p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          229 KSCSPSAE----FLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             GGGSHHHH----HHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             CCccccch----hhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            98642110    000000  00000000111111111222233446789999999999999999999999999987743

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6.1e-46  Score=375.34  Aligned_cols=249  Identities=27%  Similarity=0.391  Sum_probs=203.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +.|++.+.||+|+||.||+|++..         +++.||||++.......   ...+.+|+.+|++++|||||++++++.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  124 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVR---------NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL  124 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEcc---------CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            458899999999999999999865         67899999997654322   246889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..+||||||. |+|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++            
T Consensus       125 ~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~------------  188 (348)
T 1u5q_A          125 REHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLS------------  188 (348)
T ss_dssp             ETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEE------------
T ss_pred             ECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEC------------
Confidence            9999999999996 6898888766668999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHhC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~elltg  362 (511)
                                   .++.+||+|||+++.....      ....||+.|+|||++.   ...++.++|||||||++|||++|
T Consensus       189 -------------~~~~~kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g  249 (348)
T 1u5q_A          189 -------------EPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  249 (348)
T ss_dssp             -------------TTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             -------------CCCCEEEeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhC
Confidence                         4778999999999876432      2357999999999985   56789999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      +.||.......  .+...    ...       ..+.+   .....+..+.+||.+||+.||.+|||+.+++++..
T Consensus       250 ~~p~~~~~~~~--~~~~~----~~~-------~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~  308 (348)
T 1u5q_A          250 KPPLFNMNAMS--ALYHI----AQN-------ESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  308 (348)
T ss_dssp             SCTTTTSCHHH--HHHHH----HHS-------CCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred             CCCCCCCChHH--HHHHH----Hhc-------CCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence            99997543211  11100    000       00001   11123567899999999999999999999997643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1e-45  Score=393.50  Aligned_cols=254  Identities=30%  Similarity=0.434  Sum_probs=209.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ..++|++.++||+|+||.||+|+++.         +|+.||||++....   ......+.+|+.+|++++|||||+++++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~---------tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~  252 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRA---------TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA  252 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECC---------CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEE
Confidence            34679999999999999999999875         68899999996532   2234568899999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +.+.+.+|||||||+||+|.+++.... ..+++..++.++.||+.||+|||+++   ||||||||+||||+         
T Consensus       253 ~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld---------  320 (576)
T 2acx_A          253 YETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLD---------  320 (576)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC---------
T ss_pred             EeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEe---------
Confidence            999999999999999999999987543 35899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.+||+|||+++.......   ....+||+.|+|||++.+..|+.++|||||||++|||++|
T Consensus       321 ----------------~~g~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG  381 (576)
T 2acx_A          321 ----------------DHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG  381 (576)
T ss_dssp             ----------------TTSCEEECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHS
T ss_pred             ----------------CCCCeEEEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhC
Confidence                            478899999999987654332   2346899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchh-HHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          363 RRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      +.||.......... +......           .    ...++...+..+.+||.+||+.||.+||     ++.||+++
T Consensus       382 ~~PF~~~~~~~~~~~i~~~i~~-----------~----~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          382 QSPFQQRKKKIKREEVERLVKE-----------V----PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             SCSSSCSSSCCCHHHHHHHHHH-----------C----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             CCCCcccccchhHHHHHHHhhc-----------c----cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            99998654322111 1111110           0    1111223357899999999999999999     78888875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.1e-45  Score=379.09  Aligned_cols=269  Identities=19%  Similarity=0.223  Sum_probs=204.7

Q ss_pred             hcCCCCCCccccC--CCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          128 TRNFRPESLLGEG--GFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G--~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .++|+++++||+|  +||.||+|++..         +++.||||++......  ....+.+|+.+|+.++|||||+++++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~   94 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKP---------TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT   94 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETT---------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcC---------CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEE
Confidence            4679999999999  999999999875         6789999999765332  23567889999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +..++..+||||||++|+|.+++... ...+++..+..++.||+.||+|||+++   ||||||||+||||+         
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~---------  162 (389)
T 3gni_B           95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILIS---------  162 (389)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC---------
T ss_pred             EEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEc---------
Confidence            99999999999999999999999754 356899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCccccc--CCCCccccchhHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVV  355 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvi  355 (511)
                                      .++.+||+|||++.........     .......||+.|+|||++.+  ..|+.++|||||||+
T Consensus       163 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i  226 (389)
T 3gni_B          163 ----------------VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT  226 (389)
T ss_dssp             ----------------TTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHH
T ss_pred             ----------------CCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHH
Confidence                            4778999999998654321111     01122479999999999987  679999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc--------cc-------------ccccc---------CCccCCCCCH
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER--------RR-------------FYRLI---------DPRLEGHFSI  405 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~-------------~~~~~---------~~~~~~~~~~  405 (511)
                      +|||++|+.||.+.......  ...........        ..             .....         .......+..
T Consensus       227 l~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (389)
T 3gni_B          227 ACELANGHVPFKDMPATQML--LEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR  304 (389)
T ss_dssp             HHHHHHSSCTTTTCCSTTHH--HHC-------------------------------------------------------
T ss_pred             HHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcccc
Confidence            99999999999765433221  11100000000        00             00000         0000001222


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       406 ~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ..+..+.+||.+||+.||.+|||+.+++++
T Consensus       305 ~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          305 TFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             -CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            345779999999999999999999999875

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=7.4e-46  Score=368.09  Aligned_cols=267  Identities=25%  Similarity=0.304  Sum_probs=200.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-----ccHHHHHHHHHHHhCCC---CCCcc
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLAEVNFLGDLV---HLNLV  198 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~---H~nIv  198 (511)
                      ..++|++.+.||+|+||+||+|++..         +++.||||++.....     .....+.+|+.+++++.   ||||+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv   77 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPH---------SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVV   77 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTT---------TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECC---------CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeE
Confidence            46789999999999999999998765         678999999974321     12246678888877764   99999


Q ss_pred             eEeeEEEeCC-----eEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          199 KLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       199 ~l~~~~~~~~-----~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      ++++++....     ..++||||+. |+|.+++.... ..+++..++.++.||+.||+|||+++   |+||||||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~  153 (308)
T 3g33_A           78 RLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILV  153 (308)
T ss_dssp             CEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEE
T ss_pred             EeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEE
Confidence            9999998765     5799999995 69999997543 34899999999999999999999999   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +                         .++.+||+|||+++.......   .....||+.|+|||++.+..++.++|||||
T Consensus       154 ~-------------------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  205 (308)
T 3g33_A          154 T-------------------------SGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSV  205 (308)
T ss_dssp             C-------------------------TTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHH
T ss_pred             c-------------------------CCCCEEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHH
Confidence            8                         477899999999987644322   234679999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccc---cccCCccCC-------CCCHHHHHHHHHHHHHhcccC
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFY---RLIDPRLEG-------HFSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~Li~~cl~~d  422 (511)
                      ||++|||++|+.||...........+...... .....+.   ......+..       ......+..+.+||.+||+.|
T Consensus       206 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  284 (308)
T 3g33_A          206 GCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL-PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFN  284 (308)
T ss_dssp             HHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC-CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCC
Confidence            99999999999999765432211111000000 0000000   000000000       001123477899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|||+.+++++
T Consensus       285 P~~R~t~~e~l~h  297 (308)
T 3g33_A          285 PHKRISAFRALQH  297 (308)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             CccCCCHHHHhcC
Confidence            9999999999975

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.5e-45  Score=364.28  Aligned_cols=271  Identities=25%  Similarity=0.269  Sum_probs=200.5

Q ss_pred             hcCCCCC-CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          128 TRNFRPE-SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      .+.|++. ++||+|+||.||+|++..         +++.||||++..........+.+|+.+|.++ +||||+++++++.
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~   81 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLI---------TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE   81 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSS---------SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcC---------CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3568775 789999999999998765         6789999999876655567899999999885 7999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +.+..++|||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++..+         
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~---------  148 (316)
T 2ac3_A           82 EEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPN---------  148 (316)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSS---------
T ss_pred             eCCEEEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCC---------
Confidence            999999999999999999999654 46899999999999999999999998   99999999999998421         


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCccccc-----CCCCccccchhHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVV  355 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DIwSlGvi  355 (511)
                                   ....+||+|||+++........     ......+||+.|+|||++.+     ..++.++|||||||+
T Consensus       149 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i  215 (316)
T 2ac3_A          149 -------------QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI  215 (316)
T ss_dssp             -------------SSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHH
T ss_pred             -------------CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHH
Confidence                         1234999999999865422111     11223569999999999875     568899999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI----KGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      +|||++|+.||.................... ...+..+....  ..++.    ..+..+.+||.+||+.||.+|||+.+
T Consensus       216 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  292 (316)
T 2ac3_A          216 LYILLSGYPPFVGRCGSDCGWDRGEACPACQ-NMLFESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQ  292 (316)
T ss_dssp             HHHHHHSSCSCCCCCCSCSCC----CCHHHH-HHHHHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCcccccccccccccccchhHH-HHHHHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHH
Confidence            9999999999986543321000000000000 00000000000  00111    12467899999999999999999999


Q ss_pred             HHHHh
Q 010432          432 VVEAL  436 (511)
Q Consensus       432 il~~L  436 (511)
                      ++++-
T Consensus       293 ~l~hp  297 (316)
T 2ac3_A          293 VLQHP  297 (316)
T ss_dssp             HHHST
T ss_pred             HhcCh
Confidence            99853

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.1e-45  Score=375.85  Aligned_cols=275  Identities=18%  Similarity=0.230  Sum_probs=207.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-----------HHHHHHHHHHHhCCCCCC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-----------HKEWLAEVNFLGDLVHLN  196 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-----------~~~~~~E~~il~~l~H~n  196 (511)
                      .++|++.++||+|+||.||+|.+..+..    ...++.||||++.......           ...+.+|+..+..++|+|
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~  109 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSES----VGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLG  109 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSC----CCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCC
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccc----cccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCC
Confidence            4589999999999999999999875322    1146789999997654211           123456777788899999


Q ss_pred             cceEeeEEEeC----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          197 LVKLIGYCIED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       197 Iv~l~~~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      |+++++++...    ...+|||||| +++|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill  185 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLL  185 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEE
Confidence            99999998774    4589999999 99999999877678999999999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccc
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRS  347 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~  347 (511)
                      +..                       .++.+||+|||+++........     .......||+.|+|||++.+..++.++
T Consensus       186 ~~~-----------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  242 (364)
T 3op5_A          186 NYK-----------------------NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRG  242 (364)
T ss_dssp             ESS-----------------------CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHH
T ss_pred             ecC-----------------------CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchh
Confidence            731                       2678999999999765432111     011235699999999999999999999


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |||||||+||||++|+.||........  ..........  ..+..++++.+..   ...+..+.+|+..||+.||.+||
T Consensus       243 Di~slG~~l~el~~g~~Pf~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP  315 (364)
T 3op5_A          243 DLEILGYCMIQWLTGHLPWEDNLKDPK--YVRDSKIRYR--ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKP  315 (364)
T ss_dssp             HHHHHHHHHHHHHHSCCTTGGGTTCHH--HHHHHHHHHH--HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCC
T ss_pred             hHHHHHHHHHHHHhCCCCccccccCHH--HHHHHHHHhh--hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCC
Confidence            999999999999999999985432211  1111111110  1111111111110   11246789999999999999999


Q ss_pred             CHHHHHHHhcCCC
Q 010432          428 LMSEVVEALKPLP  440 (511)
Q Consensus       428 s~~eil~~L~~l~  440 (511)
                      ++.+|++.|+.+.
T Consensus       316 ~~~~l~~~l~~~~  328 (364)
T 3op5_A          316 LYENLRDILLQGL  328 (364)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999987653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.8e-46  Score=369.62  Aligned_cols=274  Identities=28%  Similarity=0.398  Sum_probs=209.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +.|++.+.||+|+||.||+|++....     ..+++.||||++..... .....+.+|+.+|++++||||+++++++...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEG-----DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED   95 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTS-----SSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred             hhhhhhhccCCCCceEEEEEEEcccc-----CccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence            46888999999999999999864321     23788999999975432 3346789999999999999999999999876


Q ss_pred             --CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 --DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 --~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                        ...++||||+++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++            
T Consensus        96 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~------------  160 (302)
T 4e5w_A           96 GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVE------------  160 (302)
T ss_dssp             --CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEE------------
T ss_pred             CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEc------------
Confidence              6689999999999999999766667999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++........ .......||..|+|||++.+..++.++|||||||++|||++|..
T Consensus       161 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  227 (302)
T 4e5w_A          161 -------------SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD  227 (302)
T ss_dssp             -------------ETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             -------------CCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccC
Confidence                         3778999999999876554322 22334578999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCchhHHHhhhhhhc--cccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLG--ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+....    ............  ....+...+........+...+..+.+||.+||+.||.+|||+.++++.|+.+
T Consensus       228 p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          228 SDSSPM----ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             GGGSHH----HHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcchh----hHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            864211    000000000000  00000011111111122333457899999999999999999999999998754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4e-46  Score=382.34  Aligned_cols=268  Identities=23%  Similarity=0.322  Sum_probs=193.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCC-CCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLV-HLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~-H~nIv~l~~~  203 (511)
                      ..++|++++.||+|+||.||+|.+..         +|+.||||++.....  .....+.+|+.+|.++. |||||+++++
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~   77 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRR---------TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNV   77 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETT---------TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECC---------CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeE
Confidence            45789999999999999999999876         678999999965422  23356789999999997 9999999999


Q ss_pred             EEeCC--eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          204 CIEDD--QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       204 ~~~~~--~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +...+  .+|||||||. |+|..++..  ..+++..+..++.||+.||+|||+++   ||||||||+|||++        
T Consensus        78 ~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~--------  143 (388)
T 3oz6_A           78 LRADNDRDVYLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLN--------  143 (388)
T ss_dssp             EECTTSSCEEEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC--------
T ss_pred             EecCCCCEEEEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEc--------
Confidence            98654  6899999996 699999865  36889999999999999999999999   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCC-------------------cceeeeeccccccccCCccccc-C
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD-------------------KTHVSTRVMGTYGYAAPEYVMT-G  341 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~-------------------~~~~~~~~~Gt~~y~aPE~~~~-~  341 (511)
                                       .++.+||+|||+|+......                   .....+..+||+.|+|||++.+ .
T Consensus       144 -----------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  206 (388)
T 3oz6_A          144 -----------------AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST  206 (388)
T ss_dssp             -----------------TTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCC
T ss_pred             -----------------CCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCC
Confidence                             47789999999998653211                   1112344689999999999986 6


Q ss_pred             CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccccccccc------------------CCccCCCC
Q 010432          342 HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI------------------DPRLEGHF  403 (511)
Q Consensus       342 ~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~  403 (511)
                      .|+.++||||||||||||++|+.||.+.........+..... .+....+..+.                  .......+
T Consensus       207 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (388)
T 3oz6_A          207 KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVID-FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIF  285 (388)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCH
T ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhC
Confidence            799999999999999999999999986543221111100000 00000000000                  00000000


Q ss_pred             ------------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          404 ------------SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       404 ------------~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                                  ....+..+.+||.+||+.||.+|||+.|++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          286 TKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence                        00224678999999999999999999999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.2e-45  Score=385.13  Aligned_cols=249  Identities=27%  Similarity=0.345  Sum_probs=205.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|.+.+.||+|+||.||+|++..         +|+.||||++.....   .....+.+|+.+|+.++||||+++++++
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~---------~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~   85 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHEL---------TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI   85 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETT---------TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3679999999999999999999875         688999999975421   2345688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..+||||||++|+|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        86 ~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~-----------  150 (476)
T 2y94_A           86 STPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLD-----------  150 (476)
T ss_dssp             ECSSEEEEEEECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEC-----------
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEe-----------
Confidence            999999999999999999999964 357999999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~  363 (511)
                                    .++.+||+|||+++.......   ....+||+.|+|||++.+..+ +.++|||||||++|||++|+
T Consensus       151 --------------~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~  213 (476)
T 2y94_A          151 --------------AHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGT  213 (476)
T ss_dssp             --------------TTCCEEECCCSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------cCCCeEEEeccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCC
Confidence                          477899999999987654332   234679999999999988766 68999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .||......   .+...+..   .          ..  ..+...+..+.+||.+||+.||.+|||+.+|+++
T Consensus       214 ~Pf~~~~~~---~~~~~i~~---~----------~~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          214 LPFDDDHVP---TLFKKICD---G----------IF--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             CSSCCSSSH---HHHHHHHT---T----------CC--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CCCCCCCHH---HHHHHHhc---C----------Cc--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            999754321   11111110   0          00  0111224678999999999999999999999985

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=5.7e-46  Score=373.36  Aligned_cols=267  Identities=25%  Similarity=0.388  Sum_probs=212.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++.....  ....++..||||+++.... .....+.+|+.+|+++ +||||+++++++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDK--DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCST--TCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccc--cccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            35689999999999999999999864211  1123578999999986543 2345688999999999 999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      ...+..++||||+++|+|.+++....               ..+++..++.++.||+.||.|||+++   |+||||||+|
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~N  187 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARN  187 (334)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGG
T ss_pred             ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccce
Confidence            99999999999999999999997543               24889999999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         .++.+||+|||+++...............||+.|+|||++.+..++.++||
T Consensus       188 Ill~-------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  242 (334)
T 2pvf_A          188 VLVT-------------------------ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  242 (334)
T ss_dssp             EEEC-------------------------TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred             EEEc-------------------------CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHH
Confidence            9998                         477899999999987665443333334567899999999998899999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |..||......   .+.......          .    ....+...+..+.+||.+||+.||.+||+
T Consensus       243 ~slG~il~ellt~g~~p~~~~~~~---~~~~~~~~~----------~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps  305 (334)
T 2pvf_A          243 WSFGVLMWEIFTLGGSPYPGIPVE---ELFKLLKEG----------H----RMDKPANCTNELYMMMRDCWHAVPSQRPT  305 (334)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHHHT----------C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHHHHHhCCCCCcCcCCHH---HHHHHHhcC----------C----CCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence            999999999999 99999754321   111111100          0    01112223567899999999999999999


Q ss_pred             HHHHHHHhcCCC
Q 010432          429 MSEVVEALKPLP  440 (511)
Q Consensus       429 ~~eil~~L~~l~  440 (511)
                      +.+|++.|+.+.
T Consensus       306 ~~ell~~L~~l~  317 (334)
T 2pvf_A          306 FKQLVEDLDRIL  317 (334)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998763

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.8e-45  Score=365.47  Aligned_cols=267  Identities=24%  Similarity=0.309  Sum_probs=200.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|++..         +|+.||||++.......  .+.+.+|+.++++++||||+++++++..
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   73 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRD---------TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR   73 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCC---------CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec
Confidence            579999999999999999999876         67899999997654322  3557899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++|||||++++|.+++.. ...+++..+..++.||+.||.|||+++   |+||||||+|||++             
T Consensus        74 ~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~-------------  136 (311)
T 4agu_A           74 KRRLHLVFEYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILIT-------------  136 (311)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-------------
T ss_pred             CCeEEEEEEeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEc-------------
Confidence            9999999999999999888754 456999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+++........  .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus       137 ------------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  202 (311)
T 4agu_A          137 ------------KHSVIKLCDFGFARLLTGPSDY--YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL  202 (311)
T ss_dssp             ------------TTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCCEEEeeCCCchhccCcccc--cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence                        4778999999999876543221  234579999999999876 6789999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhh--------hccccccccccCCccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPH--------LGERRRFYRLIDPRLEGHFS-----IKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |...........+......        ......+.....+......+     ...+..+.+||.+||+.||.+|||+.++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  282 (311)
T 4agu_A          203 WPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL  282 (311)
T ss_dssp             CCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHH
Confidence            9765432221111110000        00000000000000000000     1235678999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       283 l~h  285 (311)
T 4agu_A          283 LHH  285 (311)
T ss_dssp             HTS
T ss_pred             hcC
Confidence            975

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=6.9e-46  Score=369.02  Aligned_cols=266  Identities=27%  Similarity=0.426  Sum_probs=200.6

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceE
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKL  200 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l  200 (511)
                      ++....++|.+.+.||+|+||.||+|++....      .++..||||+++.....  ..+.+.+|+.++++++||||+++
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~  101 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL  101 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTT------SCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccC------CceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeee
Confidence            33445678999999999999999999886532      25678999999765432  23568899999999999999999


Q ss_pred             eeEEEeCC-----eEEEEEEccCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          201 IGYCIEDD-----QRLLVYEFMPRGSLENHLFR-----RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       201 ~~~~~~~~-----~~~lv~E~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                      ++++...+     ..++||||+++|+|.+++..     ....+++..++.++.||+.||.|||+++   |+||||||+||
T Consensus       102 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NI  178 (313)
T 3brb_A          102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNC  178 (313)
T ss_dssp             CEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGE
T ss_pred             eEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceE
Confidence            99998754     35999999999999999853     2356899999999999999999999998   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccch
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  350 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIw  350 (511)
                      |++                         .++.+||+|||+++...............||+.|+|||++.+..++.++|||
T Consensus       179 li~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  233 (313)
T 3brb_A          179 MLR-------------------------DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW  233 (313)
T ss_dssp             EEC-------------------------TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHH
T ss_pred             EEc-------------------------CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhH
Confidence            998                         4778999999999876544332223345678999999999999999999999


Q ss_pred             hHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          351 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       351 SlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      ||||++|||++ |..||.......   ........          .    ....+...+..+.+||.+||+.||.+||++
T Consensus       234 slG~il~el~~~g~~p~~~~~~~~---~~~~~~~~----------~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  296 (313)
T 3brb_A          234 AFGVTMWEIATRGMTPYPGVQNHE---MYDYLLHG----------H----RLKQPEDCLDELYEIMYSCWRTDPLDRPTF  296 (313)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTT----------C----CCCCBTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             HHHHHHHHHHhcCCCCCccCCHHH---HHHHHHcC----------C----CCCCCccccHHHHHHHHHHcCCChhhCcCH
Confidence            99999999999 889997643321   11111100          0    011112234678999999999999999999


Q ss_pred             HHHHHHhcCC
Q 010432          430 SEVVEALKPL  439 (511)
Q Consensus       430 ~eil~~L~~l  439 (511)
                      .+|+++|+.+
T Consensus       297 ~~l~~~L~~l  306 (313)
T 3brb_A          297 SVLRLQLEKL  306 (313)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=379.75  Aligned_cols=278  Identities=22%  Similarity=0.250  Sum_probs=213.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||+||+|++..         +++.||||++..... ...+.+.+|+.+|++++||||+++++++..
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   78 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKK---------TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECC---------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc
Confidence            3579999999999999999999876         678999999975432 334678899999999999999999999987


Q ss_pred             CC--eEEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 DD--QRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ~~--~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      .+  ..+||||||++|+|.+++....  ..+++..++.++.||+.||+|||+++   |+||||||+|||+.....     
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~-----  150 (396)
T 4eut_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGED-----  150 (396)
T ss_dssp             TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTT-----
T ss_pred             CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCC-----
Confidence            55  7899999999999999996532  34899999999999999999999998   999999999999832110     


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc--------CCCCccccchhHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--------GHLTSRSDVYSFGV  354 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--------~~~~~~~DIwSlGv  354 (511)
                                      .+..+||+|||+++.......   .....||+.|+|||++.+        ..++.++|||||||
T Consensus       151 ----------------~~~~~kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~  211 (396)
T 4eut_A          151 ----------------GQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV  211 (396)
T ss_dssp             ----------------SCEEEEECCGGGCEECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHH
T ss_pred             ----------------CceeEEEecCCCceEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHH
Confidence                            356799999999987654322   233579999999999865        56788999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCC-chhHHHhhhhhhcc-c-ccccc-------c-cCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          355 VLLEMLTGRRSMDKNRPNG-EHNLVEWARPHLGE-R-RRFYR-------L-IDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~-~-~~~~~-------~-~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      ++|||++|+.||....... .............. . .....       . -.......+....+..+.+|+.+||+.||
T Consensus       212 il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP  291 (396)
T 4eut_A          212 TFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQ  291 (396)
T ss_dssp             HHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCT
T ss_pred             HHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccCh
Confidence            9999999999997543321 11111111110000 0 00000       0 01111234557788899999999999999


Q ss_pred             CCCCCHHHHHHHhcCCCC
Q 010432          424 KARPLMSEVVEALKPLPN  441 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l~~  441 (511)
                      ++||++.++++.++.+..
T Consensus       292 ~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          292 EKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             TTSCCHHHHHHHHHHHHT
T ss_pred             hhhccHHHHHHHHHHHhh
Confidence            999999999998876543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.7e-45  Score=367.83  Aligned_cols=258  Identities=22%  Similarity=0.290  Sum_probs=207.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|++..         +|+.||||++......      ..+.+.+|+.+|++++||||++++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   81 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKS---------TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH   81 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECC---------CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEE
Confidence            4579999999999999999999875         6789999999765432      356789999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++...+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+|||++..+.    
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~----  153 (321)
T 2a2a_A           82 DVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNI----  153 (321)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTS----
T ss_pred             EEEecCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCC----
Confidence            999999999999999999999999965 457899999999999999999999998   999999999999984210    


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ....+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       154 -----------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  213 (321)
T 2a2a_A          154 -----------------PIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  213 (321)
T ss_dssp             -----------------SSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH
Confidence                             112799999999987654322   234579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |..||......   ........   ....    .++.+.    ...+..+.+||.+||+.||.+|||+.+++++-
T Consensus       214 g~~pf~~~~~~---~~~~~i~~---~~~~----~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp  274 (321)
T 2a2a_A          214 GASPFLGDTKQ---ETLANITS---VSYD----FDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRHP  274 (321)
T ss_dssp             SCCSSCCSSHH---HHHHHHHT---TCCC----CCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred             CCCCCCCCCHH---HHHHHHHh---cccc----cChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence            99999754321   11111100   0000    000000    11246789999999999999999999999853

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.7e-45  Score=386.03  Aligned_cols=265  Identities=23%  Similarity=0.259  Sum_probs=197.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|+++++||+|+||+||+|++..         +++.||||++....  ....+.+.+|+.+|+.++|||||++++++.
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~  131 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAV---------LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT  131 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETT---------TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECC---------CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEc
Confidence            4689999999999999999999876         68899999997642  223456889999999999999999999996


Q ss_pred             eC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 ED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..      ...|||||||.+ +|.+.+..   .+++..+..++.||+.||+|||+++   ||||||||+||||+      
T Consensus       132 ~~~~~~~~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~------  198 (464)
T 3ttj_A          132 PQKTLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK------  198 (464)
T ss_dssp             SCCSTTTCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC------
T ss_pred             cCCccccCCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEe------
Confidence            54      457999999965 67777643   4889999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+|||+++......   ..+..+||+.|+|||++.+..|+.++||||||||||||
T Consensus       199 -------------------~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  256 (464)
T 3ttj_A          199 -------------------SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  256 (464)
T ss_dssp             -------------------TTSCEEECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             -------------------CCCCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence                               47789999999998765432   23446899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhh----------------hhcccc-----ccccccCCccCCC---CCHHHHHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARP----------------HLGERR-----RFYRLIDPRLEGH---FSIKGAQKAAQLA  415 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~----------------~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~Li  415 (511)
                      ++|+.||.+.........+.....                ......     .+.......+...   .....+..+.+||
T Consensus       257 l~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl  336 (464)
T 3ttj_A          257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  336 (464)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHH
Confidence            999999976542211111100000                000000     0000000000000   0112267799999


Q ss_pred             HHhcccCCCCCCCHHHHHHHh
Q 010432          416 AHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       416 ~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .+||+.||.+|||+.|++++-
T Consensus       337 ~~mL~~dP~~R~ta~e~L~Hp  357 (464)
T 3ttj_A          337 SKMLVIDPAKRISVDDALQHP  357 (464)
T ss_dssp             HHHSCSSTTTSCCHHHHHTST
T ss_pred             HHHcCCChhhCCCHHHHhcCh
Confidence            999999999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.8e-45  Score=368.59  Aligned_cols=246  Identities=23%  Similarity=0.291  Sum_probs=204.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------cHHHHHHHHHHHhCCCCCCcc
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------GHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~H~nIv  198 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||++......        ....+.+|+.+|++++||||+
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv   92 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKE---------KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANII   92 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETT---------TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBC
T ss_pred             cccceEEEeEEEecCCEEEEEEEECC---------CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEe
Confidence            35689999999999999999999876         6789999999865421        123467899999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRG-SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g-~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ++++++...+..++||||+.+| +|.+++... ..+++..++.|+.||+.||.|||+++   |+||||||+|||++    
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~----  164 (335)
T 3dls_A           93 KVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIA----  164 (335)
T ss_dssp             CEEEEEECSSEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----
T ss_pred             eEEEEEeeCCEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEc----
Confidence            9999999999999999999777 999998544 46999999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVL  356 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil  356 (511)
                                           .++.+||+|||+++.......   .....||+.|+|||++.+..+ +.++|||||||++
T Consensus       165 ---------------------~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  220 (335)
T 3dls_A          165 ---------------------EDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL  220 (335)
T ss_dssp             ---------------------TTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred             ---------------------CCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHH
Confidence                                 477899999999987655432   234679999999999988877 8899999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |||++|+.||......            .      .....      .+...+..+.+||.+||+.||.+|||+.+|+++-
T Consensus       221 ~el~~g~~pf~~~~~~------------~------~~~~~------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp  276 (335)
T 3dls_A          221 YTLVFEENPFCELEET------------V------EAAIH------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP  276 (335)
T ss_dssp             HHHHHSSCSCSSGGGG------------T------TTCCC------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred             HHHHhCCCchhhHHHH------------H------hhccC------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            9999999999642110            0      00000      0111246789999999999999999999999964


Q ss_pred             c
Q 010432          437 K  437 (511)
Q Consensus       437 ~  437 (511)
                      .
T Consensus       277 ~  277 (335)
T 3dls_A          277 W  277 (335)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=5.8e-46  Score=363.78  Aligned_cols=260  Identities=26%  Similarity=0.363  Sum_probs=206.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|++.+.||+|+||.||+|++....      .++..||||++..... ...+.+.+|+.++++++||||+++++++.
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   83 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE   83 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTT------CCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCC------CCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc
Confidence            3467999999999999999999876432      2456799999986532 23467889999999999999999999876


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      + +..++||||+++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        84 ~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~------------  147 (281)
T 3cc6_A           84 E-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVA------------  147 (281)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEE------------
T ss_pred             C-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEC------------
Confidence            4 4578999999999999999876667999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   .++.+||+|||++......... ......||+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus       148 -------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~  213 (281)
T 3cc6_A          148 -------------SPECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ  213 (281)
T ss_dssp             -------------ETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             -------------CCCcEEeCccCCCccccccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCC
Confidence                         3678999999999876543222 1233567889999999998999999999999999999998 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||........   .......    .          ....+...++.+.+|+.+||+.||.+||++.+++++|+.+
T Consensus       214 p~~~~~~~~~---~~~~~~~----~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          214 PFFWLENKDV---IGVLEKG----D----------RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             TTTTSCGGGH---HHHHHHT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcccCChHHH---HHHHhcC----C----------CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            9975433221   1111100    0          0011112346789999999999999999999999999765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.5e-46  Score=373.63  Aligned_cols=270  Identities=26%  Similarity=0.407  Sum_probs=213.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEe
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      ++....++|++.+.||+|+||.||+|++...    ....++..||||++..... .....+.+|+.+|++++||||++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGV----VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEE----ETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCc----cCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            3344567899999999999999999987521    0112467899999976533 2334688999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      +++...+..++|||||++|+|.+++....         ..+++..++.++.||+.||.|||+++   |+||||||+|||+
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence            99999999999999999999999986421         45789999999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +                         .++.+||+|||+++...............||+.|+|||++.+..++.++|||||
T Consensus       172 ~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  226 (322)
T 1p4o_A          172 A-------------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF  226 (322)
T ss_dssp             C-------------------------TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             c-------------------------CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHH
Confidence            8                         477899999999986544332222233467899999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          353 GVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       353 Gvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||++|||++ |..||......   ........    ..          ....+...+..+.+||.+||+.||.+|||+.+
T Consensus       227 G~il~el~~~g~~p~~~~~~~---~~~~~~~~----~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  289 (322)
T 1p4o_A          227 GVVLWEIATLAEQPYQGLSNE---QVLRFVME----GG----------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLE  289 (322)
T ss_dssp             HHHHHHHHHTSCCTTTTSCHH---HHHHHHHT----TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHhcCCCccccCCHH---HHHHHHHc----CC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence            999999999 89999754221   11111110    00          00111223567899999999999999999999


Q ss_pred             HHHHhcCCCC
Q 010432          432 VVEALKPLPN  441 (511)
Q Consensus       432 il~~L~~l~~  441 (511)
                      ++++|+.+..
T Consensus       290 ~l~~L~~~~~  299 (322)
T 1p4o_A          290 IISSIKEEME  299 (322)
T ss_dssp             HHHHHGGGSC
T ss_pred             HHHHHHHhhc
Confidence            9999987643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=3.8e-46  Score=370.92  Aligned_cols=272  Identities=27%  Similarity=0.376  Sum_probs=215.4

Q ss_pred             ChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCc
Q 010432          120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNL  197 (511)
Q Consensus       120 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nI  197 (511)
                      ....+....++|++.+.||+|+||.||+|++....    ...+++.||||++...... ..+.+.+|+.+|.++ +||||
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i   93 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV   93 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCC----ccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCe
Confidence            34445556789999999999999999999875311    1236789999999865432 335688999999999 79999


Q ss_pred             ceEeeEEEeCC-eEEEEEEccCCCCHHHHHhhCCC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 010432          198 VKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSL---------------PLPWSIRMKIALGAAKGLAFLHEEAERPVI  261 (511)
Q Consensus       198 v~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~qi~~gL~yLH~~~~~~ii  261 (511)
                      +++++++...+ ..++|||||++|+|.+++.....               .+++..++.++.||+.||.|||+++   |+
T Consensus        94 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~  170 (316)
T 2xir_A           94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CI  170 (316)
T ss_dssp             CCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             eeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            99999987754 58999999999999999975432               2789999999999999999999998   99


Q ss_pred             ecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC
Q 010432          262 YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG  341 (511)
Q Consensus       262 HrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~  341 (511)
                      ||||||+|||++                         .++.+||+|||+++...............||+.|+|||++.+.
T Consensus       171 H~dikp~Nil~~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  225 (316)
T 2xir_A          171 HRDLAARNILLS-------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR  225 (316)
T ss_dssp             CSCCSGGGEEEC-------------------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             cccCccceEEEC-------------------------CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccc
Confidence            999999999998                         3678999999999876554443334446789999999999999


Q ss_pred             CCCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcc
Q 010432          342 HLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       342 ~~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~  420 (511)
                      .++.++|||||||++|||++ |..||.......  .+.......          .    ....+...+..+.+|+.+||+
T Consensus       226 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~~----------~----~~~~~~~~~~~l~~li~~~l~  289 (316)
T 2xir_A          226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEG----------T----RMRAPDYTTPEMYQTMLDCWH  289 (316)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HHHHHHHHT----------C----CCCCCTTCCHHHHHHHHHHTC
T ss_pred             cccchhHHHHHHHHHHHHHhCCCCCCcccchhH--HHHHHhccC----------c----cCCCCCCCCHHHHHHHHHHcC
Confidence            99999999999999999998 999997654321  111111100          0    001111234678999999999


Q ss_pred             cCCCCCCCHHHHHHHhcCC
Q 010432          421 RDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       421 ~dP~~RPs~~eil~~L~~l  439 (511)
                      .||.+|||+.+|+++|+.+
T Consensus       290 ~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          290 GEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             SSGGGSCCHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999999999999999755

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.3e-45  Score=367.08  Aligned_cols=255  Identities=24%  Similarity=0.321  Sum_probs=194.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++.......   ...+.+|+.++++++||||+++++++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   81 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLR---------DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG   81 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECC---------CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEee
Confidence            4689999999999999999999865         67899999998754333   24688999999999999999999998


Q ss_pred             EeCC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          205 IEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       205 ~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ....    ..|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   |+||||||+|||++       
T Consensus        82 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~-------  150 (311)
T 3ork_A           82 EAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS-------  150 (311)
T ss_dssp             EEEETTEEEEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-------
T ss_pred             eccCCCCcccEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEc-------
Confidence            7654    349999999999999999654 46899999999999999999999998   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                        .++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||
T Consensus       151 ------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  212 (311)
T 3ork_A          151 ------------------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV  212 (311)
T ss_dssp             ------------------TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence                              4778999999999876543221 122335799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ++|+.||.......      ................        ....+..+.+||.+||+.||.+||++.+++.
T Consensus       213 l~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~  273 (311)
T 3ork_A          213 LTGEPPFTGDSPVS------VAYQHVREDPIPPSAR--------HEGLSADLDAVVLKALAKNPENRYQTAAEMR  273 (311)
T ss_dssp             HHSSCSCCCSSHHH------HHHHHHHCCCCCHHHH--------STTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             HhCCCCCCCCChHH------HHHHHhcCCCCCcccc--------cCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence            99999997543211      1011110000000000        0112467899999999999999997766654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.1e-46  Score=374.85  Aligned_cols=265  Identities=25%  Similarity=0.374  Sum_probs=211.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|.+...+.    ......||||++..... ...+.+.+|+.+|+++ +||||+++++++
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGK----EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSS----SCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCc----ccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34689999999999999999999865322    11345899999976543 2345688999999999 899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEE
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRR-------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL  271 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NIL  271 (511)
                      ...+..++|||||++|+|.+++...             ...+++..++.++.||+.||.|||+++   |+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence            9999999999999999999998642             345799999999999999999999998   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchh
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  351 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwS  351 (511)
                      ++                         .++.+||+|||+++...............||+.|+|||++.+..++.++||||
T Consensus       197 ~~-------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  251 (333)
T 2i1m_A          197 LT-------------------------NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS  251 (333)
T ss_dssp             EE-------------------------GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHH
T ss_pred             EC-------------------------CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHH
Confidence            98                         46789999999998765443333334456889999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          352 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       352 lGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      |||++|||++ |..||........  ........              .....+...+..+.+||.+||+.||.+|||+.
T Consensus       252 lG~il~el~t~g~~p~~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  315 (333)
T 2i1m_A          252 YGILLWEIFSLGLNPYPGILVNSK--FYKLVKDG--------------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ  315 (333)
T ss_dssp             HHHHHHHHTTTSCCSSTTCCSSHH--HHHHHHHT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHcCCCCCCcccchhHH--HHHHHhcC--------------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence            9999999998 9999976533211  11111110              00111112246789999999999999999999


Q ss_pred             HHHHHhcCC
Q 010432          431 EVVEALKPL  439 (511)
Q Consensus       431 eil~~L~~l  439 (511)
                      +|++.|+.+
T Consensus       316 ~l~~~L~~~  324 (333)
T 2i1m_A          316 QICSFLQEQ  324 (333)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=9.2e-46  Score=359.58  Aligned_cols=253  Identities=23%  Similarity=0.305  Sum_probs=202.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|++.           +..||||++......  ..+.+.+|+.++++++||||+++++++.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-----------~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   77 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-----------GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ   77 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-----------TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEEC
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-----------CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEc
Confidence            357899999999999999999873           568999999865432  2356899999999999999999999998


Q ss_pred             eC--CeEEEEEEccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          206 ED--DQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       206 ~~--~~~~lv~E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ..  +..++||||+++|+|.+++..... .+++..++.++.||+.||.|||+++ .+|+||||||+|||++         
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~---------  147 (271)
T 3kmu_A           78 SPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMID---------  147 (271)
T ss_dssp             TTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEEC---------
T ss_pred             cCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEc---------
Confidence            76  788999999999999999976433 5899999999999999999999876 5599999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCc---cccchhHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS---RSDVYSFGVVLLEM  359 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~---~~DIwSlGvil~el  359 (511)
                                      .++.++|+|||++......       ...||+.|+|||++.+..++.   ++|||||||++|||
T Consensus       148 ----------------~~~~~~l~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el  204 (271)
T 3kmu_A          148 ----------------EDMTARISMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWEL  204 (271)
T ss_dssp             ----------------TTSCEEEEGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHH
T ss_pred             ----------------CCcceeEEeccceeeeccc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHH
Confidence                            4677888888777653322       246899999999998765554   79999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ++|+.||.......   ....   ...          .......+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus       205 ~~g~~p~~~~~~~~---~~~~---~~~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          205 VTREVPFADLSNME---IGMK---VAL----------EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             HHCSCTTTTSCHHH---HHHH---HHH----------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhCCCCccccChHH---HHHH---HHh----------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            99999997543211   1000   000          0011112223357799999999999999999999999999765


Q ss_pred             C
Q 010432          440 P  440 (511)
Q Consensus       440 ~  440 (511)
                      .
T Consensus       269 ~  269 (271)
T 3kmu_A          269 Q  269 (271)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-45  Score=371.50  Aligned_cols=263  Identities=24%  Similarity=0.407  Sum_probs=204.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|.+.++||+|+||.||+|++...+.     ..+..||||+++..... ....+.+|+.++++++||||+++++++..
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSG-----KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK  117 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC--------CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCC-----CccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            3578888999999999999998865221     12457999999865332 23468899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..+|||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus       118 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~-------------  181 (333)
T 1mqb_A          118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVN-------------  181 (333)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-------------
T ss_pred             CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEEC-------------
Confidence            99999999999999999999877678999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                  .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus       182 ------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  249 (333)
T 1mqb_A          182 ------------SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER  249 (333)
T ss_dssp             ------------TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ------------CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCC
Confidence                        47789999999998765432211 1222456889999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ||......   .+......    .          .....+...+..+.+||.+||+.||.+||++.+|++.|+.+.
T Consensus       250 pf~~~~~~---~~~~~~~~----~----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          250 PYWELSNH---EVMKAIND----G----------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             TTTTCCHH---HHHHHHHT----T----------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CcccCCHH---HHHHHHHC----C----------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99654321   11111110    0          001112233577899999999999999999999999997654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=9.2e-46  Score=371.18  Aligned_cols=270  Identities=22%  Similarity=0.296  Sum_probs=196.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|+++++||+|+||+||+|++..         +++.||||+++......  ...+.+|+.+|++++||||+++++++.
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTV---------TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH  103 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT---------TTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECC---------CCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe
Confidence            3579999999999999999999875         68899999997654322  345789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .++..+||||||. |+|.+++... ..+++..++.|+.||+.||.|||+++   |+||||||+|||++..+..       
T Consensus       104 ~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~-------  171 (329)
T 3gbz_A          104 HNHRLHLIFEYAE-NDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDAS-------  171 (329)
T ss_dssp             ETTEEEEEEECCS-EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----------
T ss_pred             cCCEEEEEEecCC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCC-------
Confidence            9999999999996 5999999654 36899999999999999999999998   9999999999999642210       


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   +...+||+|||+++.......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.
T Consensus       172 -------------~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  236 (329)
T 3gbz_A          172 -------------ETPVLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP  236 (329)
T ss_dssp             --------------CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------ccceEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence                         356799999999986543222  12345789999999999874 58999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhh-hccccc---------ccccc----CCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          365 SMDKNRPNGEHNLVEWARPH-LGERRR---------FYRLI----DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ||........  +....... ......         +....    ...+...+....+..+.+||.+||+.||.+|||+.
T Consensus       237 pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  314 (329)
T 3gbz_A          237 LFPGDSEIDQ--LFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK  314 (329)
T ss_dssp             SSCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CcCCCCHHHH--HHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHH
Confidence            9976432211  11111000 000000         00000    00000000111346789999999999999999999


Q ss_pred             HHHHH
Q 010432          431 EVVEA  435 (511)
Q Consensus       431 eil~~  435 (511)
                      |++++
T Consensus       315 e~l~h  319 (329)
T 3gbz_A          315 NALEH  319 (329)
T ss_dssp             HHHTS
T ss_pred             HHhCC
Confidence            99974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3.5e-45  Score=357.31  Aligned_cols=255  Identities=22%  Similarity=0.274  Sum_probs=205.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|.+..         ++..||+|++........+.+.+|+.++++++||||+++++++...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKG---------TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN   78 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCC---------CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4579999999999999999999875         6779999999876555667899999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||+....           
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~-----------  143 (277)
T 3f3z_A           79 TDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDS-----------  143 (277)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSS-----------
T ss_pred             CeEEEEEeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCC-----------
Confidence            9999999999999999988654 46899999999999999999999998   99999999999994211           


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .+..+||+|||++........   .....||+.|+|||++.+ .++.++|||||||++|||++|+.||.
T Consensus       144 -----------~~~~~~l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~  208 (277)
T 3f3z_A          144 -----------PDSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFS  208 (277)
T ss_dssp             -----------TTCCEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -----------CCCcEEEEecccceeccCccc---hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCC
Confidence                       467899999999987654332   233579999999998765 48999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....   ........   .....        ........+..+.+||.+||+.||.+||++.+++++
T Consensus       209 ~~~~~---~~~~~~~~---~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          209 APTDS---EVMLKIRE---GTFTF--------PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             CSSHH---HHHHHHHH---CCCCC--------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCCHH---HHHHHHHh---CCCCC--------CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            54321   11111100   00000        000000124678999999999999999999999863

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=2.6e-45  Score=360.25  Aligned_cols=254  Identities=26%  Similarity=0.338  Sum_probs=199.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|.+.+.||+|+||.||+|++..         ++..||||++..... ...+.+.+|+.+|++++||||+++++++...
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   92 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERS---------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY   92 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hheeecceeccCCCeEEEEEEEcc---------CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC
Confidence            568889999999999999999875         677999999976532 3456789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          208 DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...++|||||++|+|.+++..   ....+++..++.++.||+.||.|||+++   |+||||||+|||++...        
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~--------  161 (285)
T 3is5_A           93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTS--------  161 (285)
T ss_dssp             SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSS--------
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCC--------
Confidence            999999999999999998853   2467999999999999999999999998   99999999999996311        


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.......   .....||+.|+|||++. ..++.++|||||||++|||++|+.
T Consensus       162 --------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~  223 (285)
T 3is5_A          162 --------------PHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCL  223 (285)
T ss_dssp             --------------TTCCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEEeeecceecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCC
Confidence                          356799999999987544322   23467999999999875 578999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   ........   ....        .... ....++.+.+||.+||+.||.+|||+.||+++
T Consensus       224 pf~~~~~~---~~~~~~~~---~~~~--------~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          224 PFTGTSLE---EVQQKATY---KEPN--------YAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             SSCCSSHH---HHHHHHHH---CCCC--------CCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             CCCCCCHH---HHHhhhcc---CCcc--------cccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            99754321   11111100   0000        0000 00124678899999999999999999999874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.6e-45  Score=358.42  Aligned_cols=250  Identities=26%  Similarity=0.407  Sum_probs=185.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|++..         +++.||||++.....   .....+.+|+.++++++||||+++++++.
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   81 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIH---------TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE   81 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEcc---------CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc
Confidence            579999999999999999999865         678999999964321   22356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..++||||+++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~------------  146 (278)
T 3cok_A           82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLT------------  146 (278)
T ss_dssp             CSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEEC------------
T ss_pred             cCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEc------------
Confidence            999999999999999999999876678999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||++.........  .....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       147 -------------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  211 (278)
T 3cok_A          147 -------------RNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP  211 (278)
T ss_dssp             -------------TTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCCEEEEeecceeeccCCCCc--ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                         4778999999999876533221  2235799999999999988999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..........                ......  ...+...+..+.+||.+||+.||.+||++.+++++
T Consensus       212 ~~~~~~~~~~~----------------~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          212 FDTDTVKNTLN----------------KVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             SCCCSCC---------------------CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCChhHHHHHH----------------HHhhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            97643221100                000000  01112234678999999999999999999999874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-45  Score=362.38  Aligned_cols=259  Identities=25%  Similarity=0.368  Sum_probs=208.3

Q ss_pred             hcCCCCCC-ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPES-LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|.+.+ .||+|+||.||+|.+...       .++..||||+++.... ...+.+.+|+.++++++||||+++++++ 
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-   79 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMR-------KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-   79 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC----------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             HHHhhhhhccccccCceeEEEeEeccC-------CCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-
Confidence            35677776 899999999999987532       2477899999987533 2345688999999999999999999999 


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..++||||+++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~------------  144 (287)
T 1u59_A           80 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLV------------  144 (287)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEE------------
T ss_pred             cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEc------------
Confidence            556789999999999999999766667999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                   .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++ |+
T Consensus       145 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  211 (287)
T 1u59_A          145 -------------NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  211 (287)
T ss_dssp             -------------ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             -------------CCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence                         37789999999998765433221 1223457899999999998899999999999999999998 99


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .||.......   +.......              ....++...+..+.+||.+||+.||.+||++.+|+++|+.+
T Consensus       212 ~p~~~~~~~~---~~~~i~~~--------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          212 KPYKKMKGPE---VMAFIEQG--------------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             CTTTTCCTHH---HHHHHHTT--------------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcccCCHHH---HHHHHhcC--------------CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            9997643321   11111100              01112223457899999999999999999999999999765

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=3.3e-45  Score=356.97  Aligned_cols=255  Identities=25%  Similarity=0.355  Sum_probs=206.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|.+..         +++.||||++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   76 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRV---------TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE   76 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECC---------CCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc
Confidence            4679999999999999999999875         577999999975432 334678899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~-------------  139 (276)
T 2yex_A           77 GNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLD-------------  139 (276)
T ss_dssp             TTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-------------
T ss_pred             CCEEEEEEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEc-------------
Confidence            9999999999999999999854 346899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|||++|+.|
T Consensus       140 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  207 (276)
T 2yex_A          140 ------------ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP  207 (276)
T ss_dssp             ------------TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             ------------cCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCC
Confidence                        477899999999986543332222344679999999999987765 7899999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |........ ....+...     ..   ..      ......+..+.+||.+||+.||.+|||+.+|+++
T Consensus       208 ~~~~~~~~~-~~~~~~~~-----~~---~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          208 WDQPSDSCQ-EYSDWKEK-----KT---YL------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             CSCSCTTSH-HHHHHHTT-----CT---TS------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCchHHH-HHHHhhhc-----cc---cc------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            976543221 11111110     00   00      0011234678899999999999999999999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.1e-45  Score=388.59  Aligned_cols=253  Identities=27%  Similarity=0.390  Sum_probs=206.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.++||+|+||.||+|+++.         +|+.||||++.....   .....+.+|+.+|++++|||||++++++
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~---------tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~  254 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKA---------TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF  254 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECC---------CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            4689999999999999999999875         688999999975421   2345688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ...+.+|||||||+||+|.+++...   ...+++..++.++.||+.||.|||+++   ||||||||+||||+        
T Consensus       255 ~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~--------  323 (543)
T 3c4z_A          255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLD--------  323 (543)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC--------
T ss_pred             eeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEe--------
Confidence            9999999999999999999998653   346899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||+++........  ....+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus       324 -----------------~~g~vkL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyellt  384 (543)
T 3c4z_A          324 -----------------DDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA  384 (543)
T ss_dssp             -----------------TTSCEEECCCTTCEECCTTCCC--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEEeecceeeeccCCCcc--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHh
Confidence                             4788999999999876543321  234589999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCc-hhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 010432          362 GRRSMDKNRPNGE-HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVE  434 (511)
Q Consensus       362 g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~-----~eil~  434 (511)
                      |+.||........ ..+....   ....            ..++...+..+.+||.+||+.||.+||++     .+|++
T Consensus       385 G~~PF~~~~~~~~~~~~~~~i---~~~~------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          385 ARGPFRARGEKVENKELKQRV---LEQA------------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             SSCSSCCTTCCCCHHHHHHHH---HHCC------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             CCCCCCCCccchhHHHHHHHH---hhcc------------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            9999986543221 1111111   1100            11122335788999999999999999975     55654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2e-45  Score=371.22  Aligned_cols=272  Identities=18%  Similarity=0.202  Sum_probs=201.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-----------cHHHHHHHHHHHhCCCCCC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-----------GHKEWLAEVNFLGDLVHLN  196 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-----------~~~~~~~E~~il~~l~H~n  196 (511)
                      .++|++.+.||+|+||.||+|++...+.      ++..||||++......           ....+.+|+.++..++|||
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~n  109 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPE------KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLG  109 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCG------GGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCC------ccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccC
Confidence            3679999999999999999999875322      4678999999865421           1134678899999999999


Q ss_pred             cceEeeEEEe----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          197 LVKLIGYCIE----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       197 Iv~l~~~~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      |+++++++..    ....||||||| +++|.+++.... .+++..++.|+.||+.||+|||+++   |+||||||+|||+
T Consensus       110 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  184 (345)
T 2v62_A          110 IPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLL  184 (345)
T ss_dssp             CCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred             cceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEE
Confidence            9999999988    77899999999 999999986544 7999999999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccc
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRS  347 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~  347 (511)
                      +..                       ....+||+|||+++........     .......||+.|+|||++.+..++.++
T Consensus       185 ~~~-----------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  241 (345)
T 2v62_A          185 GYK-----------------------NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRS  241 (345)
T ss_dssp             ESS-----------------------STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHH
T ss_pred             ccC-----------------------CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchh
Confidence            841                       1238999999999865432111     011345799999999999999999999


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccc-cccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-FYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      |||||||++|||++|+.||......... .............. +.....       ....+..+.+||.+||+.||.+|
T Consensus       242 Di~slG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~R  313 (345)
T 2v62_A          242 DVEILGYCMLRWLCGKLPWEQNLKDPVA-VQTAKTNLLDELPQSVLKWAP-------SGSSCCEIAQFLVCAHSLAYDEK  313 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCTTGGGTTCHHH-HHHHHHHHHHTTTHHHHHHSC-------TTSCCHHHHHHHHHHHTCCTTCC
T ss_pred             hHHHHHHHHHHHHhCCCCccccccccHH-HHHHHHhhcccccHHHHhhcc-------ccccHHHHHHHHHHHhhcCcccC
Confidence            9999999999999999999643222111 11110000000000 000000       00124689999999999999999


Q ss_pred             CCHHHHHHHhcCCCC
Q 010432          427 PLMSEVVEALKPLPN  441 (511)
Q Consensus       427 Ps~~eil~~L~~l~~  441 (511)
                      |++.+|++.|+.+..
T Consensus       314 ps~~~l~~~L~~~~~  328 (345)
T 2v62_A          314 PNYQALKKILNPHGI  328 (345)
T ss_dssp             CCHHHHHHHHCTTCC
T ss_pred             CCHHHHHHHHhccCC
Confidence            999999999987643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.6e-46  Score=359.72  Aligned_cols=255  Identities=27%  Similarity=0.425  Sum_probs=209.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|.+..          +..||||++..... ..+.+.+|+.++++++||||+++++++...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   75 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLN----------KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ   75 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT----------TEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             hhheeeeeEecCCCceeEEEEEecC----------CCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            4678899999999999999998853          56899999987643 346789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++              
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~--------------  138 (267)
T 3t9t_A           76 APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG--------------  138 (267)
T ss_dssp             SSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEEC--------------
T ss_pred             CCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEC--------------
Confidence            9999999999999999999877667999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 .++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus       139 -----------~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  206 (267)
T 3t9t_A          139 -----------ENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  206 (267)
T ss_dssp             -----------GGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             -----------CCCCEEEcccccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCC
Confidence                       367899999999986543211 11223467889999999998999999999999999999999 89999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ......   .........          .    ....+...+..+.+|+.+||+.||.+||++.+++++|+.+
T Consensus       207 ~~~~~~---~~~~~i~~~----------~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          207 ENRSNS---EVVEDISTG----------F----RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             TTCCHH---HHHHHHHTT----------C----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCHH---HHHHHHhcC----------C----cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            754321   111111100          0    0011112356789999999999999999999999999755

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.3e-45  Score=364.99  Aligned_cols=267  Identities=24%  Similarity=0.366  Sum_probs=202.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC--CCCCcceEee
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL--VHLNLVKLIG  202 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l--~H~nIv~l~~  202 (511)
                      ....++|++.+.||+|+||.||+|++           +++.||||++....   ...+.+|.+++..+  +||||+++++
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~   98 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKW-----------RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIA   98 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEE-----------TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEE
T ss_pred             cccccceEEEeEeecCCCeEEEEEEE-----------CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEE
Confidence            34557899999999999999999987           36799999996432   34556677777665  9999999999


Q ss_pred             EEEeC----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCCCeEecccCCCcE
Q 010432          203 YCIED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE--------AERPVIYRDFKTSNI  270 (511)
Q Consensus       203 ~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~--------~~~~iiHrDLKp~NI  270 (511)
                      ++...    ...++|||||++|+|.+++...  .+++..++.++.||+.||.|||++        +   ||||||||+||
T Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Ni  173 (337)
T 3mdy_A           99 ADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNI  173 (337)
T ss_dssp             EEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGE
T ss_pred             EEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHE
Confidence            99887    7899999999999999999654  689999999999999999999988        6   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccCCCCcc--
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTGHLTSR--  346 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~--  346 (511)
                      |++                         .++.+||+|||+++.........  ......||+.|+|||++.+..++..  
T Consensus       174 ll~-------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  228 (337)
T 3mdy_A          174 LVK-------------------------KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQ  228 (337)
T ss_dssp             EEC-------------------------TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTH
T ss_pred             EEC-------------------------CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCcccc
Confidence            998                         47789999999997654432211  1123579999999999987766655  


Q ss_pred             ----ccchhHHHHHHHHHhC----------CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCC-CCHHHHHHH
Q 010432          347 ----SDVYSFGVVLLEMLTG----------RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH-FSIKGAQKA  411 (511)
Q Consensus       347 ----~DIwSlGvil~elltg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  411 (511)
                          +|||||||++|||++|          ..||.......... ... .....     .....+.+... ....++..+
T Consensus       229 ~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~-~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~l  301 (337)
T 3mdy_A          229 SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY-EDM-REIVC-----IKKLRPSFPNRWSSDECLRQM  301 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH-HHH-HHHHT-----TSCCCCCCCGGGGGSHHHHHH
T ss_pred             CccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch-hhh-HHHHh-----hhccCccccccchhhHHHHHH
Confidence                9999999999999999          56665432221110 000 00000     00111111111 123667889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhcCCCCC
Q 010432          412 AQLAAHCLSRDPKARPLMSEVVEALKPLPNL  442 (511)
Q Consensus       412 ~~Li~~cl~~dP~~RPs~~eil~~L~~l~~~  442 (511)
                      .+||.+||+.||.+|||+.+|+++|+.+...
T Consensus       302 ~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          302 GKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            9999999999999999999999999876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.3e-45  Score=386.17  Aligned_cols=259  Identities=26%  Similarity=0.403  Sum_probs=205.0

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .+..++|++.+.||+|+||.||+|.+..          +..||||+++.... ..+.|.+|+.+|++++||||+++++++
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~  248 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNG----------TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVV  248 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETT----------TEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECC----------CceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3445678999999999999999999863          45799999986543 356799999999999999999999998


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      .. +..+||||||++|+|.+++... ...+++..++.++.||+.||+|||+++   ||||||||+|||++          
T Consensus       249 ~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~----------  314 (452)
T 1fmk_A          249 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVG----------  314 (452)
T ss_dssp             CS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC----------
T ss_pred             cC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEC----------
Confidence            65 6789999999999999999643 346899999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-C
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g  362 (511)
                                     .++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||+||||++ |
T Consensus       315 ---------------~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g  378 (452)
T 1fmk_A          315 ---------------ENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG  378 (452)
T ss_dssp             ---------------GGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             ---------------CCCCEEECCCccceecCCCcee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCC
Confidence                           4778999999999876543221 2233457889999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      +.||.+....   .........              .....+..++..+.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       379 ~~P~~~~~~~---~~~~~i~~~--------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          379 RVPYPGMVNR---EVLDQVERG--------------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CCSSTTCCHH---HHHHHHHTT--------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCCCHH---HHHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            9999754321   111111100              0111222345788999999999999999999999999988754

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.1e-46  Score=372.91  Aligned_cols=266  Identities=23%  Similarity=0.317  Sum_probs=197.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++++.||+|+||.||+|++..         +++.||||++....... ...+.+|+.+|++++||||+++++++...
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   72 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKL---------TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE   72 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS
T ss_pred             CceEEEEEEcCCCCEEEEEEEECC---------CCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC
Confidence            578999999999999999999875         67799999997543221 12356799999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..+|||||+. |+|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++              
T Consensus        73 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~--------------  134 (324)
T 3mtl_A           73 KSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLIN--------------  134 (324)
T ss_dssp             SCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEEC--------------
T ss_pred             CEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEEC--------------
Confidence            99999999996 6999999877777999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+++........  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus       135 -----------~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf  201 (324)
T 3mtl_A          135 -----------ERGELKLADFGLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF  201 (324)
T ss_dssp             -----------TTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             -----------CCCCEEEccCcccccccCCccc--cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                       4778999999999865433221  234578999999999876 57899999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccc---------cCCccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRL---------IDPRLEGH----FSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      .+.........+....... ....+...         ..+.....    .....+..+.+||.+||+.||.+|||+.|++
T Consensus       202 ~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  280 (324)
T 3mtl_A          202 PGSTVEEQLHFIFRILGTP-TEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM  280 (324)
T ss_dssp             CCSSHHHHHHHHHHHHCCC-CTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHhCCC-ChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHh
Confidence            7654322111111100000 00000000         00000000    0112246789999999999999999999998


Q ss_pred             HH
Q 010432          434 EA  435 (511)
Q Consensus       434 ~~  435 (511)
                      ++
T Consensus       281 ~h  282 (324)
T 3mtl_A          281 KH  282 (324)
T ss_dssp             TS
T ss_pred             cC
Confidence            74

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.3e-45  Score=377.72  Aligned_cols=259  Identities=24%  Similarity=0.326  Sum_probs=197.0

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------cHHHHHHHHHHHhCCCCCCc
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------GHKEWLAEVNFLGDLVHLNL  197 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~H~nI  197 (511)
                      ...++|.+.+.||+|+||.||+|.+..         +++.||||++......        ....+.+|+.+|++++||||
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni  202 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERK---------TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI  202 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTB
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECC---------CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCE
Confidence            456789999999999999999999876         6789999999754211        11247899999999999999


Q ss_pred             ceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          198 VKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       198 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      |++++++. .+..+||||||++|+|.+++... ..+++..+..++.||+.||+|||+++   |+||||||+|||++..+ 
T Consensus       203 v~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~-  276 (419)
T 3i6u_A          203 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQE-  276 (419)
T ss_dssp             CCCCEEEE-SSEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSS-
T ss_pred             eeEEEEEe-cCceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCC-
Confidence            99999975 55689999999999999988544 57999999999999999999999998   99999999999997422 


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc---CCCCccccchhHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGV  354 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DIwSlGv  354 (511)
                                           ++..+||+|||+++......   .....+||+.|+|||++.+   ..|+.++|||||||
T Consensus       277 ---------------------~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~  332 (419)
T 3i6u_A          277 ---------------------EDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV  332 (419)
T ss_dssp             ---------------------SSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHH
T ss_pred             ---------------------CcceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHH
Confidence                                 24569999999999765432   2334679999999999863   67889999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          355 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       355 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ++|||++|+.||........  +........   ..   .. +...    ...+..+.+||.+||+.||.+||++.++++
T Consensus       333 il~~lltg~~pf~~~~~~~~--~~~~i~~~~---~~---~~-~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          333 ILFICLSGYPPFSEHRTQVS--LKDQITSGK---YN---FI-PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHHHHHSSCSSCCCSSSCC--HHHHHHTTC---CC---CC-HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCCCcchHH--HHHHHhcCC---CC---CC-chhh----cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            99999999999976433211  111111000   00   00 0000    112467899999999999999999999998


Q ss_pred             Hh
Q 010432          435 AL  436 (511)
Q Consensus       435 ~L  436 (511)
                      +-
T Consensus       400 hp  401 (419)
T 3i6u_A          400 HP  401 (419)
T ss_dssp             SG
T ss_pred             Cc
Confidence            53

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=6.8e-45  Score=358.30  Aligned_cols=266  Identities=20%  Similarity=0.231  Sum_probs=205.7

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEE-E
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYC-I  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~-~  205 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||++......  ..+.+|+.+++.++|++++..+.++ .
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~   75 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIA---------AGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGA   75 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETT---------TTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcC---------CCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecC
Confidence            34789999999999999999999865         6789999987654322  3478899999999988877766655 6


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..++||||+ +++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++...         
T Consensus        76 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~---------  142 (296)
T 4hgt_A           76 EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGK---------  142 (296)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGG---------
T ss_pred             CCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccC---------
Confidence            678889999999 99999999866668999999999999999999999998   99999999999994211         


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                   +++.+||+|||+++........     .......||+.|+|||++.+..++.++|||||||++|||+
T Consensus       143 -------------~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  209 (296)
T 4hgt_A          143 -------------KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN  209 (296)
T ss_dssp             -------------GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHh
Confidence                         4678999999999876543221     1123467999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhh-hccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPH-LGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      +|+.||.................. ....   ...    +..    ..+..+.+|+.+||+.||.+||++.+|++.|+.+
T Consensus       210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          210 LGSLPWQGLKAATKRQKYERISEKKMSTP---IEV----LCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HSSCTTSSCCCSSSSSHHHHHHHHHHHSC---HHH----HTT----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             cCCCCCcccchhhhhhhhhhhhcccccch---hhh----hhc----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            999999875544332222211110 0000   000    001    1246789999999999999999999999999765


Q ss_pred             C
Q 010432          440 P  440 (511)
Q Consensus       440 ~  440 (511)
                      .
T Consensus       279 ~  279 (296)
T 4hgt_A          279 F  279 (296)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=4.3e-45  Score=357.85  Aligned_cols=256  Identities=23%  Similarity=0.321  Sum_probs=206.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|.+..         ++..||+|++......  ....+.+|+.++++++||||+++++++.
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKT---------TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ   75 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcC---------CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE
Confidence            4689999999999999999999876         6779999999765332  2356789999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ..+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++..+         
T Consensus        76 ~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~---------  142 (284)
T 3kk8_A           76 EESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKA---------  142 (284)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSS---------
T ss_pred             cCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCC---------
Confidence            999999999999999999988654 46899999999999999999999998   99999999999998422         


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   ....+||+|||++........   .....||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       143 -------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  206 (284)
T 3kk8_A          143 -------------KGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP  206 (284)
T ss_dssp             -------------TTCCEEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCcEEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCC
Confidence                         245599999999987654332   2335799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |......   ........   ...   ..     ........+..+.+|+.+||+.||.+|||+.+++++
T Consensus       207 f~~~~~~---~~~~~~~~---~~~---~~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          207 FWDEDQH---RLYAQIKA---GAY---DY-----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             SCCSSHH---HHHHHHHH---TCC---CC-----CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             CCCCchh---HHHHHHHh---ccc---cC-----CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            9754321   11111110   000   00     000111234678999999999999999999999874

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-45  Score=372.00  Aligned_cols=262  Identities=22%  Similarity=0.253  Sum_probs=200.3

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-----cccHHHHHHHHHHHhCCCCCCcce
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLGDLVHLNLVK  199 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~il~~l~H~nIv~  199 (511)
                      ....++|++.+.||+|+||.||+|++..         ++..||||++....     ....+.+.+|+.+|++++|||||+
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   92 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQ---------TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR   92 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECC---------CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3456789999999999999999999865         67799999986532     233467899999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEccCCCCHHHHHhhC---------------------------------------CCCCCHHHHHH
Q 010432          200 LIGYCIEDDQRLLVYEFMPRGSLENHLFRR---------------------------------------SLPLPWSIRMK  240 (511)
Q Consensus       200 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~  240 (511)
                      +++++.+.+..+||||||++|+|.+++...                                       ...+++..++.
T Consensus        93 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (345)
T 3hko_A           93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN  172 (345)
T ss_dssp             EEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred             eehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence            999999999999999999999999988410                                       11235677888


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCC--
Q 010432          241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGD--  318 (511)
Q Consensus       241 i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~--  318 (511)
                      ++.||+.||+|||+++   |+||||||+|||++..                       ....+||+|||+++......  
T Consensus       173 i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~-----------------------~~~~~kl~Dfg~a~~~~~~~~~  226 (345)
T 3hko_A          173 IMRQIFSALHYLHNQG---ICHRDIKPENFLFSTN-----------------------KSFEIKLVDFGLSKEFYKLNNG  226 (345)
T ss_dssp             HHHHHHHHHHHHHHTT---EECCCCCGGGEEESCS-----------------------SSCCEEECCCTTCEEGGGTTCC
T ss_pred             HHHHHHHHHHHHHHCC---ccccCCChhhEEEecC-----------------------CCceEEEeeccccccccccCcc
Confidence            9999999999999998   9999999999999741                       13379999999998643211  


Q ss_pred             cceeeeeccccccccCCccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccC
Q 010432          319 KTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID  396 (511)
Q Consensus       319 ~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (511)
                      .........||+.|+|||++.+  ..++.++|||||||++|||++|+.||.......   ....   .......   .  
T Consensus       227 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~---~~~~~~~---~--  295 (345)
T 3hko_A          227 EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD---TISQ---VLNKKLC---F--  295 (345)
T ss_dssp             --------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH---HHHCCCC---T--
T ss_pred             ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH---HHHH---HHhcccc---c--
Confidence            1112334679999999999875  678999999999999999999999997543211   1111   1111000   0  


Q ss_pred             CccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       397 ~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                         ........+..+.+||.+||+.||.+||++.+++++
T Consensus       296 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          296 ---ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             ---TSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             ---CCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence               000011235678999999999999999999999984

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-45  Score=376.72  Aligned_cols=260  Identities=27%  Similarity=0.435  Sum_probs=197.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      ..|.+.++||+|+||.||+|++.....      .+..||||.++.... ...+.+.+|+.+|++++|||||++++++.. 
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~  162 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS  162 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTT------EEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCC------cEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence            357778899999999999998864211      245799999975432 334678999999999999999999998754 


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus       163 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~-------------  226 (373)
T 3c1x_A          163 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLD-------------  226 (373)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-------------
T ss_pred             CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEEC-------------
Confidence            45789999999999999999876677899999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                  .++.+||+|||+++........  .......||+.|+|||++.+..++.++|||||||++|||++ |.
T Consensus       227 ------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~  294 (373)
T 3c1x_A          227 ------------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA  294 (373)
T ss_dssp             ------------TTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ------------CCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcC
Confidence                        4778999999999865443211  11233567889999999999999999999999999999999 67


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      +||..........   ....    ..   ..       ..+..++..+.+||.+||+.||.+||++.+|++.|+.+
T Consensus       295 ~p~~~~~~~~~~~---~~~~----~~---~~-------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          295 PPYPDVNTFDITV---YLLQ----GR---RL-------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             CSCTTSCSSCHHH---HHHT----TC---CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHH---HHHc----CC---CC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            7776544332211   1110    00   00       11112356789999999999999999999999999765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.9e-45  Score=368.34  Aligned_cols=255  Identities=26%  Similarity=0.427  Sum_probs=203.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcE--EEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT--VAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~--vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ++|++.+.||+|+||.||+|++..         ++..  ||||.+..... ...+.+.+|+.+|+++ +||||+++++++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~   95 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKK---------DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC   95 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEE---------TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEcc---------CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee
Confidence            578999999999999999999875         4554  49999875432 2335688999999999 999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      ...+..+|||||+++|+|.+++....               ..+++..++.++.||+.||.|||+++   |+||||||+|
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~N  172 (327)
T 1fvr_A           96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARN  172 (327)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGG
T ss_pred             eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccce
Confidence            99999999999999999999996543               46899999999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         .++.+||+|||+++......   ......+|+.|+|||++.+..++.++||
T Consensus       173 Il~~-------------------------~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di  224 (327)
T 1fvr_A          173 ILVG-------------------------ENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDV  224 (327)
T ss_dssp             EEEC-------------------------GGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHH
T ss_pred             EEEc-------------------------CCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcc
Confidence            9998                         36789999999998543211   1223457889999999998899999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |+.||......   .+.....    ..          .....+...+..+.+||.+||+.||.+||+
T Consensus       225 ~slG~il~ellt~g~~pf~~~~~~---~~~~~~~----~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  287 (327)
T 1fvr_A          225 WSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLP----QG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPS  287 (327)
T ss_dssp             HHHHHHHHHHHTTSCCTTTTCCHH---HHHHHGG----GT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHHHHHHHHHHcCCCCCCCCCcHH---HHHHHhh----cC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            999999999998 99999754321   1111110    00          011112233577899999999999999999


Q ss_pred             HHHHHHHhcCCC
Q 010432          429 MSEVVEALKPLP  440 (511)
Q Consensus       429 ~~eil~~L~~l~  440 (511)
                      +.+++++|+.+.
T Consensus       288 ~~ell~~L~~~~  299 (327)
T 1fvr_A          288 FAQILVSLNRML  299 (327)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999997654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=4.2e-45  Score=361.94  Aligned_cols=255  Identities=23%  Similarity=0.320  Sum_probs=204.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|.+.+.||+|+||.||+|++..         +|+.||||++..........+.+|+.++++++||||+++++++...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   78 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRL---------TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST   78 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hccceeeeeccCCCCceEEEEEECC---------CCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC
Confidence            4578999999999999999999875         6789999999866544446788999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||+....           
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~-----------  143 (304)
T 2jam_A           79 THYYLVMQLVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPE-----------  143 (304)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSS-----------
T ss_pred             CEEEEEEEcCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCC-----------
Confidence            9999999999999999998654 36899999999999999999999998   99999999999994211           


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 +++.+||+|||+++......    .....||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       144 -----------~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  208 (304)
T 2jam_A          144 -----------ENSKIMITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY  208 (304)
T ss_dssp             -----------TTCCEEBCSCSTTCCCCCBT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -----------CCCCEEEccCCcceecCCCc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                       46789999999998654322    223569999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .....   .+......   ...   .     .........+..+.+||.+||+.||.+||++.+++++
T Consensus       209 ~~~~~---~~~~~i~~---~~~---~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          209 EETES---KLFEKIKE---GYY---E-----FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             TSCHH---HHHHHHHH---CCC---C-----CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCHH---HHHHHHHc---CCC---C-----CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            54321   11111110   000   0     0111112235778999999999999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=7.3e-45  Score=367.72  Aligned_cols=269  Identities=24%  Similarity=0.319  Sum_probs=203.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||.||+|++..         +|+.||||++......  ....+.+|+.+|+.++||||+++++++..
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   87 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRK---------TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT   87 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETT---------TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             cceeEEEEEecCCCcEEEEEEECC---------CCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeec
Confidence            579999999999999999999875         6789999998655332  23568899999999999999999999987


Q ss_pred             --------CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          207 --------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       207 --------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                              .+..+||||||. |+|.+.+......+++..++.++.||+.||.|||+++   |+||||||+|||++     
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~-----  158 (351)
T 3mi9_A           88 KASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLIT-----  158 (351)
T ss_dssp             C--------CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-----
T ss_pred             cccccccCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEc-----
Confidence                    346899999996 5888888776667999999999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc--ceeeeeccccccccCCccccc-CCCCccccchhHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV  355 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~--~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvi  355 (511)
                                          .++.+||+|||+++.......  ........||+.|+|||++.+ ..++.++|||||||+
T Consensus       159 --------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  218 (351)
T 3mi9_A          159 --------------------RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  218 (351)
T ss_dssp             --------------------TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             --------------------CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHH
Confidence                                477899999999986543211  112234678999999999876 568999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc-------cccccccCCccCCCCCH--H-----HHHHHHHHHHHhccc
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER-------RRFYRLIDPRLEGHFSI--K-----GAQKAAQLAAHCLSR  421 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~-----~~~~~~~Li~~cl~~  421 (511)
                      +|||++|+.||.+.........+..........       .................  .     .++.+.+||.+||+.
T Consensus       219 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  298 (351)
T 3mi9_A          219 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL  298 (351)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCS
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcC
Confidence            999999999998654322211111111100000       00000000000000000  0     135688999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 010432          422 DPKARPLMSEVVEA  435 (511)
Q Consensus       422 dP~~RPs~~eil~~  435 (511)
                      ||.+|||+.|++++
T Consensus       299 dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          299 DPAQRIDSDDALNH  312 (351)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             ChhhCCCHHHHhCC
Confidence            99999999999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.8e-45  Score=356.89  Aligned_cols=248  Identities=26%  Similarity=0.412  Sum_probs=201.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         ++..||||++.....   .....+.+|+.++++++||||+++++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   78 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF   78 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEcc---------CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE
Confidence            4679999999999999999999876         577999999965321   2235688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+..++||||+++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        79 ~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~-----------  143 (279)
T 3fdn_A           79 HDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLG-----------  143 (279)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEEC-----------
T ss_pred             ecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEc-----------
Confidence            9999999999999999999998654 46899999999999999999999988   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||++.......    .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       144 --------------~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  205 (279)
T 3fdn_A          144 --------------SAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP  205 (279)
T ss_dssp             --------------TTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCC
Confidence                          47789999999997654332    234579999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||.......   .......           ..    ..++...+..+.+||.+||+.||.+||++.+|+++
T Consensus       206 p~~~~~~~~---~~~~~~~-----------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          206 PFEANTYQE---TYKRISR-----------VE----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             TTCCSSHHH---HHHHHHH-----------TC----CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCCCcHHH---HHHHHHh-----------CC----CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            997543211   1111000           00    01112234678999999999999999999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=7.3e-45  Score=378.24  Aligned_cols=200  Identities=29%  Similarity=0.398  Sum_probs=166.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.++||+|+||.||+|++..         +++.||||++.....  ...+.+.+|+.+|++++|+|||++++++.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~   95 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKN---------TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII   95 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT---------TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECC---------CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEe
Confidence            3689999999999999999999876         688999999976432  23357889999999999999999999997


Q ss_pred             eC-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 ED-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ..     ...||||||+. |+|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+||||+       
T Consensus        96 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~-------  163 (432)
T 3n9x_A           96 PDDLLKFDELYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLN-------  163 (432)
T ss_dssp             CSCTTTCCCEEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC-------
T ss_pred             cCCCCcCCeEEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEEC-------
Confidence            76     57899999995 699999854 457999999999999999999999999   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcc--------------------eeeeeccccccccCCccc-c
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--------------------HVSTRVMGTYGYAAPEYV-M  339 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--------------------~~~~~~~Gt~~y~aPE~~-~  339 (511)
                                        .++.+||+|||+|+........                    ...+..+||+.|+|||++ .
T Consensus       164 ------------------~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  225 (432)
T 3n9x_A          164 ------------------QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL  225 (432)
T ss_dssp             ------------------TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT
T ss_pred             ------------------CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc
Confidence                              4778999999999876543211                    113457899999999986 4


Q ss_pred             cCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          340 TGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       340 ~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                      ...|+.++||||||||||||++|..||
T Consensus       226 ~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          226 QENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             CCCCCcccccchHHHHHHHHHhccccc
Confidence            567999999999999999999854444

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.9e-45  Score=394.99  Aligned_cols=257  Identities=25%  Similarity=0.367  Sum_probs=203.0

Q ss_pred             CCCCCC-ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          130 NFRPES-LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++.+.+ .||+|+||.||+|.++..+       ++..||||+++.... ...+.+.+|+.+|++++|||||++++++.. 
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~-------~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-  407 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRK-------KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-  407 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSS-------CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCC-------CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-
Confidence            344444 7999999999999886421       466899999986533 345789999999999999999999999976 


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..+||||||++|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+              
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~--------------  470 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLV--------------  470 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEE--------------
T ss_pred             CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEc--------------
Confidence            5689999999999999999776677999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                 .++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||+||||++ |+.|
T Consensus       471 -----------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~P  539 (613)
T 2ozo_A          471 -----------NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP  539 (613)
T ss_dssp             -----------ETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -----------CCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                       4778999999999876543221 11222346789999999999999999999999999999998 9999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.......   +...+..    .          ....++..++..+.+||.+||+.||.+||++.+|++.|+.+
T Consensus       540 f~~~~~~~---~~~~i~~----~----------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          540 YKKMKGPE---VMAFIEQ----G----------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             TTTCCSHH---HHHHHHT----T----------CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCHHH---HHHHHHc----C----------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            97654321   1111111    0          01112233457899999999999999999999999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2e-45  Score=366.14  Aligned_cols=262  Identities=26%  Similarity=0.336  Sum_probs=204.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++........+.+.+|+.++++++||||+++++++.. 
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   98 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLH---------DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE   98 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETT---------TCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecC---------CCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec
Confidence            4689999999999999999999865         678999999976555555678999999999999999999999873 


Q ss_pred             ---CCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 ---DDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ---~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                         ....++||||+++|+|.+++..   ....+++..++.++.||+.||.|||+++   |+||||||+|||++       
T Consensus        99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~-------  168 (317)
T 2buj_A           99 RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLG-------  168 (317)
T ss_dssp             ETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC-------
T ss_pred             cCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEc-------
Confidence               3478899999999999999865   3567999999999999999999999998   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcce-------eeeeccccccccCCcccccCC---CCccccch
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-------VSTRVMGTYGYAAPEYVMTGH---LTSRSDVY  350 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-------~~~~~~Gt~~y~aPE~~~~~~---~~~~~DIw  350 (511)
                                        .++.+||+|||++..........       ......||+.|+|||++.+..   ++.++|||
T Consensus       169 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  230 (317)
T 2buj_A          169 ------------------DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVW  230 (317)
T ss_dssp             ------------------TTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHH
T ss_pred             ------------------CCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHH
Confidence                              47789999999987643211000       011245799999999987554   78999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ||||++|||++|+.||........ .......    .          ..........+..+.+||.+||+.||.+||++.
T Consensus       231 slG~il~el~~g~~p~~~~~~~~~-~~~~~~~----~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  295 (317)
T 2buj_A          231 SLGCVLYAMMFGEGPYDMVFQKGD-SVALAVQ----N----------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIP  295 (317)
T ss_dssp             HHHHHHHHHHHSSCTTHHHHHTTS-CHHHHHH----C----------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHHhCCCChhhhhcccc-hhhHHhh----c----------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHH
Confidence            999999999999999953111000 0000000    0          000011122356799999999999999999999


Q ss_pred             HHHHHhcCCCC
Q 010432          431 EVVEALKPLPN  441 (511)
Q Consensus       431 eil~~L~~l~~  441 (511)
                      +|+++|+.+..
T Consensus       296 ~ll~~L~~~~~  306 (317)
T 2buj_A          296 LLLSQLEALQP  306 (317)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHhhhcCC
Confidence            99999987753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=4e-45  Score=385.99  Aligned_cols=255  Identities=25%  Similarity=0.349  Sum_probs=204.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC--cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG--LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.++||+|+||+||+|++..         +++.||||++....  ......+.+|+.+|++++|||||++++++.
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   91 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRI---------TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE   91 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETT---------TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECC---------CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE
Confidence            4579999999999999999999875         67899999996432  233467899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .....++|||||.+|+|.+++... ..+++..+..++.||+.||.|||+++   ||||||||+|||++...         
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~---------  158 (486)
T 3mwu_A           92 DSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKE---------  158 (486)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSS---------
T ss_pred             cCCEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCC---------
Confidence            999999999999999999988654 46899999999999999999999998   99999999999997422         


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .+..+||+|||+++.......   ....+||+.|+|||++.+ .|+.++||||||||+|+|++|..|
T Consensus       159 -------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~p  221 (486)
T 3mwu_A          159 -------------KDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP  221 (486)
T ss_dssp             -------------TTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCCEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCC
Confidence                         356799999999987644322   234579999999998875 599999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+....   .+......   ....        .........+..+.+||.+||+.||.+|||+.+++++
T Consensus       222 f~~~~~~---~~~~~i~~---~~~~--------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          222 FYGKNEY---DILKRVET---GKYA--------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             SCCSSHH---HHHHHHHH---TCCC--------SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CCCCCHH---HHHHHHHh---CCCC--------CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            9764321   11111110   0000        0000011235778999999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=9.1e-46  Score=370.67  Aligned_cols=267  Identities=26%  Similarity=0.380  Sum_probs=204.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++....    ...++..||||++..... .....+.+|+.++++++||||+++++++..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMP----NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  104 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC------------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCC----CCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence            467999999999999999999864311    112678999999975432 234568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRS------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .+..+||||||++|+|.+++....      ..+++..++.++.||+.||.|||+++   |+||||||+|||++..+    
T Consensus       105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~----  177 (327)
T 2yfx_A          105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPG----  177 (327)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSS----
T ss_pred             CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCC----
Confidence            999999999999999999997543      35889999999999999999999998   99999999999998422    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        ++..+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+
T Consensus       178 ------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  239 (327)
T 2yfx_A          178 ------------------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF  239 (327)
T ss_dssp             ------------------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence                              24569999999997543332222233456899999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          361 T-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       361 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      + |..||......   .........    .          ....+...+..+.+||.+||+.||.+||++.+|+++|+.+
T Consensus       240 t~g~~p~~~~~~~---~~~~~~~~~----~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          240 SLGYMPYPSKSNQ---EVLEFVTSG----G----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TTSCCSSTTCCHH---HHHHHHHTT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCCcCHH---HHHHHHhcC----C----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            8 99999754321   111111100    0          0111122356789999999999999999999999999765


Q ss_pred             C
Q 010432          440 P  440 (511)
Q Consensus       440 ~  440 (511)
                      .
T Consensus       303 ~  303 (327)
T 2yfx_A          303 T  303 (327)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-45  Score=361.76  Aligned_cols=260  Identities=23%  Similarity=0.358  Sum_probs=205.4

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .|.+.++||+|+||+||+|++.....      ++..||+|++..... ...+.+.+|+.++++++||||+++++++...+
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   95 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQ------NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE   95 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSS------CEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCC------ceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC
Confidence            56667899999999999999865322      355899999976443 23457889999999999999999999998766


Q ss_pred             eE-EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          209 QR-LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       209 ~~-~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      .. ++||||+.+|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++              
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~--------------  158 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLD--------------  158 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC--------------
T ss_pred             CCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEc--------------
Confidence            55 9999999999999999876778999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                 +++.+||+|||+++........  .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       159 -----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~  227 (298)
T 3pls_A          159 -----------ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP  227 (298)
T ss_dssp             -----------TTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             -----------CCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCC
Confidence                       4778999999999865442211  112335689999999999999999999999999999999996655


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |......  ..+........              ....+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus       228 ~~~~~~~--~~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          228 PYRHIDP--FDLTHFLAQGR--------------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             TTTTSCG--GGHHHHHHTTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCccCCH--HHHHHHhhcCC--------------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            5432221  11111111100              0111122346789999999999999999999999999765

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5.6e-45  Score=359.09  Aligned_cols=265  Identities=20%  Similarity=0.228  Sum_probs=209.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEE-Ee
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYC-IE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~-~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++......  ..+.+|+.+++.++|++++..+.++ ..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIA---------AGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAE   76 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT---------TTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcC---------CCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCC
Confidence            4689999999999999999999865         6789999998765433  4588999999999988877666555 56


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+ +++|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++...          
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~----------  142 (296)
T 3uzp_A           77 GDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGK----------  142 (296)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGG----------
T ss_pred             CCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCC----------
Confidence            78889999999 99999999766668999999999999999999999998   99999999999995211          


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                  +++.+||+|||+++.........     ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       143 ------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  210 (296)
T 3uzp_A          143 ------------KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL  210 (296)
T ss_dssp             ------------GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHh
Confidence                        36789999999998765433211     1234679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhh-hhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARP-HLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |+.||................. .....   ..    .+..    ..+..+.+|+.+||+.||.+||++.+|++.|+.+.
T Consensus       211 g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          211 GSLPWQGLKAATKRQKYERISEKKMSTP---IE----VLCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             SSCTTSSCCCSSSSSHHHHHHHHHHHSC---HH----HHTT----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             CCCCCCCcCchhhhhhhhhhcccccCCc---hH----HHHh----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence            9999987544332222211111 00000   00    0011    12467899999999999999999999999998664

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.7e-45  Score=386.19  Aligned_cols=255  Identities=24%  Similarity=0.349  Sum_probs=201.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++++.||+|+||+||+|++..         ++..||||++.....  .....+.+|+.+|+.++|||||++++++.
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  106 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKV---------THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE  106 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETT---------TCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECC---------CCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            3579999999999999999999876         678999999976532  23467899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .....|||||||++|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++..+         
T Consensus       107 ~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~---------  173 (494)
T 3lij_A          107 DKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKE---------  173 (494)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSS---------
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCC---------
Confidence            999999999999999999988654 46899999999999999999999998   99999999999997422         


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .+..+||+|||+++.......   ....+||+.|+|||++. ..|+.++|||||||++|+|++|..|
T Consensus       174 -------------~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~p  236 (494)
T 3lij_A          174 -------------KDALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP  236 (494)
T ss_dssp             -------------TTCCEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCcEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCC
Confidence                         255699999999987654322   33467999999999875 5799999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |......   .+...+..   ...   ....+.     ....+..+.+||.+||+.||.+|||+.+++++
T Consensus       237 f~~~~~~---~~~~~i~~---~~~---~~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          237 FGGQTDQ---EILRKVEK---GKY---TFDSPE-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             SCCSSHH---HHHHHHHH---TCC---CCCSGG-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CCCCCHH---HHHHHHHh---CCC---CCCchh-----cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            9764321   11111110   000   000000     01224678999999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.8e-45  Score=361.87  Aligned_cols=261  Identities=26%  Similarity=0.406  Sum_probs=203.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|++.++||+|+||+||+|++.....      ....||||.+..... ...+.+.+|+.++++++||||+++++++..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   97 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR   97 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCC------ceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc
Confidence            3578889999999999999999764322      345799999986433 234568899999999999999999998654


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       ++..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        98 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~------------  162 (298)
T 3f66_A           98 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLD------------  162 (298)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC------------
T ss_pred             CCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEC------------
Confidence             56789999999999999999776677899999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-C
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g  362 (511)
                                   .++.+||+|||+++........  .......||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus       163 -------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~  229 (298)
T 3f66_A          163 -------------EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  229 (298)
T ss_dssp             -------------TTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             -------------CCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence                         4778999999999876543221  12334568899999999999999999999999999999999 5


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .+||.........   ......          .    ....+...+..+.+|+.+||+.||.+||++.++++.|+.+
T Consensus       230 ~~~~~~~~~~~~~---~~~~~~----------~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          230 APPYPDVNTFDIT---VYLLQG----------R----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             CCSSTTSCTTTHH---HHHHTT----------C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHH---HHHhcC----------C----CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            5566544332211   111000          0    0001112246789999999999999999999999999765

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.3e-45  Score=370.17  Aligned_cols=258  Identities=22%  Similarity=0.303  Sum_probs=189.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~  206 (511)
                      ..+|++.++||+|+||.||+|++..         +++.||||++..........+.+|+.++.++. ||||+++++++..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~   97 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVG---------SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASI   97 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETT---------TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             CceEEEEEEEccCCceEEEEEEECC---------CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccc
Confidence            4579999999999999999999875         67899999997665555567899999999995 9999999999953


Q ss_pred             --------CCeEEEEEEccCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          207 --------DDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       207 --------~~~~~lv~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                              ....++||||+. |+|.+++..  ....+++..++.++.||+.||.|||+++ ++|+||||||+|||++   
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~---  172 (337)
T 3ll6_A           98 GKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLS---  172 (337)
T ss_dssp             CTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEEC---
T ss_pred             cccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEEC---
Confidence                    345789999995 799998864  3457999999999999999999999875 4599999999999998   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce----------eeeeccccccccCCccc---ccCCC
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH----------VSTRVMGTYGYAAPEYV---MTGHL  343 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~----------~~~~~~Gt~~y~aPE~~---~~~~~  343 (511)
                                            .++.+||+|||+++.........          ......||+.|+|||++   .+..+
T Consensus       173 ----------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  230 (337)
T 3ll6_A          173 ----------------------NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI  230 (337)
T ss_dssp             ----------------------TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCS
T ss_pred             ----------------------CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCC
Confidence                                  47789999999998765432211          11135699999999998   56678


Q ss_pred             CccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       344 ~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +.++|||||||++|||++|+.||........      ..    .          ..........+..+.+||.+||+.||
T Consensus       231 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~----~----------~~~~~~~~~~~~~~~~li~~~l~~~p  290 (337)
T 3ll6_A          231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRI------VN----G----------KYSIPPHDTQYTVFHSLIRAMLQVNP  290 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCCC--------------------------------CCCCTTCCSSGGGHHHHHHHSCSSG
T ss_pred             ChHHhHHHHHHHHHHHHhCCCCCcchhHHHh------hc----C----------cccCCcccccchHHHHHHHHHccCCh
Confidence            9999999999999999999999965322110      00    0          00000011112457899999999999


Q ss_pred             CCCCCHHHHHHHhcCCCC
Q 010432          424 KARPLMSEVVEALKPLPN  441 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l~~  441 (511)
                      .+||++.+++++|+.+..
T Consensus       291 ~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          291 EERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999987644

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.9e-45  Score=367.02  Aligned_cols=272  Identities=31%  Similarity=0.427  Sum_probs=208.0

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe--C
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE--D  207 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~--~  207 (511)
                      |++++.||+|+||+||+|.+...     ...+++.||||+++.... .....+.+|+.+|++++||||+++++++.+  .
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPT-----NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA  107 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSC-----C--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred             HhhhheecCCCCeEEEEEEEccC-----CCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence            48899999999999999977542     223788999999986543 224568899999999999999999999988  4


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      ...++||||+++|+|.+++...  .+++..++.++.||+.||.|||+++   |+||||||+|||++              
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~--------------  168 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLD--------------  168 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------
T ss_pred             ceEEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEc--------------
Confidence            6789999999999999999654  4899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       169 -----------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~  237 (318)
T 3lxp_A          169 -----------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS  237 (318)
T ss_dssp             -----------TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             -----------CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcc
Confidence                       4778999999999877654322 1233456889999999999999999999999999999999999998


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ....... .....+..... ....+...+........+..++..+.+||.+||+.||.+|||+.+|++.|+.+
T Consensus       238 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          238 QSPPTKF-LELIGIAQGQM-TVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             GSHHHHH-HHHHCSCCHHH-HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccchhh-hhhhcccccch-hHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            6421100 00000000000 00001111111112222334467899999999999999999999999999765

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.4e-45  Score=375.89  Aligned_cols=265  Identities=23%  Similarity=0.336  Sum_probs=199.0

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ....++|++.+.||+|+||+||+|++..         +|+.||||++......    ..+|+.+|+.++|||||++++++
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~---------~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~   69 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIE---------SGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYF   69 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETT---------TCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECC---------CCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhhee
Confidence            3456789999999999999999999876         6789999999765322    34799999999999999999998


Q ss_pred             Ee--------------------------------------CCeEEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHH
Q 010432          205 IE--------------------------------------DDQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIAL  243 (511)
Q Consensus       205 ~~--------------------------------------~~~~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~  243 (511)
                      ..                                      ....++|||||+ |+|.+.+.   .....+++..+..++.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~  148 (383)
T 3eb0_A           70 YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIY  148 (383)
T ss_dssp             EEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             eecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence            54                                      334889999997 58877765   3456799999999999


Q ss_pred             HHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceee
Q 010432          244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVS  323 (511)
Q Consensus       244 qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~  323 (511)
                      ||+.||.|||+++   |+||||||+|||++.                        +++.+||+|||+++.......   .
T Consensus       149 qi~~aL~~LH~~g---i~H~Dikp~Nil~~~------------------------~~~~~kl~Dfg~a~~~~~~~~---~  198 (383)
T 3eb0_A          149 QLFRAVGFIHSLG---ICHRDIKPQNLLVNS------------------------KDNTLKLCDFGSAKKLIPSEP---S  198 (383)
T ss_dssp             HHHHHHHHHHTTT---EECSCCCGGGEEEET------------------------TTTEEEECCCTTCEECCTTSC---C
T ss_pred             HHHHHHHHHHHCc---CccCccCHHHEEEcC------------------------CCCcEEEEECCCCcccCCCCC---C
Confidence            9999999999998   999999999999973                        367899999999987644332   2


Q ss_pred             eeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhc-cc-------c-----
Q 010432          324 TRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-ER-------R-----  389 (511)
Q Consensus       324 ~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~-------~-----  389 (511)
                      ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+......  +......... ..       .     
T Consensus       199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~g~p~~~~~~~~~~~~~~~  276 (383)
T 3eb0_A          199 VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQ--LVRIIQIMGTPTKEQMIRMNPHYTEV  276 (383)
T ss_dssp             CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTC--C
T ss_pred             cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHHHhCcccccc
Confidence            335789999999998865 589999999999999999999999986532211  1111110000 00       0     


Q ss_pred             ccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          390 RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+.......+...++...+..+.+||.+||+.||.+|||+.|++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH  322 (383)
T ss_dssp             CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000000111111222345779999999999999999999999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1e-44  Score=360.15  Aligned_cols=260  Identities=25%  Similarity=0.349  Sum_probs=197.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||.||+|.+..         +|..||||++.....   .....+.+|+.++++++||||+++++++.
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~  102 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLL---------DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI  102 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETT---------TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcC---------CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            579999999999999999999865         577999999976432   23356889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ..+..++||||+++|+|.+++..   ....+++..++.++.||+.||.|||+++   |+||||||+|||++         
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~---------  170 (310)
T 2wqm_A          103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFIT---------  170 (310)
T ss_dssp             ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC---------
T ss_pred             cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEc---------
Confidence            99999999999999999999863   3456899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      .++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       171 ----------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g  232 (310)
T 2wqm_A          171 ----------------ATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL  232 (310)
T ss_dssp             ----------------TTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ----------------CCCCEEEEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence                            477899999999987544322  12335789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      +.||....... ..+......     ..        .........+..+.+||.+||+.||.+||++.+|++.|+.+..
T Consensus       233 ~~p~~~~~~~~-~~~~~~~~~-----~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          233 QSPFYGDKMNL-YSLCKKIEQ-----CD--------YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             SCTTC---CCH-HHHHHHHHT-----TC--------SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCcccchhH-HHHHHHhhc-----cc--------CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            99997543221 111111100     00        0000011235678999999999999999999999999987643

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.6e-44  Score=367.30  Aligned_cols=268  Identities=17%  Similarity=0.137  Sum_probs=205.1

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC---CCCcceEee
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV---HLNLVKLIG  202 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---H~nIv~l~~  202 (511)
                      ...++|.+.++||+|+||+||+|.+....    ...+++.||||++....   ..++.+|+.++..++   |+||+++++
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLN----DAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-----------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCc----ccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            34578999999999999999999643211    11268899999997653   456788888888886   999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFR----RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ++...+..+||||||++|+|.+++..    ....+++..++.|+.||+.||+|||+++   ||||||||+||||+.....
T Consensus       135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTC
T ss_pred             eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccC
Confidence            99999999999999999999999964    3457999999999999999999999998   9999999999999841100


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                      ...              .-..++.+||+|||+|+..............+||+.|||||++.+..|+.++|||||||++||
T Consensus       212 ~~~--------------~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  277 (365)
T 3e7e_A          212 QDD--------------EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYC  277 (365)
T ss_dssp             C--------------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHH
T ss_pred             ccc--------------cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHH
Confidence            000              000267899999999976543233334455789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhc
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-LMSEVVEALK  437 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-s~~eil~~L~  437 (511)
                      |++|+.||.......               ......    +...   ...+.+.+++..||+.+|.+|+ ++.++.+.|+
T Consensus       278 lltg~~pf~~~~~~~---------------~~~~~~----~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~  335 (365)
T 3e7e_A          278 MLFGTYMKVKNEGGE---------------CKPEGL----FRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK  335 (365)
T ss_dssp             HHHSSCCCEEEETTE---------------EEECSC----CTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred             HHhCCCccccCCCCc---------------eeechh----cccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence            999999995432110               000011    1111   1256788999999999999995 7788877776


Q ss_pred             CC
Q 010432          438 PL  439 (511)
Q Consensus       438 ~l  439 (511)
                      .+
T Consensus       336 ~~  337 (365)
T 3e7e_A          336 KV  337 (365)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-45  Score=369.32  Aligned_cols=267  Identities=25%  Similarity=0.333  Sum_probs=200.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-----HHHHHHHHHHHhCCCCCCcceEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-----HKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-----~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      ..++|++.+.||+|+||.||+|++..         +|+.||||++.......     ...+.+|+.++++++||||++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   78 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKN---------TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL   78 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSS---------CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECC---------CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEE
Confidence            45789999999999999999998865         67899999997543221     23578999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++...+..++||||+++ +|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++        
T Consensus        79 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~--------  146 (346)
T 1ua2_A           79 DAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLD--------  146 (346)
T ss_dssp             EEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC--------
T ss_pred             EEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEc--------
Confidence            999999999999999965 899998776667899999999999999999999999   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~ell  360 (511)
                                       .++.+||+|||+++........  .....||+.|+|||++.+. .++.++|||||||++|||+
T Consensus       147 -----------------~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  207 (346)
T 1ua2_A          147 -----------------ENGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL  207 (346)
T ss_dssp             -----------------TTCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEEEecccceeccCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHH
Confidence                             4778999999999876543221  3346799999999998754 5899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhcc--cc---ccccccCC---ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGE--RR---RFYRLIDP---RLEGHFS-----IKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~---~~~~~~~-----~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      +|.+||.+......  +..... ....  ..   ......+.   ......+     ...+..+.+||.+||+.||.+||
T Consensus       208 ~g~~~~~~~~~~~~--~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  284 (346)
T 1ua2_A          208 LRVPFLPGDSDLDQ--LTRIFE-TLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI  284 (346)
T ss_dssp             HSSCSSCCSSHHHH--HHHHHH-HHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSC
T ss_pred             HCCCCCCCCCHHHH--HHHHHH-HcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCC
Confidence            99999976532211  111111 0000  00   00000000   0000001     12347899999999999999999


Q ss_pred             CHHHHHHHh
Q 010432          428 LMSEVVEAL  436 (511)
Q Consensus       428 s~~eil~~L  436 (511)
                      |+.|++++-
T Consensus       285 t~~ell~h~  293 (346)
T 1ua2_A          285 TATQALKMK  293 (346)
T ss_dssp             CHHHHHTSG
T ss_pred             CHHHHhcCh
Confidence            999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.5e-45  Score=367.13  Aligned_cols=267  Identities=26%  Similarity=0.399  Sum_probs=200.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++.+.||+|+||.||+|++..         +++.||||++.......  .+.+.+|+.++++++||||+++++++..
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   95 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKD---------TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK   95 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETT---------TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECC---------CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec
Confidence            579999999999999999999876         67899999997654332  3457899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++   |+||||||+|||++             
T Consensus        96 ~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~-------------  158 (331)
T 4aaa_A           96 KKRWYLVFEFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVS-------------  158 (331)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC-------------
T ss_pred             CCEEEEEEecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEc-------------
Confidence            9999999999998888877643 447999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+++.......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus       159 ------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (331)
T 4aaa_A          159 ------------QSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL  224 (331)
T ss_dssp             ------------TTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCcEEEEeCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCC
Confidence                        477899999999987544322  12345799999999998865 789999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhh--------hhccccccccccCCccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          366 MDKNRPNGEHNLVEWARP--------HLGERRRFYRLIDPRLEGHFS-----IKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |...........+.....        .+.....+.....+.+....+     ...+..+.+||.+||+.||.+|||+.++
T Consensus       225 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el  304 (331)
T 4aaa_A          225 FPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL  304 (331)
T ss_dssp             CCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred             CCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH
Confidence            976533211111000000        000000000111111111111     1235789999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       305 l~h  307 (331)
T 4aaa_A          305 LHH  307 (331)
T ss_dssp             GGS
T ss_pred             hcC
Confidence            874

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.4e-45  Score=361.35  Aligned_cols=259  Identities=27%  Similarity=0.370  Sum_probs=204.5

Q ss_pred             HhcCCCCCC-ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          127 ATRNFRPES-LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ..++|.+.+ .||+|+||.||+|.+...       .++..||||+++.....  ..+.+.+|+.+++.++||||++++++
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   86 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMK-------KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI   86 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECS-------SSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCC-------CceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            346788888 999999999999976431       25779999999765432  24578999999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      + ..+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++          
T Consensus        87 ~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~----------  151 (291)
T 1xbb_A           87 C-EAESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLV----------  151 (291)
T ss_dssp             E-ESSSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEE----------
T ss_pred             E-CCCCcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEe----------
Confidence            9 567789999999999999999764 46899999999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-  361 (511)
                                     .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++ 
T Consensus       152 ---------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  216 (291)
T 1xbb_A          152 ---------------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY  216 (291)
T ss_dssp             ---------------ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             ---------------CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhc
Confidence                           36789999999998765443321 1223457789999999998899999999999999999999 


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+.||......   .+.......              .....+...+..+.+||.+||+.||.+||++.+|++.|+.+
T Consensus       217 g~~p~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          217 GQKPYRGMKGS---EVTAMLEKG--------------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             TCCSSTTCCHH---HHHHHHHTT--------------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHH---HHHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99999764321   111111100              01111223357899999999999999999999999998754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=5.2e-45  Score=365.40  Aligned_cols=267  Identities=19%  Similarity=0.251  Sum_probs=209.6

Q ss_pred             ccChHHHHHHhcCCCCC-CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCC-C
Q 010432          118 KFTFNDLKLATRNFRPE-SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDL-V  193 (511)
Q Consensus       118 ~~~~~~~~~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l-~  193 (511)
                      .+.+.......+.|.+. +.||+|+||.||+|++..         +++.||||++.....  .....+.+|+.++..+ .
T Consensus        17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~   87 (327)
T 3lm5_A           17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKS---------TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKS   87 (327)
T ss_dssp             CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTT
T ss_pred             hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECC---------CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccC
Confidence            34555666777788887 889999999999999876         678999999976432  3356789999999999 5


Q ss_pred             CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEe
Q 010432          194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       194 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl  272 (511)
                      ||||+++++++...+..++|||||++|+|.+++... ...+++..++.++.||+.||+|||+++   |+||||||+|||+
T Consensus        88 ~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~  164 (327)
T 3lm5_A           88 CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILL  164 (327)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEE
Confidence            699999999999999999999999999999998543 356899999999999999999999998   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +...                      .++.+||+|||+++.......   .....||+.|+|||++.+..++.++|||||
T Consensus       165 ~~~~----------------------~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  219 (327)
T 3lm5_A          165 SSIY----------------------PLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNI  219 (327)
T ss_dssp             SCBT----------------------TBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred             ecCC----------------------CCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHH
Confidence            8421                      257899999999987654322   233579999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      ||++|||++|+.||........   ......   .        ............+..+.+||.+||+.||.+|||+.++
T Consensus       220 G~il~~ll~g~~pf~~~~~~~~---~~~i~~---~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~l  285 (327)
T 3lm5_A          220 GIIAYMLLTHTSPFVGEDNQET---YLNISQ---V--------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEIC  285 (327)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHH---HHHHHH---T--------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCchHH---HHHHHh---c--------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            9999999999999975432111   100000   0        0001111112235778999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       286 l~h  288 (327)
T 3lm5_A          286 LSH  288 (327)
T ss_dssp             TTC
T ss_pred             hCC
Confidence            875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.5e-44  Score=355.76  Aligned_cols=253  Identities=23%  Similarity=0.344  Sum_probs=200.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQ  209 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~  209 (511)
                      +|....+||+|+||.||+|++..         ++..||||++........+.+.+|+.+++.++||||+++++++...+.
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   93 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLS---------NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF   93 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETT---------TCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             CCCCcEEEeecCcEEEEEEEECC---------CCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc
Confidence            45556689999999999999865         677999999987665555778999999999999999999999999999


Q ss_pred             EEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          210 RLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      .++||||+++++|.+++....  ..+++..+..++.||+.||.|||+++   |+||||||+|||++.             
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~-------------  157 (295)
T 2clq_A           94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT-------------  157 (295)
T ss_dssp             EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEET-------------
T ss_pred             EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEEC-------------
Confidence            999999999999999997653  34678889999999999999999998   999999999999983             


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC--CCccccchhHHHHHHHHHhCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DIwSlGvil~elltg~~p  365 (511)
                                 .++.+||+|||+++.......  ......||+.|+|||++.+..  ++.++|||||||++|||++|+.|
T Consensus       158 -----------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (295)
T 2clq_A          158 -----------YSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP  224 (295)
T ss_dssp             -----------TTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCT
T ss_pred             -----------CCCCEEEeecccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                       267899999999987644221  123457999999999987643  88999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |........   ........        ...+    .++...+..+.+||.+||+.||.+||++.+++++
T Consensus       225 f~~~~~~~~---~~~~~~~~--------~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          225 FYELGEPQA---AMFKVGMF--------KVHP----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             TGGGSSHHH---HHHHHHHH--------CCCC----CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             ccCCCchhH---HHHhhccc--------cccc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            964321110   00000000        0111    1222335778999999999999999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=4.8e-45  Score=357.44  Aligned_cols=266  Identities=20%  Similarity=0.217  Sum_probs=201.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCC-CCCCcceEeeE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDL-VHLNLVKLIGY  203 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l-~H~nIv~l~~~  203 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||++......  ....+.+|+.++..+ +||||++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~   79 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRL---------DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSA   79 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcC---------CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeee
Confidence            34679999999999999999999875         5789999999865332  345688999999999 99999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.+.+..++||||+++|+|.+++...   ...+++..++.++.||+.||.|||+++   |+||||||+|||++..+....
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~  156 (289)
T 1x8b_A           80 WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNA  156 (289)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-------
T ss_pred             eecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcc
Confidence            99999999999999999999999653   256899999999999999999999998   999999999999985332111


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~el  359 (511)
                      .....      ...........+||+|||++.......      ...||+.|+|||++.+. .++.++|||||||++|||
T Consensus       157 ~~~~~------~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  224 (289)
T 1x8b_A          157 ASEEG------DEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCA  224 (289)
T ss_dssp             -------------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             ccccc------ccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHH
Confidence            00000      000000135579999999998765432      23589999999999765 667899999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ++|.+++....     .......           ...+.+.    ...+..+.+||.+||+.||.+|||+.+++++-
T Consensus       225 ~~~~~~~~~~~-----~~~~~~~-----------~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  281 (289)
T 1x8b_A          225 AGAEPLPRNGD-----QWHEIRQ-----------GRLPRIP----QVLSQEFTELLKVMIHPDPERRPSAMALVKHS  281 (289)
T ss_dssp             TTCCCCCSSSH-----HHHHHHT-----------TCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred             hcCCCCCcchh-----HHHHHHc-----------CCCCCCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence            99998764321     1111100           0001111    12346789999999999999999999999753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.6e-45  Score=361.36  Aligned_cols=253  Identities=30%  Similarity=0.474  Sum_probs=194.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++.+.||+|+||.||+|++.           ++.||||++....  ..+.+.+|+.+|++++||||+++++++.  +
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-----------~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~   72 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-----------AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--N   72 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-----------TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--T
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-----------CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--C
Confidence            57889999999999999999873           5689999997542  3467899999999999999999999876  4


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ..++||||+++|+|.+++.....  .+++..++.++.||+.||+|||+.+..+|+||||||+|||++.            
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~------------  140 (307)
T 2eva_A           73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA------------  140 (307)
T ss_dssp             TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET------------
T ss_pred             CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC------------
Confidence            47999999999999999975432  4788999999999999999999932223999999999999983            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +...+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       141 ------------~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~  203 (307)
T 2eva_A          141 ------------GGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF  203 (307)
T ss_dssp             ------------TTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTT
T ss_pred             ------------CCCEEEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence                        2234899999999865432     22346999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ......... .. +... .        ...+.+.    ...+..+.+|+.+||+.||.+|||+.+|++.|+.+.
T Consensus       204 ~~~~~~~~~-~~-~~~~-~--------~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          204 DEIGGPAFR-IM-WAVH-N--------GTRPPLI----KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             TTTCSSHHH-HH-HHHH-T--------TCCCCCB----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             hhhCccHHH-HH-HHHh-c--------CCCCCcc----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            754322111 10 1000 0        0011111    123467899999999999999999999999997654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.1e-45  Score=394.30  Aligned_cols=260  Identities=26%  Similarity=0.398  Sum_probs=210.5

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       124 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      +.+..++|++.++||+|+||.||+|.+..          +..||||+++.... ..+.|.+|+.+|++|+|+|||+++++
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~  330 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNG----------TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV  330 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETT----------TEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECC----------CceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34456788999999999999999999863          45799999986543 35679999999999999999999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      +.+ +..+||||||.+|+|.++|... ...+++..++.|+.||+.||+|||+++   ||||||||+||||+         
T Consensus       331 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~---------  397 (535)
T 2h8h_A          331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVG---------  397 (535)
T ss_dssp             ECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC---------
T ss_pred             Eee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEc---------
Confidence            865 6789999999999999999643 346899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-  361 (511)
                                      +++.+||+|||+++....... .......+|..|+|||++.+..++.++|||||||+||||++ 
T Consensus       398 ----------------~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~  460 (535)
T 2h8h_A          398 ----------------ENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK  460 (535)
T ss_dssp             ----------------GGGCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             ----------------CCCcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence                            467899999999987653211 11223457889999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |+.||.+....   .+...+..    .          .....+..++..+.+||.+||+.||++|||+.+|++.|+.+..
T Consensus       461 g~~P~~~~~~~---~~~~~i~~----~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          461 GRVPYPGMVNR---EVLDQVER----G----------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             TCCSSTTCCHH---HHHHHHHT----T----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCCCCCCCHH---HHHHHHHc----C----------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            99999754321   11111110    0          0111122345788999999999999999999999999988754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.4e-45  Score=360.48  Aligned_cols=259  Identities=27%  Similarity=0.436  Sum_probs=207.8

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      ++.+..++|++.+.||+|+||.||+|.+.          .+..||||++..... ..+.+.+|+.+|++++||||+++++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~----------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~   75 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYN----------GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYA   75 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET----------TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEc----------CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEE
Confidence            33445678999999999999999999875          356899999976543 3567899999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      ++. .+..++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++   |+||||||+|||++        
T Consensus        76 ~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~--------  143 (279)
T 1qpc_A           76 VVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVS--------  143 (279)
T ss_dssp             EEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------
T ss_pred             EEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEc--------
Confidence            876 456899999999999999986432 26899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       +++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       144 -----------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  205 (279)
T 1qpc_A          144 -----------------DTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT  205 (279)
T ss_dssp             -----------------TTSCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             -----------------CCCCEEECCCcccccccCcccc-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHh
Confidence                             4778999999999876543221 1223457889999999998899999999999999999999


Q ss_pred             -CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 -GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                       |+.||......   .........              .....+...+..+.+|+.+||+.||.+|||+.+|++.|+.+
T Consensus       206 ~g~~p~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          206 HGRIPYPGMTNP---EVIQNLERG--------------YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             TTCCSSTTCCHH---HHHHHHHTT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcccCHH---HHHHHHhcc--------------cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence             99999754321   111111100              00111122357889999999999999999999999998754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=9.4e-45  Score=355.29  Aligned_cols=257  Identities=23%  Similarity=0.329  Sum_probs=203.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||+++.....      ..+.+.+|+.+|++++||||++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   74 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKG---------TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLH   74 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcC---------CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehh
Confidence            3578999999999999999999875         6789999999765322      356789999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++...+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++..+.    
T Consensus        75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~----  146 (283)
T 3bhy_A           75 DIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNV----  146 (283)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSS----
T ss_pred             heecCCCeEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCC----
Confidence            9999999999999999999999999653 46899999999999999999999998   999999999999984211    


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ....+||+|||++........   .....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       147 -----------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  206 (283)
T 3bhy_A          147 -----------------PNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  206 (283)
T ss_dssp             -----------------SSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCceEEEecccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHH
Confidence                             134799999999987654322   233579999999999998999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..||......   ........   ....        .........+..+.+|+.+||+.||.+||++.+++++
T Consensus       207 g~~p~~~~~~~---~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          207 GASPFLGETKQ---ETLTNISA---VNYD--------FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             SSCTTCCSSHH---HHHHHHHT---TCCC--------CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             CCCCCCCcchH---HHHHHhHh---cccC--------CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence            99999754321   11111000   0000        0000001124678999999999999999999999974

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.7e-45  Score=363.86  Aligned_cols=275  Identities=24%  Similarity=0.350  Sum_probs=210.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++++.||+|+||.||+|++...     ...+++.||||++........+.+.+|+.+|++++||||+++++++...
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPL-----QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTT-----SSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccc-----cCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            35788999999999999999986421     1236889999999876555556789999999999999999999998764


Q ss_pred             C--eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 D--QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 ~--~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +  ..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~------------  179 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVE------------  179 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEE------------
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEc------------
Confidence            3  789999999999999999877667999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .++.+||+|||+++......... ......||..|+|||++.+..++.++|||||||++|||++|..
T Consensus       180 -------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~  246 (326)
T 2w1i_A          180 -------------NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  246 (326)
T ss_dssp             -------------ETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             -------------CCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCC
Confidence                         37789999999998765543221 1223467888999999998899999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhcc---ccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGE---RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||.....    ............   ...+...+........+..++..+.+||.+||+.||.+||++.+|++.|+.+
T Consensus       247 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          247 KSKSPPA----EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             GGGSHHH----HHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCHH----HHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            8853210    000000000000   0000011111111112233457899999999999999999999999998754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=6.4e-45  Score=377.23  Aligned_cols=262  Identities=26%  Similarity=0.356  Sum_probs=196.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC-
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED-  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~-  207 (511)
                      .+|++.++||+|+||.||+|++..         +|+.||||++.....    .+.+|+++|++|+|||||++++++... 
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~---------~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~  120 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSG  120 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECC---------CCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccC
Confidence            468889999999999999999875         678999999975432    234799999999999999999988642 


Q ss_pred             -----CeEEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          208 -----DQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       208 -----~~~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                           ..++|||||+++ +|.+++.   .....+++..++.++.||+.||.|||+++   |+||||||+||||+.     
T Consensus       121 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~-----  191 (420)
T 1j1b_A          121 EKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDP-----  191 (420)
T ss_dssp             TTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEET-----
T ss_pred             CCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeC-----
Confidence                 236799999965 6766654   34567999999999999999999999998   999999999999984     


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~e  358 (511)
                                         +...+||+|||+++.......   .....||+.|+|||++.+. .|+.++|||||||||||
T Consensus       192 -------------------~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  249 (420)
T 1j1b_A          192 -------------------DTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE  249 (420)
T ss_dssp             -------------------TTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             -------------------CCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHH
Confidence                               245689999999987644332   2335789999999998765 79999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhh-------hcc-ccccccccCCccCC-----CCCHHHHHHHHHHHHHhcccCCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPH-------LGE-RRRFYRLIDPRLEG-----HFSIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      |++|+.||.+....  ..+.......       +.. ...+....-+.+..     .+....+.++.+||.+||+.||.+
T Consensus       250 ll~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~  327 (420)
T 1j1b_A          250 LLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA  327 (420)
T ss_dssp             HHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             HHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhH
Confidence            99999999865322  1121111100       000 00000000011100     012223578999999999999999


Q ss_pred             CCCHHHHHHHh
Q 010432          426 RPLMSEVVEAL  436 (511)
Q Consensus       426 RPs~~eil~~L  436 (511)
                      ||++.|++++-
T Consensus       328 R~t~~e~l~hp  338 (420)
T 1j1b_A          328 RLTPLEACAHS  338 (420)
T ss_dssp             SCCHHHHHTSG
T ss_pred             CCCHHHHhCCH
Confidence            99999999753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=8.6e-45  Score=396.79  Aligned_cols=252  Identities=25%  Similarity=0.327  Sum_probs=206.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      ...++|+++++||+|+||.||+|+++.         +++.||||+++...   ....+.+..|..+|..+ +|+||++++
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~---------~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~  408 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKG---------TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH  408 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESS---------SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECC---------CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence            345789999999999999999999876         67899999997532   12335678999999988 799999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++.+.+.+||||||+++|+|.+++... ..+++..++.|+.||+.||+|||+++   ||||||||+||||+        
T Consensus       409 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~--------  476 (674)
T 3pfq_A          409 SCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLD--------  476 (674)
T ss_dssp             EECBCSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEEC--------
T ss_pred             EEEEeCCEEEEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEc--------
Confidence            9999999999999999999999999754 46999999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||+|+.......  .....+||+.|||||++.+..|+.++||||||||||||++
T Consensus       477 -----------------~~g~ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyellt  537 (674)
T 3pfq_A          477 -----------------SEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA  537 (674)
T ss_dssp             -----------------SSSCEEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCcEEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHc
Confidence                             478899999999986433222  2345789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~-----~eil~~  435 (511)
                      |+.||.+....   .+...+   ....            ..++...+.++.+||.+||+.||.+||++     .+|+++
T Consensus       538 G~~Pf~~~~~~---~~~~~i---~~~~------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          538 GQAPFEGEDED---ELFQSI---MEHN------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             SSCSSCCSSHH---HHHHHH---HSSC------------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             CCCCCCCCCHH---HHHHHH---HhCC------------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence            99999764321   111111   1110            11222345789999999999999999997     666653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4e-45  Score=385.86  Aligned_cols=255  Identities=25%  Similarity=0.367  Sum_probs=206.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.++||+|+||.||+|++..         +++.||||++.....   .....+.+|+.+|++++|||||++++++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   95 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKI---------TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF   95 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECC---------CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            4579999999999999999999875         678999999976532   3456789999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++|||||.+|+|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++...        
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~--------  163 (484)
T 3nyv_A           96 EDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKS--------  163 (484)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSS--------
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCC--------
Confidence            9999999999999999999998654 46999999999999999999999998   99999999999996321        


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++.......   ....+||+.|+|||++.+ .|+.++|||||||++|+|++|..
T Consensus       164 --------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~  225 (484)
T 3nyv_A          164 --------------KDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCP  225 (484)
T ss_dssp             --------------TTCCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCcEEEEeeeeeEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCC
Confidence                          367899999999987654332   234579999999998865 79999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   .+...+..   ....        .........+..+.+||.+||+.||.+|||+.+++++
T Consensus       226 pf~~~~~~---~~~~~i~~---~~~~--------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          226 PFNGANEY---DILKKVEK---GKYT--------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             SSCCSSHH---HHHHHHHH---CCCC--------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCHH---HHHHHHHc---CCCC--------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            99764321   11111110   0000        0000111235778999999999999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.3e-45  Score=369.78  Aligned_cols=262  Identities=23%  Similarity=0.315  Sum_probs=196.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++++.||+|+||.||+|.+..         +|+.||||++......  ..+.+.+|+.+|+.++||||+++++++.
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~   94 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGR---------TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFT   94 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETT---------TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECC---------CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEe
Confidence            3679999999999999999999865         6889999999654322  2356889999999999999999999997


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ...      ..|+||||+ +++|.+++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++      
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~------  162 (367)
T 1cm8_A           95 PDETLDDFTDFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVN------  162 (367)
T ss_dssp             SCSSTTTCCCCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC------
T ss_pred             cCCccccCceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEc------
Confidence            653      469999999 8899999865  46899999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+++.....     .+..+||+.|+|||++.+ ..++.++||||||||+||
T Consensus       163 -------------------~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  218 (367)
T 1cm8_A          163 -------------------EDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  218 (367)
T ss_dssp             -------------------TTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             -------------------CCCCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHH
Confidence                               4778999999999875432     234578999999999887 689999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhc--------c--cccccc----ccCCccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLG--------E--RRRFYR----LIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~----~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      |++|+.||.+.........+........        .  ...+..    .....+. ......+..+.+||.+||+.||.
T Consensus       219 ll~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~  297 (367)
T 1cm8_A          219 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAE  297 (367)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChh
Confidence            9999999986532211111100000000        0  000000    0000000 11122357889999999999999


Q ss_pred             CCCCHHHHHHH
Q 010432          425 ARPLMSEVVEA  435 (511)
Q Consensus       425 ~RPs~~eil~~  435 (511)
                      +|||+.+++++
T Consensus       298 ~R~t~~e~l~h  308 (367)
T 1cm8_A          298 QRVTAGEALAH  308 (367)
T ss_dssp             TSCCHHHHHHS
T ss_pred             HCCCHHHHhcC
Confidence            99999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.6e-45  Score=358.12  Aligned_cols=249  Identities=28%  Similarity=0.423  Sum_probs=204.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ...+|++.+.||+|+||.||+|++..         +++.||||++....    ..+.+|+.++++++||||+++++++..
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~   75 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRI---------DGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDG   75 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETT---------TCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hccccceeeeeccCCceEEEEEEEcC---------CCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEec
Confidence            45679999999999999999999875         57799999998654    356789999999999999999998864


Q ss_pred             ----------------CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          207 ----------------DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       207 ----------------~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                                      ....++||||+++|+|.+++... ...+++..++.++.||+.||.|||+++   |+||||||+|
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~N  152 (284)
T 2a19_B           76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSN  152 (284)
T ss_dssp             EEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGG
T ss_pred             cccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHH
Confidence                            34579999999999999999753 357899999999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         +++.+||+|||++........   .....||+.|+|||++.+..++.++||
T Consensus       153 il~~-------------------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di  204 (284)
T 2a19_B          153 IFLV-------------------------DTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDL  204 (284)
T ss_dssp             EEEE-------------------------ETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHH
T ss_pred             EEEc-------------------------CCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhh
Confidence            9998                         477899999999987654322   233569999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      |||||++|||++|..||...     .....             .+....+...    .+..+.+||.+||+.||.+||++
T Consensus       205 ~slG~il~~l~~~~~~~~~~-----~~~~~-------------~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~  262 (284)
T 2a19_B          205 YALGLILAELLHVCDTAFET-----SKFFT-------------DLRDGIISDI----FDKKEKTLLQKLLSKKPEDRPNT  262 (284)
T ss_dssp             HHHHHHHHHHHSCCSSHHHH-----HHHHH-------------HHHTTCCCTT----SCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHHHHHhcCCcchhH-----HHHHH-------------Hhhccccccc----CCHHHHHHHHHHccCChhhCcCH
Confidence            99999999999999887421     00000             0011111112    24678899999999999999999


Q ss_pred             HHHHHHhcCCCC
Q 010432          430 SEVVEALKPLPN  441 (511)
Q Consensus       430 ~eil~~L~~l~~  441 (511)
                      .+++++|+.+..
T Consensus       263 ~e~l~~l~~~~~  274 (284)
T 2a19_B          263 SEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhh
Confidence            999999987654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=3e-44  Score=357.20  Aligned_cols=253  Identities=25%  Similarity=0.369  Sum_probs=202.3

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|.+..         +|+.||||++....  ....+.+|+.++++++||||+++++++..
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKE---------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK   95 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETT---------TCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECC---------CCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            45689999999999999999999865         67899999997653  23678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++||||+++|+|.+++......+++..++.++.||+.||.|||+++   |+|+||||+|||++             
T Consensus        96 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~-------------  159 (314)
T 3com_A           96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLN-------------  159 (314)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC-------------
T ss_pred             CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEEC-------------
Confidence            99999999999999999999755668999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  .++.+||+|||++........  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       160 ------------~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  225 (314)
T 3com_A          160 ------------TEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY  225 (314)
T ss_dssp             ------------TTCCEEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------------CCCCEEEeecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence                        477899999999987544321  123457999999999999989999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......   ........   .       ..+.  ...+...+..+.+||.+||+.||.+||++.+++++
T Consensus       226 ~~~~~~---~~~~~~~~---~-------~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          226 ADIHPM---RAIFMIPT---N-------PPPT--FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             TTSCHH---HHHHHHHH---S-------CCCC--CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CCCChH---HHHHHHhc---C-------CCcc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            754321   11000000   0       0000  01112235678999999999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.3e-44  Score=360.59  Aligned_cols=260  Identities=21%  Similarity=0.276  Sum_probs=201.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||+++...   .+.+.+|+.+|+++. ||||+++++++..
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~  102 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINIT---------NNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKD  102 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             CCceEEEEEecccCCeEEEEEEECC---------CCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeecc
Confidence            3679999999999999999999876         67799999997543   467889999999997 9999999999988


Q ss_pred             --CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          207 --DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       207 --~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                        ....++||||+.+++|.+++.    .+++..+..++.||+.||+|||+++   |+||||||+|||++.          
T Consensus       103 ~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~----------  165 (330)
T 3nsz_A          103 PVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDH----------  165 (330)
T ss_dssp             TTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEET----------
T ss_pred             CCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcC----------
Confidence              667899999999999999884    4889999999999999999999998   999999999999984          


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~  363 (511)
                                    +...+||+|||+++.......   .....||..|+|||++.+ ..++.++|||||||++|||++|+
T Consensus       166 --------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  228 (330)
T 3nsz_A          166 --------------EHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  228 (330)
T ss_dssp             --------------TTTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             --------------CCCEEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCC
Confidence                          234799999999987654332   233578999999999876 67899999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhcc--------------cccccccc--------CCccCCCCCHHHHHHHHHHHHHhccc
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGE--------------RRRFYRLI--------DPRLEGHFSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~Li~~cl~~  421 (511)
                      .||........ .+..... ....              ...+....        ............+..+.+||.+||+.
T Consensus       229 ~p~~~~~~~~~-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  306 (330)
T 3nsz_A          229 EPFFHGHDNYD-QLVRIAK-VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY  306 (330)
T ss_dssp             SSSSCCSSHHH-HHHHHHH-HHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCS
T ss_pred             CCcccCCchHH-HHHHHHH-hcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcC
Confidence            99965432211 1111000 0000              00000000        00001111122357899999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 010432          422 DPKARPLMSEVVEA  435 (511)
Q Consensus       422 dP~~RPs~~eil~~  435 (511)
                      ||.+|||+.+++++
T Consensus       307 dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          307 DHQSRLTAREAMEH  320 (330)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999999975

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.2e-45  Score=372.81  Aligned_cols=266  Identities=24%  Similarity=0.335  Sum_probs=204.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         ++..||+|++...... ....+.+|+.+|++++||||+++++++..
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  102 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKP---------SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS  102 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECC---------CCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence            4689999999999999999999875         6789999999865332 23568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++..+||||||++|+|.+++... ..+++..+..++.||+.||.|||+. +   |+||||||+|||++            
T Consensus       103 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~------------  166 (360)
T 3eqc_A          103 DGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVN------------  166 (360)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEEC------------
T ss_pred             CCEEEEEEECCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEEC------------
Confidence            99999999999999999999654 3689999999999999999999985 7   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||++......    ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       167 -------------~~~~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  229 (360)
T 3eqc_A          167 -------------SRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP  229 (360)
T ss_dssp             -------------TTCCEEECCCCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCC
T ss_pred             -------------CCCCEEEEECCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                         4778999999999754221    12335799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhh-hh---------------------cccccc----ccccCCccCCCCCHHHHHHHHHHHHHhc
Q 010432          366 MDKNRPNGEHNLVEWARP-HL---------------------GERRRF----YRLIDPRLEGHFSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~-~~---------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Li~~cl  419 (511)
                      |................. ..                     ......    ..+.............+..+.+||.+||
T Consensus       230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  309 (360)
T 3eqc_A          230 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL  309 (360)
T ss_dssp             SSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHh
Confidence            975432111100000000 00                     000000    0000000000111123567899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 010432          420 SRDPKARPLMSEVVEA  435 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~  435 (511)
                      +.||.+|||+.+++++
T Consensus       310 ~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          310 IKNPAERADLKQLMVH  325 (360)
T ss_dssp             CSSTTTSCCHHHHHTS
T ss_pred             hcChhhCCCHHHHhhC
Confidence            9999999999999974

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.1e-44  Score=384.40  Aligned_cols=257  Identities=24%  Similarity=0.318  Sum_probs=203.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-------------ccHHHHHHHHHHHhCCC
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-------------QGHKEWLAEVNFLGDLV  193 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-------------~~~~~~~~E~~il~~l~  193 (511)
                      ..++|+++++||+|+||+||+|++..         ++..||||++.....             ...+.+.+|+.+|++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  104 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKN---------GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD  104 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETT---------TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC
T ss_pred             cccceEEEeEecccCCeEEEEEEECC---------CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC
Confidence            35689999999999999999999876         678999999976432             22456889999999999


Q ss_pred             CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       194 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      |||||++++++.+....+||||||++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++
T Consensus       105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~  180 (504)
T 3q5i_A          105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLE  180 (504)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEES
T ss_pred             CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEe
Confidence            999999999999999999999999999999998654 46999999999999999999999998   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                      ..+                      ....+||+|||+++.......   ....+||+.|+|||++. ..|+.++||||||
T Consensus       181 ~~~----------------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG  234 (504)
T 3q5i_A          181 NKN----------------------SLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCG  234 (504)
T ss_dssp             STT----------------------CCSSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHH
T ss_pred             cCC----------------------CCccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHH
Confidence            421                      134699999999987654322   23457999999999876 5699999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      |++|+|++|..||.+....   .+...+..   ....+    +....    ...+..+.+||.+||+.||.+|||+.+++
T Consensus       235 ~il~~ll~g~~pf~~~~~~---~~~~~i~~---~~~~~----~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l  300 (504)
T 3q5i_A          235 VIMYILLCGYPPFGGQNDQ---DIIKKVEK---GKYYF----DFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEAL  300 (504)
T ss_dssp             HHHHHHHHSSCSSCCSSHH---HHHHHHHH---CCCCC----CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCHH---HHHHHHHc---CCCCC----Ccccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence            9999999999999764321   11111110   00000    00000    11246789999999999999999999999


Q ss_pred             HHh
Q 010432          434 EAL  436 (511)
Q Consensus       434 ~~L  436 (511)
                      ++-
T Consensus       301 ~h~  303 (504)
T 3q5i_A          301 NSR  303 (504)
T ss_dssp             TSH
T ss_pred             cCH
Confidence            753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.5e-44  Score=353.81  Aligned_cols=252  Identities=25%  Similarity=0.370  Sum_probs=200.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..|.+.+.||+|+||.||+|.+..         ++..||+|++......  ....+.+|+.+|++++||||+++++++..
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   96 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTE---------TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWES   96 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecC---------CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecc
Confidence            347788899999999999998875         6779999999754332  33568899999999999999999999875


Q ss_pred             ----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          207 ----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       207 ----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                          ....++||||+++|+|.+++... ..+++..++.++.||+.||.|||+++ .+|+||||||+|||++.        
T Consensus        97 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~--------  166 (290)
T 1t4h_A           97 TVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITG--------  166 (290)
T ss_dssp             ESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESS--------
T ss_pred             ccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEEC--------
Confidence                45689999999999999999654 46899999999999999999999876 45999999999999973        


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                      +++.+||+|||++.......    .....||+.|+|||++. ..++.++|||||||++|+|++|
T Consensus       167 ----------------~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g  225 (290)
T 1t4h_A          167 ----------------PTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             ----------------TTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ----------------CCCCEEEeeCCCcccccccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhC
Confidence                            36789999999998654432    23457999999999876 5699999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||......  ..........    .         ....++...++.+.+||.+||+.||.+|||+.+|+++
T Consensus       226 ~~pf~~~~~~--~~~~~~~~~~----~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          226 EYPYSECQNA--AQIYRRVTSG----V---------KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             SCTTTTCSSH--HHHHHHHTTT----C---------CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCcCcH--HHHHHHHhcc----C---------CccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            9999754321  1111111100    0         0001111123678999999999999999999999974

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.1e-44  Score=355.25  Aligned_cols=260  Identities=23%  Similarity=0.255  Sum_probs=199.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++.......   .+.+.+|+.++++++||||+++++++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~  103 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTV---------RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG  103 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETT---------TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcC---------CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence            4689999999999999999999865         57899999997653322   35688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..++..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus       104 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~-----------  168 (309)
T 2h34_A          104 EIDGQLYVDMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVS-----------  168 (309)
T ss_dssp             EETTEEEEEEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-----------
T ss_pred             eeCCeEEEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEc-----------
Confidence            9999999999999999999999654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       169 --------------~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  233 (309)
T 2h34_A          169 --------------ADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSP  233 (309)
T ss_dssp             --------------TTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCC
Confidence                          4678999999999876543221 1234579999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhcCCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-LMSEVVEALKPLPN  441 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-s~~eil~~L~~l~~  441 (511)
                      ||......   .+...    .......        ........+..+.+||.+||+.||.+|| ++.++++.|+.+..
T Consensus       234 pf~~~~~~---~~~~~----~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          234 PYQGDQLS---VMGAH----INQAIPR--------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             SSCSCHHH---HHHHH----HHSCCCC--------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             CCCCchHH---HHHHH----hccCCCC--------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence            99754211   11111    1000000        0011122346789999999999999999 99999999986543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.8e-44  Score=357.18  Aligned_cols=250  Identities=26%  Similarity=0.404  Sum_probs=206.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +.|++.+.||+|+||.||+|++..         +++.||||++..... ...+.+.+|+.++++++||||+++++++...
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   92 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNR---------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD   92 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHHHHhhhhcccCCeEEEEEEECC---------CCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence            568899999999999999998865         678999999976543 3456789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||+++++|.+++..  ..+++..++.++.||+.||.|||+++   |+||||||+|||++              
T Consensus        93 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~--------------  153 (303)
T 3a7i_A           93 TKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLS--------------  153 (303)
T ss_dssp             TEEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC--------------
T ss_pred             CeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEEC--------------
Confidence            999999999999999999854  46899999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||++........  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       154 -----------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  220 (303)
T 3a7i_A          154 -----------EHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS  220 (303)
T ss_dssp             -----------TTSCEEECCCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -----------CCCCEEEeecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCC
Confidence                       477899999999987644321  1234579999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      .....   ........          ...+.+..    ..+..+.+||.+||+.||.+|||+.+|+++.
T Consensus       221 ~~~~~---~~~~~~~~----------~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          221 ELHPM---KVLFLIPK----------NNPPTLEG----NYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             TSCHH---HHHHHHHH----------SCCCCCCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             CcCHH---HHHHHhhc----------CCCCCCcc----ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence            54221   11111100          01111122    2246789999999999999999999998754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-45  Score=370.08  Aligned_cols=260  Identities=27%  Similarity=0.337  Sum_probs=204.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCC-CCCCcceEee
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDL-VHLNLVKLIG  202 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l-~H~nIv~l~~  202 (511)
                      .++|++.++||+|+||.||+|++....      .+++.||||+++....    ...+.+.+|+.+|.++ +||||+++++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  126 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGH------DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY  126 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSST------TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccC------CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEE
Confidence            357999999999999999999985321      2688999999975421    2234567899999999 7999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++...+..+||||||++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+||||+         
T Consensus       127 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~---------  193 (355)
T 1vzo_A          127 AFQTETKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLD---------  193 (355)
T ss_dssp             EEEETTEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC---------
T ss_pred             EEeeCceEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEC---------
Confidence            999999999999999999999999654 36899999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc--CCCCccccchhHHHHHHHHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil~ell  360 (511)
                                      .++.+||+|||+++........ .....+||+.|+|||++.+  ..++.++|||||||+||||+
T Consensus       194 ----------------~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell  256 (355)
T 1vzo_A          194 ----------------SNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL  256 (355)
T ss_dssp             ----------------TTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHH
T ss_pred             ----------------CCCcEEEeeCCCCeecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHH
Confidence                            4778999999999865432221 2234679999999999985  35789999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      +|+.||...........  ........        .+    .++...+..+.+||.+||+.||.+||     ++.+++++
T Consensus       257 ~g~~pf~~~~~~~~~~~--~~~~~~~~--------~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          257 TGASPFTVDGEKNSQAE--ISRRILKS--------EP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HSSCTTSCTTSCCCHHH--HHHHHHHC--------CC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HCCCCCccCCccchHHH--HHHHHhcc--------CC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            99999975443222111  11111100        01    11222356789999999999999999     99999886


Q ss_pred             hc
Q 010432          436 LK  437 (511)
Q Consensus       436 L~  437 (511)
                      ..
T Consensus       323 ~~  324 (355)
T 1vzo_A          323 LF  324 (355)
T ss_dssp             GG
T ss_pred             cc
Confidence            53

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.3e-44  Score=363.67  Aligned_cols=250  Identities=26%  Similarity=0.348  Sum_probs=205.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|.+.+.||+|+||.||+|++..         +++.||+|++.....   ...+.+.+|+.+++.++|+||+++++++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  110 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDAD---------TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF  110 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4679999999999999999999876         677999999975432   2345688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+.+..++|||||.+++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-----------  175 (335)
T 2owb_A          111 EDNDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLN-----------  175 (335)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC-----------
T ss_pred             ecCCeEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEc-----------
Confidence            9999999999999999999988654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++........  .....||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       176 --------------~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  239 (335)
T 2owb_A          176 --------------EDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP  239 (335)
T ss_dssp             --------------TTCCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeeccCceecccCccc--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcC
Confidence                          4778999999999876433221  234579999999999999899999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   ......   ....        ..+    +...+..+.+||.+||+.||.+||++.+++++
T Consensus       240 pf~~~~~~---~~~~~~---~~~~--------~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          240 PFETSCLK---ETYLRI---KKNE--------YSI----PKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             TTCCSSHH---HHHHHH---HHTC--------CCC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCCCCCHH---HHHHHH---hcCC--------CCC----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            99754211   111000   0000        011    11224678899999999999999999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=5.7e-44  Score=375.11  Aligned_cols=265  Identities=22%  Similarity=0.245  Sum_probs=209.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC-CCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH-LNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H-~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||.||+|++..         +++.||||++......  ..+.+|+.+++.|.| ++|+.+..++..
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~---------~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~   74 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQ---------TNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVE   74 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETT---------TCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECC---------CCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            4689999999999999999999865         6789999998765432  357899999999977 556667777778


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..+|||||| +++|.+++......+++..++.|+.||+.||.|||+++   ||||||||+||||+...          
T Consensus        75 ~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~----------  140 (483)
T 3sv0_A           75 GDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGR----------  140 (483)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGG----------
T ss_pred             CCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCC----------
Confidence            88999999999 99999999866678999999999999999999999998   99999999999995211          


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                  .++.+||+|||+++........     .......||+.|+|||++.+..++.++||||||||||||++
T Consensus       141 ------------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ellt  208 (483)
T 3sv0_A          141 ------------RANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR  208 (483)
T ss_dssp             ------------GTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence                        3778999999999876543321     11224679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+.||..................... .....+     ..    .++.++.+||..||+.||.+||++.+|++.|+.+
T Consensus       209 G~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~~l-----~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          209 GSLPWQGLKAGTKKQKYEKISEKKVA-TSIEAL-----CR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             SSCTTSSCCCSSHHHHHHHHHHHHHH-SCHHHH-----HT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CCCCCccccchhHHHHHHHHhhcccc-ccHHHH-----hc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            99999876554333322221111000 000000     01    1246789999999999999999999999988765

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.2e-45  Score=377.44  Aligned_cols=242  Identities=18%  Similarity=0.203  Sum_probs=189.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHH---HHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEV---NFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~---~il~~l~H~nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|++..         +|+.||||++....   ....+.+.+|+   .+|++++|||||+++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~  142 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQE---------TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH  142 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-C---------CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECC---------CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHH
Confidence            4678999999999999999999765         67899999997542   23346788999   556666899999998


Q ss_pred             -------eEEEeCC-----------------eEEEEEEccCCCCHHHHHhhCCC------CCCHHHHHHHHHHHHHHHHH
Q 010432          202 -------GYCIEDD-----------------QRLLVYEFMPRGSLENHLFRRSL------PLPWSIRMKIALGAAKGLAF  251 (511)
Q Consensus       202 -------~~~~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~~------~l~~~~~~~i~~qi~~gL~y  251 (511)
                             +++...+                 ..||||||| +|+|.+++.....      .+++..++.|+.||+.||+|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~  221 (377)
T 3byv_A          143 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLAS  221 (377)
T ss_dssp             HCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHH
Confidence                   6666543                 278999999 6899999975321      23357888899999999999


Q ss_pred             HhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeecccccc
Q 010432          252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG  331 (511)
Q Consensus       252 LH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~  331 (511)
                      ||+++   ||||||||+||||+                         .++.+||+|||+++....     .....+| +.
T Consensus       222 LH~~~---ivHrDikp~NIll~-------------------------~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~  267 (377)
T 3byv_A          222 LHHYG---LVHTYLRPVDIVLD-------------------------QRGGVFLTGFEHLVRDGA-----RVVSSVS-RG  267 (377)
T ss_dssp             HHHTT---EECSCCCGGGEEEC-------------------------TTCCEEECCGGGCEETTC-----EEECCCC-TT
T ss_pred             HHhCC---eecCCCCHHHEEEc-------------------------CCCCEEEEechhheecCC-----cccCCCC-cC
Confidence            99998   99999999999998                         477899999999986433     2344678 99


Q ss_pred             ccCCcccccC-----------CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccC
Q 010432          332 YAAPEYVMTG-----------HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE  400 (511)
Q Consensus       332 y~aPE~~~~~-----------~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (511)
                      |+|||++.+.           .|+.++|||||||+||||++|+.||..........                .+...  .
T Consensus       268 y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~----------------~~~~~--~  329 (377)
T 3byv_A          268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE----------------WIFRS--C  329 (377)
T ss_dssp             CCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG----------------GGGSS--C
T ss_pred             ccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh----------------hhhhh--c
Confidence            9999999877           89999999999999999999999997543221110                00000  0


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          401 GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       401 ~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .    ..+..+.+||.+||+.||.+||++.+++++
T Consensus       330 ~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          330 K----NIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             C----CCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             c----CCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            1    124678999999999999999999999873

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=4.1e-45  Score=361.27  Aligned_cols=255  Identities=24%  Similarity=0.392  Sum_probs=201.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..++|++.+.||+|+||.||+|++..         ++..||+|++..........+.+|+.+++.++||||+++++++..
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~---------~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH   87 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETT---------TCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CccceeecceeccCCCeEEEEEEEcC---------CCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee
Confidence            34689999999999999999999875         677999999987666666789999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++|||||++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++             
T Consensus        88 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~-------------  151 (302)
T 2j7t_A           88 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMT-------------  151 (302)
T ss_dssp             C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEC-------------
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEC-------------
Confidence            99999999999999999998766667999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHh
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~ellt  361 (511)
                                  .++.+||+|||++.......  .......||+.|+|||++.     +..++.++|||||||++|+|++
T Consensus       152 ------------~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  217 (302)
T 2j7t_A          152 ------------LEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ  217 (302)
T ss_dssp             ------------TTSCEEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCEEEEECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhc
Confidence                        47789999999975421110  0122357899999999883     6678999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |..||.......  .......    ..       .+  ....+...+..+.+||.+||+.||.+|||+.+|+++
T Consensus       218 g~~p~~~~~~~~--~~~~~~~----~~-------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          218 IEPPHHELNPMR--VLLKIAK----SD-------PP--TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             SSCTTTTSCHHH--HHHHHHH----SC-------CC--CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             CCCCCccCCHHH--HHHHHhc----cC-------Cc--ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            999997543211  0110000    00       00  001112235678999999999999999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.4e-44  Score=352.89  Aligned_cols=248  Identities=24%  Similarity=0.354  Sum_probs=204.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         ++..||||++....   ......+.+|+.++++++||||+++++++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   83 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQ---------NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF   83 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcC---------CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE
Confidence            3579999999999999999999865         57799999996432   12245688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++||||+++|+|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        84 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~-----------  148 (284)
T 2vgo_A           84 HDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMG-----------  148 (284)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEEC-----------
T ss_pred             EcCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEc-----------
Confidence            9999999999999999999999654 36899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||++.......    .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       149 --------------~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  210 (284)
T 2vgo_A          149 --------------YKGELKIADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP  210 (284)
T ss_dssp             --------------TTCCEEECCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCC
Confidence                          47789999999997654322    233579999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   .....   ...        .+.    .++...+..+.+||.+||+.||.+||++.+++++
T Consensus       211 pf~~~~~~---~~~~~---~~~--------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          211 PFDSPSHT---ETHRR---IVN--------VDL----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             TTCCSSHH---HHHHH---HHT--------TCC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             CCCCCCHh---HHHHH---Hhc--------ccc----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            99754221   11100   000        001    1112234678999999999999999999999874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4.6e-45  Score=356.86  Aligned_cols=249  Identities=27%  Similarity=0.437  Sum_probs=196.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||.||+|++           +|..||||+++...  ..+.+.+|+.++++++||||+++++++...
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-----------RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE   86 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-----------TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-----------cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            46899999999999999999987           36799999997653  346789999999999999999999987654


Q ss_pred             -CeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          208 -DQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       208 -~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       +..++||||+++|+|.+++.... ..+++..++.++.||+.||.|||+++   |+||||||+|||++            
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~------------  151 (278)
T 1byg_A           87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS------------  151 (278)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC------------
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEe------------
Confidence             47899999999999999996543 23789999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   .++.+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus       152 -------------~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  213 (278)
T 1byg_A          152 -------------EDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  213 (278)
T ss_dssp             -------------TTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCCcEEEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC
Confidence                         47789999999998654322     22467899999999999999999999999999999998 999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||......   ........              ......+...+..+.+||.+||+.||.+||++.++++.|+.+
T Consensus       214 p~~~~~~~---~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          214 PYPRIPLK---DVVPRVEK--------------GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             SCTTSCGG---GHHHHHTT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHH---HHHHHHhc--------------CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            99754321   11111110              011112223357889999999999999999999999998754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=6.8e-45  Score=370.94  Aligned_cols=253  Identities=14%  Similarity=0.039  Sum_probs=183.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHH---HHHhCCCCCCcceEe-
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEV---NFLGDLVHLNLVKLI-  201 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~---~il~~l~H~nIv~l~-  201 (511)
                      .+|.+.+.||+|+||.||+|++..         +++.||||++......   ....+.+|+   .+|+. +||||++++ 
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~  131 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVE---------RLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRR  131 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred             eeeeeeeeccCCCCEEEEEEEECC---------CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhce
Confidence            458889999999999999999875         6789999999876532   234566774   55556 799988755 


Q ss_pred             ------eEEEeC-----------------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHH
Q 010432          202 ------GYCIED-----------------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIR------MKIALGAAKGLAFL  252 (511)
Q Consensus       202 ------~~~~~~-----------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~------~~i~~qi~~gL~yL  252 (511)
                            +++...                 ...|||||||+ |+|.+++......+++..+      +.++.||+.||+||
T Consensus       132 ~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~L  210 (371)
T 3q60_A          132 RLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL  210 (371)
T ss_dssp             CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence                  455433                 33799999998 8999999765445566666      77889999999999


Q ss_pred             hcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccc
Q 010432          253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY  332 (511)
Q Consensus       253 H~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y  332 (511)
                      |+++   ||||||||+||||+                         .++.+||+|||+++.....     .....||+.|
T Consensus       211 H~~~---ivHrDikp~NIll~-------------------------~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y  257 (371)
T 3q60_A          211 QSKG---LVHGHFTPDNLFIM-------------------------PDGRLMLGDVSALWKVGTR-----GPASSVPVTY  257 (371)
T ss_dssp             HHTT---EEETTCSGGGEEEC-------------------------TTSCEEECCGGGEEETTCE-----EEGGGSCGGG
T ss_pred             HHCC---CccCcCCHHHEEEC-------------------------CCCCEEEEecceeeecCCC-----ccCccCCcCC
Confidence            9998   99999999999998                         4778999999999876431     2245678999


Q ss_pred             cCCccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHH
Q 010432          333 AAPEYVMT--GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK  410 (511)
Q Consensus       333 ~aPE~~~~--~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (511)
                      +|||++.+  ..|+.++|||||||+||||++|+.||...........   ..      ..........+........+..
T Consensus       258 ~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~  328 (371)
T 3q60_A          258 APREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW---KR------PSLRVPGTDSLAFGSCTPLPDF  328 (371)
T ss_dssp             CCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCC---CB------CCTTSCCCCSCCCTTSSCCCHH
T ss_pred             cChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccch---hh------hhhhhccccccchhhccCCCHH
Confidence            99999987  6899999999999999999999999986543211100   00      0000000011111111233578


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHH
Q 010432          411 AAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       411 ~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      +.+||.+||+.||.+|||+.++++
T Consensus       329 ~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          329 VKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.3e-44  Score=354.72  Aligned_cols=250  Identities=26%  Similarity=0.346  Sum_probs=205.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|.+.+.||+|+||.||+|++..         +++.||+|++.....   ...+.+.+|+.+++.++|+||+++++++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   84 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDAD---------TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF   84 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECC---------CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence            4678999999999999999999875         677999999976432   2235688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++           
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~-----------  149 (294)
T 2rku_A           85 EDNDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLN-----------  149 (294)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC-----------
T ss_pred             ccCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEc-----------
Confidence            9999999999999999999988654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+++........  .....||+.|+|||++.+..++.++|||||||++|+|++|+.
T Consensus       150 --------------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  213 (294)
T 2rku_A          150 --------------EDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP  213 (294)
T ss_dssp             --------------TTCCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEEeccCceecccCccc--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence                          4778999999999876432221  233579999999999998899999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   ......   ....        .    .++...+..+.+|+.+||+.||.+||++.+++++
T Consensus       214 p~~~~~~~---~~~~~~---~~~~--------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          214 PFETSCLK---ETYLRI---KKNE--------Y----SIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             TTCCSSHH---HHHHHH---HTTC--------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCCCCCHH---HHHHHH---hhcc--------C----CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            99754321   111000   0000        0    1111234678999999999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.1e-44  Score=376.31  Aligned_cols=199  Identities=22%  Similarity=0.338  Sum_probs=171.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC------CCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL------VHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l------~H~nIv~l~  201 (511)
                      ..+|+++++||+|+||.||+|++..         +++.||||++.... .....+.+|+.+++.+      .|+||++++
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~---------~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~  165 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHK---------VHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHML  165 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETT---------TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECC---------CCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEE
Confidence            3579999999999999999999875         67899999997642 2234577888888776      577999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +++...+..+|||||+. ++|.+++.... ..+++..++.|+.||+.||+|||+++   ||||||||+||||+.      
T Consensus       166 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~------  235 (429)
T 3kvw_A          166 ENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQ------  235 (429)
T ss_dssp             EEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESS------
T ss_pred             eecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcc------
Confidence            99999999999999995 69999987653 45899999999999999999999998   999999999999984      


Q ss_pred             CCcceeeeccccccccccccCc--eeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYN--AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~--~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                         ++.  +||+|||+++.....     ....+||+.|+|||++.+..|+.++|||||||+|||
T Consensus       236 -------------------~~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  291 (429)
T 3kvw_A          236 -------------------QGRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAE  291 (429)
T ss_dssp             -------------------TTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHH
T ss_pred             -------------------CCCcceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHH
Confidence                               433  999999999865432     223579999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCC
Q 010432          359 MLTGRRSMDKNR  370 (511)
Q Consensus       359 lltg~~pf~~~~  370 (511)
                      |++|..||.+..
T Consensus       292 lltG~~pf~~~~  303 (429)
T 3kvw_A          292 LLTGYPLLPGED  303 (429)
T ss_dssp             HHHSSCSSCCSS
T ss_pred             HHhCCCCCCCCC
Confidence            999999997654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=5e-45  Score=358.51  Aligned_cols=262  Identities=27%  Similarity=0.406  Sum_probs=199.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++....      +.+..||||+++....   ...+.+.+|+.++++++||||+++++++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV   90 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTT------SCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCC------CceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            357999999999999999999875421      1234799999976532   2345788999999999999999999998


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .... .++||||+++|+|.+++......+++..+..++.||+.||.|||+++   |+||||||+|||++           
T Consensus        91 ~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~-----------  155 (291)
T 1u46_A           91 LTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLA-----------  155 (291)
T ss_dssp             CSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEE-----------
T ss_pred             ccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEc-----------
Confidence            7655 88999999999999999766567899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-C
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  362 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g  362 (511)
                                    .++.+||+|||+++......... ......||..|+|||++.+..++.++|||||||++|||++ |
T Consensus       156 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  221 (291)
T 1u46_A          156 --------------TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG  221 (291)
T ss_dssp             --------------ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             --------------CCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence                          36789999999998765543221 2233568889999999998899999999999999999999 9


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      +.||......   .......   ...          .....+...+..+.+||.+||+.||.+||++.++++.|+.+.
T Consensus       222 ~~p~~~~~~~---~~~~~~~---~~~----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          222 QEPWIGLNGS---QILHKID---KEG----------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CCTTTTCCHH---HHHHHHH---TSC----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCcccCCHH---HHHHHHH---ccC----------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            9999754321   1111110   000          001111223578999999999999999999999999997654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=4.7e-45  Score=356.66  Aligned_cols=258  Identities=22%  Similarity=0.302  Sum_probs=203.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||+|++......  ..+.+.+|+.++++++||||+++++++.
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKS---------DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII   75 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECC---------CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence            3579999999999999999999875         6789999999865432  2356889999999999999999999886


Q ss_pred             e--CCeEEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEecccCCCcEEecccccc
Q 010432          206 E--DDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEA--ERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       206 ~--~~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~--~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      .  ....++||||+++|+|.+++...   ...+++..++.++.||+.||.|||+++  ..+|+||||||+|||++     
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~-----  150 (279)
T 2w5a_A           76 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD-----  150 (279)
T ss_dssp             EGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC-----
T ss_pred             cCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc-----
Confidence            5  56889999999999999998642   345899999999999999999999865  23499999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                          .++.+||+|||+++........  .....||+.|+|||++.+..++.++|||||||++|+
T Consensus       151 --------------------~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  208 (279)
T 2w5a_A          151 --------------------GKQNVKLGDFGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE  208 (279)
T ss_dssp             --------------------SSSCEEECCCCHHHHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             --------------------CCCCEEEecCchheeecccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHH
Confidence                                4778999999999876543221  223578999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      |++|+.||.....   ..+.......          ..+    .++...+..+.+||.+||+.||.+||++.+|++++..
T Consensus       209 l~~g~~p~~~~~~---~~~~~~i~~~----------~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          209 LCALMPPFTAFSQ---KELAGKIREG----------KFR----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             HHHSSCSSCCSSH---HHHHHHHHHT----------CCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHCCCCCcccCH---HHHHHHHhhc----------ccc----cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            9999999975432   1111111100          000    1112235788999999999999999999999987753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.6e-44  Score=370.53  Aligned_cols=289  Identities=19%  Similarity=0.210  Sum_probs=206.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC--------CCCcce
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV--------HLNLVK  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~--------H~nIv~  199 (511)
                      .++|++.++||+|+||+||+|++..         +++.||||+++... ...+.+.+|+.+|+.++        |+||++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQ---------GKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecC---------CCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            4689999999999999999998875         67899999997542 23456889999999885        788999


Q ss_pred             EeeEEE----eCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEec
Q 010432          200 LIGYCI----EDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLD  273 (511)
Q Consensus       200 l~~~~~----~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~  273 (511)
                      +++++.    .....||||||+ +++|.+++... ...+++..++.|+.||+.||.|||++ +   ||||||||+||||+
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~  181 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLS  181 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEEC
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEe
Confidence            999987    456789999999 66777776554 35699999999999999999999998 8   99999999999998


Q ss_pred             cccccc---------cCCcceee---------------eccccccccccccCceeeecCCCcccCCCCCcceeeeecccc
Q 010432          274 AVRAEN---------YGKFGFCI---------------YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT  329 (511)
Q Consensus       274 ~~~~~~---------~~~~~~~~---------------~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt  329 (511)
                      ..+...         +...+...               ...............+||+|||+++.....     .....||
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt  256 (397)
T 1wak_A          182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQT  256 (397)
T ss_dssp             CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSC
T ss_pred             ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCC
Confidence            543100         00000000               000000000012357999999999876432     2335799


Q ss_pred             ccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHH---hhhhhhccc------------------
Q 010432          330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVE---WARPHLGER------------------  388 (511)
Q Consensus       330 ~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~---~~~~~~~~~------------------  388 (511)
                      +.|+|||++.+..++.++|||||||+||||++|+.||.............   .........                  
T Consensus       257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  336 (397)
T 1wak_A          257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK  336 (397)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred             CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence            99999999999999999999999999999999999998655433211111   110000000                  


Q ss_pred             cccccccCCc---------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          389 RRFYRLIDPR---------LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       389 ~~~~~~~~~~---------~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ..+..+.+..         -....+...+..+.+||.+||+.||.+|||+.+|+++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            0000000000         0112356677889999999999999999999999975

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.5e-44  Score=361.24  Aligned_cols=269  Identities=23%  Similarity=0.360  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHH--hCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL--GDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il--~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|++           +++.||||++....   ...+..|.+++  ..++|+||+++++++.
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-----------~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~   77 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-----------DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDE   77 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-----------TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-----------CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheeccc
Confidence            46899999999999999999976           46799999997542   34455555554  4589999999998665


Q ss_pred             e-----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCCCeEecccCCCcEE
Q 010432          206 E-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE---------AERPVIYRDFKTSNIL  271 (511)
Q Consensus       206 ~-----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~---------~~~~iiHrDLKp~NIL  271 (511)
                      .     ....+||||||++|+|.+++...  ..++..++.++.||+.||.|||++         +   ||||||||+|||
T Consensus        78 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nil  152 (336)
T 3g2f_A           78 RVTADGRMEYLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVL  152 (336)
T ss_dssp             EECTTSCEEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEE
T ss_pred             ccccCCCceEEEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEE
Confidence            3     23578999999999999999654  358899999999999999999998         7   999999999999


Q ss_pred             eccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc------ceeeeeccccccccCCccccc-----
Q 010432          272 LDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK------THVSTRVMGTYGYAAPEYVMT-----  340 (511)
Q Consensus       272 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~------~~~~~~~~Gt~~y~aPE~~~~-----  340 (511)
                      |+                         .++.+||+|||+++.......      ........||+.|+|||++.+     
T Consensus       153 l~-------------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  207 (336)
T 3g2f_A          153 VK-------------------------NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLR  207 (336)
T ss_dssp             EC-------------------------TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGG
T ss_pred             Ec-------------------------CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccc
Confidence            98                         477899999999987543221      111234579999999999876     


Q ss_pred             --CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchh-HHHhhhhhhcccccc-----ccccCCccCCCC--CHHHHHH
Q 010432          341 --GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN-LVEWARPHLGERRRF-----YRLIDPRLEGHF--SIKGAQK  410 (511)
Q Consensus       341 --~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~  410 (511)
                        ..++.++|||||||++|||++|..||.......... ..............+     .....+.+....  ....+..
T Consensus       208 ~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T 3g2f_A          208 DXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS  287 (336)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHH
T ss_pred             cccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHH
Confidence              456789999999999999999987775433221110 000000000000000     000111111111  2345778


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          411 AAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       411 ~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      +.+||.+||+.||.+|||+.+|++.|+.+.
T Consensus       288 l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          288 LKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            999999999999999999999999998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7.1e-45  Score=359.37  Aligned_cols=264  Identities=24%  Similarity=0.366  Sum_probs=187.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ...++|++.+.||+|+||.||+|.+..         +++.||||++..... .....+.+|+.++++++||||+++++++
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   82 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAP---------KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF   82 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC-------------CEEEEECCC----------------CCCCCCCTTBCCEEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECC---------CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEE
Confidence            445789999999999999999998765         577999999875432 2345688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFR-------RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ...+..++||||+++|+|.+++..       ....+++..++.++.||+.||.|||+++   |+||||||+|||++    
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~----  155 (303)
T 2vwi_A           83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLG----  155 (303)
T ss_dssp             ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEC----
T ss_pred             eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEc----
Confidence            999999999999999999999863       2456899999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc---eeeeeccccccccCCccccc-CCCCccccchhHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT---HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFG  353 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~---~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlG  353 (511)
                                           .++.+||+|||++.........   .......||+.|+|||++.+ ..++.++||||||
T Consensus       156 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  214 (303)
T 2vwi_A          156 ---------------------EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG  214 (303)
T ss_dssp             ---------------------TTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHH
T ss_pred             ---------------------CCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHH
Confidence                                 4778999999999765432211   11233579999999999875 5789999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccc-cccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFY-RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |++|||++|+.||.........  ......   ...... ...++...    ...+..+.+||.+||+.||.+||++.++
T Consensus       215 ~il~~l~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~l  285 (303)
T 2vwi_A          215 ITAIELATGAAPYHKYPPMKVL--MLTLQN---DPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTAAEL  285 (303)
T ss_dssp             HHHHHHHHSSCTTTTSCGGGHH--HHHHTS---SCCCTTC-----CCC----CCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHHHHhCCCCCccCchhhHH--HHHhcc---CCCccccccccchhh----hhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence            9999999999999765432111  100000   000000 00011111    1224678999999999999999999999


Q ss_pred             HHH
Q 010432          433 VEA  435 (511)
Q Consensus       433 l~~  435 (511)
                      +++
T Consensus       286 l~h  288 (303)
T 2vwi_A          286 LRH  288 (303)
T ss_dssp             HTS
T ss_pred             hhC
Confidence            975

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.8e-44  Score=354.33  Aligned_cols=253  Identities=24%  Similarity=0.304  Sum_probs=187.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHH-HHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKE-WLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~-~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||+++...... ... +.++...++.++||||+++++++
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~   75 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVP---------SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL   75 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecC---------CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee
Confidence            34689999999999999999999865         67899999997653322 222 44455568889999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEecccccccc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ..++..++||||++ |+|.+++..   ....+++..++.++.||+.||.|||++ +   |+||||||+|||++       
T Consensus        76 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~-------  144 (290)
T 3fme_A           76 FREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLIN-------  144 (290)
T ss_dssp             ECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEEC-------
T ss_pred             eccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEEC-------
Confidence            99999999999996 588877753   456799999999999999999999997 8   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccc----ccCCCCccccchhHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV----MTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~----~~~~~~~~~DIwSlGvil  356 (511)
                                        .++.+||+|||+++.......   .....||+.|+|||++    .+..++.++|||||||++
T Consensus       145 ------------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il  203 (290)
T 3fme_A          145 ------------------ALGQVKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM  203 (290)
T ss_dssp             ------------------TTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHH
T ss_pred             ------------------CCCCEEEeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHH
Confidence                              467899999999987654322   2234799999999996    466789999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |||++|+.||....... ..+.....    .       ..   ........+..+.+|+.+||+.||.+|||+.+++++
T Consensus       204 ~~l~~g~~p~~~~~~~~-~~~~~~~~----~-------~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          204 IELAILRFPYDSWGTPF-QQLKQVVE----E-------PS---PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHHHHTSCSSCCCSCHH-HHHHHHHH----S-------CC---CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHCCCCccccCchH-HHHHHHhc----c-------CC---CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            99999999997532211 11111100    0       00   000111235678999999999999999999999863

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.4e-45  Score=362.79  Aligned_cols=257  Identities=28%  Similarity=0.401  Sum_probs=198.7

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEe
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLI  201 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~  201 (511)
                      .+....++|++.+.||+|+||.||+|++..         +++.||||++..... ....+.+|+.+++++ +||||++++
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~   87 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVK---------TGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYY   87 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEE
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECC---------CCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeee
Confidence            333456789999999999999999999865         577999999976543 346788999999999 899999999


Q ss_pred             eEEEe------CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          202 GYCIE------DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       202 ~~~~~------~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                      +++..      .+..++||||+++|+|.+++... ...+++..++.++.||+.||.|||+++   |+||||||+|||++ 
T Consensus        88 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~-  163 (326)
T 2x7f_A           88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLT-  163 (326)
T ss_dssp             EEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEC-
T ss_pred             eEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEc-
Confidence            99987      46789999999999999999754 356899999999999999999999998   99999999999998 


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccc
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDV  349 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DI  349 (511)
                                              .++.+||+|||++........  ......||+.|+|||++.     +..++.++||
T Consensus       164 ------------------------~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di  217 (326)
T 2x7f_A          164 ------------------------ENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL  217 (326)
T ss_dssp             ------------------------TTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHH
T ss_pred             ------------------------CCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchH
Confidence                                    477899999999987543221  123357999999999987     5678999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      |||||++|+|++|..||.......   ......   ..       ..+.+   .....+..+.+||.+||+.||.+||++
T Consensus       218 ~slG~il~~l~~g~~p~~~~~~~~---~~~~~~---~~-------~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~  281 (326)
T 2x7f_A          218 WSLGITAIEMAEGAPPLCDMHPMR---ALFLIP---RN-------PAPRL---KSKKWSKKFQSFIESCLVKNHSQRPAT  281 (326)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHH---HHHHHH---HS-------CCCCC---SCSCSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHHHHHHHHHHhCCCCCCCCcHHH---HHHHhh---cC-------ccccC---CccccCHHHHHHHHHHhccChhhCCCH
Confidence            999999999999999996543211   100000   00       00000   111224678999999999999999999


Q ss_pred             HHHHHH
Q 010432          430 SEVVEA  435 (511)
Q Consensus       430 ~eil~~  435 (511)
                      .+++++
T Consensus       282 ~~ll~h  287 (326)
T 2x7f_A          282 EQLMKH  287 (326)
T ss_dssp             HHHHTS
T ss_pred             HHHhhC
Confidence            999974

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.5e-43  Score=360.23  Aligned_cols=258  Identities=24%  Similarity=0.364  Sum_probs=206.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------cHHHHHHHHHHHhCC-C
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------GHKEWLAEVNFLGDL-V  193 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l-~  193 (511)
                      ......++|++.+.||+|+||.||+|++..         +|+.||||++......        ..+.+.+|+.+++++ +
T Consensus        88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~---------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~  158 (365)
T 2y7j_A           88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRA---------TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG  158 (365)
T ss_dssp             HHHHHHHHEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhhhhcccceEEecCCCEEEEEEEECC---------CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            334556789999999999999999999865         6789999999765321        124578899999999 8


Q ss_pred             CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       194 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      ||||+++++++......+|||||+++++|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++
T Consensus       159 hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~  234 (365)
T 2y7j_A          159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLD  234 (365)
T ss_dssp             CTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC
T ss_pred             CCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence            999999999999999999999999999999999654 46899999999999999999999998   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc------CCCCccc
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT------GHLTSRS  347 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~------~~~~~~~  347 (511)
                                               .++.+||+|||++........   .....||+.|+|||++.+      ..++.++
T Consensus       235 -------------------------~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  286 (365)
T 2y7j_A          235 -------------------------DNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEV  286 (365)
T ss_dssp             -------------------------TTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTH
T ss_pred             -------------------------CCCCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchh
Confidence                                     477899999999987654332   234679999999998863      3688999


Q ss_pred             cchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       348 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |||||||++|||++|+.||......   ........   ....   ...+. ..    ..+..+.+||.+||+.||.+||
T Consensus       287 Di~slG~il~ell~g~~pf~~~~~~---~~~~~i~~---~~~~---~~~~~-~~----~~~~~~~~li~~~L~~dP~~Rp  352 (365)
T 2y7j_A          287 DLWACGVILFTLLAGSPPFWHRRQI---LMLRMIME---GQYQ---FSSPE-WD----DRSSTVKDLISRLLQVDPEARL  352 (365)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHH---TCCC---CCHHH-HS----SSCHHHHHHHHHHSCSSTTTSC
T ss_pred             hHHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHh---CCCC---CCCcc-cc----cCCHHHHHHHHHHcCCChhHCc
Confidence            9999999999999999999754221   11111110   0000   00000 00    1246789999999999999999


Q ss_pred             CHHHHHHH
Q 010432          428 LMSEVVEA  435 (511)
Q Consensus       428 s~~eil~~  435 (511)
                      ++.+++++
T Consensus       353 s~~ell~h  360 (365)
T 2y7j_A          353 TAEQALQH  360 (365)
T ss_dssp             CHHHHHHS
T ss_pred             CHHHHhcC
Confidence            99999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.1e-44  Score=391.08  Aligned_cols=250  Identities=27%  Similarity=0.375  Sum_probs=197.6

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~l  212 (511)
                      +.||+|+||.||+|.+...       .+++.||||+++....  ...+.+.+|+.+|++|+|||||++++++.. +..+|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~-------~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~l  446 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMK-------KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWML  446 (635)
T ss_dssp             EEEEECSSEEEEEEEEECS-------SCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             CEeccCCCEEEEEEEEcCC-------CcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEE
Confidence            3799999999999977532       2567999999976432  234679999999999999999999999864 56889


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||||++|+|.+++... ..+++..++.|+.||+.||+|||+++   ||||||||+||||+                   
T Consensus       447 v~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~-------------------  503 (635)
T 4fl3_A          447 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLV-------------------  503 (635)
T ss_dssp             EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEE-------------------
T ss_pred             EEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEe-------------------
Confidence            99999999999999654 47899999999999999999999998   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNR  370 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~  370 (511)
                            .++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||+||||++ |+.||.+..
T Consensus       504 ------~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~  577 (635)
T 4fl3_A          504 ------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK  577 (635)
T ss_dssp             ------ETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             ------CCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence                  3778999999999876543321 22333467899999999999999999999999999999998 999997643


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ..   .+...+..              ......+..++..+.+||.+||+.||.+||++.+|++.|+.
T Consensus       578 ~~---~~~~~i~~--------------~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          578 GS---EVTAMLEK--------------GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             HH---HHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HH---HHHHHHHc--------------CCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            21   11111110              01111222345789999999999999999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.4e-43  Score=350.82  Aligned_cols=252  Identities=22%  Similarity=0.274  Sum_probs=198.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC----cccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG----LQGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .++|++.+.||+|+||.||+|.+..         ++..||||+++...    ......+.+|+.++++++||||++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   74 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSE---------TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV   74 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTT---------TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECC---------CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEE
Confidence            4689999999999999999998765         67899999997542    1234678899999999999999999999


Q ss_pred             EE--eCCeEEEEEEccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          204 CI--EDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       204 ~~--~~~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +.  .....++|||||.++ |.+++.. ....+++..++.++.||+.||.|||+++   |+||||||+|||++       
T Consensus        75 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~-------  143 (305)
T 2wtk_C           75 LYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLT-------  143 (305)
T ss_dssp             EECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-------
T ss_pred             EEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEc-------
Confidence            85  345789999999776 7777754 3456899999999999999999999998   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC--CCccccchhHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLE  358 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DIwSlGvil~e  358 (511)
                                        .++.+||+|||++................||+.|+|||++.+..  ++.++|||||||++||
T Consensus       144 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  205 (305)
T 2wtk_C          144 ------------------TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYN  205 (305)
T ss_dssp             ------------------TTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHH
T ss_pred             ------------------CCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHH
Confidence                              47789999999998765433332334567999999999987644  4789999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |++|+.||......   .......   ...        ..+    +...+..+.+||.+||+.||.+||++.+++++
T Consensus       206 l~~g~~p~~~~~~~---~~~~~i~---~~~--------~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          206 ITTGLYPFEGDNIY---KLFENIG---KGS--------YAI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHSSCSCCCSSHH---HHHHHHH---HCC--------CCC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHhCCCCCCCchHH---HHHHHHh---cCC--------CCC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            99999999754211   1111110   000        011    11234678999999999999999999999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7.7e-44  Score=347.47  Aligned_cols=249  Identities=27%  Similarity=0.338  Sum_probs=196.3

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++....   ......+.+|+.+++.++||||+++++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   80 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQL---------TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI   80 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECC---------CCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE
Confidence            4689999999999999999999865         57899999996532   22345788999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+++   |+||||||+|||++           
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~-----------  145 (276)
T 2h6d_A           81 STPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLD-----------  145 (276)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEEC-----------
T ss_pred             ecCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEEC-----------
Confidence            9999999999999999999999654 36899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~  363 (511)
                                    .++.+||+|||++........   .....||+.|+|||++.+..+ +.++|||||||++|+|++|+
T Consensus       146 --------------~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  208 (276)
T 2h6d_A          146 --------------AHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT  208 (276)
T ss_dssp             --------------TTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------CCCCEEEeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCC
Confidence                          477899999999987654322   233578999999999987765 68999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .||.....   ..+......   ..        ..    .+...+..+.+||.+||+.||.+|||+.+|+++
T Consensus       209 ~p~~~~~~---~~~~~~~~~---~~--------~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          209 LPFDDEHV---PTLFKKIRG---GV--------FY----IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CSSCCSSH---HHHHHHHHH---CC--------CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CCCCCCcH---HHHHHHhhc---Cc--------cc----CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            99975321   111111110   00        00    111224678999999999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=7.1e-44  Score=363.47  Aligned_cols=263  Identities=22%  Similarity=0.270  Sum_probs=193.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++++.||+|+||.||+|.+..         +++.||||++......  ....+.+|+.+++.++||||+++++++.
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   94 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAI---------LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT   94 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECC---------CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeec
Confidence            3689999999999999999999865         6789999999764322  2356889999999999999999999997


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..+      ..++|||||. |+|.+++.   ..+++..+..++.||+.||.|||+++   |+||||||+|||++      
T Consensus        95 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~------  161 (371)
T 2xrw_A           95 PQKSLEEFQDVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK------  161 (371)
T ss_dssp             SCCSTTTCCEEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC------
T ss_pred             cccccccccceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEc------
Confidence            654      7899999996 58888884   35889999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 -------------------~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  219 (371)
T 2xrw_A          162 -------------------SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  219 (371)
T ss_dssp             -------------------TTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             -------------------CCCCEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence                               47789999999998754322   12346799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhh------------------hhccccc-----cccccCCccCCC---CCHHHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARP------------------HLGERRR-----FYRLIDPRLEGH---FSIKGAQKAAQ  413 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~------------------~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~  413 (511)
                      ++|+.||.+......  +......                  .......     +...........   .....+..+.+
T Consensus       220 ~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (371)
T 2xrw_A          220 IKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD  297 (371)
T ss_dssp             HHSSCSSCCSSHHHH--HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHH
Confidence            999999976432111  0000000                  0000000     000000000000   11233678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHh
Q 010432          414 LAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       414 Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      ||.+||+.||.+|||+.+++++-
T Consensus       298 li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          298 LLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             HHHHHCcCChhhCCCHHHHhCCc
Confidence            99999999999999999999853

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.4e-44  Score=367.03  Aligned_cols=271  Identities=23%  Similarity=0.306  Sum_probs=199.4

Q ss_pred             ChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-----------HHHHHHHHHH
Q 010432          120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-----------HKEWLAEVNF  188 (511)
Q Consensus       120 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-----------~~~~~~E~~i  188 (511)
                      .+.++....++|++.+.||+|+||.||+|.+.          .|..||||++.......           .+.+.+|+.+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   82 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS----------EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL   82 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT----------TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECC----------CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHH
Confidence            34566777899999999999999999999864          37799999996532211           2578899999


Q ss_pred             HhCCCCCCcceEeeEEEeC-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 010432          189 LGDLVHLNLVKLIGYCIED-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR  263 (511)
Q Consensus       189 l~~l~H~nIv~l~~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHr  263 (511)
                      |++++||||+++++++...     ...|+||||+. |+|.+++......+++..+..++.||+.||.|||+++   |+||
T Consensus        83 l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~  158 (362)
T 3pg1_A           83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHR  158 (362)
T ss_dssp             HHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCC
T ss_pred             HHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEec
Confidence            9999999999999998653     36899999996 6999998776668999999999999999999999998   9999


Q ss_pred             ccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CC
Q 010432          264 DFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GH  342 (511)
Q Consensus       264 DLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~  342 (511)
                      ||||+|||++                         .++.+||+|||+++.......   .....||+.|+|||++.+ ..
T Consensus       159 Dlkp~NIl~~-------------------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~  210 (362)
T 3pg1_A          159 DLHPGNILLA-------------------------DNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKG  210 (362)
T ss_dssp             CCCGGGEEEC-------------------------TTCCEEECCTTC------------------CGGGCCHHHHTTCTT
T ss_pred             CCChHHEEEc-------------------------CCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCC
Confidence            9999999998                         477899999999986443322   234578999999999876 67


Q ss_pred             CCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc----------cccccccCCcc---C----CCCCH
Q 010432          343 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER----------RRFYRLIDPRL---E----GHFSI  405 (511)
Q Consensus       343 ~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~---~----~~~~~  405 (511)
                      ++.++|||||||++|+|++|+.||..........   .........          ......+...+   .    .....
T Consensus       211 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (362)
T 3pg1_A          211 FTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN---KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVP  287 (362)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHST
T ss_pred             CCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCC
Confidence            8999999999999999999999997643221111   100000000          00000000000   0    00111


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       406 ~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ..+..+.+||.+||+.||.+|||+.+++++
T Consensus       288 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          288 TADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            224678999999999999999999999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=6.8e-44  Score=356.27  Aligned_cols=257  Identities=26%  Similarity=0.340  Sum_probs=199.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--------ccHHHHHHHHHHHhCCCCCCcc
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--------QGHKEWLAEVNFLGDLVHLNLV  198 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~H~nIv  198 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||++.....        .....+.+|+.+|++++||||+
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   78 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERK---------TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII   78 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBC
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcC---------CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCc
Confidence            34679999999999999999999875         678999999975432        1123478999999999999999


Q ss_pred             eEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                      ++++++..++ .++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+++   |+||||||+|||++..+  
T Consensus        79 ~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~--  151 (322)
T 2ycf_A           79 KIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQE--  151 (322)
T ss_dssp             CEEEEEESSS-EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSS--
T ss_pred             eEeeEEcCCc-eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCC--
Confidence            9999987655 8999999999999999854 357899999999999999999999998   99999999999998421  


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc---cCCCCccccchhHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV  355 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvi  355 (511)
                                          .+..+||+|||+++.......   .....||+.|+|||++.   ...++.++|||||||+
T Consensus       152 --------------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  208 (322)
T 2ycf_A          152 --------------------EDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI  208 (322)
T ss_dssp             --------------------SSCCEEECCCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHH
T ss_pred             --------------------CCCeEEEccCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHH
Confidence                                244699999999987654321   22357999999999874   5678999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +|+|++|..||........  +.......   ...+    .+...    ...+..+.+||.+||+.||.+||++.+++++
T Consensus       209 l~~l~~g~~pf~~~~~~~~--~~~~~~~~---~~~~----~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          209 LFICLSGYPPFSEHRTQVS--LKDQITSG---KYNF----IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HHHHHHSSCSSCSTTCSSC--HHHHHHHT---CCCC----CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhCCCCCcccchHHH--HHHHHHhC---cccc----Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            9999999999976543221  11111100   0000    00000    1124678999999999999999999999974

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.8e-43  Score=355.77  Aligned_cols=265  Identities=26%  Similarity=0.393  Sum_probs=205.9

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhC--CCCCCcceEee
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHLNLVKLIG  202 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~--l~H~nIv~l~~  202 (511)
                      ....++|++.+.||+|+||.||+|++           +++.||||++...   ....+.+|++++..  ++||||+++++
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-----------~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~  103 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-----------RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIA  103 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-----------TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEE
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-----------cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEe
Confidence            34557899999999999999999987           3679999999643   24567889998887  79999999999


Q ss_pred             EEEeCC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecccCCCcE
Q 010432          203 YCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH--------EEAERPVIYRDFKTSNI  270 (511)
Q Consensus       203 ~~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH--------~~~~~~iiHrDLKp~NI  270 (511)
                      ++....    ..++||||+++|+|.+++...  .+++..++.++.||+.||.|||        +++   |+||||||+||
T Consensus       104 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NI  178 (342)
T 1b6c_B          104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNI  178 (342)
T ss_dssp             EEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGE
T ss_pred             eecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHE
Confidence            998876    789999999999999999653  6899999999999999999999        777   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccC------C
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG------H  342 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~------~  342 (511)
                      |++                         .++.+||+|||+++.........  ......||+.|+|||++.+.      .
T Consensus       179 ll~-------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  233 (342)
T 1b6c_B          179 LVK-------------------------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE  233 (342)
T ss_dssp             EEC-------------------------TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHH
T ss_pred             EEC-------------------------CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccc
Confidence            998                         47789999999998654433221  12345799999999998765      3


Q ss_pred             CCccccchhHHHHHHHHHhC----------CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCC-CCHHHHHHH
Q 010432          343 LTSRSDVYSFGVVLLEMLTG----------RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH-FSIKGAQKA  411 (511)
Q Consensus       343 ~~~~~DIwSlGvil~elltg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  411 (511)
                      ++.++|||||||++|||++|          ..||......... ...+......      ....+.+... .....+..+
T Consensus       234 ~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l  306 (342)
T 1b6c_B          234 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-VEEMRKVVCE------QKLRPNIPNRWQSCEALRVM  306 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC-HHHHHHHHTT------SCCCCCCCGGGGTSHHHHHH
T ss_pred             cCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCccc-HHHHHHHHHH------HHhCCCCcccccchhHHHHH
Confidence            44789999999999999999          7788654332111 1111110000      0111111111 123567889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          412 AQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       412 ~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      .+||.+||+.||.+|||+.+|+++|+.+.
T Consensus       307 ~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          307 AKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            99999999999999999999999998664

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-44  Score=366.35  Aligned_cols=271  Identities=18%  Similarity=0.224  Sum_probs=204.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcce--------
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVK--------  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~--------  199 (511)
                      .++|++.+.||+|+||.||+|++..+.... ....++.||||++...     ..+.+|+.++++++|||||+        
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~-~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~  114 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCD-SGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYST  114 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC------------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCcccc-ccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccC
Confidence            368999999999999999999987521100 0013679999999755     35789999999999999988        


Q ss_pred             -------EeeEEEe-CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcE
Q 010432          200 -------LIGYCIE-DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNI  270 (511)
Q Consensus       200 -------l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NI  270 (511)
                             +++++.. +...+|||||| +++|.+++... ...+++..++.++.||+.||.|||+++   |+||||||+||
T Consensus       115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NI  190 (352)
T 2jii_A          115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENI  190 (352)
T ss_dssp             TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGE
T ss_pred             CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHE
Confidence                   6777776 78889999999 99999999764 357999999999999999999999998   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccC--ceeeecCCCcccCCCCCcce-----eeeeccccccccCCcccccCCC
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDY--NAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMTGHL  343 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~~~~  343 (511)
                      |++.                         ++  .+||+|||+++.........     ......||+.|+|||++.+..+
T Consensus       191 l~~~-------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  245 (352)
T 2jii_A          191 FVDP-------------------------EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGP  245 (352)
T ss_dssp             EEET-------------------------TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCC
T ss_pred             EEcC-------------------------CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCC
Confidence            9984                         44  79999999998654322110     1123579999999999999999


Q ss_pred             CccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       344 ~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +.++|||||||+||||++|+.||....... ..+............   .+......   ....+..+.+||.+||+.||
T Consensus       246 ~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~l~~li~~~l~~dp  318 (352)
T 2jii_A          246 SRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-EDIMKQKQKFVDKPG---PFVGPCGH---WIRPSETLQKYLKVVMALTY  318 (352)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHHHHHHSCC---CEECTTSC---EECCCHHHHHHHHHHHTCCT
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCcCH-HHHHHHHHhccCChh---hhhhhccc---cCCCcHHHHHHHHHHHhCCh
Confidence            999999999999999999999997653221 111111111111111   11110000   01124778999999999999


Q ss_pred             CCCCCHHHHHHHhcCCC
Q 010432          424 KARPLMSEVVEALKPLP  440 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l~  440 (511)
                      .+||++.+|++.|+.+.
T Consensus       319 ~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          319 EEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             TCCCCHHHHHHHHHHHH
T ss_pred             hhCCCHHHHHHHHHHHH
Confidence            99999999999997654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.1e-44  Score=368.61  Aligned_cols=263  Identities=25%  Similarity=0.352  Sum_probs=184.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++++.||+|+||.||+|.+..         +|+.||||++.....  .....+.+|+.+|+.++||||+++++++.
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   98 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTK---------TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   98 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETT---------TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECC---------CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            3689999999999999999998865         688999999976432  23356889999999999999999999987


Q ss_pred             eC------CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 ED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..      ...++||||+ +++|.+++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++      
T Consensus        99 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~------  166 (367)
T 2fst_X           99 PARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVN------  166 (367)
T ss_dssp             SCSSGGGCCCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC------
T ss_pred             cCCccccCCeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEEC------
Confidence            54      5679999999 7899998854  46899999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+++.....     .+...||+.|+|||++.+ ..++.++|||||||++||
T Consensus       167 -------------------~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (367)
T 2fst_X          167 -------------------EDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  222 (367)
T ss_dssp             -------------------TTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHH
T ss_pred             -------------------CCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHH
Confidence                               4778999999999875432     234679999999999886 689999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhh--------hcc--ccccccccCCccCCCC---CHHHHHHHHHHHHHhcccCCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPH--------LGE--RRRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      |++|+.||.+.........+......        ...  ...+...+.......+   ....+..+.+||.+||+.||.+
T Consensus       223 ll~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~  302 (367)
T 2fst_X          223 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  302 (367)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCccc
Confidence            99999999765432111111100000        000  0000000000000000   0112467899999999999999


Q ss_pred             CCCHHHHHHH
Q 010432          426 RPLMSEVVEA  435 (511)
Q Consensus       426 RPs~~eil~~  435 (511)
                      |||+.+++++
T Consensus       303 R~t~~e~L~h  312 (367)
T 2fst_X          303 RITAAQALAH  312 (367)
T ss_dssp             SCCHHHHHTS
T ss_pred             CcCHHHHhcC
Confidence            9999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.1e-43  Score=366.34  Aligned_cols=275  Identities=21%  Similarity=0.317  Sum_probs=186.6

Q ss_pred             cCCCC-CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          129 RNFRP-ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       129 ~~y~~-~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      +.|++ .++||+|+||+||+|+++..       .++..||||++.....  ...+.+|+.+|++|+|||||++++++.. 
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~-------~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~   90 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDG-------KDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSH   90 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSS-------SCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEET
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccC-------CCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecC
Confidence            34665 45899999999999997642       1477899999976533  2568899999999999999999999965 


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                       ....+|||||+. |+|.+++...        ...+++..++.|+.||+.||.|||+++   ||||||||+||||...+.
T Consensus        91 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~  166 (405)
T 3rgf_A           91 ADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGP  166 (405)
T ss_dssp             TTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSST
T ss_pred             CCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCC
Confidence             678999999995 5888887521        224899999999999999999999999   999999999999953111


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccC-CCCccccchhHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVV  355 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvi  355 (511)
                                           .++.+||+|||+++........ ......+||+.|+|||++.+. .++.++||||||||
T Consensus       167 ---------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i  225 (405)
T 3rgf_A          167 ---------------------ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI  225 (405)
T ss_dssp             ---------------------TTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             ---------------------CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHH
Confidence                                 4678999999999876542211 123346899999999999874 58999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCc------hhHHHhhhhhhcc--ccccccc------------cCCccCCCCC---------HH
Q 010432          356 LLEMLTGRRSMDKNRPNGE------HNLVEWARPHLGE--RRRFYRL------------IDPRLEGHFS---------IK  406 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~------------~~~~~~~~~~---------~~  406 (511)
                      ||||++|+.||........      ..........++.  ...+..+            ..........         ..
T Consensus       226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (405)
T 3rgf_A          226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK  305 (405)
T ss_dssp             HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCC
T ss_pred             HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCC
Confidence            9999999999976543210      0111111000000  0000000            0000000000         00


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          407 GAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       407 ~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      .+..+.+||.+||+.||.+|||+.|++++-.
T Consensus       306 ~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~  336 (405)
T 3rgf_A          306 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPY  336 (405)
T ss_dssp             TTSHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence            1456889999999999999999999998643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.4e-43  Score=357.49  Aligned_cols=268  Identities=27%  Similarity=0.367  Sum_probs=190.5

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ....++|++.+.||+|+||.||+|++..         ++..||||++...... ...+.+|+..+..++||||+++++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~   88 (360)
T 3e3p_A           19 RKEMDRFQVERMAGQGTFGTVQLGKEKS---------TGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYF   88 (360)
T ss_dssp             HHHHTTEEEC----------CEEEEETT---------TCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred             hhhccceEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhh
Confidence            3456789999999999999999999875         6789999998665322 24567888889999999999999999


Q ss_pred             EeCCe-------EEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeEecccCCCcEEe
Q 010432          205 IEDDQ-------RLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLH--EEAERPVIYRDFKTSNILL  272 (511)
Q Consensus       205 ~~~~~-------~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~yLH--~~~~~~iiHrDLKp~NILl  272 (511)
                      .....       .++||||+.+ +|...+.   .....+++..+..++.||+.||.|||  +++   |+||||||+|||+
T Consensus        89 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll  164 (360)
T 3e3p_A           89 YTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLV  164 (360)
T ss_dssp             EEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEE
T ss_pred             hccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEE
Confidence            76433       7899999965 6655443   34567899999999999999999999  877   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchh
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYS  351 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwS  351 (511)
                      +.                        .++.+||+|||+++.......   .....||+.|+|||++.+. .++.++||||
T Consensus       165 ~~------------------------~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s  217 (360)
T 3e3p_A          165 NE------------------------ADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWS  217 (360)
T ss_dssp             ET------------------------TTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHH
T ss_pred             eC------------------------CCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHH
Confidence            83                        267899999999987654332   2345789999999998765 4899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCC----------------ccCCCCCHHHHHHHHHHH
Q 010432          352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDP----------------RLEGHFSIKGAQKAAQLA  415 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~Li  415 (511)
                      |||++|||++|+.||........  +.................+++                ..........+..+.+||
T Consensus       218 lG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  295 (360)
T 3e3p_A          218 VGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLL  295 (360)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHH
Confidence            99999999999999986532211  111111000000000000000                000111222467899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 010432          416 AHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       416 ~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+||+.||.+|||+.+++++
T Consensus       296 ~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          296 SALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHhccCccccCCHHHHhcC
Confidence            99999999999999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.5e-43  Score=360.05  Aligned_cols=269  Identities=23%  Similarity=0.291  Sum_probs=202.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ..+|++++.||+|+||.||+|++..         ++..||||++...... ....+.+|+.+|.+++||||+++++++..
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   96 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNL---------NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRA   96 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECC
T ss_pred             cccEEEEEEeecCCCeEEEEEEECC---------CCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEec
Confidence            3589999999999999999999865         6789999999754332 23568899999999999999999999976


Q ss_pred             C-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 D-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .     ...++||||+. |+|.+++...  .+++..+..++.||+.||.|||+++   |+||||||+|||++        
T Consensus        97 ~~~~~~~~~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~--------  162 (364)
T 3qyz_A           97 PTIEQMKDVYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLN--------  162 (364)
T ss_dssp             SSTTTCCCEEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC--------
T ss_pred             CCccccceEEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEEC--------
Confidence            4     36899999995 6999998653  5899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCccccc-CCCCccccchhHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~el  359 (511)
                                       .++.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus       163 -----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  225 (364)
T 3qyz_A          163 -----------------TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM  225 (364)
T ss_dssp             -----------------TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHH
Confidence                             4778999999999876432211 11234579999999998764 5589999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhcc----------cccc-ccccCCccC--CCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGE----------RRRF-YRLIDPRLE--GHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~--~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      ++|+.||.+.........+.........          ...+ .........  .......+..+.+||.+||+.||.+|
T Consensus       226 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  305 (364)
T 3qyz_A          226 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR  305 (364)
T ss_dssp             HHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             HHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhC
Confidence            9999999765433322111100000000          0000 000000000  00001224678999999999999999


Q ss_pred             CCHHHHHHHh
Q 010432          427 PLMSEVVEAL  436 (511)
Q Consensus       427 Ps~~eil~~L  436 (511)
                      ||+.+++++-
T Consensus       306 ~t~~e~l~hp  315 (364)
T 3qyz_A          306 IEVEQALAHP  315 (364)
T ss_dssp             CCHHHHHTSG
T ss_pred             CCHHHHhcCc
Confidence            9999999753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=8.4e-44  Score=351.28  Aligned_cols=255  Identities=23%  Similarity=0.370  Sum_probs=195.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++.... .....+.+|+.++++++||||+++++++.+ 
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   74 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNAL---------DSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLER   74 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred             cccchhhheeccCCcEEEEEEEEcC---------CCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhh
Confidence            4679999999999999999999865         57899999996532 233568899999999999999999998865 


Q ss_pred             ------------CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          207 ------------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       207 ------------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                                  ....++||||+++|+|.+++......+++..++.++.||+.||+|||+++   |+||||||+|||++ 
T Consensus        75 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~-  150 (303)
T 1zy4_A           75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFID-  150 (303)
T ss_dssp             CCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-
T ss_pred             cchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEc-
Confidence                        35678999999999999999876667888999999999999999999998   99999999999998 


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc------------ceeeeeccccccccCCcccccC-
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK------------THVSTRVMGTYGYAAPEYVMTG-  341 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~------------~~~~~~~~Gt~~y~aPE~~~~~-  341 (511)
                                              .++.+||+|||+++.......            ........||+.|+|||++.+. 
T Consensus       151 ------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  206 (303)
T 1zy4_A          151 ------------------------ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG  206 (303)
T ss_dssp             ------------------------TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCS
T ss_pred             ------------------------CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCC
Confidence                                    477899999999987543210            1112345799999999998764 


Q ss_pred             CCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhccc
Q 010432          342 HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       342 ~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~  421 (511)
                      .++.++|||||||++|||++   ||....     ..........        .....+...++...+..+.+||.+||+.
T Consensus       207 ~~~~~~Di~slG~il~~l~~---p~~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~li~~~l~~  270 (303)
T 1zy4_A          207 HYNEKIDMYSLGIIFFEMIY---PFSTGM-----ERVNILKKLR--------SVSIEFPPDFDDNKMKVEKKIIRLLIDH  270 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHHHHHHH--------STTCCCCTTCCTTTSHHHHHHHHHHTCS
T ss_pred             CCcchhhHHHHHHHHHHHHh---ccCCch-----hHHHHHHhcc--------ccccccCccccccchHHHHHHHHHHHhc
Confidence            78999999999999999998   553210     1111111000        0111122233334456789999999999


Q ss_pred             CCCCCCCHHHHHHHh
Q 010432          422 DPKARPLMSEVVEAL  436 (511)
Q Consensus       422 dP~~RPs~~eil~~L  436 (511)
                      ||.+|||+.+++++-
T Consensus       271 dp~~Rps~~~ll~h~  285 (303)
T 1zy4_A          271 DPNKRPGARTLLNSG  285 (303)
T ss_dssp             SGGGSCCHHHHHHSS
T ss_pred             CcccCcCHHHHhCCC
Confidence            999999999999854

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.4e-44  Score=357.95  Aligned_cols=262  Identities=24%  Similarity=0.343  Sum_probs=198.9

Q ss_pred             cChHHHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCC--C
Q 010432          119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLV--H  194 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~--H  194 (511)
                      +.+..+....++|++.+.||+|+||.||+|.+.          +++.||||++......  ....+.+|+.++.+++  |
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   87 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS   87 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECT----------TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGC
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcC----------CCcEEEEEEeccccccccchHHHHHHHHHHHhccccC
Confidence            333444455678999999999999999999864          3678999999765432  3356889999999997  5


Q ss_pred             CCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       195 ~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                      +||+++++++...+..++||| +.+++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++ 
T Consensus        88 ~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-  161 (313)
T 3cek_A           88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-  161 (313)
T ss_dssp             TTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-
T ss_pred             CceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-
Confidence            999999999999999999999 5588999999764 47899999999999999999999998   99999999999996 


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-----------CCC
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----------GHL  343 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-----------~~~  343 (511)
                                               ++.+||+|||+++...............||+.|+|||++.+           ..+
T Consensus       162 -------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~  216 (313)
T 3cek_A          162 -------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI  216 (313)
T ss_dssp             -------------------------TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CC
T ss_pred             -------------------------CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccC
Confidence                                     46799999999987654433222334579999999999875           478


Q ss_pred             CccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       344 ~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +.++|||||||++|||++|+.||.......     ....          ..+++.....++...+..+.+||.+||+.||
T Consensus       217 ~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  281 (313)
T 3cek_A          217 SPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLH----------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP  281 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHH----------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSST
T ss_pred             CchHHHHHHHHHHHHHHhCCCchhhHHHHH-----HHHH----------HHHhcccccCCcccchHHHHHHHHHHccCCc
Confidence            899999999999999999999997542210     0000          1111111111222224678999999999999


Q ss_pred             CCCCCHHHHHHHh
Q 010432          424 KARPLMSEVVEAL  436 (511)
Q Consensus       424 ~~RPs~~eil~~L  436 (511)
                      .+||++.+++++.
T Consensus       282 ~~Rps~~ell~h~  294 (313)
T 3cek_A          282 KQRISIPELLAHP  294 (313)
T ss_dssp             TTSCCHHHHHTSH
T ss_pred             ccCcCHHHHhcCc
Confidence            9999999999753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.2e-43  Score=350.04  Aligned_cols=254  Identities=25%  Similarity=0.334  Sum_probs=204.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---------ccHHHHHHHHHHHhCCC-CCC
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---------QGHKEWLAEVNFLGDLV-HLN  196 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---------~~~~~~~~E~~il~~l~-H~n  196 (511)
                      ..++|++.+.||+|+||.||+|.+..         +++.||||++.....         ...+.+.+|+.+|+++. |||
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~   85 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKP---------TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN   85 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             hhhccceeeeecCCCceEEEEEEEcC---------cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            34689999999999999999999875         678999999976531         11245789999999995 999


Q ss_pred             cceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccc
Q 010432          197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR  276 (511)
Q Consensus       197 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~  276 (511)
                      |+++++++......++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++   
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~---  158 (298)
T 1phk_A           86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLD---  158 (298)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC---
T ss_pred             EeeeeeeeccCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEc---
Confidence            999999999999999999999999999999654 46899999999999999999999998   99999999999998   


Q ss_pred             ccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc------cCCCCccccch
Q 010432          277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM------TGHLTSRSDVY  350 (511)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~------~~~~~~~~DIw  350 (511)
                                            .++.+||+|||++........   .....||+.|+|||++.      ...++.++|||
T Consensus       159 ----------------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~  213 (298)
T 1phk_A          159 ----------------------DDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW  213 (298)
T ss_dssp             ----------------------TTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHH
T ss_pred             ----------------------CCCcEEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccH
Confidence                                  477899999999987654332   23457999999999885      45688999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ||||++|||++|+.||......   .......   ....   ..     ........+..+.+||.+||+.||.+||++.
T Consensus       214 slG~~l~~l~~g~~p~~~~~~~---~~~~~~~---~~~~---~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  279 (298)
T 1phk_A          214 STGVIMYTLLAGSPPFWHRKQM---LMLRMIM---SGNY---QF-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE  279 (298)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHH---HHHHHHH---HTCC---CC-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             hHHHHHHHHHHCCCCCcCccHH---HHHHHHh---cCCc---cc-----CcccccccCHHHHHHHHHHccCCcccCCCHH
Confidence            9999999999999999754221   1111110   0000   00     0001112357789999999999999999999


Q ss_pred             HHHHH
Q 010432          431 EVVEA  435 (511)
Q Consensus       431 eil~~  435 (511)
                      +++++
T Consensus       280 ~ll~h  284 (298)
T 1phk_A          280 EALAH  284 (298)
T ss_dssp             HHTTS
T ss_pred             HHHhC
Confidence            99873

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1e-44  Score=361.29  Aligned_cols=261  Identities=20%  Similarity=0.336  Sum_probs=201.8

Q ss_pred             HHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       125 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      .+..++|++.+.||+|+||.||+|++..            .||||+++....  ...+.+.+|+.++++++|+||+++++
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~------------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   96 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG------------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG   96 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS------------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCE
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC------------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEE
Confidence            3445789999999999999999998753            599999975432  22345778999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++...+..++||||+++++|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++         
T Consensus        97 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~---------  164 (319)
T 2y4i_B           97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD---------  164 (319)
T ss_dssp             EEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---------
T ss_pred             EEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe---------
Confidence            999999999999999999999999776667999999999999999999999998   99999999999997         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCc---ceeeeeccccccccCCccccc---------CCCCccccch
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK---THVSTRVMGTYGYAAPEYVMT---------GHLTSRSDVY  350 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~---~~~~~~~~Gt~~y~aPE~~~~---------~~~~~~~DIw  350 (511)
                                       ++.+||+|||+++.......   ........||+.|+|||++.+         ..++.++|||
T Consensus       165 -----------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~  227 (319)
T 2y4i_B          165 -----------------NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVF  227 (319)
T ss_dssp             -------------------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHH
T ss_pred             -----------------CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHH
Confidence                             45799999999876432111   111223469999999999864         4578999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  430 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~  430 (511)
                      ||||++|||++|+.||......   .........          ..+...   ....+..+.+|+.+||+.||.+|||+.
T Consensus       228 slG~il~el~~g~~p~~~~~~~---~~~~~~~~~----------~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~  291 (319)
T 2y4i_B          228 ALGTIWYELHAREWPFKTQPAE---AIIWQMGTG----------MKPNLS---QIGMGKEISDILLFCWAFEQEERPTFT  291 (319)
T ss_dssp             HHHHHHHHHHHSSCSSSSCCHH---HHHHHHHTT----------CCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHH---HHHHHhccC----------CCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            9999999999999999754321   111111000          001010   011235688999999999999999999


Q ss_pred             HHHHHhcCCCCC
Q 010432          431 EVVEALKPLPNL  442 (511)
Q Consensus       431 eil~~L~~l~~~  442 (511)
                      +|++.|+.+...
T Consensus       292 ~l~~~l~~l~~~  303 (319)
T 2y4i_B          292 KLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHHTTC---
T ss_pred             HHHHHHHHHHHh
Confidence            999999988654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=6.2e-44  Score=388.86  Aligned_cols=263  Identities=24%  Similarity=0.362  Sum_probs=208.6

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEee
Q 010432          124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       124 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      .....++|++.+.||+|+||.||+|.+...+.      .+..||||+++..... ..+.+.+|+.+|++++|||||++++
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~  458 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPEN------PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG  458 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSS------CCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCC------ccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            33445789999999999999999999865322      4678999998764332 2357899999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++. ++..++|||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++         
T Consensus       459 ~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~---------  525 (656)
T 2j0j_A          459 VIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVS---------  525 (656)
T ss_dssp             EEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEE---------
T ss_pred             EEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEe---------
Confidence            984 56689999999999999999877667999999999999999999999998   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-  361 (511)
                                      .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ 
T Consensus       526 ----------------~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~  588 (656)
T 2j0j_A          526 ----------------SNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH  588 (656)
T ss_dssp             ----------------ETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ----------------CCCCEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHc
Confidence                            3778999999999876543322 2233567899999999998999999999999999999997 


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |..||.+....   .........          .    ....+..++..+.+||.+||+.||.+||++.+|++.|+.+
T Consensus       589 g~~Pf~~~~~~---~~~~~i~~~----------~----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          589 GVKPFQGVKNN---DVIGRIENG----------E----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             SCCTTTTCCHH---HHHHHHHHT----------C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHH---HHHHHHHcC----------C----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            99999754321   111111100          0    0111223357889999999999999999999999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-43  Score=352.68  Aligned_cols=269  Identities=23%  Similarity=0.309  Sum_probs=195.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEE--
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI--  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~--  205 (511)
                      .++|++.+.||+|+||.||+|.+..         +++.||||++........+.+.+|+.++++++||||+++++++.  
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   80 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDND---------CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPS   80 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETT---------TTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTT
T ss_pred             CCceeEEEEeccCCCeEEEEEEECC---------CCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccc
Confidence            3689999999999999999999875         67899999998765555567899999999999999999999873  


Q ss_pred             ------------eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          206 ------------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       206 ------------~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                                  .....++||||+. |+|.+++..  ..+++..++.++.||+.||+|||+++   |+||||||+|||++
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~  154 (320)
T 2i6l_A           81 GSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFIN  154 (320)
T ss_dssp             SCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEE
T ss_pred             ccccccccccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEc
Confidence                        3467899999996 699999854  46899999999999999999999998   99999999999997


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCccccc-CCCCccccchh
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYS  351 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwS  351 (511)
                      .                        ++..+||+|||+++........ .......||..|+|||++.+ ..++.++||||
T Consensus       155 ~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s  210 (320)
T 2i6l_A          155 T------------------------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA  210 (320)
T ss_dssp             T------------------------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHH
T ss_pred             C------------------------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHh
Confidence            3                        3568999999999876432111 11233568999999998875 67899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhc--cccccccc---------cCCcc-CCCCCHHHHHHHHHHHHHhc
Q 010432          352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG--ERRRFYRL---------IDPRL-EGHFSIKGAQKAAQLAAHCL  419 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~Li~~cl  419 (511)
                      |||++|||++|+.||...........+........  ....+...         ..+.. ........+..+.+||.+||
T Consensus       211 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  290 (320)
T 2i6l_A          211 AGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQIL  290 (320)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHc
Confidence            99999999999999986542211111000000000  00000000         00000 00001123577899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 010432          420 SRDPKARPLMSEVVEA  435 (511)
Q Consensus       420 ~~dP~~RPs~~eil~~  435 (511)
                      +.||.+|||+.+++++
T Consensus       291 ~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          291 TFSPMDRLTAEEALSH  306 (320)
T ss_dssp             CSSGGGSCCHHHHHTS
T ss_pred             CCCccccCCHHHHhCC
Confidence            9999999999999874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2.5e-44  Score=369.69  Aligned_cols=260  Identities=23%  Similarity=0.315  Sum_probs=193.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      .+|++.++||+|+||+||+|++..          +..||+|++......    ..+|+.+|+.++|||||++++++....
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~----------~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~  105 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVE----------SDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNG  105 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT----------TEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEES
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECC----------CCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecC
Confidence            468999999999999999999864          334888888654322    237999999999999999999996543


Q ss_pred             ------eEEEEEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          209 ------QRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       209 ------~~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                            ..++|||||++ +|...+.   .....+++..++.++.||+.||+|||+++   |+||||||+||||+.     
T Consensus       106 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~-----  176 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDP-----  176 (394)
T ss_dssp             SSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEET-----
T ss_pred             CCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcC-----
Confidence                  37899999976 4444332   23557999999999999999999999998   999999999999973     


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+++.......   .....||+.|+|||++.+. .|+.++|||||||++||
T Consensus       177 -------------------~~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  234 (394)
T 4e7w_A          177 -------------------PSGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE  234 (394)
T ss_dssp             -------------------TTTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             -------------------CCCcEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence                               367899999999987644332   2345789999999998765 58999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhc-c-------ccccc-----cccCCccCCCCCHHHHHHHHHHHHHhcccCCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLG-E-------RRRFY-----RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA  425 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~-~-------~~~~~-----~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~  425 (511)
                      |++|+.||.+.....  .+......... .       ...+.     ......+...+....+..+.+||.+||+.||.+
T Consensus       235 ll~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  312 (394)
T 4e7w_A          235 LMQGQPLFPGESGID--QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSA  312 (394)
T ss_dssp             HHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred             HHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhh
Confidence            999999998653221  11111110000 0       00000     000000001112223578999999999999999


Q ss_pred             CCCHHHHHHH
Q 010432          426 RPLMSEVVEA  435 (511)
Q Consensus       426 RPs~~eil~~  435 (511)
                      |||+.+++++
T Consensus       313 R~t~~e~l~h  322 (394)
T 4e7w_A          313 RLTAIEALCH  322 (394)
T ss_dssp             SCCHHHHHTS
T ss_pred             CCCHHHHhcC
Confidence            9999999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.7e-43  Score=354.79  Aligned_cols=284  Identities=21%  Similarity=0.272  Sum_probs=205.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC------CcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL------NLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~------nIv~l~  201 (511)
                      .++|++.+.||+|+||.||+|.+..        .+++.||||+++... ...+.+.+|+.+++.++|+      +|++++
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHK--------AGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT--------TTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecC--------CCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            4689999999999999999998742        157899999997542 2235678899999888665      499999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +++...+..+|||||+ +++|.+++.... ..+++..+..++.||+.||+|||+++   |+||||||+|||++.......
T Consensus        84 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  159 (339)
T 1z57_A           84 EWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEA  159 (339)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEE
T ss_pred             cccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccc
Confidence            9999999999999999 889999997654 46899999999999999999999998   999999999999985221000


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                      ..      ...........+..+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus       160 ~~------~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~  228 (339)
T 1z57_A          160 YN------PKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY  228 (339)
T ss_dssp             EC----------CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred             cC------CccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHH
Confidence            00      00000000012567999999999875432     22357999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhcc-------cccc------------------ccccCCc-cCCCCCHHHHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGE-------RRRF------------------YRLIDPR-LEGHFSIKGAQKAAQL  414 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~------------------~~~~~~~-~~~~~~~~~~~~~~~L  414 (511)
                      +|..||.....................       ....                  .....+. .........++.+.+|
T Consensus       229 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  308 (339)
T 1z57_A          229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL  308 (339)
T ss_dssp             HSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHH
Confidence            999999765332211111111100000       0000                  0000000 0011233557889999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 010432          415 AAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+||+.||.+|||+.||+++
T Consensus       309 i~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          309 IQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHhCcCcccccCHHHHhcC
Confidence            999999999999999999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.5e-43  Score=356.25  Aligned_cols=256  Identities=23%  Similarity=0.276  Sum_probs=176.6

Q ss_pred             hcCCCCCC-ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHH-HHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPES-LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV-NFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~-~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|.+.+ +||+|+||.||+|++..         +++.||||++...     ....+|+ ..++.+.||||+++++++.
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~   92 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRR---------TGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYE   92 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECC---------CCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHh
Confidence            46788855 69999999999999876         6789999999753     2223333 3456779999999999987


Q ss_pred             e----CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 E----DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      .    ....+||||||++|+|.+++.... ..+++..++.++.||+.||.|||+++   |+||||||+|||++..+    
T Consensus        93 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~----  165 (336)
T 3fhr_A           93 NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKE----  165 (336)
T ss_dssp             EEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSS----
T ss_pred             hccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecC----
Confidence            6    455899999999999999997653 46999999999999999999999998   99999999999998422    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .+..+||+|||+++......    .....||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       166 ------------------~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  223 (336)
T 3fhr_A          166 ------------------KDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  223 (336)
T ss_dssp             ------------------TTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------------CCceEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHH
Confidence                              25569999999998654322    23357899999999998889999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      +|..||.............  . .       .......+........+..+.+||.+||+.||.+|||+.+++++-
T Consensus       224 ~g~~pf~~~~~~~~~~~~~--~-~-------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  289 (336)
T 3fhr_A          224 CGFPPFYSNTGQAISPGMK--R-R-------IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP  289 (336)
T ss_dssp             HSSCCC-------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             HCCCCCCCccchhhhhhHH--H-h-------hhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            9999997543321100000  0 0       000000011111122357889999999999999999999999853

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=9.1e-44  Score=358.93  Aligned_cols=263  Identities=19%  Similarity=0.264  Sum_probs=203.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-----------------HHHHHHHHHHHh
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-----------------HKEWLAEVNFLG  190 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-----------------~~~~~~E~~il~  190 (511)
                      .++|++.+.||+|+||.||+|++           +++.||||++.......                 ...+.+|+.+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   98 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-----------DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT   98 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-----------TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHT
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-----------CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHH
Confidence            46899999999999999999987           36799999997532211                 167899999999


Q ss_pred             CCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEe
Q 010432          191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRR-SLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIY  262 (511)
Q Consensus       191 ~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiH  262 (511)
                      +++||||+++++++...+..++||||+++|+|.++      +... ...+++..++.++.||+.||.|||+ ++   |+|
T Consensus        99 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H  175 (348)
T 2pml_X           99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICH  175 (348)
T ss_dssp             TCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EEC
T ss_pred             hCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---Eee
Confidence            99999999999999999999999999999999998      5432 4679999999999999999999998 88   999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-  341 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-  341 (511)
                      |||||+|||++                         .++.+||+|||++......    ......||+.|+|||++.+. 
T Consensus       176 ~dl~p~Nil~~-------------------------~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~  226 (348)
T 2pml_X          176 RDVKPSNILMD-------------------------KNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNES  226 (348)
T ss_dssp             CCCCGGGEEEC-------------------------TTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCC
T ss_pred             cCCChHhEEEc-------------------------CCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCC
Confidence            99999999998                         4778999999999876443    23446799999999999877 


Q ss_pred             CCCc-cccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccc-ccccccCCcc---CCCCCHHHHHHHHHHHH
Q 010432          342 HLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERR-RFYRLIDPRL---EGHFSIKGAQKAAQLAA  416 (511)
Q Consensus       342 ~~~~-~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~Li~  416 (511)
                      .++. ++|||||||++|||++|+.||......  ............... .......+..   ........+..+.+||.
T Consensus       227 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  304 (348)
T 2pml_X          227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK  304 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHH
Confidence            6766 999999999999999999999765431  111111111000000 0000000000   00001223578899999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 010432          417 HCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       417 ~cl~~dP~~RPs~~eil~~  435 (511)
                      +||+.||.+||++.+++++
T Consensus       305 ~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          305 LFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             HHCCSSGGGSCCHHHHHTS
T ss_pred             HHccCChhhCCCHHHHhcC
Confidence            9999999999999999984

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.4e-43  Score=357.81  Aligned_cols=204  Identities=24%  Similarity=0.286  Sum_probs=172.2

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CC-----CcceE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HL-----NLVKL  200 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~-----nIv~l  200 (511)
                      ..++|++.++||+|+||+||+|++..         +++.||||+++... .....+.+|+.++..+. |+     +|+++
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRV---------EQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETT---------TTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcC---------CCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            45789999999999999999999875         67899999997542 22355778888888874 44     49999


Q ss_pred             eeEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ++++...+..+|||||+. |+|.+++.... ..+++..+..++.||+.||.|||.+. .+||||||||+||||+..    
T Consensus       122 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~----  195 (382)
T 2vx3_A          122 KRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNP----  195 (382)
T ss_dssp             EEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESST----
T ss_pred             eeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecC----
Confidence            999999999999999995 69999997653 46899999999999999999999532 239999999999999631    


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||+||||
T Consensus       196 -------------------~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  251 (382)
T 2vx3_A          196 -------------------KRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM  251 (382)
T ss_dssp             -------------------TSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             -------------------CCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHH
Confidence                               3567999999999876442     2235799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCC
Q 010432          360 LTGRRSMDKNR  370 (511)
Q Consensus       360 ltg~~pf~~~~  370 (511)
                      ++|+.||....
T Consensus       252 ltg~~pf~~~~  262 (382)
T 2vx3_A          252 HTGEPLFSGAN  262 (382)
T ss_dssp             HHSSCSSCCSS
T ss_pred             HhCCCCCCCCC
Confidence            99999998654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.8e-43  Score=351.57  Aligned_cols=255  Identities=27%  Similarity=0.353  Sum_probs=180.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHH-HHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVN-FLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~-il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|.+..         +|+.||||++...... ....+.+|+. +++.++||||+++++++.
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKP---------SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETT---------TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcC---------CCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            4689999999999999999999865         6789999999865432 2345666666 778889999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEecccccccc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFR----RSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ..+..++||||+. |+|.+++..    ....+++..+..++.|++.||.|||++ +   |+||||||+|||++       
T Consensus        92 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~-------  160 (327)
T 3aln_A           92 REGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLD-------  160 (327)
T ss_dssp             CSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEE-------
T ss_pred             eCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEc-------
Confidence            9999999999996 488877752    245789999999999999999999998 8   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccc----ccCCCCccccchhHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV----MTGHLTSRSDVYSFGVVL  356 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~----~~~~~~~~~DIwSlGvil  356 (511)
                                        .++.+||+|||+++.......   .....||+.|+|||++    .+..++.++|||||||++
T Consensus       161 ------------------~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il  219 (327)
T 3aln_A          161 ------------------RSGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL  219 (327)
T ss_dssp             ------------------TTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHH
T ss_pred             ------------------CCCCEEEccCCCceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHH
Confidence                              477899999999987644321   2234799999999998    456789999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |||++|+.||.......     .....       ......+.+........+..+.+||.+||+.||.+||++.+|+++
T Consensus       220 ~~l~~g~~pf~~~~~~~-----~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          220 YELATGRFPYPKWNSVF-----DQLTQ-------VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             HHHHHSCCCSSCC------------CC-------CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHCCCCCCCcchHH-----HHHHH-------HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            99999999997532210     00000       000011111111112235789999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2.3e-43  Score=346.49  Aligned_cols=256  Identities=25%  Similarity=0.351  Sum_probs=204.4

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||++.....  .....+.+|+.++++++||||+++++++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~---------~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRI---------TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL   90 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcC---------CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE
Confidence            45689999999999999999999865         577999999965432  3456789999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ...+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++..+        
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~--------  158 (287)
T 2wei_A           91 EDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKE--------  158 (287)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSS--------
T ss_pred             eCCCeEEEEEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCC--------
Confidence            9999999999999999999988654 36899999999999999999999998   99999999999997421        


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .+..+||+|||++........   .....||+.|+|||++.+ .++.++|||||||++|+|++|..
T Consensus       159 --------------~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~  220 (287)
T 2wei_A          159 --------------KDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTP  220 (287)
T ss_dssp             --------------TTCCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CcccEEEeccCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCC
Confidence                          245799999999987544322   223468999999998765 58999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||......   ........   ....   ...+     .....+..+.+||.+||+.||.+|||+.+++++
T Consensus       221 p~~~~~~~---~~~~~~~~---~~~~---~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          221 PFYGKNEY---DILKRVET---GKYA---FDLP-----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             SSCCSSHH---HHHHHHHH---CCCC---CCSG-----GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CCCCCCHH---HHHHHHHc---CCCC---CCch-----hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            99764321   11111110   0000   0000     001224678999999999999999999999984

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=6.5e-43  Score=356.35  Aligned_cols=260  Identities=22%  Similarity=0.331  Sum_probs=197.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|.+.+.||+|+||.||+|.+..         +|+.||||++.......  ...+.+|+.+++.++||||+++++++.
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  111 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKR---------SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT  111 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECC---------CCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhhee
Confidence            3689999999999999999999876         68899999997654322  356889999999999999999999998


Q ss_pred             eCCeE------EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDDQR------LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~~~------~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..+..      ++||||+. ++|.+++.   ..+++..+..++.||+.||+|||+++   |+||||||+|||++      
T Consensus       112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~------  178 (371)
T 4exu_A          112 PASSLRNFYDFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVN------  178 (371)
T ss_dssp             SCSSSTTCCCCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC------
T ss_pred             ccCCcccceeEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEEC------
Confidence            76654      99999996 68888773   34899999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+++.....     .....||+.|+|||++.+ ..++.++|||||||++||
T Consensus       179 -------------------~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (371)
T 4exu_A          179 -------------------EDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE  234 (371)
T ss_dssp             -------------------TTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHH
T ss_pred             -------------------CCCCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHH
Confidence                               4778999999999865432     234678999999999887 789999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccc------------cccccCCccCCC---CCHHHHHHHHHHHHHhcccCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRR------------FYRLIDPRLEGH---FSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~---~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      |++|+.||........  +.............            +...+.......   .....+..+.+||.+||+.||
T Consensus       235 l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  312 (371)
T 4exu_A          235 MLTGKTLFKGKDYLDQ--LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV  312 (371)
T ss_dssp             HHHSSCSCCCSSHHHH--HHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCT
T ss_pred             HHhCCCCCCCCChHHH--HHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCCh
Confidence            9999999976432211  11110000000000            000000000000   011225788999999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      .+|||+.+++++
T Consensus       313 ~~Rpt~~ell~h  324 (371)
T 4exu_A          313 DKRLTAAQALTH  324 (371)
T ss_dssp             TTSCCHHHHHTS
T ss_pred             hhcCCHHHHhcC
Confidence            999999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.6e-43  Score=360.52  Aligned_cols=270  Identities=21%  Similarity=0.261  Sum_probs=202.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-----------CCC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-----------HLN  196 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----------H~n  196 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++.... .....+.+|+.+++++.           |+|
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~   87 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMV---------NNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANH   87 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecC---------CCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccch
Confidence            3589999999999999999999865         67899999997542 22356788999999886           899


Q ss_pred             cceEeeEEEeCC----eEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcE
Q 010432          197 LVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNI  270 (511)
Q Consensus       197 Iv~l~~~~~~~~----~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NI  270 (511)
                      |+++++++...+    ..++||||+ +++|.+++... ...+++..++.++.||+.||+|||++ +   |+||||||+||
T Consensus        88 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NI  163 (373)
T 1q8y_A           88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENV  163 (373)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGE
T ss_pred             HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHe
Confidence            999999988654    789999999 89999999753 34699999999999999999999997 8   99999999999


Q ss_pred             EeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccch
Q 010432          271 LLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  350 (511)
Q Consensus       271 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIw  350 (511)
                      ||+..+..                   .....+||+|||+++.....     .....||+.|+|||++.+..++.++|||
T Consensus       164 ll~~~~~~-------------------~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~  219 (373)
T 1q8y_A          164 LMEIVDSP-------------------ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIW  219 (373)
T ss_dssp             EEEEEETT-------------------TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHH
T ss_pred             EEeccCCC-------------------cCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHH
Confidence            99642210                   02457999999999876442     2235799999999999999999999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCCCCCch---hHHHhhhhhhccc-----------------cccccccCC----------ccC
Q 010432          351 SFGVVLLEMLTGRRSMDKNRPNGEH---NLVEWARPHLGER-----------------RRFYRLIDP----------RLE  400 (511)
Q Consensus       351 SlGvil~elltg~~pf~~~~~~~~~---~~~~~~~~~~~~~-----------------~~~~~~~~~----------~~~  400 (511)
                      ||||+||||++|+.||.........   .............                 ......+..          ...
T Consensus       220 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (373)
T 1q8y_A          220 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK  299 (373)
T ss_dssp             HHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhc
Confidence            9999999999999999765422111   0000000000000                 000000000          001


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          401 GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       401 ~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ..++...+..+.+||.+||+.||.+|||+.+|+++
T Consensus       300 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          300 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             TCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             ccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            13456778899999999999999999999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1e-43  Score=359.21  Aligned_cols=268  Identities=24%  Similarity=0.289  Sum_probs=199.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|++..         +|+.||||++...... ....+.+|+.+|++++||||+++++++..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   80 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKP---------TGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRP   80 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECC---------CCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecc
Confidence            4689999999999999999999875         6889999999754322 23467899999999999999999998875


Q ss_pred             C-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 D-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .     ...++||||+. |+|.+++..  ..+++..+..++.||+.||.|||+++   |+||||||+|||++        
T Consensus        81 ~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~--------  146 (353)
T 2b9h_A           81 DSFENFNEVYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLIN--------  146 (353)
T ss_dssp             SCSTTCCCEEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC--------
T ss_pred             cccCccceEEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEc--------
Confidence            4     67899999996 699999865  36899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcce--------eeeeccccccccCCccccc-CCCCccccchhH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--------VSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSF  352 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--------~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSl  352 (511)
                                       .++.+||+|||+++.........        ......||+.|+|||++.+ ..++.++|||||
T Consensus       147 -----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl  209 (353)
T 2b9h_A          147 -----------------SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC  209 (353)
T ss_dssp             -----------------TTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHH
T ss_pred             -----------------CCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHH
Confidence                             47789999999998764322111        1123578999999998764 778999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhcccc-----------ccccccCCccCC---CCCHHHHHHHHHHHHHh
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERR-----------RFYRLIDPRLEG---HFSIKGAQKAAQLAAHC  418 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~---~~~~~~~~~~~~Li~~c  418 (511)
                      ||++|||++|+.||.+.........+...........           .....+......   ......+..+.+||.+|
T Consensus       210 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  289 (353)
T 2b9h_A          210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM  289 (353)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHh
Confidence            9999999999999976532111110000000000000           000000000000   00012356789999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 010432          419 LSRDPKARPLMSEVVEA  435 (511)
Q Consensus       419 l~~dP~~RPs~~eil~~  435 (511)
                      |+.||.+|||+.+++++
T Consensus       290 L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          290 LVFDPAKRITAKEALEH  306 (353)
T ss_dssp             SCSSGGGSCCHHHHHTS
T ss_pred             cCcCcccCCCHHHHhcC
Confidence            99999999999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7.5e-43  Score=352.53  Aligned_cols=284  Identities=20%  Similarity=0.238  Sum_probs=204.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCC------cceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN------LVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~n------Iv~l~  201 (511)
                      .++|++.+.||+|+||.||+|.+...        .+..||||+++... .....+.+|+.+++++.|++      |+.++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHAR--------GKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT--------TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCC--------CceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            46899999999999999999998652        23689999997542 23356788999999987665      99999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +++...+..+|||||+ +++|.+++.... ..+++..++.++.||+.||.|||+++   |+||||||+|||++..+....
T Consensus        89 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~  164 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETL  164 (355)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEE
T ss_pred             eeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccc
Confidence            9999999999999999 677877776543 56999999999999999999999998   999999999999953211000


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                      ...      ..........+..+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|||+
T Consensus       165 ~~~------~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~  233 (355)
T 2eu9_A          165 YNE------HKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY  233 (355)
T ss_dssp             ECC------C-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             ccc------cccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH
Confidence            000      00000000146789999999998754422     3357999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhcc-------cccc------------------ccccCC-ccCCCCCHHHHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGE-------RRRF------------------YRLIDP-RLEGHFSIKGAQKAAQL  414 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~------------------~~~~~~-~~~~~~~~~~~~~~~~L  414 (511)
                      +|+.||...........+.........       ....                  .....+ ..........+..+.+|
T Consensus       234 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  313 (355)
T 2eu9_A          234 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL  313 (355)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHH
Confidence            999999764332111111111100000       0000                  000000 00001123446789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 010432          415 AAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       415 i~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+||+.||.+|||+.+++++
T Consensus       314 i~~~L~~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          314 MRRMLEFDPAQRITLAEALLH  334 (355)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHhcCChhhCcCHHHHhcC
Confidence            999999999999999999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=3.5e-43  Score=351.27  Aligned_cols=266  Identities=25%  Similarity=0.329  Sum_probs=200.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCC---CCCCcceEe
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDL---VHLNLVKLI  201 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l---~H~nIv~l~  201 (511)
                      ..++|++.+.||+|+||.||+|++..        .+++.||||++.....  .....+.+|+.+++.+   .||||++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~   80 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLK--------NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF   80 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETT--------TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEE
T ss_pred             chhceeeeeeecccccEEEEEEEecC--------CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeee
Confidence            45789999999999999999999852        1577999999964322  1123466787777666   899999999


Q ss_pred             eEEE-----eCCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          202 GYCI-----EDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       202 ~~~~-----~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      +++.     .....++||||+. |+|.+++.... ..+++..++.++.||+.||.|||+++   |+||||||+|||++  
T Consensus        81 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~--  154 (326)
T 1blx_A           81 DVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVT--  154 (326)
T ss_dssp             EEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC--
T ss_pred             eeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEc--
Confidence            9987     4567899999996 69999997643 35899999999999999999999998   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                             .++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||+
T Consensus       155 -----------------------~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  208 (326)
T 1blx_A          155 -----------------------SSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI  208 (326)
T ss_dssp             -----------------------TTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             -----------------------CCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence                                   47789999999998754322   1234578999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhc--ccccccc----------ccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLG--ERRRFYR----------LIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      +|||++|+.||........   .........  ....+..          .........+....+..+.+||.+||+.||
T Consensus       209 l~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  285 (326)
T 1blx_A          209 FAEMFRRKPLFRGSSDVDQ---LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  285 (326)
T ss_dssp             HHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSST
T ss_pred             HHHHHcCCCCCCCCCHHHH---HHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCc
Confidence            9999999999976532211   111110000  0000000          000000011122335778999999999999


Q ss_pred             CCCCCHHHHHHH
Q 010432          424 KARPLMSEVVEA  435 (511)
Q Consensus       424 ~~RPs~~eil~~  435 (511)
                      .+||++.+++++
T Consensus       286 ~~Rpt~~e~l~h  297 (326)
T 1blx_A          286 AKRISAYSALSH  297 (326)
T ss_dssp             TTSCCHHHHHTS
T ss_pred             ccCCCHHHHhcC
Confidence            999999999964

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=352.15  Aligned_cols=259  Identities=23%  Similarity=0.329  Sum_probs=197.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|.+.+.||+|+||.||+|++..         +|+.||||++......  ....+.+|+.+|+.++||||+++++++.
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   93 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKR---------SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT   93 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECC---------CCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEe
Confidence            3579999999999999999999875         6889999999765332  2356889999999999999999999998


Q ss_pred             eCCe------EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDDQ------RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~~------~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ....      .++||||+. |+|.+++.   ..+++..+..++.||+.||.|||+++   |+||||||+|||++      
T Consensus        94 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~------  160 (353)
T 3coi_A           94 PASSLRNFYDFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVN------  160 (353)
T ss_dssp             SCSSGGGCCCCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEEC------
T ss_pred             cccccccceeEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeEC------
Confidence            7654      499999996 68888773   25899999999999999999999998   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+++.....     .....||+.|+|||++.+ ..++.++|||||||++||
T Consensus       161 -------------------~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~e  216 (353)
T 3coi_A          161 -------------------EDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE  216 (353)
T ss_dssp             -------------------TTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHH
T ss_pred             -------------------CCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHH
Confidence                               4778999999999875432     233578999999999876 678999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhcc-cc------------ccccccCCccC---CCCCHHHHHHHHHHHHHhcccC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGE-RR------------RFYRLIDPRLE---GHFSIKGAQKAAQLAAHCLSRD  422 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~---~~~~~~~~~~~~~Li~~cl~~d  422 (511)
                      |++|+.||.+......   .......... ..            .+...+.....   .......+..+.+||.+||+.|
T Consensus       217 l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  293 (353)
T 3coi_A          217 MLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD  293 (353)
T ss_dssp             HHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSC
T ss_pred             HHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCC
Confidence            9999999976532111   1110000000 00            00000000000   1111234678999999999999


Q ss_pred             CCCCCCHHHHHHH
Q 010432          423 PKARPLMSEVVEA  435 (511)
Q Consensus       423 P~~RPs~~eil~~  435 (511)
                      |.+|||+.+++++
T Consensus       294 p~~Rpt~~e~l~h  306 (353)
T 3coi_A          294 VDKRLTAAQALTH  306 (353)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             cccCCCHHHHhcC
Confidence            9999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-42  Score=359.80  Aligned_cols=257  Identities=24%  Similarity=0.317  Sum_probs=191.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~  206 (511)
                      ..+|.+.++||+|+||+||.....          +++.||||++......   .+.+|+.+|+++ +|||||++++++.+
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~----------~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~   89 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMF----------DNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKD   89 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEES----------SSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEE
T ss_pred             cEEEecCCeeecCcCEEEEEEEEe----------CCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEec
Confidence            356888899999999996643322          5779999999765432   356899999999 89999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ....|||||||. |+|.+++......+....++.++.||+.||.|||+++   ||||||||+||||+..+..        
T Consensus        90 ~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~--------  157 (432)
T 3p23_A           90 RQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAH--------  157 (432)
T ss_dssp             TTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTT--------
T ss_pred             CCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCC--------
Confidence            999999999995 6999999876656666667899999999999999998   9999999999999642210        


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccc---cCCCCccccchhHHHHHHHHHh-
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLT-  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DIwSlGvil~ellt-  361 (511)
                                  ....+||+|||+++........ .......||+.|+|||++.   ...++.++|||||||++|||++ 
T Consensus       158 ------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~  225 (432)
T 3p23_A          158 ------------GKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE  225 (432)
T ss_dssp             ------------TBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTT
T ss_pred             ------------CceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcC
Confidence                        2456889999999876543211 1233467999999999997   4577889999999999999999 


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  436 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L  436 (511)
                      |..||.......    ....   ... ... .      ........+..+.+||.+||+.||.+|||+.+|+++-
T Consensus       226 g~~pf~~~~~~~----~~~~---~~~-~~~-~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp  285 (432)
T 3p23_A          226 GSHPFGKSLQRQ----ANIL---LGA-CSL-D------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP  285 (432)
T ss_dssp             SCBTTBSTTTHH----HHHH---TTC-CCC-T------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred             CCCCcchhhHHH----HHHH---hcc-CCc-c------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence            899985432110    0000   000 000 0      0011224466789999999999999999999999753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=8.5e-43  Score=348.24  Aligned_cols=244  Identities=24%  Similarity=0.371  Sum_probs=200.1

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCC--CCCcc
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLV--HLNLV  198 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~--H~nIv  198 (511)
                      ..++|++.+.||+|+||.||+|++..         +++.||||++......      ....+.+|+.+++++.  |+||+
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~  111 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVS---------DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI  111 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETT---------TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBC
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECC---------CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCce
Confidence            45789999999999999999998865         6789999999764322      1234668999999996  59999


Q ss_pred             eEeeEEEeCCeEEEEEEccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          199 KLIGYCIEDDQRLLVYEFMPR-GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       199 ~l~~~~~~~~~~~lv~E~~~~-g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      ++++++...+..++||||+.+ ++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++.   
T Consensus       112 ~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~---  184 (320)
T 3a99_A          112 RLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDL---  184 (320)
T ss_dssp             CEEEEEECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEET---
T ss_pred             EEEEEEecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeC---
Confidence            999999999999999999976 8999998654 46899999999999999999999998   999999999999973   


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVL  356 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil  356 (511)
                                           +++.+||+|||+++......    .....||+.|+|||++.+..+ +.++|||||||++
T Consensus       185 ---------------------~~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il  239 (320)
T 3a99_A          185 ---------------------NRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILL  239 (320)
T ss_dssp             ---------------------TTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHH
T ss_pred             ---------------------CCCCEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHH
Confidence                                 36789999999998765432    233579999999999987666 7889999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       357 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |||++|+.||....     .   ...    ...        .+..    ..+..+.+||.+||+.||.+||++.+|+++
T Consensus       240 ~el~~g~~pf~~~~-----~---~~~----~~~--------~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          240 YDMVCGDIPFEHDE-----E---IIR----GQV--------FFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HHHHHSSCSCCSHH-----H---HHH----CCC--------CCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHCCCCCCChh-----h---hhc----ccc--------cccc----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            99999999996421     0   000    000        0111    124678999999999999999999999974

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-43  Score=348.05  Aligned_cols=246  Identities=26%  Similarity=0.413  Sum_probs=193.3

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc------HHHHHHHHHHHhCC----CCC
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG------HKEWLAEVNFLGDL----VHL  195 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~------~~~~~~E~~il~~l----~H~  195 (511)
                      ...++|++.+.||+|+||.||+|++..         +++.||||++.......      ...+.+|+.++.++    +|+
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~   98 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLT---------DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP   98 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTT---------TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCS
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEcc---------CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCC
Confidence            445789999999999999999998765         67799999997654321      12356799999888    899


Q ss_pred             CcceEeeEEEeCCeEEEEEEc-cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecc
Q 010432          196 NLVKLIGYCIEDDQRLLVYEF-MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA  274 (511)
Q Consensus       196 nIv~l~~~~~~~~~~~lv~E~-~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~  274 (511)
                      ||+++++++...+..++|||| +.+++|.+++... ..+++..++.++.||+.||.|||+++   |+||||||+|||++.
T Consensus        99 ~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~  174 (312)
T 2iwi_A           99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDL  174 (312)
T ss_dssp             SBCCEEEEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEET
T ss_pred             CeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeC
Confidence            999999999999999999999 7899999999654 36899999999999999999999998   999999999999973


Q ss_pred             ccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHH
Q 010432          275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFG  353 (511)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlG  353 (511)
                                              .++.+||+|||+++......    .....||..|+|||++.+..+ +.++||||||
T Consensus       175 ------------------------~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  226 (312)
T 2iwi_A          175 ------------------------RRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLG  226 (312)
T ss_dssp             ------------------------TTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHH
T ss_pred             ------------------------CCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHH
Confidence                                    36779999999998765432    234579999999999887666 4589999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010432          354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  433 (511)
Q Consensus       354 vil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil  433 (511)
                      |++|||++|+.||....     ...   .    ..            ..++...+..+.+||.+||+.||.+||++.+++
T Consensus       227 ~il~~l~~g~~pf~~~~-----~~~---~----~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l  282 (312)
T 2iwi_A          227 ILLYDMVCGDIPFERDQ-----EIL---E----AE------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL  282 (312)
T ss_dssp             HHHHHHHHSSCSCCSHH-----HHH---H----TC------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHHHCCCCCCChH-----HHh---h----hc------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            99999999999996321     000   0    00            011122346789999999999999999999999


Q ss_pred             HHh
Q 010432          434 EAL  436 (511)
Q Consensus       434 ~~L  436 (511)
                      ++-
T Consensus       283 ~~~  285 (312)
T 2iwi_A          283 LDP  285 (312)
T ss_dssp             HST
T ss_pred             cCh
Confidence            854

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=8.2e-42  Score=339.96  Aligned_cols=253  Identities=28%  Similarity=0.412  Sum_probs=182.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-HHH-HHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKE-WLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-~~~-~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|++.+.||+|+||.||+|++..         +|+.||||++....... ..+ +.++..+++.++||||+++++++.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~   94 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRK---------TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI   94 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETT---------TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEec---------CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe
Confidence            4678899999999999999999875         57799999998654322 223 444556788899999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeEecccCCCcEEeccccccccCCcc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .++..++||||+ ++.+..++......+++..++.++.||+.||.|||+. +   |+||||||+|||++           
T Consensus        95 ~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~-----------  159 (318)
T 2dyl_A           95 TNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLD-----------  159 (318)
T ss_dssp             CSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEEC-----------
T ss_pred             cCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEEC-----------
Confidence            999999999999 5566666655456799999999999999999999985 8   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHH
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~el  359 (511)
                                    .++.+||+|||++........   .....||+.|+|||++.     ...++.++|||||||++|||
T Consensus       160 --------------~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l  222 (318)
T 2dyl_A          160 --------------ERGQIKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL  222 (318)
T ss_dssp             --------------TTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHH
T ss_pred             --------------CCCCEEEEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHH
Confidence                          477899999999986544322   23357999999999984     55789999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ++|+.||......  .......   ....       .+.+..  ....+..+.+||.+||+.||.+||++.+|+++
T Consensus       223 ~~g~~pf~~~~~~--~~~~~~~---~~~~-------~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          223 ATGQFPYKNCKTD--FEVLTKV---LQEE-------PPLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHSSCTTTTCCSH--HHHHHHH---HHSC-------CCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HhCCCCCCCCCcc--HHHHHHH---hccC-------CCCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            9999999753221  1111111   1110       000110  01124678999999999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.1e-41  Score=354.48  Aligned_cols=265  Identities=23%  Similarity=0.264  Sum_probs=189.1

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCCcceEeeEEEeCC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLNLVKLIGYCIEDD  208 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~l~~~~~~~~  208 (511)
                      .|.+.++||+|+||+||.+...          +|+.||||++....   .+.+.+|+.+|.++ +|||||++++++.+++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~----------~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSF----------QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDR   82 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEES----------SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             eeeccCeEeeCCCeEEEEEEEE----------CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            4555678999999999875432          57899999997532   35678999999876 8999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLP------LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~------l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ..+||||||. |+|.+++......      ..+..++.++.||+.||+|||+++   ||||||||+|||++..+......
T Consensus        83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~  158 (434)
T 2rio_A           83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQ  158 (434)
T ss_dssp             EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCC
T ss_pred             eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCccccccc
Confidence            9999999995 6999999654321      122345679999999999999998   99999999999997532100000


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCccccc-------CCCCccccchhHH
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMT-------GHLTSRSDVYSFG  353 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DIwSlG  353 (511)
                                  .....+..+||+|||+++.........  ......||+.|+|||++.+       ..++.++||||||
T Consensus       159 ------------~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG  226 (434)
T 2rio_A          159 ------------QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG  226 (434)
T ss_dssp             ------------TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHH
T ss_pred             ------------ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHH
Confidence                        000135689999999998765532211  1234579999999999875       6789999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010432          354 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  432 (511)
Q Consensus       354 vil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~ei  432 (511)
                      |++|||++ |+.||.......    .......    ..     .+..........+.++.+||.+||+.||.+|||+.+|
T Consensus       227 ~il~ellt~g~~Pf~~~~~~~----~~i~~~~----~~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei  293 (434)
T 2rio_A          227 CVFYYILSKGKHPFGDKYSRE----SNIIRGI----FS-----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV  293 (434)
T ss_dssp             HHHHHHHTTSCCTTCSTTTHH----HHHHHTC----CC-----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHHhCCCCCCCCchhhH----HHHhcCC----CC-----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence            99999999 999996542211    0111100    00     0111122234567889999999999999999999999


Q ss_pred             HHHh
Q 010432          433 VEAL  436 (511)
Q Consensus       433 l~~L  436 (511)
                      +++-
T Consensus       294 l~hp  297 (434)
T 2rio_A          294 LRHP  297 (434)
T ss_dssp             HTSG
T ss_pred             HhCC
Confidence            9753

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.4e-42  Score=370.14  Aligned_cols=264  Identities=27%  Similarity=0.331  Sum_probs=199.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||.||+|.+..         +|..||||++..... ...+.+.+|+.+|++++||||+++++++..
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~---------tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~   83 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQD---------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDG   83 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTT---------TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTT
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECC---------CCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecc
Confidence            3689999999999999999998765         678999999976532 234568899999999999999999998755


Q ss_pred             ------CCeEEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          207 ------DDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       207 ------~~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                            ++..++|||||++|+|.+++....  ..+++..++.++.||+.||.|||+++   |+||||||+|||++..+  
T Consensus        84 ~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g--  158 (676)
T 3qa8_A           84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGP--  158 (676)
T ss_dssp             TCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCS--
T ss_pred             cccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCC--
Confidence                  667899999999999999997543  36889999999999999999999998   99999999999998422  


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~e  358 (511)
                                          ....+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++||
T Consensus       159 --------------------~~~~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLye  215 (676)
T 3qa8_A          159 --------------------QRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE  215 (676)
T ss_dssp             --------------------SSCEEEECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHH
T ss_pred             --------------------CceeEEEcccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHH
Confidence                                234589999999987654332   234679999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccc---ccccccc--------CCccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGER---RRFYRLI--------DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  427 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP  427 (511)
                      |++|..||.....     ...|........   .......        .......+....+..+.+||.+||..||.+||
T Consensus       216 LltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRP  290 (676)
T 3qa8_A          216 CITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRG  290 (676)
T ss_dssp             HHSSCSSCCSSCH-----HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---
T ss_pred             HHHCCCCCCcccc-----hhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCc
Confidence            9999999975311     111110000000   0000000        00112234455678999999999999999999


Q ss_pred             CHHHHH
Q 010432          428 LMSEVV  433 (511)
Q Consensus       428 s~~eil  433 (511)
                      |+.+++
T Consensus       291 Ta~elL  296 (676)
T 3qa8_A          291 TDPQNP  296 (676)
T ss_dssp             CCTTCC
T ss_pred             CHHHHh
Confidence            997754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.4e-40  Score=328.83  Aligned_cols=230  Identities=21%  Similarity=0.287  Sum_probs=180.7

Q ss_pred             cCCCCC-CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHH-hCCCCCCcceEeeEEEe
Q 010432          129 RNFRPE-SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL-GDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~-~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il-~~l~H~nIv~l~~~~~~  206 (511)
                      ++|.+. ++||+|+||.||+|.+..         +++.||||++...     ..+.+|+.++ +.++||||+++++++..
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~---------~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~   82 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKR---------TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYEN   82 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcC---------CCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhh
Confidence            567777 789999999999999875         6789999999643     5677899988 66699999999999987


Q ss_pred             ----CCeEEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 ----DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                          ....+||||||++|+|.+++.... ..+++..++.++.||+.||.|||+++   |+||||||+|||++...     
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~-----  154 (299)
T 3m2w_A           83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKR-----  154 (299)
T ss_dssp             EETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSS-----
T ss_pred             hcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCC-----
Confidence                677899999999999999997653 46999999999999999999999998   99999999999998421     


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||++....                        +..++.++|||||||++|||++
T Consensus       155 -----------------~~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~t  193 (299)
T 3m2w_A          155 -----------------PNAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLC  193 (299)
T ss_dssp             -----------------TTCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHH
Confidence                             25779999999986432                        2457889999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS----IKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |+.||..........       ....     .+...  ...++    ...+..+.+||.+||+.||.+|||+.+++++
T Consensus       194 g~~pf~~~~~~~~~~-------~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          194 GYPPFYSNHGLAISP-------GMKT-----RIRMG--QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SSCSCCC-------C-------CSCC-----SSCTT--CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCCCCCcchhhhH-------HHHH-----HHhhc--cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            999997543211000       0000     00000  00111    1235789999999999999999999999975

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.7e-40  Score=326.21  Aligned_cols=230  Identities=13%  Similarity=0.078  Sum_probs=183.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||.||+|++..         +++.||||++.......   .+.+.+|+.++.+++||||+++++++
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~  100 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTA---------LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV  100 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETT---------TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecC---------CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE
Confidence            3679999999999999999999865         67899999998764432   25688999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      ..++..|||||||++++|.+++...   .....+..|+.||+.||+|||+++   |+||||||+||||+           
T Consensus       101 ~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~-----------  163 (286)
T 3uqc_A          101 HTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVS-----------  163 (286)
T ss_dssp             EETTEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEE-----------
T ss_pred             EECCcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEc-----------
Confidence            9999999999999999999998432   345568889999999999999999   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+++|                      |++       .++.++|||||||+||||++|+.
T Consensus       164 --------------~~g~~kl~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~  200 (286)
T 3uqc_A          164 --------------IDGDVVLAYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRW  200 (286)
T ss_dssp             --------------TTSCEEECSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEE
T ss_pred             --------------CCCCEEEEecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCC
Confidence                          47778887443                      444       36899999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE--GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ||...........             ....+.....  .......+..+.+||.+||+.||.+| |+.++++.|+.+.
T Consensus       201 Pf~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          201 PLPEAGVRSGLAP-------------AERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             CSCCCSBCCCSEE-------------CCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             CCCcCCcchhhHH-------------HHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            9986543221000             0000000000  00111235678999999999999999 9999999998654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.2e-41  Score=367.47  Aligned_cols=239  Identities=25%  Similarity=0.391  Sum_probs=191.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.++||+|+||.||+|++...        +++.||||++..... .....+.+|+.+|.+++|||||++++++..
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~--------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  150 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNV--------NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEH  150 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGG--------TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCC--------CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEee
Confidence            36899999999999999999998641        467999999875432 233568899999999999999999999987


Q ss_pred             CCe-----EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          207 DDQ-----RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       207 ~~~-----~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      .+.     .|||||||++++|.+++..   .+++..++.|+.||+.||.|||+++   ||||||||+||||+        
T Consensus       151 ~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~--------  216 (681)
T 2pzi_A          151 TDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLT--------  216 (681)
T ss_dssp             ECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC--------
T ss_pred             cCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEe--------
Confidence            655     7999999999999988743   6899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                        ...+||+|||+++.....      ....||+.|+|||++.+. ++.++|||||||+||+|++
T Consensus       217 ------------------~~~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~  271 (681)
T 2pzi_A          217 ------------------EEQLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTL  271 (681)
T ss_dssp             ------------------SSCEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHS
T ss_pred             ------------------CCcEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHh
Confidence                              237999999999876543      335799999999988765 4889999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHhc
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-MSEVVEALK  437 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-~~eil~~L~  437 (511)
                      |..||........                    .    ........+..+.+||.+||+.||.+||+ +.++...|.
T Consensus       272 g~~~~~~~~~~~~--------------------~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          272 DLPTRNGRYVDGL--------------------P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             CCCEETTEECSSC--------------------C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CCCCCcccccccc--------------------c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            9988864211100                    0    00011123467889999999999999995 555555554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=5e-41  Score=347.24  Aligned_cols=242  Identities=19%  Similarity=0.187  Sum_probs=182.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc---cHHHHHHHHHHHhCCCC-CCcce----
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ---GHKEWLAEVNFLGDLVH-LNLVK----  199 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~H-~nIv~----  199 (511)
                      ..+|...++||+|+||+||+|++..         +|+.||||++......   ..+.+.+|+.+++.+.| .|+..    
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~---------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~  147 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQE---------TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVH  147 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHH
T ss_pred             ceeEEEecccccCCCEEEEEEEecC---------CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHh
Confidence            3457778899999999999999876         6789999999844322   24678899999999987 32211    


Q ss_pred             -----------------EeeEEEe-----CCeEEEEEEccCCCCHHHHHh------hCCCCCCHHHHHHHHHHHHHHHHH
Q 010432          200 -----------------LIGYCIE-----DDQRLLVYEFMPRGSLENHLF------RRSLPLPWSIRMKIALGAAKGLAF  251 (511)
Q Consensus       200 -----------------l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~------~~~~~l~~~~~~~i~~qi~~gL~y  251 (511)
                                       +..++..     ....+++|+++ +++|.+++.      .....+++..++.++.||+.||+|
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  226 (413)
T 3dzo_A          148 LRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLAS  226 (413)
T ss_dssp             TCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHH
Confidence                             1111111     22457788877 789999884      223457788899999999999999


Q ss_pred             HhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeecccccc
Q 010432          252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG  331 (511)
Q Consensus       252 LH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~  331 (511)
                      ||+++   ||||||||+||||+                         .++.+||+|||+++.....     ....+| +.
T Consensus       227 LH~~~---iiHrDiKp~NILl~-------------------------~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~  272 (413)
T 3dzo_A          227 LHHYG---LVHTYLRPVDIVLD-------------------------QRGGVFLTGFEHLVRDGAS-----AVSPIG-RG  272 (413)
T ss_dssp             HHHTT---EECSCCCGGGEEEC-------------------------TTCCEEECCGGGCEETTEE-----ECCCCC-TT
T ss_pred             HHhCC---cccCCcccceEEEe-------------------------cCCeEEEEeccceeecCCc-----cccCCC-Cc
Confidence            99998   99999999999998                         4777999999999875432     334578 99


Q ss_pred             ccCCccc----------ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCC
Q 010432          332 YAAPEYV----------MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG  401 (511)
Q Consensus       332 y~aPE~~----------~~~~~~~~~DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (511)
                      |+|||++          .+..|+.++|||||||+||||++|+.||.........                ..++..  ..
T Consensus       273 y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~----------------~~~~~~--~~  334 (413)
T 3dzo_A          273 FAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS----------------EWIFRS--CK  334 (413)
T ss_dssp             TCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS----------------GGGGSS--CC
T ss_pred             eeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH----------------HHHHhh--cc
Confidence            9999999          5556888999999999999999999999754321110                001110  01


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          402 HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       402 ~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .    .+..+.+||.+||+.||.+||++.+++++
T Consensus       335 ~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          335 N----IPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             C----CCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             c----CCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            1    24679999999999999999999998763

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2e-41  Score=340.51  Aligned_cols=264  Identities=15%  Similarity=0.133  Sum_probs=186.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--------ccHHHHHHHHHHHhCCC------
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--------QGHKEWLAEVNFLGDLV------  193 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~------  193 (511)
                      .++|++.+.||+|+||+||+|++           +|+.||||++.....        ...+.+.+|+.+|+.|+      
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-----------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~   87 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-----------DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEV   87 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-----------TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCS
T ss_pred             cccchheeeecccCceEEEEEEe-----------CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccc
Confidence            45788999999999999999987           367999999986532        22367889999998885      


Q ss_pred             ---CCCcceEeeEEE------------------------------eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHH
Q 010432          194 ---HLNLVKLIGYCI------------------------------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK  240 (511)
Q Consensus       194 ---H~nIv~l~~~~~------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~  240 (511)
                         |+|||++++++.                              ..+..|||||||++|+|.+.+.+  ..+++..++.
T Consensus        88 ~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~  165 (336)
T 2vuw_A           88 CNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKS  165 (336)
T ss_dssp             SSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHH
T ss_pred             cccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHH
Confidence               778877777653                              26789999999999977776643  4689999999


Q ss_pred             HHHHHHHHHHHHh-cCCCCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCc
Q 010432          241 IALGAAKGLAFLH-EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK  319 (511)
Q Consensus       241 i~~qi~~gL~yLH-~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~  319 (511)
                      |+.||+.||+||| +++   ||||||||+||||+..+.... .++..    ......-.....+||+|||+|+.....  
T Consensus       166 i~~qi~~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~-~~~~~----~~~~~~~~~~~~vkL~DFG~a~~~~~~--  235 (336)
T 2vuw_A          166 ILHQLTASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKL-HYTLN----GKSSTIPSCGLQVSIIDYTLSRLERDG--  235 (336)
T ss_dssp             HHHHHHHHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEE-EEEET----TEEEEEECTTEEEEECCCTTCBEEETT--
T ss_pred             HHHHHHHHHHHHHHhCC---EeECCCCHHHEEEeccCCcce-eeecc----CccccccCCCceEEEeeccccEecCCC--
Confidence            9999999999999 888   999999999999985321000 00000    000000001237999999999875432  


Q ss_pred             ceeeeeccccccccCCcccccCCCCccccchhHHHH-HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCc
Q 010432          320 THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV-LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPR  398 (511)
Q Consensus       320 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (511)
                           ..+||+.|||||++.+.. +.++||||||++ .+++++|..||...      ..............    .....
T Consensus       236 -----~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~----~~~~~  299 (336)
T 2vuw_A          236 -----IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQM----TFKTK  299 (336)
T ss_dssp             -----EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTC----CCSSC
T ss_pred             -----cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhh----ccCcc
Confidence                 247999999999998766 899999998777 78899999988421      00000000000000    00111


Q ss_pred             cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH-HH
Q 010432          399 LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV-EA  435 (511)
Q Consensus       399 ~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil-~~  435 (511)
                      .........++++.+||.+||++|     |+.|++ ++
T Consensus       300 ~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          300 CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred             cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence            111123456889999999999977     999998 64

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.98  E-value=4.8e-34  Score=305.57  Aligned_cols=185  Identities=17%  Similarity=0.102  Sum_probs=129.4

Q ss_pred             cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc----------cHHHHHHHHHHHhCC-CCCCcceEeeEEE
Q 010432          137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ----------GHKEWLAEVNFLGDL-VHLNLVKLIGYCI  205 (511)
Q Consensus       137 lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----------~~~~~~~E~~il~~l-~H~nIv~l~~~~~  205 (511)
                      ++.|++|.+..++...         .|+.||||++......          ..++|.+|+++|+++ .|+||+++++++.
T Consensus       242 ~~~~~~~~h~~~rr~~---------fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e  312 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYF---------FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE  312 (569)
T ss_dssp             -C--------CCEEEE---------ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE
T ss_pred             cccCCccccccccccc---------ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE
Confidence            4556666555554433         5779999999765321          124689999999999 7999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++...|||||||+|++|.++|.+. .+++..   .|+.||+.||+|||++|   ||||||||+||||+            
T Consensus       313 d~~~~yLVMEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~------------  373 (569)
T 4azs_A          313 NAQSGWLVMEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVD------------  373 (569)
T ss_dssp             CSSEEEEEEECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEEC------------
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEEC------------
Confidence            999999999999999999999654 466654   57899999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||+|+.......  .....+||+.|||||++.+ .+..++|+||+|+++++|.++..+
T Consensus       374 -------------~dg~vKL~DFGlAr~~~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          374 -------------ARQHARLIDFGSIVTTPQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             -------------TTSCEEECCCTTEESCC---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             -------------CCCCEEEeecccCeeCCCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence                         478899999999987654322  2345789999999998875 467789999999998887765443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=2.8e-30  Score=274.95  Aligned_cols=185  Identities=18%  Similarity=0.234  Sum_probs=146.0

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--------HHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--------HKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--------~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      ...++||+|+||.||+|..           .+..+|+|++.......        .+.+.+|+++|++++||||+++..+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-----------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~  407 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-----------LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIF  407 (540)
T ss_dssp             ---------CCEEEEEEEC-----------SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-----------CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEE
Confidence            3456899999999999954           35689999876543221        2347899999999999999976666


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +...+..|||||||++|+|.+++..         ++.++.||+.||.|||+++   ||||||||+|||++          
T Consensus       408 ~~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~----------  465 (540)
T 3en9_A          408 DVDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFD----------  465 (540)
T ss_dssp             EEETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEES----------
T ss_pred             EEeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEEC----------
Confidence            6678888999999999999999854         5689999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcce-----eeeeccccccccCCccccc--CCCCccccchhHHHHH
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVL  356 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~Gt~~y~aPE~~~~--~~~~~~~DIwSlGvil  356 (511)
                                      . .+||+|||+++.........     .....+||+.|||||++..  ..|+..+|+|+..+-.
T Consensus       466 ----------------~-~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~  528 (540)
T 3en9_A          466 ----------------K-DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILEL  528 (540)
T ss_dssp             ----------------S-SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHH
T ss_pred             ----------------C-eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHH
Confidence                            3 79999999999875532211     1235689999999999986  6788899999999999


Q ss_pred             HHHHhCCCCC
Q 010432          357 LEMLTGRRSM  366 (511)
Q Consensus       357 ~elltg~~pf  366 (511)
                      .+.+.++.+|
T Consensus       529 l~~v~~r~rY  538 (540)
T 3en9_A          529 MKDVERRARY  538 (540)
T ss_dssp             HHHHHTCSCC
T ss_pred             HHHHHhcccc
Confidence            9888877766

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=9.9e-26  Score=220.32  Aligned_cols=160  Identities=14%  Similarity=0.078  Sum_probs=123.8

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------------------cHHHHHHHHHH
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------------------GHKEWLAEVNF  188 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------------------~~~~~~~E~~i  188 (511)
                      ....|.+.+.||+|+||.||+|.+ .         +|+.||||+++.....                  ....+.+|+.+
T Consensus        88 ~~~~~~~~~~iG~G~~g~Vy~~~~-~---------~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~  157 (282)
T 1zar_A           88 SGKVDAIGKLMGEGKESAVFNCYS-E---------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRA  157 (282)
T ss_dssp             TTSCSEEEEEEEECSSEEEEEEEE-T---------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHH
T ss_pred             CCeEEEecCEeccCCCceEEEEEe-C---------CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHH
Confidence            345566779999999999999998 4         5789999999753221                  23458899999


Q ss_pred             HhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCC
Q 010432          189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS  268 (511)
Q Consensus       189 l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~  268 (511)
                      |++++  | +++++++.. +..|+|||||+||+|.+ +..       .....++.||+.||.|||+++   ||||||||+
T Consensus       158 l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~  222 (282)
T 1zar_A          158 LQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQY  222 (282)
T ss_dssp             HHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTT
T ss_pred             HHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHH
Confidence            99998  5 666665544 45699999999999988 421       224579999999999999999   999999999


Q ss_pred             cEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc--------
Q 010432          269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--------  340 (511)
Q Consensus       269 NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--------  340 (511)
                      |||++                          ++.+||+|||+|+.               +..|+|||++..        
T Consensus       223 NILl~--------------------------~~~vkl~DFG~a~~---------------~~~~~a~e~l~rdv~~i~~~  261 (282)
T 1zar_A          223 NVLVS--------------------------EEGIWIIDFPQSVE---------------VGEEGWREILERDVRNIITY  261 (282)
T ss_dssp             SEEEE--------------------------TTEEEECCCTTCEE---------------TTSTTHHHHHHHHHHHHHHH
T ss_pred             HEEEE--------------------------CCcEEEEECCCCeE---------------CCCCCHHHHHHHHHHHHHHH
Confidence            99997                          45699999999863               345789998753        


Q ss_pred             --CCCCccccchhH
Q 010432          341 --GHLTSRSDVYSF  352 (511)
Q Consensus       341 --~~~~~~~DIwSl  352 (511)
                        ..|+..+|+|.+
T Consensus       262 f~~~~~~~~~~~~~  275 (282)
T 1zar_A          262 FSRTYRTEKDINSA  275 (282)
T ss_dssp             HHHHHCCCCCHHHH
T ss_pred             HHHhcCCCCChHHH
Confidence              345566666643

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.85  E-value=3.2e-22  Score=192.95  Aligned_cols=137  Identities=18%  Similarity=0.061  Sum_probs=105.4

Q ss_pred             CCCCCccccCCCceEEEEEEcCCCCCCccCCCCcE--EEEEEecCCCccc------------------------HHHHHH
Q 010432          131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLT--VAVKTLNHDGLQG------------------------HKEWLA  184 (511)
Q Consensus       131 y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~--vAvK~~~~~~~~~------------------------~~~~~~  184 (511)
                      |.+.+.||+|+||.||+|.+..         +|..  ||||+++......                        ...+.+
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~---------~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVF---------DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK  119 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEE---------TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcC---------CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence            5678899999999999998843         4778  9999976542110                        125788


Q ss_pred             HHHHHhCCCCCCc--ceEeeEEEeCCeEEEEEEccCC-C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh-cCC
Q 010432          185 EVNFLGDLVHLNL--VKLIGYCIEDDQRLLVYEFMPR-G----SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH-EEA  256 (511)
Q Consensus       185 E~~il~~l~H~nI--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH-~~~  256 (511)
                      |+.+|.+|.|++|  ..++++    +..+|||||+.+ |    +|.+++..    .++..+..++.||+.||.||| +++
T Consensus       120 E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~g  191 (258)
T 1zth_A          120 EFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAE  191 (258)
T ss_dssp             HHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999988764  344432    356899999932 3    67766432    234567789999999999999 988


Q ss_pred             CCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccC
Q 010432          257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG  314 (511)
Q Consensus       257 ~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~  314 (511)
                         ||||||||+|||++                          . .++|+|||+|...
T Consensus       192 ---ivHrDlkp~NILl~--------------------------~-~~~liDFG~a~~~  219 (258)
T 1zth_A          192 ---LVHADLSEYNIMYI--------------------------D-KVYFIDMGQAVTL  219 (258)
T ss_dssp             ---EECSSCSTTSEEES--------------------------S-SEEECCCTTCEET
T ss_pred             ---EEeCCCCHHHEEEc--------------------------C-cEEEEECcccccC
Confidence               99999999999997                          3 7999999999764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.73  E-value=9.8e-19  Score=175.83  Aligned_cols=149  Identities=12%  Similarity=0.049  Sum_probs=100.8

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--------------cHHH--------HHHHHH
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--------------GHKE--------WLAEVN  187 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--------------~~~~--------~~~E~~  187 (511)
                      -|++..+||+|+||.||+|.+.          +|+.||||+++.....              ....        ..+|..
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~----------~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~  165 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE----------KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA  165 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT----------TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCEeeeCCceEEEEEECC----------CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence            3899999999999999999864          4789999998643110              0111        234667


Q ss_pred             HHhCCCCCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC
Q 010432          188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT  267 (511)
Q Consensus       188 il~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp  267 (511)
                      .|.+|.+.++....-+...  ..+|||||++|++|.++..     .  .....++.||+.+|.|||.++   ||||||||
T Consensus       166 nL~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH~~g---IVHrDLKp  233 (397)
T 4gyi_A          166 FMKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLAKHG---LIHGDFNE  233 (397)
T ss_dssp             HHHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHHHTT---EECSCCST
T ss_pred             HHHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHHHCC---CcCCCCCH
Confidence            7777754443222112122  2379999999988876532     1  224567899999999999998   99999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCC
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP  315 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~  315 (511)
                      .|||++..+.......               ....+.|+||+-+....
T Consensus       234 ~NILl~~dgd~~d~~~---------------~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          234 FNILIREEKDAEDPSS---------------ITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             TSEEEEEEECSSCTTS---------------EEEEEEECCCTTCEETT
T ss_pred             HHEEEeCCCCcccccc---------------cccceEEEEeCCcccCC
Confidence            9999986432110000               12248899999886543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.40  E-value=9e-13  Score=126.65  Aligned_cols=111  Identities=13%  Similarity=-0.061  Sum_probs=85.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~  205 (511)
                      ....|++...++.|+++.||++..           .+..+++|+...........+.+|+.+|+.|. |.++.++++++.
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~-----------~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~   80 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVG-----------ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER   80 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEEC-----------SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEEC-----------CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Confidence            345788888889999999999864           24589999987532122235788999999884 677889999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE  254 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~  254 (511)
                      ..+..|+||||++|.+|.+.+.      +......++.+++.+|..||+
T Consensus        81 ~~~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           81 HDGWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             ETTEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhC
Confidence            8889999999999999987631      112234678899999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.19  E-value=3.7e-11  Score=114.70  Aligned_cols=104  Identities=16%  Similarity=0.023  Sum_probs=71.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCC--cceEeeEEEeC
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN--LVKLIGYCIED  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~n--Iv~l~~~~~~~  207 (511)
                      .|.+..+.+.|..+.||++...          +|..|++|+.....   ...+.+|+.+|+.+.+.+  +.+++++...+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~----------~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~   87 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQ----------GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEA   87 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECT----------TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred             CCceEecccCCCCceEEEEecC----------CCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence            3443333345666999998642          35679999986542   234678999998885444  56688888877


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE  255 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~  255 (511)
                      +..++||||++|.+|.  ..    ...   ...++.+++..|..||+.
T Consensus        88 ~~~~~v~e~i~G~~l~--~~----~~~---~~~~~~~l~~~l~~lh~~  126 (264)
T 1nd4_A           88 GRDWLLLGEVPGQDLL--SS----HLA---PAEKVSIMADAMRRLHTL  126 (264)
T ss_dssp             SCEEEEEECCSSEETT--TS----CCC---HHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEEecCCcccC--cC----cCC---HhHHHHHHHHHHHHHhCC
Confidence            7889999999998884  21    111   235677788888888864

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.13  E-value=1.4e-10  Score=116.69  Aligned_cols=108  Identities=16%  Similarity=0.179  Sum_probs=77.9

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEec--CCCc-ccHHHHHHHHHHHhCCC--CCCcceEeeEEEeC
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGL-QGHKEWLAEVNFLGDLV--HLNLVKLIGYCIED  207 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~--~~~~-~~~~~~~~E~~il~~l~--H~nIv~l~~~~~~~  207 (511)
                      .++.|+.|.++.||+....           +..+++|+..  .... .....+.+|+.+|+.|.  +..+.+++.++.+.
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-----------~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~  110 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-----------GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE  110 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-----------SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT
T ss_pred             eEEEcCCcccceEEEEEEC-----------CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC
Confidence            3567899999999998753           3478888876  3321 22345778999999886  45688899888765


Q ss_pred             ---CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 010432          208 ---DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE  254 (511)
Q Consensus       208 ---~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~  254 (511)
                         +..|+||||++|..|.+..   ...++......++.+++..|..||.
T Consensus       111 ~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          111 SVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             TTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence               3479999999988775421   1246778888899999999999997

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.00  E-value=2.6e-10  Score=111.95  Aligned_cols=185  Identities=19%  Similarity=0.202  Sum_probs=118.6

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCC-CCCC--cceEeeEEEeCC--
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL-VHLN--LVKLIGYCIEDD--  208 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~H~n--Iv~l~~~~~~~~--  208 (511)
                      ++.++.|.+..||+..              ..+++|+....  .....+.+|+.+|+.| .+..  +.+++......+  
T Consensus        25 i~~~~~G~~n~v~~v~--------------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~   88 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN--------------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETY   88 (304)
T ss_dssp             CCEEEECSSEEEEEST--------------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSC
T ss_pred             eEecCCCCcceEEEEC--------------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCC
Confidence            4568999999999862              35889986533  2235688999999887 3332  345554433332  


Q ss_pred             -eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------
Q 010432          209 -QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA-------------------------------  256 (511)
Q Consensus       209 -~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~-------------------------------  256 (511)
                       ..|+|||+++|.+|.....   ..++......++.+++..|..||+..                               
T Consensus        89 ~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (304)
T 3sg8_A           89 QMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSREL  165 (304)
T ss_dssp             SCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTS
T ss_pred             CcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccC
Confidence             3479999999988865432   24566777788888888888888511                               


Q ss_pred             ------------------------CCCeEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcc
Q 010432          257 ------------------------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK  312 (511)
Q Consensus       257 ------------------------~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~  312 (511)
                                              ...++|+|++|.|||++..                       ....+.|+||+.+.
T Consensus       166 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-----------------------~~~~~~~iD~~~~~  222 (304)
T 3sg8_A          166 KGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-----------------------KNTICGIIDFGDAA  222 (304)
T ss_dssp             CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-----------------------TTEEEEECCCTTCE
T ss_pred             CcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-----------------------CCCEEEEEeCCCCc
Confidence                                    1348999999999999831                       03457899999987


Q ss_pred             cCCCCCcceeeeeccccccc---cCCccccc-----C---------CCCccccchhHHHHHHHHHhCCCCC
Q 010432          313 DGPEGDKTHVSTRVMGTYGY---AAPEYVMT-----G---------HLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       313 ~~~~~~~~~~~~~~~Gt~~y---~aPE~~~~-----~---------~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                      .......      ......+   ..|+.+..     +         ....-.+.|++|.++|.+.+|..+|
T Consensus       223 ~~~~~~D------l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          223 ISDPDND------FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             EECTTHH------HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cCChHHH------HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            5322100      0001111   12221110     0         0112358999999999999998766

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.43  E-value=1e-06  Score=84.33  Aligned_cols=102  Identities=16%  Similarity=0.045  Sum_probs=66.7

Q ss_pred             ccccCCCc-eEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEEE
Q 010432          136 LLGEGGFG-CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       136 ~lG~G~fg-~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~lv  213 (511)
                      .+..|..| .||+.....         .+..+++|+-...   ....+.+|..+|+.|. +-.+.++++++.+++..|+|
T Consensus        31 ~~~~G~S~~~v~rl~~~~---------~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lv   98 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKP---------NAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLL   98 (272)
T ss_dssp             EEECSSSSCEEEEEECCT---------TCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             EccCCCcCCeEEEEEecC---------CCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEE
Confidence            34555555 689876543         3557889987543   2346778999998773 44477889999999999999


Q ss_pred             EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 010432          214 YEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE  254 (511)
Q Consensus       214 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~  254 (511)
                      ||+++|.++.+.....     ......++.+++..|.-||.
T Consensus        99 me~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A           99 TTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             EECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHT
T ss_pred             EEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcC
Confidence            9999998876654221     11222344455555555553

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.41  E-value=1.2e-06  Score=85.81  Aligned_cols=102  Identities=21%  Similarity=0.132  Sum_probs=64.6

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC---CcceEeeEEE-eCCe
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL---NLVKLIGYCI-EDDQ  209 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~---nIv~l~~~~~-~~~~  209 (511)
                      ++.++.|....||+.              +..+++|+-..  ......+.+|+.+|+.|.+.   .+.+.+.+.. ..+.
T Consensus        24 v~~l~~G~~n~v~~v--------------g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~   87 (306)
T 3tdw_A           24 VESLGEGFRNYAILV--------------NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGN   87 (306)
T ss_dssp             EEEEEECSSEEEEEE--------------TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSC
T ss_pred             eeecCCCcceeEEEE--------------CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCc
Confidence            356888888899987              23578888532  12235678999999998652   3566676664 3456


Q ss_pred             EEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 010432          210 RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE  254 (511)
Q Consensus       210 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~  254 (511)
                      .++||||++|..|......   .++......++.+++..|..||+
T Consensus        88 ~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           88 PFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             EEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhc
Confidence            7899999999887653211   23344444444555555554443

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.24  E-value=3.1e-06  Score=85.95  Aligned_cols=76  Identities=13%  Similarity=0.063  Sum_probs=49.2

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-------ccHHHHHHHHHHHhCCCC--CC-cceEeeE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-------QGHKEWLAEVNFLGDLVH--LN-LVKLIGY  203 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~E~~il~~l~H--~n-Iv~l~~~  203 (511)
                      .+.||.|.++.||++....         .+..|+||.......       .....+..|+++|+.+..  +. +.+++.+
T Consensus        35 ~~~lg~G~~n~vyrv~~~~---------~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~  105 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQE---------HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS  105 (397)
T ss_dssp             EEECCSSSSEEEEEEEC-------------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE
T ss_pred             EEECCCCceEEEEEEEECC---------CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE
Confidence            4579999999999996543         356899998653211       122456789988887632  33 4456543


Q ss_pred             EEeCCeEEEEEEccCCC
Q 010432          204 CIEDDQRLLVYEFMPRG  220 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g  220 (511)
                        +.+..++||||+++.
T Consensus       106 --d~~~~~lvmE~l~g~  120 (397)
T 2olc_A          106 --DTEMAVTVMEDLSHL  120 (397)
T ss_dssp             --ETTTTEEEECCCTTS
T ss_pred             --cCCccEEEEEeCCCc
Confidence              455568999999764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.23  E-value=1.3e-06  Score=87.28  Aligned_cols=86  Identities=2%  Similarity=-0.118  Sum_probs=53.8

Q ss_pred             Ccc-ccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCC-C--CCcceEeeEEEeC
Q 010432          135 SLL-GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLV-H--LNLVKLIGYCIED  207 (511)
Q Consensus       135 ~~l-G~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~-H--~nIv~l~~~~~~~  207 (511)
                      +.| +.|....+|+.........   ...+..+++|+.....   ......+.+|+.+|+.|. +  ..+.+++.++.+.
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~---~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDG---RSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETT---EEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EECCCCCccceEEEEEEecccCC---CCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            467 8888899998865300000   0014578899865432   111134678888888873 2  3567788877554


Q ss_pred             ---CeEEEEEEccCCCCHH
Q 010432          208 ---DQRLLVYEFMPRGSLE  223 (511)
Q Consensus       208 ---~~~~lv~E~~~~g~L~  223 (511)
                         +..|+||||++|..|.
T Consensus       103 ~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          103 DVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTTSSCEEEEECCCCBCCC
T ss_pred             CccCCceEEEEecCCCChh
Confidence               3468999999886654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.03  E-value=3.2e-05  Score=76.30  Aligned_cols=73  Identities=15%  Similarity=0.224  Sum_probs=41.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-----CCCcceEe-e--EEEe
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-----HLNLVKLI-G--YCIE  206 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----H~nIv~l~-~--~~~~  206 (511)
                      +.|+.|..+.||+....           +..+++|+....    ...+..|+.+++.|.     .|.++... |  +...
T Consensus        38 ~~l~gG~~n~~~~v~~~-----------~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~  102 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD-----------SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKH  102 (346)
T ss_dssp             EECC----CEEEEEEET-----------TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEE
T ss_pred             eeccccccCcEEEEEeC-----------CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEE
Confidence            34666778999998753           235899998752    233445555555442     34443311 1  2234


Q ss_pred             CCeEEEEEEccCCCCH
Q 010432          207 DDQRLLVYEFMPRGSL  222 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L  222 (511)
                      .+..++||+|++|..+
T Consensus       103 ~~~~~~l~~~i~G~~~  118 (346)
T 2q83_A          103 GSFLFVVYDWIEGRPF  118 (346)
T ss_dssp             TTEEEEEEECCCCBCC
T ss_pred             CCEEEEEEEeecCccC
Confidence            6778999999988654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.80  E-value=0.00013  Score=71.29  Aligned_cols=75  Identities=19%  Similarity=0.122  Sum_probs=58.6

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC---CCCcceEeeEEEeCCeE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV---HLNLVKLIGYCIEDDQR  210 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---H~nIv~l~~~~~~~~~~  210 (511)
                      .+.|+.|.+..+|+...           .+..+++|+....   ....+..|+..|+.|.   ...+.+++.+....+..
T Consensus        41 ~~~l~gG~~n~~y~v~~-----------~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~  106 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-----------EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHS  106 (312)
T ss_dssp             EEEECCSSSSEEEEEES-----------SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEE
T ss_pred             eEEeCCccceeeeEEEE-----------CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCce
Confidence            45689999999999864           2457889987643   2456788999888873   35688899888878889


Q ss_pred             EEEEEccCCCCH
Q 010432          211 LLVYEFMPRGSL  222 (511)
Q Consensus       211 ~lv~E~~~~g~L  222 (511)
                      ++||||+++..+
T Consensus       107 ~lvme~l~G~~~  118 (312)
T 3jr1_A          107 FLLLEALNKSKN  118 (312)
T ss_dssp             EEEEECCCCCCC
T ss_pred             EEEEEeccCCCC
Confidence            999999998754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.60  E-value=0.00021  Score=72.96  Aligned_cols=73  Identities=12%  Similarity=0.100  Sum_probs=43.9

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC------C-c--ccHHHHHHHHHHHh-CCCCCCcceEeeE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD------G-L--QGHKEWLAEVNFLG-DLVHLNLVKLIGY  203 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~------~-~--~~~~~~~~E~~il~-~l~H~nIv~l~~~  203 (511)
                      .+.||.|..+.||++..           .+..++||.....      . .  .....+..|+..+. ......+.+++.+
T Consensus        39 i~~l~~G~~n~vyrv~~-----------~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~  107 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG-----------SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHF  107 (420)
T ss_dssp             EEECCCSSSCEEEEEEC-----------SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEE
T ss_pred             EEEccCCCcEEEEEEEc-----------CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEE
Confidence            45789999999999853           2457999943211      1 0  12223333333222 1223456677766


Q ss_pred             EEeCCeEEEEEEcc-CC
Q 010432          204 CIEDDQRLLVYEFM-PR  219 (511)
Q Consensus       204 ~~~~~~~~lv~E~~-~~  219 (511)
                      .  .+..++||||+ ++
T Consensus       108 ~--~~~~~lv~e~l~~g  122 (420)
T 2pyw_A          108 D--RTMALIGMRYLEPP  122 (420)
T ss_dssp             E--TTTTEEEECCCCTT
T ss_pred             C--CCccEEEEeecCCc
Confidence            5  56679999999 76

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.39  E-value=0.00089  Score=64.41  Aligned_cols=79  Identities=19%  Similarity=0.157  Sum_probs=55.6

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-C--CCcceEeeEEEe
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H--LNLVKLIGYCIE  206 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H--~nIv~l~~~~~~  206 (511)
                      ...-++.+|.|..+.||+.+..          +|+.|.+|+-..........|..|+..|+.|. .  -.+.+++++  .
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~----------DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~   83 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA----------DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D   83 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET----------TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E
T ss_pred             CeEEEEecCCCCCeEEEEEEEC----------CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c
Confidence            4445567999999999999875          37789999876554443445778999888773 2  234555554  2


Q ss_pred             CCeEEEEEEccCCCCH
Q 010432          207 DDQRLLVYEFMPRGSL  222 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L  222 (511)
                      .  .++||||++++..
T Consensus        84 ~--~~lv~e~l~~~~~   97 (288)
T 3f7w_A           84 D--RTLAMEWVDERPP   97 (288)
T ss_dssp             T--TEEEEECCCCCCC
T ss_pred             C--ceEEEEeecccCC
Confidence            2  4789999987643

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.37  E-value=0.00071  Score=66.11  Aligned_cols=88  Identities=7%  Similarity=-0.036  Sum_probs=47.8

Q ss_pred             hHHHHHHhcCCCC-----CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCC
Q 010432          121 FNDLKLATRNFRP-----ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL  195 (511)
Q Consensus       121 ~~~~~~~~~~y~~-----~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~  195 (511)
                      .+++......|.+     ++.|+.|....||+.....          | .+++|+......  ...+..|+.++..|...
T Consensus         9 ~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~----------g-~~vlk~~~~~~~--~~~l~~e~~~l~~L~~~   75 (322)
T 2ppq_A            9 EDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK----------D-PLILTLYEKRVE--KNDLPFFLGLMQHLAAK   75 (322)
T ss_dssp             HHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS----------C-CEEEEEECC-----CCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC----------c-cEEEEEeCCCCC--HHHHHHHHHHHHHHHHC
Confidence            3344444444544     2356778888999987532          3 588998875311  13455677777666311


Q ss_pred             C--cceEee------EEEeCCeEEEEEEccCCCC
Q 010432          196 N--LVKLIG------YCIEDDQRLLVYEFMPRGS  221 (511)
Q Consensus       196 n--Iv~l~~------~~~~~~~~~lv~E~~~~g~  221 (511)
                      .  +.+++.      +....+..++||+|++|..
T Consensus        76 g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~  109 (322)
T 2ppq_A           76 GLSCPLPLPRKDGELLGELSGRPAALISFLEGMW  109 (322)
T ss_dssp             TCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBC
T ss_pred             CCCCCcccCCCCCCEEEEECCEEEEEEEeCCCcC
Confidence            1  233332      1223466789999998754

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.09  E-value=0.002  Score=58.64  Aligned_cols=98  Identities=15%  Similarity=0.091  Sum_probs=60.9

Q ss_pred             CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccccccccccc
Q 010432          221 SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD  300 (511)
Q Consensus       221 ~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (511)
                      +|.+.|...+.++++++++.++.|.+.+|.-+-....+  ..+=+-|..|+|..                         +
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~-------------------------d   86 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWR-------------------------D   86 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEET-------------------------T
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEec-------------------------C
Confidence            79999988889999999999999999988766211100  12223457777763                         5


Q ss_pred             CceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       301 ~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                      +.|.+.+ +.+.              .....+.|||... ...+.+.=|||||++||.-+-
T Consensus        87 G~V~f~~-~~s~--------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           87 GAVTLAP-AADD--------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             SCEEECC-C--------------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             Cceeccc-cccc--------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            5565543 1110              1123467888653 345677889999999999885

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.07  E-value=0.0029  Score=61.88  Aligned_cols=75  Identities=15%  Similarity=0.087  Sum_probs=47.3

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC--CCcceEeeE-----EEeC
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH--LNLVKLIGY-----CIED  207 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--~nIv~l~~~-----~~~~  207 (511)
                      ..|+ |....||+....          .|..+++|+...... ....+..|+.++..|..  -.+++++..     ....
T Consensus        32 ~~l~-g~~n~~y~v~~~----------~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~   99 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE----------DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQ   99 (328)
T ss_dssp             EEEC-CSSSEEEEECCT----------TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEET
T ss_pred             Eeec-CcccceEEEEcC----------CCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEEC
Confidence            3566 888899987542          255799999874322 23566778888877632  123444432     2235


Q ss_pred             CeEEEEEEccCCCC
Q 010432          208 DQRLLVYEFMPRGS  221 (511)
Q Consensus       208 ~~~~lv~E~~~~g~  221 (511)
                      +..++||+|++|..
T Consensus       100 g~~~~l~~~i~G~~  113 (328)
T 1zyl_A          100 GFYFAVFPSVGGRQ  113 (328)
T ss_dssp             TEEEEEEECCCCEE
T ss_pred             CEEEEEEEecCCCC
Confidence            56789999998743

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.97  E-value=0.0022  Score=62.04  Aligned_cols=71  Identities=7%  Similarity=0.054  Sum_probs=43.9

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLL  212 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~l  212 (511)
                      ++.|+.|....+|+.   .            .+++|+........ ....+|+.+++.+....+ .+++++  +.+.-++
T Consensus        23 i~~l~gG~tN~~~~~---~------------~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~   84 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA---G------------DLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVM   84 (301)
T ss_dssp             CEEEESCSSEEEEEE---T------------TEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCE
T ss_pred             eeEcCCcccccccee---e------------eEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEE
Confidence            678999999999998   1            48888876532111 122467777776632223 455554  3444578


Q ss_pred             EEEcc-CCCCH
Q 010432          213 VYEFM-PRGSL  222 (511)
Q Consensus       213 v~E~~-~~g~L  222 (511)
                      |+||+ +|-+|
T Consensus        85 v~e~i~~g~~l   95 (301)
T 3dxq_A           85 VTRYIAGAQTM   95 (301)
T ss_dssp             EEECCTTCEEC
T ss_pred             EEeecCCCccC
Confidence            99999 65444

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.91  E-value=0.0055  Score=60.09  Aligned_cols=76  Identities=11%  Similarity=-0.014  Sum_probs=37.5

Q ss_pred             CccccCCCce-EEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC--CCCcceEeeEEEeCCeEE
Q 010432          135 SLLGEGGFGC-VFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV--HLNLVKLIGYCIEDDQRL  211 (511)
Q Consensus       135 ~~lG~G~fg~-V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~--H~nIv~l~~~~~~~~~~~  211 (511)
                      +.|+.|+... +|+....          .+..+++|.......   ..+..|+.++..|.  .-.+.+++.+....  -+
T Consensus        24 ~~l~gg~s~~~~~r~~~~----------~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~   88 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSP----------TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GL   88 (333)
T ss_dssp             CC--------CCEEEECT----------TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TE
T ss_pred             eECCCCCCCceEEEEEcC----------CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CE
Confidence            3565554443 6676531          145677776544321   12345666666653  22355677653323  37


Q ss_pred             EEEEccCCCCHHHH
Q 010432          212 LVYEFMPRGSLENH  225 (511)
Q Consensus       212 lv~E~~~~g~L~~~  225 (511)
                      +|||++.+..+.++
T Consensus        89 ll~e~l~~~~l~~~  102 (333)
T 3csv_A           89 LLIEDLGDALFTEV  102 (333)
T ss_dssp             EEECCCCSCBHHHH
T ss_pred             EEEeeCCCcchHHH
Confidence            89999976666543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.88  E-value=0.0019  Score=66.03  Aligned_cols=80  Identities=18%  Similarity=0.105  Sum_probs=50.0

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLL  212 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~l  212 (511)
                      ++.|+.|....||++........  ....+..|++|+.....  ....+.+|+.+++.|...++ .++++.+.  +  .+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~--~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~  149 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPP--IRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GR  149 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCC--SSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EE
T ss_pred             EEEeCCCcccceEEEEeCCCccc--cCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CE
Confidence            35688888899999976421100  00124689999884321  12456689999988843333 56776543  2  38


Q ss_pred             EEEccCCCC
Q 010432          213 VYEFMPRGS  221 (511)
Q Consensus       213 v~E~~~~g~  221 (511)
                      ||||++|-+
T Consensus       150 v~e~l~G~~  158 (429)
T 1nw1_A          150 LEEYIPSRP  158 (429)
T ss_dssp             EECCCCEEE
T ss_pred             EEEEeCCcc
Confidence            999997633

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.81  E-value=0.0033  Score=63.02  Aligned_cols=81  Identities=15%  Similarity=0.101  Sum_probs=45.5

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.|..|-...+|++.......  .....+..|++|+.... ......+.+|..+++.|. +.-..++++++.  +  .+|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~--~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v  128 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLP--SVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRL  128 (379)
T ss_dssp             EEC-----CCEEEEECCTTSC--CCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred             EEcCCcccccEEEEEeCCCcc--ccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccE
Confidence            467778888999987642100  00113468999986332 233456678999998873 322356666553  3  289


Q ss_pred             EEccCCCCH
Q 010432          214 YEFMPRGSL  222 (511)
Q Consensus       214 ~E~~~~g~L  222 (511)
                      |||++|.+|
T Consensus       129 ~e~i~G~~l  137 (379)
T 3feg_A          129 EQYIPSRPL  137 (379)
T ss_dssp             EECCSEEEC
T ss_pred             EEEecCccC
Confidence            999987544

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.61  E-value=0.0079  Score=61.85  Aligned_cols=74  Identities=14%  Similarity=0.028  Sum_probs=46.0

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-ceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-VKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-v~l~~~~~~~~~~~lv  213 (511)
                      +.|+.|-...+|++....         .+..|++|+....... .-...+|+.+|..|...++ .++++++  .+  .+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~---------~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v  179 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMS---------KQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRI  179 (458)
T ss_dssp             EEECC--CEEEEEEEETT---------TTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEE
T ss_pred             EEcCCCeEeEEEEEEECC---------CCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEE
Confidence            467888889999997642         2367889987543211 1112478888888864444 5677766  23  359


Q ss_pred             EEccCCCCH
Q 010432          214 YEFMPRGSL  222 (511)
Q Consensus       214 ~E~~~~g~L  222 (511)
                      |||++|-+|
T Consensus       180 ~e~I~G~~l  188 (458)
T 2qg7_A          180 EEFMDGYAL  188 (458)
T ss_dssp             EECCCSEEC
T ss_pred             EEeeCCccC
Confidence            999987443

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.51  E-value=0.0038  Score=62.28  Aligned_cols=81  Identities=9%  Similarity=0.028  Sum_probs=43.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCC-cceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~n-Iv~l~~~~~~~~~~~lv  213 (511)
                      ..|+.|....||+......... ..+..+..|++|+....... ......|..+++.|...+ +.++++.+  .  -++|
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~-~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v  112 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETAN-NYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI  112 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHT-TCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcc-cccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence            4678888889999876421000 00011357888887543211 112357888887774333 44666544  2  2689


Q ss_pred             EEccCCCC
Q 010432          214 YEFMPRGS  221 (511)
Q Consensus       214 ~E~~~~g~  221 (511)
                      |||++|..
T Consensus       113 ~e~i~G~~  120 (369)
T 3c5i_A          113 EEWLYGDP  120 (369)
T ss_dssp             EECCCSEE
T ss_pred             EEEecCCc
Confidence            99998754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.32  E-value=0.03  Score=55.06  Aligned_cols=68  Identities=10%  Similarity=0.024  Sum_probs=40.7

Q ss_pred             ccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC---CCCcceEeeE------EEeCC
Q 010432          138 GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV---HLNLVKLIGY------CIEDD  208 (511)
Q Consensus       138 G~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---H~nIv~l~~~------~~~~~  208 (511)
                      |.|....||+....          .| .+++|+......      ..|+.++..|.   -+++.+.+..      ....+
T Consensus        32 G~g~~N~vy~v~~~----------~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g   94 (339)
T 3i1a_A           32 GADTNAFAYQADSE----------SK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKH   94 (339)
T ss_dssp             TSCSSCEEEEEECS----------SC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSS
T ss_pred             cCccccceEEEEeC----------CC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECC
Confidence            34446789998643          24 799998765442      24555554442   1224444421      23356


Q ss_pred             eEEEEEEccCCCCH
Q 010432          209 QRLLVYEFMPRGSL  222 (511)
Q Consensus       209 ~~~lv~E~~~~g~L  222 (511)
                      ..++||+|++|..+
T Consensus        95 ~~~~l~~~i~G~~~  108 (339)
T 3i1a_A           95 FKIIAYPFIHAPNG  108 (339)
T ss_dssp             EEEEEEECCCCCBT
T ss_pred             EEEEEEeccCCCcC
Confidence            78999999988655

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=93.64  E-value=0.18  Score=51.09  Aligned_cols=81  Identities=11%  Similarity=-0.008  Sum_probs=47.1

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.|..|-...+|+.........  ....+..|++|+....... .-+..+|..+++.|. +.-..++++.+  .+  ++|
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~--~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I  148 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMS--LSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRI  148 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-------CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred             EEcCCCcccceEEEEeCCCccc--ccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEE
Confidence            4577788889999987521100  0012568999986543211 112347888887774 22245666533  22  789


Q ss_pred             EEccCCCCH
Q 010432          214 YEFMPRGSL  222 (511)
Q Consensus       214 ~E~~~~g~L  222 (511)
                      |||++|.+|
T Consensus       149 ~efI~G~~l  157 (424)
T 3mes_A          149 EEFIDGEPL  157 (424)
T ss_dssp             EECCCSEEC
T ss_pred             EEEeCCccC
Confidence            999988553

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.42  E-value=0.061  Score=55.31  Aligned_cols=63  Identities=8%  Similarity=0.083  Sum_probs=19.1

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEE------EEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV------KTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAv------K~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      .+.+.||   ||.||+|.+..         ....|||      |.++.....  ....+.+|..++..++|+|+++.+++
T Consensus       145 ~l~~~lG---fG~v~~g~~~~---------~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f  212 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYK---------KHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNF  212 (463)
T ss_dssp             CSTTTSS---BCCC------------------CCBGGGC-----------------------------------CBCCCE
T ss_pred             cccccCC---chhhhcccccc---------cCCchhhhhccCccccccccccccccccccccccccccccccccCCCcce
Confidence            4556777   99999998854         1236888      766543322  22458889999999999999999987


Q ss_pred             EEe
Q 010432          204 CIE  206 (511)
Q Consensus       204 ~~~  206 (511)
                      ...
T Consensus       213 ~~~  215 (463)
T 3cxl_A          213 KVH  215 (463)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            654

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=85.91  E-value=0.33  Score=48.72  Aligned_cols=35  Identities=26%  Similarity=0.233  Sum_probs=25.1

Q ss_pred             eEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCccc
Q 010432          260 VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD  313 (511)
Q Consensus       260 iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~  313 (511)
                      ++|+|+.+.|||+......                   .++..+.++||-.|..
T Consensus       246 fcHnDl~~gNil~~~~~~~-------------------~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGREN-------------------SEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGG-------------------CSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCccc-------------------CcCCeEEEechHhccC
Confidence            5799999999999532110                   0356799999988753

>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}

Probab=80.29  E-value=0.31  Score=37.20  Aligned_cols=28  Identities=14%  Similarity=-0.101  Sum_probs=24.4

Q ss_pred             ccccccccccchhhhhhhcccccccccc
Q 010432            8 GKVKKASWDSSKSKAKKKKKKVEDEVEV   35 (511)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~   35 (511)
                      +++++.|+|++|++|++.||+.+.+.+.
T Consensus        48 g~~~~~G~G~SKK~AEq~AA~~AL~~L~   75 (85)
T 2khx_A           48 GERIGCGKGPSIQQAEMGAAMDALEKYN   75 (85)
T ss_dssp             TEECCCEEESSHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence            4778999999999999999998887663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	511
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-70
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-63
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-62
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-62
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-62
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-60
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-60
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-60
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-59
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-59
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-59
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-58
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-58
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-58
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-57
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-57
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-56
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-56
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-56
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-55
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-55
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-55
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-55
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-54
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-54
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	9e-53
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-52
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-51
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-51
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-50
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-50
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-50
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-49
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-48
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-45
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-45
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-45
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-44
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-43
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-43
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-43
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-42
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-40
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-40
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-40
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-39
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-39
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-39
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-38
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-37
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-37
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-37
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-34
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-33
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-32
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-32
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-31
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-29
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-27
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-25
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-24
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-12

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  223 bits (570), Expect = 3e-70
 Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 58/315 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVN 187
                  +G G FG V+KG                 VAVK LN      Q  + +  EV 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHG------------DVAVKMLNVTAPTPQQLQAFKNEVG 56

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            L    H+N++  +GY     Q  +V ++    SL +HL            + IA   A+
Sbjct: 57  VLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+ +LH    + +I+RD K++NI L                          +D   K+ D
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLH-------------------------EDLTVKIGD 147

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLTGRR 364
           FGLA        +H   ++ G+  + APE +        + +SDVY+FG+VL E++TG+ 
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ- 206

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                 P    N  +     +G       L   ++  +      +   +L A CL +   
Sbjct: 207 -----LPYSNINNRDQIIFMVGRGYLSPDL--SKVRSNCP----KAMKRLMAECLKKKRD 255

Query: 425 ARPLMSEVVEALKPL 439
            RPL  +++ +++ L
Sbjct: 256 ERPLFPQILASIELL 270

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  205 bits (522), Expect = 6e-63
 Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 63/334 (18%)

Query: 119 FTFNDLKLATRNFRPE---------SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
           FTF D   A R F  E          ++G G FG V  G ++  G         + VA+K
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPG------KREIFVAIK 60

Query: 170 TLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
           TL      +  +++L+E + +G   H N++ L G   +    +++ EFM  GSL++ L +
Sbjct: 61  TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 120

Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
                     + +  G A G+ +L    +   ++RD    NIL+++              
Sbjct: 121 NDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNS-------------- 163

Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRV---MGTYGYAAPEYVMTGHLTS 345
                      +   K+SDFGL++   +       T          + APE +     TS
Sbjct: 164 -----------NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 212

Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
            SDV+S+G+V+ E+++        RP  +    +               I+        +
Sbjct: 213 ASDVWSYGIVMWEVMSYGE-----RPYWDMTNQDV-----------INAIEQDYRLPPPM 256

Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
                  QL   C  +D   RP   ++V  L  +
Sbjct: 257 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (519), Expect = 2e-62
 Identities = 85/351 (24%), Positives = 137/351 (39%), Gaps = 61/351 (17%)

Query: 104 SKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTG 163
           S L  EL  A +      + L +   +F    ++G G FGCV+ G + +N       G  
Sbjct: 7   SALNPELVQAVQHVVIGPSSLIV---HF--NEVIGRGHFGCVYHGTLLDND------GKK 55

Query: 164 LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR-LLVYEFMPRGS 221
           +  AVK+LN     G   ++L E   + D  H N++ L+G C+  +   L+V  +M  G 
Sbjct: 56  IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD 115

Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
           L N +   +        +   L  AKG+ FL     +  ++RD    N +LD        
Sbjct: 116 LRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLD-------- 164

Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPEYVM 339
                            + +  K++DFGLA+D    E D  H  T       + A E + 
Sbjct: 165 -----------------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 207

Query: 340 TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL 399
           T   T++SDV+SFGV+L E++T         P  + N  +     L    +  RL+ P  
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGA-----PPYPDVNTFDITVYLL----QGRRLLQPEY 258

Query: 400 EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSY 450
                        ++   C     + RP  SE+V  +  +          Y
Sbjct: 259 C-------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI--FSTFIGEHY 300

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (514), Expect = 3e-62
 Identities = 77/310 (24%), Positives = 125/310 (40%), Gaps = 56/310 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
                  +G G FG V  G+                VA+KT+        ++++ E   +
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWL----------NKDKVAIKTIREGA-MSEEDFIEEAEVM 54

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
             L H  LV+L G C+E     LV+EFM  G L ++L  +         + + L   +G+
Sbjct: 55  MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 114

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
           A+L    E  VI+RD    N L+                          ++   K+SDFG
Sbjct: 115 AYLE---EACVIHRDLAARNCLVG-------------------------ENQVIKVSDFG 146

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           + +   + D+   ST       +A+PE       +S+SDV+SFGV++ E+ +  +   +N
Sbjct: 147 MTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
           R N E  +VE            +RL  PRL        +    Q+  HC    P+ RP  
Sbjct: 206 RSNSE--VVEDI-------STGFRLYKPRLA-------STHVYQIMNHCWKERPEDRPAF 249

Query: 430 SEVVEALKPL 439
           S ++  L  +
Sbjct: 250 SRLLRQLAEI 259

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (511), Expect = 8e-62
 Identities = 56/309 (18%), Positives = 107/309 (34%), Gaps = 56/309 (18%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           ++      LG G FG V  G                 VA+K +         E++ E   
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKEGS-MSEDEFIEEAKV 52

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           + +L H  LV+L G C +     ++ E+M  G L N+L            +++     + 
Sbjct: 53  MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 112

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +L     +  ++RD    N L++                              K+SDF
Sbjct: 113 MEYLE---SKQFLHRDLAARNCLVND-------------------------QGVVKVSDF 144

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           GL++   + D+   S        ++ PE +M    +S+SD+++FGV++ E+ +  +   +
Sbjct: 145 GLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203

Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
              N E                    I   L  +     ++K   +   C       RP 
Sbjct: 204 RFTNSE----------------TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT 247

Query: 429 MSEVVEALK 437
              ++  + 
Sbjct: 248 FKILLSNIL 256

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (505), Expect = 5e-60
 Identities = 67/338 (19%), Positives = 124/338 (36%), Gaps = 68/338 (20%)

Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEW 182
           ++L   +F   S LG G  G VFK              +GL +A K ++ +       + 
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKV---------SHKPSGLVMARKLIHLEIKPAIRNQI 51

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           + E+  L +     +V   G    D +  +  E M  GSL+  L +    +P  I  K++
Sbjct: 52  IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVS 110

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
           +   KGL +L E+    +++RD K SNIL++                             
Sbjct: 111 IAVIKGLTYLREKH--KIMHRDVKPSNILVN-------------------------SRGE 143

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            KL DFG++    +     ++   +GT  Y +PE +   H + +SD++S G+ L+EM  G
Sbjct: 144 IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

Query: 363 RR--------------------------SMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
           R                              +       +    +RP +        +++
Sbjct: 200 RYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVN 259

Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                  S   + +       CL ++P  R  + +++ 
Sbjct: 260 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (499), Expect = 7e-60
 Identities = 76/311 (24%), Positives = 123/311 (39%), Gaps = 58/311 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
             +    LG G FG V+ G+                VAVK+L          +LAE N +
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYN----------GHTKVAVKSLKQGS-MSPDAFLAEANLM 62

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKG 248
             L H  LV+L       +   ++ E+M  GSL + L   S + L  +  + +A   A+G
Sbjct: 63  KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           +AF+ E   R  I+RD + +NIL+                             + K++DF
Sbjct: 122 MAFIEE---RNYIHRDLRAANILV-------------------------SDTLSCKIADF 153

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           GLA+   + ++            + APE +  G  T +SDV+SFG++L E++T  R    
Sbjct: 154 GLARLIED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR---- 208

Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
             P       E  +       R YR++ P    +      ++  QL   C    P+ RP 
Sbjct: 209 -IPYPGMTNPEVIQNL----ERGYRMVRPD---NCP----EELYQLMRLCWKERPEDRPT 256

Query: 429 MSEVVEALKPL 439
              +   L+  
Sbjct: 257 FDYLRSVLEDF 267

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  196 bits (500), Expect = 8e-60
 Identities = 69/324 (21%), Positives = 131/324 (40%), Gaps = 56/324 (17%)

Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
               ++  ++   +   +  LG G +G V++G         V     LTVAVKTL  D +
Sbjct: 5   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTM 55

Query: 177 QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPW 235
           +  +E+L E   + ++ H NLV+L+G C  +    ++ EFM  G+L ++L   +   +  
Sbjct: 56  EV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 114

Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
            + + +A   +  + +L +   +  I+RD    N L+                       
Sbjct: 115 VVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG---------------------- 149

Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
              +++  K++DFGL++    GD             + APE +     + +SDV++FGV+
Sbjct: 150 ---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 205

Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLA 415
           L E+ T   S        +                 Y L++            +K  +L 
Sbjct: 206 LWEIATYGMSPYPGIDLSQ----------------VYELLEKDYRMERPEGCPEKVYELM 249

Query: 416 AHCLSRDPKARPLMSEVVEALKPL 439
             C   +P  RP  +E+ +A + +
Sbjct: 250 RACWQWNPSDRPSFAEIHQAFETM 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (495), Expect = 5e-59
 Identities = 69/335 (20%), Positives = 120/335 (35%), Gaps = 56/335 (16%)

Query: 123 DLKLATRNFRPESL-LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-K 180
            L L   N     + LG G FG V +G               + VA+K L     +   +
Sbjct: 2   KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKK-------QIDVAIKVLKQGTEKADTE 54

Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           E + E   +  L +  +V+LIG C + +  +LV E    G L   L  +   +P S   +
Sbjct: 55  EMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 113

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +    + G+ +L E   +  ++RD    N+LL                            
Sbjct: 114 LLHQVSMGMKYLEE---KNFVHRDLAARNVLLV-------------------------NR 145

Query: 301 YNAKLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           + AK+SDFGL+K  G +       +       + APE +     +SRSDV+S+GV + E 
Sbjct: 146 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 205

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
           L+  +     +P  +    E               I+         +   +   L + C 
Sbjct: 206 LSYGQ-----KPYKKMKGPE-----------VMAFIEQGKRMECPPECPPELYALMSDCW 249

Query: 420 SRDPKARPLMSEVVEALK-PLPNLKDMASSSYYFQ 453
               + RP    V + ++    +L       ++  
Sbjct: 250 IYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHHH 284

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (494), Expect = 5e-59
 Identities = 68/329 (20%), Positives = 130/329 (39%), Gaps = 55/329 (16%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
           ++       + ++G G FG V+KG ++ +          + VA+KTL     +  + ++L
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGK-----KEVPVAIKTLKAGYTEKQRVDFL 57

Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
            E   +G   H N+++L G   +    +++ E+M  G+L+  L  +         + +  
Sbjct: 58  GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 117

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
           G A G+ +L        ++RD    NIL+++                         +   
Sbjct: 118 GIAAGMKYLAN---MNYVHRDLAARNILVNS-------------------------NLVC 149

Query: 304 KLSDFGLAKDGPEG-DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
           K+SDFGL++   +  + T+ ++       + APE +     TS SDV+SFG+V+ E++T 
Sbjct: 150 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY 209

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
                    N E                  + I+        +       QL   C  ++
Sbjct: 210 GERPYWELSNHE----------------VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQE 253

Query: 423 PKARPLMSEVVEALKPL----PNLKDMAS 447
              RP  +++V  L  L     +LK +A 
Sbjct: 254 RARRPKFADIVSILDKLIRAPDSLKTLAD 282

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (497), Expect = 6e-59
 Identities = 70/332 (21%), Positives = 113/332 (34%), Gaps = 71/332 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
           N     +LG G FG V             K G  + VAVK L        +E  ++E+  
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGIS----KTGVSIQVAVKMLKEKADSSEREALMSELKM 93

Query: 189 LGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL---------------- 231
           +  L  H N+V L+G C       L++E+   G L N+L  +                  
Sbjct: 94  MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153

Query: 232 ------PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
                  L +   +  A   AKG+ FL     +  ++RD    N+L+             
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVT------------ 198

Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
                             K+ DFGLA+D        V         + APE +  G  T 
Sbjct: 199 -------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 245

Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
           +SDV+S+G++L E+ +   +     P   +               FY+LI    +     
Sbjct: 246 KSDVWSYGILLWEIFSLGVNPYPGIPVDAN---------------FYKLIQNGFKMDQPF 290

Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALK 437
              ++   +   C + D + RP    +   L 
Sbjct: 291 YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (493), Expect = 2e-58
 Identities = 77/339 (22%), Positives = 117/339 (34%), Gaps = 71/339 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
                  LG G FG V +          +K    +TVAVK L        +E  ++E+  
Sbjct: 24  RLSFGKTLGAGAFGKVVEATA----YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79

Query: 189 LGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-----------------S 230
           L  L  H+N+V L+G C      L++ E+   G L N L R+                  
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139

Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
           L L     +  +   AKG+AFL     +  I+RD    NILL                  
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL------------------ 178

Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
                        K+ DFGLA+D        V         + APE +     T  SDV+
Sbjct: 179 -------THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231

Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
           S+G+ L E+ +   S     P                   FY++I              +
Sbjct: 232 SYGIFLWELFSLGSSPYPGMPVDSK---------------FYKMIKEGFRMLSPEHAPAE 276

Query: 411 AAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSS 449
              +   C   DP  RP   ++V+ ++     K ++ S+
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQIVQLIE-----KQISEST 310

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  192 bits (489), Expect = 4e-58
 Identities = 71/343 (20%), Positives = 117/343 (34%), Gaps = 72/343 (20%)

Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-H 179
              L+    N      +GEG FG VF+          +       VAVK L  +      
Sbjct: 5   LLSLEYPRNNIEYVRDIGEGAFGRVFQARA----PGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-------- 231
            ++  E   + +  + N+VKL+G C       L++E+M  G L   L   S         
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120

Query: 232 ---------------PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
                          PL  + ++ IA   A G+A+L E   R  ++RD  T N L+    
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVG--- 174

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                                 ++   K++DFGL+++    D             +  PE
Sbjct: 175 ----------------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE 212

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T+ SDV+++GVVL E+ +          + E  ++ + R   G          
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE--VIYYVRD--GNILACPENCP 268

Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
             L              L   C S+ P  RP    +   L+ +
Sbjct: 269 LEL------------YNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 6e-58
 Identities = 70/338 (20%), Positives = 120/338 (35%), Gaps = 60/338 (17%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           R    +  +G+G FG V++G              G  VAVK  +    +      AE+  
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKW-----------RGEEVAVKIFSSREER-SWFREAEIYQ 50

Query: 189 LGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
              L H N++  I    +D+    Q  LV ++   GSL ++L R    +     +K+AL 
Sbjct: 51  TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALS 108

Query: 245 AAKGLAFLHEEA-----ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
            A GLA LH E      +  + +RD K+ NIL+                          +
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-------------------------K 143

Query: 300 DYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMT------GHLTSRSDVYS 351
           +    ++D GLA        T        +GT  Y APE +             R+D+Y+
Sbjct: 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA 203

Query: 352 FGVVLLEMLTGRR----SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
            G+V  E+           D   P  +    + +   + +     +L         S + 
Sbjct: 204 MGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEA 263

Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDM 445
            +  A++   C   +  AR     + + L  L   + +
Sbjct: 264 LRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (483), Expect = 2e-57
 Identities = 71/311 (22%), Positives = 120/311 (38%), Gaps = 64/311 (20%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
           +  +    +G+G FG V  G              G  VAVK + +D     + +LAE + 
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-----------RGNKVAVKCIKNDATA--QAFLAEASV 53

Query: 189 LGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAA 246
           +  L H NLV+L+G  +E+   L +V E+M +GSL ++L  R    L     +K +L   
Sbjct: 54  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 113

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           + + +L        ++RD    N+L+                          +D  AK+S
Sbjct: 114 EAMEYLEG---NNFVHRDLAARNVLVS-------------------------EDNVAKVS 145

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
           DFGL K+      T           + APE +     +++SDV+SFG++L E+ +  R  
Sbjct: 146 DFGLTKEASSTQDT-----GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR-- 198

Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
               P     L +          R  +                   ++  +C   D   R
Sbjct: 199 ---VPYPRIPLKDVV-------PRVEKGYKMDAPDGCP----PAVYEVMKNCWHLDAAMR 244

Query: 427 PLMSEVVEALK 437
           P   ++ E L+
Sbjct: 245 PSFLQLREQLE 255

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (480), Expect = 5e-57
 Identities = 76/313 (24%), Positives = 119/313 (38%), Gaps = 54/313 (17%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAE 185
           ++ R    LG+G FG V +G  +         G  ++VAVK L  D L   +   +++ E
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
           VN +  L H NL++L G  +    ++ V E  P GSL + L +           + A+  
Sbjct: 62  VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
           A+G+ +L     +  I+RD    N+LL                               K+
Sbjct: 121 AEGMGYLES---KRFIHRDLAARNLLLA-------------------------TRDLVKI 152

Query: 306 SDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
            DFGL +  P+ D  +V        + + APE + T   +  SD + FGV L EM T  +
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                 P    N  +       E  R      PR E        Q    +   C +  P+
Sbjct: 213 -----EPWIGLNGSQILHKIDKEGERL-----PRPEDC-----PQDIYNVMVQCWAHKPE 257

Query: 425 ARPLMSEVVEALK 437
            RP    + + L 
Sbjct: 258 DRPTFVALRDFLL 270

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (475), Expect = 3e-56
 Identities = 70/321 (21%), Positives = 121/321 (37%), Gaps = 58/321 (18%)

Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGD 191
           +  LG G FG V KG+ +             TVAVK L ++        E LAE N +  
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKV-------VKTVAVKILKNEANDPALKDELLAEANVMQQ 64

Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
           L +  +V++IG C E +  +LV E    G L  +L +    +     +++    + G+ +
Sbjct: 65  LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKY 122

Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
           L E      ++RD    N+LL                            + AK+SDFGL+
Sbjct: 123 LEE---SNFVHRDLAARNVLLV-------------------------TQHYAKISDFGLS 154

Query: 312 KDGPEG-DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
           K      +     T       + APE +     +S+SDV+SFGV++ E  +  +     +
Sbjct: 155 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ-----K 209

Query: 371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS 430
           P       E              +++            ++   L   C + D + RP  +
Sbjct: 210 PYRGMKGSE-----------VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 258

Query: 431 EVVEALKPLPNLKDMASSSYY 451
            V   L+      D+ +  ++
Sbjct: 259 AVELRLRNY--YYDVVNEGHH 277

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (477), Expect = 4e-56
 Identities = 61/310 (19%), Positives = 116/310 (37%), Gaps = 51/310 (16%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFL 189
           F+   +LG G FG V+KG     G         + VA+K L      + +KE L E   +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREATSPKANKEILDEAYVM 65

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
             + + ++ +L+G C+    +L + + MP G L +++      +     +   +  AKG+
Sbjct: 66  ASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +L +   R +++RD    N+L+                             + K++DFG
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKT-------------------------PQHVKITDFG 156

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           LAK     +K + +        + A E ++    T +SDV+S+GV + E++T        
Sbjct: 157 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
            P  E                   +++                 +   C   D  +RP  
Sbjct: 217 IPASE----------------ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 260

Query: 430 SEVVEALKPL 439
            E++     +
Sbjct: 261 RELIIEFSKM 270

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (475), Expect = 5e-56
 Identities = 72/333 (21%), Positives = 123/333 (36%), Gaps = 72/333 (21%)

Query: 128 TRNFRPE------SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
           TR+  PE        LG+G FG V+K              T +  A K ++    +  ++
Sbjct: 5   TRDLNPEDFWEIIGELGDGAFGKVYKA---------QNKETSVLAAAKVIDTKSEEELED 55

Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
           ++ E++ L    H N+VKL+     ++   ++ EF   G+++  +     PL  S    +
Sbjct: 56  YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 115

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                  L +LH   +  +I+RD K  NIL                            D 
Sbjct: 116 CKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------DG 147

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVL 356
           + KL+DFG++       +       +GT  + APE VM           ++DV+S G+ L
Sbjct: 148 DIKLADFGVSAKNTRTIQRR--DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 205

Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
           +EM           P+ E N +         +     L  P     +S            
Sbjct: 206 IEMAEIE------PPHHELNPMRVLLKIA--KSEPPTLAQPS---RWS----SNFKDFLK 250

Query: 417 HCLSRDPKARPLMSEV-------VEALKPLPNL 442
            CL ++  AR   S++       V++ KP+  L
Sbjct: 251 KCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 283

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (469), Expect = 1e-55
 Identities = 68/321 (21%), Positives = 111/321 (34%), Gaps = 70/321 (21%)

Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
           R++   D       F     LG+G FG V+            +  +   +A+K L    L
Sbjct: 1   RQWALED-------FEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 44

Query: 177 ---QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
                  +   EV     L H N+++L GY  +  +  L+ E+ P G++   L + S   
Sbjct: 45  EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KF 103

Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
                       A  L++ H    + VI+RD K  N+LL                     
Sbjct: 104 DEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLG-------------------- 140

Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
                     K++DFG +   P   +T +     GT  Y  PE +       + D++S G
Sbjct: 141 -----SAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHDEKVDLWSLG 191

Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V+  E L G+       P   +   E  +        F   +               A  
Sbjct: 192 VLCYEFLVGK------PPFEANTYQETYKRISRVEFTFPDFVTE------------GARD 233

Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L  +P  RP++ EV+E
Sbjct: 234 LISRLLKHNPSQRPMLREVLE 254

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (472), Expect = 2e-55
 Identities = 69/343 (20%), Positives = 125/343 (36%), Gaps = 78/343 (22%)

Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
           +      +ND+K        + ++GEG FG V K  I+++G         +  A+K +  
Sbjct: 2   TIYPVLDWNDIKF-------QDVIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKE 47

Query: 174 DGL-QGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL 231
                 H+++  E+  L  L  H N++ L+G C       L  E+ P G+L + L +  +
Sbjct: 48  YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 107

Query: 232 ---------------PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVR 276
                           L     +  A   A+G+ +L +   +  I+RD    NIL+    
Sbjct: 108 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGE-- 162

Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
                                  +Y AK++DFGL++      K    T       + A E
Sbjct: 163 -----------------------NYVAKIADFGLSRGQEVYVKK---TMGRLPVRWMAIE 196

Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
            +     T+ SDV+S+GV+L E+++   +     P       E            Y  + 
Sbjct: 197 SLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAEL-----------YEKLP 240

Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
                   +    +   L   C    P  RP  ++++ +L  +
Sbjct: 241 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 283

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (466), Expect = 5e-55
 Identities = 63/312 (20%), Positives = 107/312 (34%), Gaps = 61/312 (19%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEV 186
           R  + +  +G G F  V+KG         +   T + VA   L    L     + +  E 
Sbjct: 9   RFLKFDIEIGRGSFKTVYKG---------LDTETTVEVAWCELQDRKLTKSERQRFKEEA 59

Query: 187 NFLGDLVHLNLVKLIGYCIE----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
             L  L H N+V+               +LV E M  G+L+ +L R    +   +     
Sbjct: 60  EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWC 118

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               KGL FLH     P+I+RD K  NI +                             +
Sbjct: 119 RQILKGLQFLHTRT-PPIIHRDLKCDNIFITG------------------------PTGS 153

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ D GLA       +   +  V+GT  + APE +         DVY+FG+ +LEM T 
Sbjct: 154 VKIGDLGLATL----KRASFAKAVIGTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMATS 208

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
                + +   +                + R+        F      +  ++   C+ ++
Sbjct: 209 EYPYSECQNAAQI---------------YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253

Query: 423 PKARPLMSEVVE 434
              R  + +++ 
Sbjct: 254 KDERYSIKDLLN 265

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 5e-55
 Identities = 67/311 (21%), Positives = 115/311 (36%), Gaps = 58/311 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           + R E  LG+G FG V+ G                 VA+KTL        + +L E   +
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG-TMSPEAFLQEAQVM 66

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALGAAKG 248
             L H  LV+L      ++   +V E+M +GSL + L       L     + +A   A G
Sbjct: 67  KKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 125

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           +A++        ++RD + +NIL+                          ++   K++DF
Sbjct: 126 MAYVER---MNYVHRDLRAANILVG-------------------------ENLVCKVADF 157

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           GLA+   + ++            + APE  + G  T +SDV+SFG++L E+ T  R    
Sbjct: 158 GLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 216

Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
              N E                    ++         +  +    L   C  ++P+ RP 
Sbjct: 217 GMVNRE----------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 260

Query: 429 MSEVVEALKPL 439
              +   L+  
Sbjct: 261 FEYLQAFLEDY 271

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (462), Expect = 2e-54
 Identities = 65/307 (21%), Positives = 110/307 (35%), Gaps = 55/307 (17%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNF 188
           ++     LGEG +G V            V   T   VAVK ++    +   +    E+  
Sbjct: 6   DWDLVQTLGEGAYGEVQLA---------VNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 56

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
              L H N+VK  G+  E + + L  E+   G L + +      +P     +       G
Sbjct: 57  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAG 115

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           + +LH      + +RD K  N+LLD                         +  N K+SDF
Sbjct: 116 VVYLHG---IGITHRDIKPENLLLD-------------------------ERDNLKISDF 147

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-SDVYSFGVVLLEMLTGRRSMD 367
           GLA      ++  +  ++ GT  Y APE +      +   DV+S G+VL  ML G    D
Sbjct: 148 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207

Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
           +   + +                +    + +   +   K       L    L  +P AR 
Sbjct: 208 QPSDSCQE---------------YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI 252

Query: 428 LMSEVVE 434
            + ++ +
Sbjct: 253 TIPDIKK 259

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 9e-54
 Identities = 61/314 (19%), Positives = 111/314 (35%), Gaps = 62/314 (19%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVN 187
           ++     +G G +G   K           +   G  +  K L++  +     +  ++EVN
Sbjct: 5   DYEVLYTIGTGSYGRCQKI---------RRKSDGKILVWKELDYGSMTEAEKQMLVSEVN 55

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLL--VYEFMPRGSLENHLFRRSL---PLPWSIRMKIA 242
            L +L H N+V+     I+     L  V E+   G L + + + +     L     +++ 
Sbjct: 56  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 115

Query: 243 LGAAKGLAFLHE--EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
                 L   H   +    V++RD K +N+ LD                           
Sbjct: 116 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-------------------------K 150

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
            N KL DFGLA+       T  +   +GT  Y +PE +       +SD++S G +L E+ 
Sbjct: 151 QNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 208

Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
                     P    +  E A      +         R+   +S     +  ++    L+
Sbjct: 209 ALM------PPFTAFSQKELAGKIREGKF-------RRIPYRYS----DELNEIITRMLN 251

Query: 421 RDPKARPLMSEVVE 434
                RP + E++E
Sbjct: 252 LKDYHRPSVEEILE 265

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (451), Expect = 9e-53
 Identities = 68/312 (21%), Positives = 110/312 (35%), Gaps = 55/312 (17%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
                  +GEG FG V +G               L VA+KT  +      +E +L E   
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPE------NPALAVAIKTCKNCTSDSVREKFLQEALT 61

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
           +    H ++VKLIG    ++   ++ E    G L + L  R   L  +  +  A   +  
Sbjct: 62  MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
           LA+L     +  ++RD    N+L+                           +   KL DF
Sbjct: 121 LAYLES---KRFVHRDIAARNVLVS-------------------------SNDCVKLGDF 152

Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK 368
           GL++   +    + +++      + APE +     TS SDV+ FGV + E+L        
Sbjct: 153 GLSRYMEDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV---- 207

Query: 369 NRPNGEHNLVEWARPHL-GERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
            +P       +       GER        P L              L   C + DP  RP
Sbjct: 208 -KPFQGVKNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRP 254

Query: 428 LMSEVVEALKPL 439
             +E+   L  +
Sbjct: 255 RFTELKAQLSTI 266

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  179 bits (454), Expect = 1e-52
 Identities = 67/314 (21%), Positives = 117/314 (37%), Gaps = 68/314 (21%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LA 184
            + F     +G G FG V+                   VA+K +++ G Q +++W   + 
Sbjct: 14  EKLFSDLREIGHGSFGAVYFA---------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           EV FL  L H N ++  G  + +    LV E+    + +     +  PL       +  G
Sbjct: 65  EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHG 123

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
           A +GLA+LH      +I+RD K  NILL                          +    K
Sbjct: 124 ALQGLAYLH---SHNMIHRDVKAGNILLS-------------------------EPGLVK 155

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLT 361
           L DFG A           +   +GT  + APE ++    G    + DV+S G+  +E+  
Sbjct: 156 LGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209

Query: 362 GRRSM-DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
            +  + + N  +  +++ +   P                 GH+S    +        CL 
Sbjct: 210 RKPPLFNMNAMSALYHIAQNESP-------------ALQSGHWS----EYFRNFVDSCLQ 252

Query: 421 RDPKARPLMSEVVE 434
           + P+ RP    +++
Sbjct: 253 KIPQDRPTSEVLLK 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (443), Expect = 2e-51
 Identities = 74/334 (22%), Positives = 130/334 (38%), Gaps = 62/334 (18%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNF 188
                  LG+G FG V++G         VK      VA+KT+N    ++   E+L E + 
Sbjct: 21  KITMSRELGQGSFGMVYEGVA----KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 76

Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF---------RRSLPLPWSIRM 239
           + +    ++V+L+G   +    L++ E M RG L+++L              P   S  +
Sbjct: 77  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           ++A   A G+A+L+       ++RD    N ++                          +
Sbjct: 137 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVA-------------------------E 168

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
           D+  K+ DFG+ +D  E D      + +    + +PE +  G  T+ SDV+SFGVVL E+
Sbjct: 169 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 228

Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
            T      +   N +                  R +                 +L   C 
Sbjct: 229 ATLAEQPYQGLSNEQ----------------VLRFVMEGGLLDKPDNCPDMLFELMRMCW 272

Query: 420 SRDPKARPLMSEVVEALKPL--PNLKDMASSSYY 451
             +PK RP   E++ ++K    P  +++  S YY
Sbjct: 273 QYNPKMRPSFLEIISSIKEEMEPGFREV--SFYY 304

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 5e-51
 Identities = 63/327 (19%), Positives = 116/327 (35%), Gaps = 61/327 (18%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
            + +     +G+G  G V+           +   TG  VA++ +N       +  + E+ 
Sbjct: 19  KKKYTRFEKIGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEIL 69

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            + +  + N+V  +   +  D+  +V E++  GSL + +      +       +     +
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQ 127

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
            L FLH      VI+RD K+ NILL                           D + KL+D
Sbjct: 128 ALEFLH---SNQVIHRDIKSDNILLG-------------------------MDGSVKLTD 159

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FG              + ++GT  + APE V       + D++S G++ +EM+ G     
Sbjct: 160 FGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---- 213

Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
              P    N +               L +P      S             CL  D + R 
Sbjct: 214 --PPYLNENPLRALYLIA--TNGTPELQNPE---KLS----AIFRDFLNRCLDMDVEKRG 262

Query: 428 LMSEVVE-----ALKPLPNLKDMASSS 449
              E+++       KPL +L  + +++
Sbjct: 263 SAKELLQHQFLKIAKPLSSLTPLIAAA 289

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (438), Expect = 1e-50
 Identities = 82/328 (25%), Positives = 118/328 (35%), Gaps = 65/328 (19%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNF 188
             +    LG G FG V +           K  T  TVAVK L        H+  ++E+  
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKI 69

Query: 189 LGDLVH-LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---------------SL 231
           L  + H LN+V L+G C +    L ++ EF   G+L  +L  +                 
Sbjct: 70  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129

Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
            L     +  +   AKG+ FL     R  I+RD    NILL                   
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS------------------ 168

Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
                  +    K+ DFGLA+D  +               + APE +     T +SDV+S
Sbjct: 169 -------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 221

Query: 352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA 411
           FGV+L E+ +   S     P     + E     L E  R       R   + +     + 
Sbjct: 222 FGVLLWEIFSLGAS-----PYPGVKIDEEFCRRLKEGTR------MRAPDYTT----PEM 266

Query: 412 AQLAAHCLSRDPKARPLMSEVVEALKPL 439
            Q    C   +P  RP  SE+VE L  L
Sbjct: 267 YQTMLDCWHGEPSQRPTFSELVEHLGNL 294

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 5e-50
 Identities = 75/327 (22%), Positives = 119/327 (36%), Gaps = 63/327 (19%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNF 188
                  LGEG FG V     E  G    KP     VAVK L  D  +    + ++E+  
Sbjct: 14  RLVLGKPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 71

Query: 189 LGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP--------------- 232
           +  +  H N++ L+G C +D    ++ E+  +G+L  +L  R  P               
Sbjct: 72  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
           L     +  A   A+G+ +L     +  I+RD    N+L+                    
Sbjct: 132 LSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT------------------- 169

Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
                 +D   K++DFGLA+D    D    +T       + APE +     T +SDV+SF
Sbjct: 170 ------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223

Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
           GV+L E+ T   S     P  E                 ++L+              +  
Sbjct: 224 GVLLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELY 267

Query: 413 QLAAHCLSRDPKARPLMSEVVEALKPL 439
            +   C    P  RP   ++VE L  +
Sbjct: 268 MMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  172 bits (436), Expect = 9e-50
 Identities = 70/367 (19%), Positives = 127/367 (34%), Gaps = 59/367 (16%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
            +     LG G FG V +          V+  TG     K +N            E++ +
Sbjct: 30  YYDILEELGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIM 80

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
             L H  L+ L     +  + +L+ EF+  G L + +      +  +  +     A +GL
Sbjct: 81  NQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 140

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             +H   E  +++ D K  NI+ +                         +  + K+ DFG
Sbjct: 141 KHMH---EHSIVHLDIKPENIMCET-----------------------KKASSVKIIDFG 174

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           LA      +          T  +AAPE V    +   +D+++ GV+   +L+G       
Sbjct: 175 LATKLNPDEIVK---VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL------ 225

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
            P    + +E  +        F       +          +A     + L ++P+ R  +
Sbjct: 226 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVS--------PEAKDFIKNLLQKEPRKRLTV 277

Query: 430 SEVVEA--LKP-LPNLKDMASSSYYFQTMQ--AERIGSSPNTRNGIR--AQGGSLSRNGQ 482
            + +E   LK    NL     SS Y +  Q   E+    P  +  I   A   SL ++  
Sbjct: 278 HDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRP 337

Query: 483 RSLSIPN 489
           +   I +
Sbjct: 338 QEYQIYD 344

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  171 bits (433), Expect = 2e-49
 Identities = 62/305 (20%), Positives = 98/305 (32%), Gaps = 52/305 (17%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           ++     LG G FG V +           +  TG   A K +        +    E+  +
Sbjct: 27  HYDIHEELGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTM 77

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
             L H  LV L     +D++ +++YEFM  G L   +      +     ++      KGL
Sbjct: 78  SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             +H   E   ++ D K  NI+    R                           KL DFG
Sbjct: 138 CHMH---ENNYVHLDLKPENIMFTTKR-----------------------SNELKLIDFG 171

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           L           V     GT  +AAPE      +   +D++S GV+   +L+G       
Sbjct: 172 LTAHLDPKQSVKV---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL------ 222

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
            P G  N  E  R                +        ++         L  DP  R  +
Sbjct: 223 SPFGGENDDETLRNVKSCDWNMDDSAFSGI--------SEDGKDFIRKLLLADPNTRMTI 274

Query: 430 SEVVE 434
            + +E
Sbjct: 275 HQALE 279

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 3e-48
 Identities = 59/314 (18%), Positives = 100/314 (31%), Gaps = 59/314 (18%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKE 181
           K    +F+   +LGEG F  V             +  T    A+K L    +        
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLA---------RELATSREYAIKILEKRHIIKENKVPY 54

Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
              E + +  L H   VKL     +D++      +   G L  ++ +       +     
Sbjct: 55  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFY 113

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                  L +LH    + +I+RD K  NILL+                         +D 
Sbjct: 114 TAEIVSALEYLHG---KGIIHRDLKPENILLN-------------------------EDM 145

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           + +++DFG AK      K   +   +GT  Y +PE +        SD+++ G ++ +++ 
Sbjct: 146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205

Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
           G        P    N     +  +     F     P            KA  L    L  
Sbjct: 206 GL------PPFRAGNEYLIFQKIIKLEYDFPEKFFP------------KARDLVEKLLVL 247

Query: 422 DPKARPLMSEVVEA 435
           D   R    E+   
Sbjct: 248 DATKRLGCEEMEGY 261

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  158 bits (400), Expect = 2e-45
 Identities = 64/314 (20%), Positives = 106/314 (33%), Gaps = 59/314 (18%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVN 187
           +    +LG GG   V                    VAVK L  D  +    +  +  E  
Sbjct: 9   YELGEILGFGGMSEVHLA---------RDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 59

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRL----LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
               L H  +V +      +        +V E++   +L + +     P+     +++  
Sbjct: 60  NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIA 118

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
            A + L F H+     +I+RD K +NI++ A  A     FG                   
Sbjct: 119 DACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIA------------- 162

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
                        G+    +  V+GT  Y +PE      + +RSDVYS G VL E+LTG 
Sbjct: 163 -----------DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211

Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
                  P    + V  A  H+ E           L        +     +    L+++P
Sbjct: 212 ------PPFTGDSPVSVAYQHVREDPIPPSARHEGL--------SADLDAVVLKALAKNP 257

Query: 424 KARPL-MSEVVEAL 436
           + R    +E+   L
Sbjct: 258 ENRYQTAAEMRADL 271

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (403), Expect = 2e-45
 Identities = 58/373 (15%), Positives = 123/373 (32%), Gaps = 66/373 (17%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
            +     LG G FG V +          V+  +  T   K +   G         E++ L
Sbjct: 6   KYMIAEDLGRGEFGIVHRC---------VETSSKKTYMAKFVKVKGTD-QVLVKKEISIL 55

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
               H N++ L       ++ ++++EF+    +   +   +  L     +       + L
Sbjct: 56  NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            FLH      + + D +  NI+    R                           K+ +FG
Sbjct: 116 QFLH---SHNIGHFDIRPENIIYQTRR-----------------------SSTIKIIEFG 149

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
            A+    GD   +   +     Y APE      +++ +D++S G ++  +L+G       
Sbjct: 150 QARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI------ 200

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
            P       +     +     F       +        + +A       L ++ K+R   
Sbjct: 201 NPFLAETNQQIIENIMNAEYTFDEEAFKEI--------SIEAMDFVDRLLVKERKSRMTA 252

Query: 430 SEVV------EALKPLPN--LKDMASSSYYFQTMQAERIGSSPNTRNGIRAQGGSLSRNG 481
           SE +      + ++ +    ++ +    YY   ++ +        R    + GG++    
Sbjct: 253 SEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAAR---ISCGGAIRS-- 307

Query: 482 QRSLSIPNGSYAS 494
           Q+ +S+     AS
Sbjct: 308 QKGVSVAKVKVAS 320

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (399), Expect = 6e-45
 Identities = 52/315 (16%), Positives = 96/315 (30%), Gaps = 42/315 (13%)

Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
           +L++  R +R    +G G FG ++ G              G  VA+K         H + 
Sbjct: 2   ELRVGNR-YRLGRKIGSGSFGDIYLG---------TDIAAGEEVAIKLECVK--TKHPQL 49

Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
             E      +     +  I +C  +    ++   +   SLE+     S        + +A
Sbjct: 50  HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA 109

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
                 + ++H    +  I+RD K  N L         GK G  +Y   F     ++D  
Sbjct: 110 DQMISRIEYIHS---KNFIHRDVKPDNFL------MGLGKKGNLVYIIDFGLAKKYRD-- 158

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
                        +      +  + GT  YA+    +    + R D+ S G VL+    G
Sbjct: 159 ---------ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 209

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
                  +   +    E          +        L   +      + A     C S  
Sbjct: 210 SLPWQGLKAATKRQKYER------ISEKKMSTPIEVLCKGYP----SEFATYLNFCRSLR 259

Query: 423 PKARPLMSEVVEALK 437
              +P  S + +  +
Sbjct: 260 FDDKPDYSYLRQLFR 274

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  155 bits (393), Expect = 4e-44
 Identities = 59/305 (19%), Positives = 102/305 (33%), Gaps = 53/305 (17%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFL 189
           +    +LG G F  V                T   VA+K +    L+G +     E+  L
Sbjct: 11  YDFRDVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
             + H N+V L           L+ + +  G L + +  +          ++       +
Sbjct: 62  HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAV 120

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH+     +++RD K  N+L                         L +D    +SDFG
Sbjct: 121 KYLHD---LGIVHRDLKPENLL----------------------YYSLDEDSKIMISDFG 155

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
           L+K     D   V +   GT GY APE +     +   D +S GV+   +L G       
Sbjct: 156 LSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY------ 206

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
            P  + N  +     L     F       +        +  A     H + +DP+ R   
Sbjct: 207 PPFYDENDAKLFEQILKAEYEFDSPYWDDI--------SDSAKDFIRHLMEKDPEKRFTC 258

Query: 430 SEVVE 434
            + ++
Sbjct: 259 EQALQ 263

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  156 bits (394), Expect = 1e-43
 Identities = 70/305 (22%), Positives = 108/305 (35%), Gaps = 64/305 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEV 186
           +F    ++G GGFG V+            K  TG   A+K L+   +   QG    L E 
Sbjct: 5   DFSVHRIIGRGGFGEVYGC---------RKADTGKMYAMKCLDKKRIKMKQGETLALNER 55

Query: 187 N---FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
                +       +V +       D+   + + M  G L  HL +  +     +R   A 
Sbjct: 56  IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR-FYAA 114

Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
               GL  +H    R V+YRD K +NILLD                         +  + 
Sbjct: 115 EIILGLEHMH---NRFVVYRDLKPANILLD-------------------------EHGHV 146

Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTG 362
           ++SD GLA D  +          +GT+GY APE +  G    S +D +S G +L ++L G
Sbjct: 147 RISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 202

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
                +++   +H +                     L   FS     +   L    L RD
Sbjct: 203 HSPFRQHKTKDKHEIDRMTLTM-----------AVELPDSFS----PELRSLLEGLLQRD 247

Query: 423 PKARP 427
              R 
Sbjct: 248 VNRRL 252

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  153 bits (387), Expect = 2e-43
 Identities = 67/321 (20%), Positives = 110/321 (34%), Gaps = 71/321 (22%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---------QGHK 180
           N+ P+ +LG G    V +          +   T    AVK ++  G          +  +
Sbjct: 4   NYEPKEILGRGVSSVVRRC---------IHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 54

Query: 181 EWLAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
             L EV+ L  +  H N+++L      +    LV++ M +G L ++L  +   L      
Sbjct: 55  ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETR 113

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           KI     + +  LH   +  +++RD K  NILLD                          
Sbjct: 114 KIMRALLEVICALH---KLNIVHRDLKPENILLD-------------------------D 145

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL------TSRSDVYSFG 353
           D N KL+DFG +     G+K      V GT  Y APE +               D++S G
Sbjct: 146 DMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 202

Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
           V++  +L G        P      +   R  +    +F                +     
Sbjct: 203 VIMYTLLAGS------PPFWHRKQMLMLRMIMSGNYQFGSPEWDDY--------SDTVKD 248

Query: 414 LAAHCLSRDPKARPLMSEVVE 434
           L +  L   P+ R    E + 
Sbjct: 249 LVSRFLVVQPQKRYTAEEALA 269

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  152 bits (384), Expect = 7e-43
 Identities = 44/315 (13%), Positives = 85/315 (26%), Gaps = 49/315 (15%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +++    +GEG FG +F+G                 VA+K           +   E    
Sbjct: 6   HYKVGRRIGEGSFGVIFEG---------TNLLNNQQVAIKFEPRR--SDAPQLRDEYRTY 54

Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
             L     +  + Y  ++    ++   +   SLE+ L               A      +
Sbjct: 55  KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 114

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
             +HE   + ++YRD K  N L+                                + DFG
Sbjct: 115 QSIHE---KSLVYRDIKPDNFLIG--------------------RPNSKNANMIYVVDFG 151

Query: 310 LAKDGPEGD-----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + K   +              + GT  Y +    +    + R D+ + G V +  L G  
Sbjct: 152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL 211

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                +        E          +        L   F     ++  +   +  +    
Sbjct: 212 PWQGLKAATNKQKYERI------GEKKQSTPLRELCAGFP----EEFYKYMHYARNLAFD 261

Query: 425 ARPLMSEVVEALKPL 439
           A P    +      +
Sbjct: 262 ATPDYDYLQGLFSKV 276

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 6e-42
 Identities = 70/302 (23%), Positives = 103/302 (34%), Gaps = 62/302 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEV 186
           +F    +LG+G FG VF               T    A+K L  D +    +    + E 
Sbjct: 3   DFILHKMLGKGSFGKVFLA---------EFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 53

Query: 187 NFLG-DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
             L     H  L  +       +    V E++  G L  H+         S     A   
Sbjct: 54  RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEI 112

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
             GL FLH    + ++YRD K  NILLD                         +D + K+
Sbjct: 113 ILGLQFLHS---KGIVYRDLKLDNILLD-------------------------KDGHIKI 144

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFG+ K+   GD         GT  Y APE ++        D +SFGV+L EML G+  
Sbjct: 145 ADFGMCKENMLGDAKT--NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ-- 200

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                P    +  E       +   + R ++              A  L      R+P+ 
Sbjct: 201 ----SPFHGQDEEELFHSIRMDNPFYPRWLEKE------------AKDLLVKLFVREPEK 244

Query: 426 RP 427
           R 
Sbjct: 245 RL 246

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 9e-41
 Identities = 67/333 (20%), Positives = 124/333 (37%), Gaps = 57/333 (17%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVN 187
           NF+    +GEG +G V+K              TG  VA+K +  D          + E++
Sbjct: 3   NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            L +L H N+VKL+     +++  LV+EF+ +   +         +P  +         +
Sbjct: 54  LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GLAF H      V++RD K  N+L++                          +   KL+D
Sbjct: 114 GLAFCH---SHRVLHRDLKPQNLLIN-------------------------TEGAIKLAD 145

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FGLA+      +T+ +  V+  +  A    +   + ++  D++S G +  EM+T R    
Sbjct: 146 FGLARAFGVPVRTY-THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 204

Query: 368 KNRPN----------GEHNLVEWARP-HLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
            +             G  + V W     + + +  +     +          +    L +
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLS 264

Query: 417 HCLSRDPKARPLMSEVV------EALKPLPNLK 443
             L  DP  R      +      +  KP+P+L+
Sbjct: 265 QMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (368), Expect = 1e-40
 Identities = 60/310 (19%), Positives = 101/310 (32%), Gaps = 57/310 (18%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------ 184
           +     LG G F  V K           +  TGL  A K +     +  +  ++      
Sbjct: 12  YDTGEELGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62

Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
           EV+ L ++ H N++ L          +L+ E +  G L + L  +   L      +    
Sbjct: 63  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQ 121

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
              G+ +LH      + + D K  NI+L                      +        K
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLL---------------------DRNVPKPRIK 157

Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
           + DFGLA     G++      + GT  + APE V    L   +D++S GV+   +L+G  
Sbjct: 158 IIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA- 213

Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
                 P       E           F                +  A       L +DPK
Sbjct: 214 -----SPFLGDTKQETLANVSAVNYEFEDEYFSNT--------SALAKDFIRRLLVKDPK 260

Query: 425 ARPLMSEVVE 434
            R  + + ++
Sbjct: 261 KRMTIQDSLQ 270

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 2e-40
 Identities = 67/315 (21%), Positives = 111/315 (35%), Gaps = 56/315 (17%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLG 190
            LGEG F  V+K              T   VA+K +        K+      L E+  L 
Sbjct: 5   FLGEGQFATVYKA---------RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 55

Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
           +L H N++ L+          LV++FM    LE  +   SL L  S      L   +GL 
Sbjct: 56  ELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 114

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
           +LH   +  +++RD K +N+LLD                         ++   KL+DFGL
Sbjct: 115 YLH---QHWILHRDLKPNNLLLD-------------------------ENGVLKLADFGL 146

Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRRSMDKN 369
           AK     ++ +  T  + T  Y APE +    +     D+++ G +L E+L     +  +
Sbjct: 147 AKSFGSPNRAY--THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 204

Query: 370 RP----------NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
                        G     +W           ++        H           L     
Sbjct: 205 SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLF 264

Query: 420 SRDPKARPLMSEVVE 434
             +P AR   ++ ++
Sbjct: 265 LFNPCARITATQALK 279

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  144 bits (365), Expect = 6e-40
 Identities = 69/302 (22%), Positives = 109/302 (36%), Gaps = 64/302 (21%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
           ++F+    LG G FG V                 G   A+K L  + +   K+      E
Sbjct: 4   QDFQILRTLGTGSFGRVHLI---------RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE 54

Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
              L  + H  ++++ G   +  Q  ++ +++  G     L R+S   P  +    A   
Sbjct: 55  RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE-GGELFSLLRKSQRFPNPVAKFYAAEV 113

Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
              L +LH    + +IYRD K  NILLD                         ++ + K+
Sbjct: 114 CLALEYLHS---KDIIYRDLKPENILLD-------------------------KNGHIKI 145

Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
           +DFG AK  P+   T       GT  Y APE V T       D +SFG+++ EML G   
Sbjct: 146 TDFGFAKYVPDVTYTLC-----GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY-- 198

Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
                P  + N ++     L    RF    +                 L +  ++RD   
Sbjct: 199 ----TPFYDSNTMKTYEKILNAELRFPPFFNE------------DVKDLLSRLITRDLSQ 242

Query: 426 RP 427
           R 
Sbjct: 243 RL 244

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 1e-39
 Identities = 68/340 (20%), Positives = 114/340 (33%), Gaps = 62/340 (18%)

Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---- 182
           A + +   + +GEG +G VFK    +NG        G  VA+K +     +         
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 56

Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWS 236
            +A +  L    H N+V+L   C            LV+E + +             +P  
Sbjct: 57  EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 116

Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
               +     +GL FLH      V++RD K  NIL+                        
Sbjct: 117 TIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVT----------------------- 150

Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
                  KL+DFGLA+           T V+ T  Y APE ++     +  D++S G + 
Sbjct: 151 --SSGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF 205

Query: 357 LEMLTGRRSMDKNRPNGEHNLV----------EWARPHLGERRRFYRLIDPRLEGHFSIK 406
            EM   +     +    +   +          +W R     R+ F+      +E   +  
Sbjct: 206 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT-D 264

Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKD 444
             +    L   CL+ +P  R      +     + L   K+
Sbjct: 265 IDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE 304

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 2e-39
 Identities = 60/325 (18%), Positives = 112/325 (34%), Gaps = 55/325 (16%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEV 186
              +   S +GEG +G V   +              + VA+K ++    Q + +  L E+
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAY---------DNVNKVRVAIKKISPFEHQTYCQRTLREI 57

Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALG 244
             L    H N++ +           +   ++    +   L++  ++  L           
Sbjct: 58  KILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ 117

Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
             +GL ++H      V++RD K SN+LL+                            + K
Sbjct: 118 ILRGLKYIH---SANVLHRDLKPSNLLLN-------------------------TTCDLK 149

Query: 305 LSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTG 362
           + DFGLA+   P+ D T   T  + T  Y APE ++     ++S D++S G +L EML+ 
Sbjct: 150 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 209

Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK------------ 410
           R          + N +        +      +         S+    K            
Sbjct: 210 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS 269

Query: 411 -AAQLAAHCLSRDPKARPLMSEVVE 434
            A  L    L+ +P  R  + + + 
Sbjct: 270 KALDLLDKMLTFNPHKRIEVEQALA 294

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 3e-39
 Identities = 61/313 (19%), Positives = 98/313 (31%), Gaps = 73/313 (23%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE------WLA 184
           ++   LLG GGFG V+ G         ++    L VA+K +  D +    E         
Sbjct: 6   YQVGPLLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 56

Query: 185 EVNFLGDL--VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           EV  L  +      +++L+ +    D  +L+ E                 L   +     
Sbjct: 57  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               + +   H      V++RD K  NIL+D                             
Sbjct: 117 WQVLEAVRHCH---NCGVLHRDIKDENILIDL------------------------NRGE 149

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLT 361
            KL DFG         K  V T   GT  Y+ PE++       RS  V+S G++L +M+ 
Sbjct: 150 LKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205

Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
           G    +      +  ++                         S     +   L   CL+ 
Sbjct: 206 GDIPFE-----HDEEIIRG---------------QVFFRQRVS----SECQHLIRWCLAL 241

Query: 422 DPKARPLMSEVVE 434
            P  RP   E+  
Sbjct: 242 RPSDRPTFEEIQN 254

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 3e-38
 Identities = 78/306 (25%), Positives = 106/306 (34%), Gaps = 61/306 (19%)

Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
           K+   +F    LLG+G FG V             +  TG   A+K L  + +    E   
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILV---------REKATGRYYAMKILRKEVIIAKDEVAH 51

Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
            + E   L +  H  L  L       D+   V E+   G L  HL  R            
Sbjct: 52  TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFY 110

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                  L +LH    R V+YRD K  N++LD                         +D 
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KDG 142

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
           + K++DFGL K+G     T       GT  Y APE +         D +  GVV+ EM+ 
Sbjct: 143 HIKITDFGLCKEGISDGATM--KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200

Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
           GR       P    +        L E  RF R + P            +A  L A  L +
Sbjct: 201 GR------LPFYNQDHERLFELILMEEIRFPRTLSP------------EAKSLLAGLLKK 242

Query: 422 DPKARP 427
           DPK R 
Sbjct: 243 DPKQRL 248

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 2e-37
 Identities = 67/346 (19%), Positives = 112/346 (32%), Gaps = 70/346 (20%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           ++    ++G G FG V++              +G  VA+K +  D     +    E+  +
Sbjct: 21  SYTDTKVIGNGSFGVVYQA---------KLCDSGELVAIKKVLQD----KRFKNRELQIM 67

Query: 190 GDLVHLNLVKLIGYCIEDDQR------LLVYEFMPRGSLEN--HLFRRSLPLPWSIRMKI 241
             L H N+V+L  +     ++       LV +++P        H  R    LP       
Sbjct: 68  RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127

Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
                + LA++H      + +RD K  N+LLD                            
Sbjct: 128 MYQLFRSLAYIHS---FGICHRDIKPQNLLLDP------------------------DTA 160

Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
             KL DFG AK    G+     + +   Y  A          TS  DV+S G VL E+L 
Sbjct: 161 VLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218

Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGE-----------RRRFYRLIDPRLEGHFSIKGAQK 410
           G+     +    +   +                      +F ++        F  +   +
Sbjct: 219 GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278

Query: 411 AAQLAAHCLSRDPKAR---------PLMSEVVEALKPLPNLKDMAS 447
           A  L +  L   P AR             E+ +    LPN +D  +
Sbjct: 279 AIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPA 324

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  136 bits (343), Expect = 4e-37
 Identities = 60/318 (18%), Positives = 111/318 (34%), Gaps = 53/318 (16%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVN 187
            +     +GEG +G V+K               G T A+K +  +          + E++
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN----------YGETFALKKIRLEKEDEGIPSTTIREIS 52

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            L +L H N+VKL        + +LV+E +    L+  L      L         L    
Sbjct: 53  ILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLN 111

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           G+A+ H   +R V++RD K  N+L++                         ++   K++D
Sbjct: 112 GIAYCH---DRRVLHRDLKPQNLLIN-------------------------REGELKIAD 143

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FGLA+      + +    ++  +  A    + +   ++  D++S G +  EM+ G     
Sbjct: 144 FGLARAFGIPVRKYT-HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202

Query: 368 KNRPN----------GEHNLVEWAR-PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
                          G  N   W     L +    + + +P     F     +    L +
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLS 262

Query: 417 HCLSRDPKARPLMSEVVE 434
             L  DP  R    + +E
Sbjct: 263 KMLKLDPNQRITAKQALE 280

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 6e-37
 Identities = 56/305 (18%), Positives = 95/305 (31%), Gaps = 58/305 (19%)

Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H 194
           +LG G  G V +              T    A+K L         +   EV         
Sbjct: 19  VLGLGINGKVLQI---------FNKRTQEKFALKMLQD-----CPKARREVELHWRASQC 64

Query: 195 LNLVKLIGYC----IEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGL 249
            ++V+++             L+V E +  G L + +  R           +I     + +
Sbjct: 65  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 124

Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
            +LH      + +RD K  N+L  + R                       +   KL+DFG
Sbjct: 125 QYLHS---INIAHRDVKPENLLYTSKR----------------------PNAILKLTDFG 159

Query: 310 LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
            AK+    +          T  Y APE +         D++S GV++  +L G       
Sbjct: 160 FAKETTSHNSLT---TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-- 214

Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
                H L          R   Y   +P      S    ++   L  + L  +P  R  +
Sbjct: 215 ---SNHGLAISPGMKTRIRMGQYEFPNPEWS-EVS----EEVKMLIRNLLKTEPTQRMTI 266

Query: 430 SEVVE 434
           +E + 
Sbjct: 267 TEFMN 271

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 3e-34
 Identities = 63/332 (18%), Positives = 106/332 (31%), Gaps = 65/332 (19%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVN 187
            +   + +G+G FG VFK              TG  VA+K +  +  +       L E+ 
Sbjct: 11  KYEKLAKIGQGTFGEVFKA---------RHRKTGQKVALKKVLMENEKEGFPITALREIK 61

Query: 188 FLGDLVHLNLVKLIGYCIEDDQR--------LLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
            L  L H N+V LI  C               LV++F                   S   
Sbjct: 62  ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIK 120

Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
           ++      GL ++H      +++RD K +N+L+                          +
Sbjct: 121 RVMQMLLNGLYYIHR---NKILHRDMKAANVLIT-------------------------R 152

Query: 300 DYNAKLSDFGLAKDGPEGDKTHVS--TRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVL 356
           D   KL+DFGLA+       +  +  T  + T  Y  PE ++         D++  G ++
Sbjct: 153 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 212

Query: 357 LEMLTGRRSMDKNRPNGEHNLV-------------EWARPHLGERRRFYRLIDPRLEGHF 403
            EM T    M  N    +  L+                   L E+    +    +++   
Sbjct: 213 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

Query: 404 SIKGAQKAAQ-LAAHCLSRDPKARPLMSEVVE 434
                   A  L    L  DP  R    + + 
Sbjct: 273 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 3e-33
 Identities = 60/319 (18%), Positives = 103/319 (32%), Gaps = 53/319 (16%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVN 187
            +     +GEG +G VFK              T   VA+K +  D          L E+ 
Sbjct: 3   KYEKLEKIGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREIC 53

Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
            L +L H N+V+L      D +  LV+EF  +   +             I         K
Sbjct: 54  LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLK 112

Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
           GL F H    R V++RD K  N+L++                         ++   KL++
Sbjct: 113 GLGFCHS---RNVLHRDLKPQNLLIN-------------------------RNGELKLAN 144

Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
           FGLA+      + + S  V+  +             ++  D++S G +  E+    R + 
Sbjct: 145 FGLARAFGIPVRCY-SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203

Query: 368 KNRPN-----------GEHNLVEWAR-PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLA 415
                           G     +W     L + + +          +   K       L 
Sbjct: 204 PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263

Query: 416 AHCLSRDPKARPLMSEVVE 434
            + L  +P  R    E ++
Sbjct: 264 QNLLKCNPVQRISAEEALQ 282

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (308), Expect = 9e-32
 Identities = 66/348 (18%), Positives = 114/348 (32%), Gaps = 67/348 (19%)

Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNF 188
           +R    +G G +G V            V   TG  VA+K L          K    E+  
Sbjct: 20  YRDLQPVGSGAYGAVCSA---------VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL 70

Query: 189 LGDLVHLNLVKLIGYCIEDDQR------LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
           L  + H N++ L+     D+         LV  FM  G+    L +    L       + 
Sbjct: 71  LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHE-KLGEDRIQFLV 127

Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
               KGL ++H      +I+RD K  N+ ++                         +D  
Sbjct: 128 YQMLKGLRYIHA---AGIIHRDLKPGNLAVN-------------------------EDCE 159

Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
            K+ DFGLA+         ++  V+  +  A    +     T   D++S G ++ EM+TG
Sbjct: 160 LKILDFGLARQADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 215

Query: 363 RRSMDKNRPNGEHNLV---------EWARPHLGERRRFYRLIDPRLEG----HFSIKGAQ 409
           +     +    +   +         E+ +    +  + Y    P LE           + 
Sbjct: 216 KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASP 275

Query: 410 KAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASSSYYFQTM 455
            A  L    L  D + R    E +     + L + +D      Y  + 
Sbjct: 276 LAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKYDDSF 323

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  122 bits (308), Expect = 9e-32
 Identities = 69/339 (20%), Positives = 109/339 (32%), Gaps = 67/339 (19%)

Query: 95  SNAESNSSTSKLEEELKVASR--LRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIE 151
           + A+  S    ++E L  A    L+K+       A  + F     LG G FG V      
Sbjct: 4   AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV--- 60

Query: 152 ENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLVHLNLVKLIGYCIEDD 208
                     +G   A+K L+   +   K+    L E   L  +    LVKL     ++ 
Sbjct: 61  ------KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114

Query: 209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS 268
              +V E++  G + +HL R             A        +LH      +IYRD K  
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE 170

Query: 269 NILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMG 328
           N+L+D                         Q    +++DFG AK       T     + G
Sbjct: 171 NLLID-------------------------QQGYIQVTDFGFAKRVKGRTWT-----LCG 200

Query: 329 TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER 388
           T    APE +++       D ++ GV++ EM  G        P      ++     +  +
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY------PPFFADQPIQIYEKIVSGK 254

Query: 389 RRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
            RF                      L  + L  D   R 
Sbjct: 255 VRFPSHFSS------------DLKDLLRNLLQVDLTKRF 281

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 7e-31
 Identities = 73/351 (20%), Positives = 117/351 (33%), Gaps = 58/351 (16%)

Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
           R    T +  K+   NF    +LG G +G VF               TG   A+K L   
Sbjct: 10  RTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVR------KISGHDTGKLYAMKVLKKA 63

Query: 175 GL----QGHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR 229
            +    +  +    E   L  +     LV L      + +  L+ +++  G L  HL +R
Sbjct: 64  TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR 123

Query: 230 SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
                              L  LH+     +IYRD K  NILLD                
Sbjct: 124 E-RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLD---------------- 163

Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRS 347
                     + +  L+DFGL+K+    +    +    GT  Y AP+ V  G        
Sbjct: 164 ---------SNGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAV 213

Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
           D +S GV++ E+LTG           +++  E +R  L     + + +            
Sbjct: 214 DWWSLGVLMYELLTGASPFT--VDGEKNSQAEISRRILKSEPPYPQEMSA---------- 261

Query: 408 AQKAAQLAAHCLSRDPKARP-LMSEVVEALKPLPNLKDMASSSYYFQTMQA 457
              A  L    L +DPK R        + +K     + +       + + A
Sbjct: 262 --LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPA 310

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  116 bits (291), Expect = 2e-29
 Identities = 53/329 (16%), Positives = 99/329 (30%), Gaps = 70/329 (21%)

Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
           +++    LG G +  VF+          +       V VK L        K+   E+  L
Sbjct: 36  DYQLVRKLGRGKYSEVFEA---------INITNNEKVVVKILKPVK---KKKIKREIKIL 83

Query: 190 GDL-VHLNLVKLIGYCIEDDQRL--LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
            +L    N++ L     +   R   LV+E +     +         L             
Sbjct: 84  ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEIL 139

Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
           K L + H      +++RD K  N+++D                         +    +L 
Sbjct: 140 KALDYCHS---MGIMHRDVKPHNVMIDH------------------------EHRKLRLI 172

Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS 365
           D+GLA+    G +       + +  +  PE ++         D++S G +L  M+  +  
Sbjct: 173 DWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229

Query: 366 MDKNRPN-----------GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK---- 410
                 N           G  +L ++   +  E    +  I  R       +        
Sbjct: 230 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQH 289

Query: 411 -----AAQLAAHCLSRDPKARPLMSEVVE 434
                A       L  D ++R    E +E
Sbjct: 290 LVSPEALDFLDKLLRYDHQSRLTAREAME 318

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 7e-27
 Identities = 60/338 (17%), Positives = 105/338 (31%), Gaps = 76/338 (22%)

Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEV 186
           + ++    +G G  G V   +                VA+K L+         K    E+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAY---------DAVLDRNVAIKKLSRPFQNQTHAKRAYREL 67

Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
             +  + H N++ L+          E     LV E M     +                 
Sbjct: 68  VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL----DHERMSY 123

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +      G+  LH      +I+RD K SNI++                           D
Sbjct: 124 LLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK-------------------------SD 155

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFGLA+           T  + T  Y APE ++        D++S G ++ EM+
Sbjct: 156 CTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

Query: 361 TGR----------------RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRL----- 399
             +                  +    P     L    R ++  R ++  L  P+L     
Sbjct: 213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL 272

Query: 400 ---EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
              +   +   A +A  L +  L  DP  R  + + ++
Sbjct: 273 FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 7e-25
 Identities = 65/355 (18%), Positives = 121/355 (34%), Gaps = 65/355 (18%)

Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAE 185
              ++  S +G G +G V   +            TGL VAVK L+         K    E
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRE 67

Query: 186 VNFLGDLVHLNLVKLIGYC-----IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
           +  L  + H N++ L+        +E+   + +   +    L N +  +   L       
Sbjct: 68  LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQF 125

Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
           +     +GL ++H      +I+RD K SN+ ++                         +D
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVN-------------------------ED 157

Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
              K+ DFGLA+   +    +V+TR    +  A    +   H     D++S G ++ E+L
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213

Query: 361 TGRRSMDKN----------RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS---IKG 407
           TGR                R  G        +      R + + +    + +F+   I  
Sbjct: 214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 273

Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASSSYYFQTMQAERI 460
              A  L    L  D   R   ++ +         +  D   +  Y Q+ ++  +
Sbjct: 274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 328

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  100 bits (250), Expect = 6e-24
 Identities = 56/360 (15%), Positives = 103/360 (28%), Gaps = 86/360 (23%)

Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
            + D +     +     LG G F  V+      N T          VA+K +  D +   
Sbjct: 9   PYKDAR-----YILVRKLGWGHFSTVWLAKDMVNNT---------HVAMKIVRGDKVY-T 53

Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVY---------------EFMPRGSLEN 224
           +    E+  L  +   +  K          +LL +               E +    L  
Sbjct: 54  EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 113

Query: 225 HLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG 284
                   +P     +I+     GL ++H      +I+ D K  N+L++           
Sbjct: 114 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLME----------- 160

Query: 285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT 344
                          D    L    +A  G         T  + T  Y +PE ++     
Sbjct: 161 -------------IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWG 207

Query: 345 SRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR---------------------- 382
             +D++S   ++ E++TG    + +  +      +                         
Sbjct: 208 CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT 267

Query: 383 --PHLGERRRFYRLIDPRLEG------HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
                G  R   +L    LE        FS   A++ +   +  L  DP+ R     +V 
Sbjct: 268 FFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 62.1 bits (150), Expect = 8e-12
 Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 41/183 (22%)

Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH 194
            L+GEG    VF  + E+ G   VK       + K +      G   +            
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 195 LNLVKLIGYCIED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
             L KL G  +      +   ++ E +    L                 ++     + +A
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV--------RVENPDEVLDMILEEVA 117

Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
             +    R +++ D    N+L+                           +    + DF  
Sbjct: 118 KFY---HRGIVHGDLSQYNVLVS--------------------------EEGIWIIDFPQ 148

Query: 311 AKD 313
           + +
Sbjct: 149 SVE 151

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	511
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.51
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.78
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.64
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.48
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.29
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.72
d1qu6a2	89	dsRNA-dependent protein kinase pkr {Human (Homo sa	92.69
d1x48a1	76	dsRNA-dependent protein kinase pkr {Mouse (Mus mus	92.48
d1x49a1	85	dsRNA-dependent protein kinase pkr {Mouse (Mus mus	85.24
d1qu6a1	90	dsRNA-dependent protein kinase pkr {Human (Homo sa	82.67
d1x47a1	85	Dgcr8 protein {Human (Homo sapiens) [TaxId: 9606]}	80.11

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-58  Score=445.17  Aligned_cols=255  Identities=25%  Similarity=0.340  Sum_probs=207.2

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~   74 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRV---------TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE   74 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECC---------CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeecc
Confidence            3579999999999999999999876         6889999999765432 33568899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..|||||||++|+|.++|.. ...+++..++.++.||+.||+|||+++   ||||||||+||||+             
T Consensus        75 ~~~~~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~-------------  137 (271)
T d1nvra_          75 GNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLD-------------  137 (271)
T ss_dssp             TTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC-------------
T ss_pred             CceeEEEEeccCCCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEEC-------------
Confidence            9999999999999999999854 457999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~elltg~~p  365 (511)
                                  +++.+||+|||+|+...........+..+||+.|||||++.+..+ +.++|||||||+||||++|+.|
T Consensus       138 ------------~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~p  205 (271)
T d1nvra_         138 ------------ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP  205 (271)
T ss_dssp             ------------TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCC
Confidence                        477899999999997655443334455789999999999988876 6789999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.......... .....     ..         .........+.++.+||.+||+.||.+|||+.|++++
T Consensus       206 f~~~~~~~~~~-~~~~~-----~~---------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         206 WDQPSDSCQEY-SDWKE-----KK---------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             CSSSSTTSHHH-HHHHT-----TC---------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCCChHHHHH-HHHhc-----CC---------CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            97654322111 11100     00         0000111235678899999999999999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-58  Score=444.98  Aligned_cols=261  Identities=28%  Similarity=0.459  Sum_probs=204.8

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGY  203 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~  203 (511)
                      +..++|++.+.||+|+||+||+|+++.            .||||+++....  ...+.|.+|+.+|++++|||||+++++
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~~------------~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~   72 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWHG------------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY   72 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESSS------------EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEECC------------EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEE
Confidence            345789999999999999999997642            699999975532  334678999999999999999999998


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +. .+.++||||||++|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+          
T Consensus        73 ~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~----------  138 (276)
T d1uwha_          73 ST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLH----------  138 (276)
T ss_dssp             EC-SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE----------
T ss_pred             Ee-ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEc----------
Confidence            75 45689999999999999999877778999999999999999999999988   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc---CCCCccccchhHHHHHHHHH
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DIwSlGvil~ell  360 (511)
                                     .++.+||+|||+|+...............||+.|||||++.+   ..|+.++|||||||+||||+
T Consensus       139 ---------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~  203 (276)
T d1uwha_         139 ---------------EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM  203 (276)
T ss_dssp             ---------------TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHH
Confidence                           478899999999987655443334456789999999999864   45899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||+.||.+......  +........         ..+. ....+..+++.+.+||.+||+.||.+||||.+|+++|+.+
T Consensus       204 tg~~Pf~~~~~~~~--~~~~~~~~~---------~~p~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         204 TGQLPYSNINNRDQ--IIFMVGRGY---------LSPD-LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             HSSCTTTTCCCHHH--HHHHHHHTS---------CCCC-GGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HCCCCCCCCChHHH--HHHHHhcCC---------CCCc-chhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            99999976533211  111111100         0010 0112223457899999999999999999999999999765

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-57  Score=442.62  Aligned_cols=251  Identities=24%  Similarity=0.353  Sum_probs=210.1

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+++
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~---------~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   90 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVA---------TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTT---------TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cccEEEEEEecCcCcEEEEEEECC---------CCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECC
Confidence            579999999999999999999865         68899999998765556678999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .+|||||||++|+|.+++...  .+++..++.|+.||+.||+|||+++   ||||||||+||||+               
T Consensus        91 ~~~ivmEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~---------------  150 (293)
T d1yhwa1          91 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLG---------------  150 (293)
T ss_dssp             EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC---------------
T ss_pred             EEEEEEEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEEC---------------
Confidence            999999999999999988653  6899999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                .++.+||+|||+|+........  ....+||+.|||||++.+..|+.++|||||||+||||++|+.||.+
T Consensus       151 ----------~~~~vkl~DFG~a~~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~  218 (293)
T d1yhwa1         151 ----------MDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (293)
T ss_dssp             ----------TTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ----------CCCcEeeccchhheeecccccc--ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCC
Confidence                      4778999999999876543322  3446899999999999999999999999999999999999999975


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......  +......   .        .+  ....+...+..+.+||.+||+.||.+|||+.|++++
T Consensus       219 ~~~~~~--~~~~~~~---~--------~~--~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         219 ENPLRA--LYLIATN---G--------TP--ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             SCHHHH--HHHHHHH---C--------SC--CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CCHHHH--HHHHHhC---C--------CC--CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            432111  1111000   0        00  011122335789999999999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-57  Score=434.41  Aligned_cols=247  Identities=26%  Similarity=0.404  Sum_probs=207.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|+++.         +++.||||++....   ......+.+|+.+|++++|||||++++++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~   76 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH   76 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECC---------CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence            479999999999999999999876         67899999996432   233467889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++..|||||||++|+|.+++... ..+++..+..|+.||+.||+|||+++   ||||||||+||||+            
T Consensus        77 ~~~~~~ivmEy~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~------------  140 (263)
T d2j4za1          77 DATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLG------------  140 (263)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC------------
T ss_pred             ECCEEEEEEeecCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceec------------
Confidence            999999999999999999999654 46999999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+|+......    .....||+.|||||++.+..|+.++|||||||+||||++|+.|
T Consensus       141 -------------~~~~~kl~DFG~a~~~~~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~P  203 (263)
T d2j4za1         141 -------------SAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP  203 (263)
T ss_dssp             -------------TTSCEEECCCCSCSCCCCCC----CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             -------------CCCCEeecccceeeecCCCc----ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCC
Confidence                         47789999999998765432    2346899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+....   .+.....   ..        .    ..++...++++.+||.+||+.||.+|||+.||+++
T Consensus       204 f~~~~~~---~~~~~i~---~~--------~----~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         204 FEANTYQ---ETYKRIS---RV--------E----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             TCCSSHH---HHHHHHH---TT--------C----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CCCCCHH---HHHHHHH---cC--------C----CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            9754321   1111110   00        0    11122235788999999999999999999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-57  Score=444.83  Aligned_cols=264  Identities=25%  Similarity=0.377  Sum_probs=217.2

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEee
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      .+++..++|++.+.||+|+||+||+|+++.         +++.||||+++.+.. ..++|.+|+.+|++++|||||++++
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~---------~~~~vAvK~i~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~   80 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKK---------YSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLG   80 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGG---------GTEEEEEEECCTTCS-CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECC---------CCeEEEEEEECCccc-hHHHHHHHHHHHHhCCCCCEecCCc
Confidence            344455789999999999999999999876         678999999976543 4577999999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +|.+++..+||||||++|+|.+++... ...+++..++.|+.||+.||+|||+++   ||||||||+||||+        
T Consensus        81 ~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~--------  149 (287)
T d1opja_          81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVG--------  149 (287)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC--------
T ss_pred             cEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEEC--------
Confidence            999999999999999999999999753 457899999999999999999999998   99999999999998        


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       .++.+||+|||+|+........ ..+...||+.|||||++.+..|+.++|||||||++|||++
T Consensus       150 -----------------~~~~~Kl~DFG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~  211 (287)
T d1opja_         150 -----------------ENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  211 (287)
T ss_dssp             -----------------GGGCEEECCCCCTTTCCSSSSE-EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred             -----------------CCCcEEEccccceeecCCCCce-eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHh
Confidence                             4778999999999976554322 2334568999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  441 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~~  441 (511)
                      |..||......  ..+...+.              .......+..+++.+.+||.+||+.||.+|||+.+|++.|+.+.+
T Consensus       212 ~~~p~~~~~~~--~~~~~~i~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         212 YGMSPYPGIDL--SQVYELLE--------------KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             TSCCSSTTCCH--HHHHHHHH--------------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             CCCCCCCcchH--HHHHHHHh--------------cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            87776543221  11111111              111222233345789999999999999999999999999987643

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-57  Score=442.34  Aligned_cols=253  Identities=25%  Similarity=0.384  Sum_probs=209.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      +.|++++.||+|+||+||+|+++.         +++.||||+++.......+.+.+|+++|++|+|||||++++++.+++
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   82 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN   82 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECC---------CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC
Confidence            468999999999999999999876         67899999998766566677899999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..+||||||++|+|.+++.+....+++..+..++.||+.||.|||+++   ||||||||+||||+               
T Consensus        83 ~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~---------------  144 (288)
T d2jfla1          83 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFT---------------  144 (288)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC---------------
T ss_pred             eEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeEC---------------
Confidence            999999999999999998766678999999999999999999999999   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc-----cCCCCccccchhHHHHHHHHHhCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTGR  363 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DIwSlGvil~elltg~  363 (511)
                                .++.+||+|||+|+.......  .....+||+.|||||++.     +..|+.++|||||||+||||++|+
T Consensus       145 ----------~~~~~Kl~DFG~a~~~~~~~~--~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~  212 (288)
T d2jfla1         145 ----------LDGDIKLADFGVSAKNTRTIQ--RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE  212 (288)
T ss_dssp             ----------TTSCEEECCCTTCEECHHHHH--HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------CCCCEEEEechhhhccCCCcc--cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCC
Confidence                      477899999999976432211  123467999999999984     456899999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .||.+.......  .....    ...       +  ....+...++++.+||.+||+.||.+|||+.|++++
T Consensus       213 ~Pf~~~~~~~~~--~~i~~----~~~-------~--~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         213 PPHHELNPMRVL--LKIAK----SEP-------P--TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             CTTTTSCGGGHH--HHHHH----SCC-------C--CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             CCCCCCCHHHHH--HHHHc----CCC-------C--CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            999765432211  11110    000       0  011122345789999999999999999999999874

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-57  Score=435.37  Aligned_cols=255  Identities=27%  Similarity=0.427  Sum_probs=199.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++++.||+|+||+||+|++..          +..||||+++... ...++|.+|+.+|++++|||||+++|+|..++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~----------~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~   73 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLN----------KDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA   73 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETT----------TEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECC----------CCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCC
Confidence            478889999999999999999853          5689999998654 34578999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      ..+||||||++|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+               
T Consensus        74 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~---------------  135 (263)
T d1sm2a_          74 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG---------------  135 (263)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEEC---------------
T ss_pred             ceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeec---------------
Confidence            999999999999999999877778999999999999999999999998   99999999999999               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                +++.+||+|||+++........ ......||+.|||||++.+..|+.++|||||||+||||+|+..|+..
T Consensus       136 ----------~~~~~Kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~  204 (263)
T d1sm2a_         136 ----------ENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE  204 (263)
T ss_dssp             ----------GGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             ----------CCCCeEecccchheeccCCCce-eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCC
Confidence                      4778999999999876543322 23345799999999999999999999999999999999996544433


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ...  ...+...+...              .....+..+++++.+||.+||+.||.+|||+++|+++|+.+
T Consensus       205 ~~~--~~~~~~~i~~~--------------~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         205 NRS--NSEVVEDISTG--------------FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             SCC--HHHHHHHHHHT--------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC--HHHHHHHHHhc--------------CCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            221  11121111110              01111223357889999999999999999999999999765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-57  Score=436.24  Aligned_cols=254  Identities=22%  Similarity=0.328  Sum_probs=195.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc--HHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||++.......  .+.+.+|+++|++++|||||++++++.+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   74 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKS---------DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID   74 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC
T ss_pred             hhCEEeEEEecCCCeEEEEEEECC---------CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEe
Confidence            579999999999999999999876         68899999998765432  3468899999999999999999999865


Q ss_pred             --CCeEEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEecccCCCcEEeccccccc
Q 010432          207 --DDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEA--ERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       207 --~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~--~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                        ++.+|||||||++|+|.+++.+   ....+++..++.++.||+.||+|||+++  ..+||||||||+||||+      
T Consensus        75 ~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~------  148 (269)
T d2java1          75 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD------  148 (269)
T ss_dssp             ----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC------
T ss_pred             CCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC------
Confidence              4568999999999999999863   3457999999999999999999999854  13499999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                         .++.+||+|||+|+.......  .....+||+.|||||++.+..|+.++|||||||+||||
T Consensus       149 -------------------~~~~vkl~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel  207 (269)
T d2java1         149 -------------------GKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL  207 (269)
T ss_dssp             -------------------TTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCcEEEeeccceeecccCCC--ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHH
Confidence                               478899999999997654322  23457899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +||+.||.....   ..+...+..   .  .         ...++...++++.+||.+||+.||.+|||+.||+++
T Consensus       208 ~tg~~Pf~~~~~---~~~~~~i~~---~--~---------~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         208 CALMPPFTAFSQ---KELAGKIRE---G--K---------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             HHSSCSCCCSSH---HHHHHHHHH---T--C---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhCCCCCCCCCH---HHHHHHHHc---C--C---------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            999999975432   111111110   0  0         001122335789999999999999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.1e-56  Score=439.43  Aligned_cols=260  Identities=25%  Similarity=0.415  Sum_probs=201.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      ++|++.++||+|+||+||+|+++.++.      ....||||.+...... ..+.|.+|+.+|++|+|||||++++++..+
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~   99 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGK------REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS   99 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---------CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCC------EEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence            467788999999999999999875322      2347999998765433 345799999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..+||||||++|+|.+++......+++..++.|+.||+.||.|||+++   ||||||||+||||+              
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~--------------  162 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVN--------------  162 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC--------------
T ss_pred             CEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEEC--------------
Confidence            9999999999999999999877778999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCccee---eeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHV---STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~---~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                 .++.+||+|||+|+..........   .....||+.|||||++.+..|+.++|||||||+||||+| |+
T Consensus       163 -----------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~  231 (299)
T d1jpaa_         163 -----------SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE  231 (299)
T ss_dssp             -----------TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             -----------CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCC
Confidence                       478899999999987654322211   122468999999999999999999999999999999998 89


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .||.+....   .+...+..              ......+..++..+.+||.+||+.||.+||||.+|++.|+++
T Consensus       232 ~Pf~~~~~~---~~~~~i~~--------------~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         232 RPYWDMTNQ---DVINAIEQ--------------DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM  290 (299)
T ss_dssp             CTTTTCCHH---HHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHH---HHHHHHHc--------------CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            999764321   12111111              011112233467899999999999999999999999999764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-56  Score=437.05  Aligned_cols=251  Identities=22%  Similarity=0.274  Sum_probs=204.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||++....   ....+.+.+|+++|++++|||||++++++.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~   78 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELA---------TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ   78 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE
Confidence            579999999999999999999876         67899999997532   223467899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++.+|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+|||++            
T Consensus        79 ~~~~~~ivmEy~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~------------  142 (288)
T d1uu3a_          79 DDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN------------  142 (288)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC------------
T ss_pred             ECCEEEEEEEccCCCCHHHhhhcc-CCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccC------------
Confidence            999999999999999999988654 47999999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||+|+..............+||+.|||||++.+..|+.++|||||||+||||++|+.|
T Consensus       143 -------------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~P  209 (288)
T d1uu3a_         143 -------------EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP  209 (288)
T ss_dssp             -------------TTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCC
Confidence                         4778999999999977554433334457899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |.+....   .+...+   ....        .    .++...++++.+||.+||+.||.+|||+.|++++
T Consensus       210 f~~~~~~---~~~~~i---~~~~--------~----~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         210 FRAGNEY---LIFQKI---IKLE--------Y----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             SCCSSHH---HHHHHH---HTTC--------C----CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             CCCcCHH---HHHHHH---HcCC--------C----CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence            9764321   111111   1000        0    1122335778999999999999999999997653

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-56  Score=428.66  Aligned_cols=249  Identities=25%  Similarity=0.376  Sum_probs=199.1

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe---
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE---  206 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~---  206 (511)
                      ++.+.||+|+||+||+|++..         ++..||||++......  ..+.+.+|+++|++++|||||++++++..   
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~---------~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   82 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTE---------TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK   82 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred             EeeeEEecCcCcEEEEEEECC---------CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccc
Confidence            556689999999999999876         6789999999765322  33568899999999999999999999875   


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       +..+|||||||++|+|.+++.+. ..+++..++.++.||+.||+|||+++ .+||||||||+||||+.           
T Consensus        83 ~~~~~~ivmE~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~-----------  149 (270)
T d1t4ha_          83 GKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITG-----------  149 (270)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESS-----------
T ss_pred             cCCEEEEEEeCCCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeC-----------
Confidence             35679999999999999999654 47899999999999999999999876 56999999999999963           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +++.+||+|||+|+......    ....+||+.|||||++.+ .|+.++|||||||+||||++|+.|
T Consensus       150 -------------~~~~~Kl~DFGla~~~~~~~----~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~P  211 (270)
T d1t4ha_         150 -------------PTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  211 (270)
T ss_dssp             -------------TTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             -------------CCCCEEEeecCcceeccCCc----cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCC
Confidence                         36789999999998654322    334689999999998865 699999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |......  ..+...+....             ....++...++++.+||.+||+.||++|||+.|++++
T Consensus       212 f~~~~~~--~~~~~~i~~~~-------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         212 YSECQNA--AQIYRRVTSGV-------------KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             TTTCSSH--HHHHHHHTTTC-------------CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCcccH--HHHHHHHHcCC-------------CCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            9754321  11111111100             0011111224678999999999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-56  Score=445.87  Aligned_cols=267  Identities=24%  Similarity=0.333  Sum_probs=206.5

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ..++|+++++||+|+||+||+|+++.         +|+.||||+++..... ....+.+|+.+|++++|||||+++++|.
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~   74 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKP---------SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY   74 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETT---------TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECC---------CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            35689999999999999999999875         6889999999765333 3457899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      +++.+|||||||++|+|.+++.+. ..+++..+..++.||+.||.|||+ ++   ||||||||+||||+           
T Consensus        75 ~~~~~~iVmEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~-----------  139 (322)
T d1s9ja_          75 SDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVN-----------  139 (322)
T ss_dssp             CSSEEEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEEC-----------
T ss_pred             ECCEEEEEEEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeEC-----------
Confidence            999999999999999999999654 469999999999999999999997 47   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    +++.+||+|||+|+......    .+..+||+.|||||++.+..|+.++||||||||+|||++|+.
T Consensus       140 --------------~~~~vkl~DFGla~~~~~~~----~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~  201 (322)
T d1s9ja_         140 --------------SRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY  201 (322)
T ss_dssp             --------------TTCCEEECCCCCCHHHHHHT----C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeeCCCccccCCCc----cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence                          47789999999998653321    234689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHH-Hhhhhhhccc---------------------cc----cccccCCccCCCCCHHHHHHHHHHHHHh
Q 010432          365 SMDKNRPNGEHNLV-EWARPHLGER---------------------RR----FYRLIDPRLEGHFSIKGAQKAAQLAAHC  418 (511)
Q Consensus       365 pf~~~~~~~~~~~~-~~~~~~~~~~---------------------~~----~~~~~~~~~~~~~~~~~~~~~~~Li~~c  418 (511)
                      ||.+.......... ..........                     ..    .................+.++.+||.+|
T Consensus       202 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~  281 (322)
T d1s9ja_         202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC  281 (322)
T ss_dssp             CSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHH
Confidence            99765432110000 0000000000                     00    0000000000000111246789999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 010432          419 LSRDPKARPLMSEVVEA  435 (511)
Q Consensus       419 l~~dP~~RPs~~eil~~  435 (511)
                      |+.||.+|||+.|++++
T Consensus       282 L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         282 LIKNPAERADLKQLMVH  298 (322)
T ss_dssp             TCSSTTTSCCHHHHHTS
T ss_pred             cCCChhHCcCHHHHhhC
Confidence            99999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=7.6e-56  Score=444.17  Aligned_cols=256  Identities=21%  Similarity=0.292  Sum_probs=213.4

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||++........+.+.+|+.+|++|+|||||++++++.++
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~---------~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   95 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERA---------TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD   95 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT---------TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECC---------CCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3589999999999999999999876         6889999999876655556789999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|||||||++|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+..            
T Consensus        96 ~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~------------  160 (350)
T d1koaa2          96 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTK------------  160 (350)
T ss_dssp             TEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESST------------
T ss_pred             CEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccC------------
Confidence            9999999999999999999766667999999999999999999999999   9999999999999731            


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 .++.+||+|||+|+.......   .....||+.|||||++.+..|+.++|||||||++|||++|+.||.
T Consensus       161 -----------~~~~vkL~DFG~a~~~~~~~~---~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~  226 (350)
T d1koaa2         161 -----------RSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG  226 (350)
T ss_dssp             -----------TSCCEEECCCTTCEECCTTSC---EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -----------CCCeEEEeecchheecccccc---cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCC
Confidence                       256799999999997655432   344689999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +....   .....+.   .....        +........++.+.+||.+||+.||.+|||+.|++++
T Consensus       227 ~~~~~---~~~~~i~---~~~~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         227 GENDD---ETLRNVK---SCDWN--------MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CSSHH---HHHHHHH---HTCCC--------SCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CCCHH---HHHHHHH---hCCCC--------CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            54321   1111111   00000        0111111235678999999999999999999999996

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-55  Score=424.19  Aligned_cols=254  Identities=22%  Similarity=0.371  Sum_probs=213.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|+++++||+|+||+||+|+++          ++..||||+++.... ..++|++|+.++++++|||||+++|+|.+++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~----------~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~   72 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR   72 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET----------TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC----------CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Confidence            58999999999999999999985          367899999987654 3468999999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .+++|||||++|+|.+++......+++..++.++.||+.||.|||+++   |+||||||+|||++               
T Consensus        73 ~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~---------------  134 (258)
T d1k2pa_          73 PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVN---------------  134 (258)
T ss_dssp             SEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEEC---------------
T ss_pred             ceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEc---------------
Confidence            999999999999999998777778999999999999999999999998   99999999999998               


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMD  367 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~  367 (511)
                                .++.+||+|||+++........ ......||+.|+|||++.+..|+.++|||||||++|||+| |+.||.
T Consensus       135 ----------~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~  203 (258)
T d1k2pa_         135 ----------DQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE  203 (258)
T ss_dssp             ----------TTCCEEECCCSSCCBCSSSSCC-CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ----------CCCcEEECcchhheeccCCCce-eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCC
Confidence                      4788999999999876554332 2334679999999999999999999999999999999998 899997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .....   .+...+..    .          .....+...++.+.+||.+||+.||++|||+.+|+++|..+
T Consensus       204 ~~~~~---~~~~~i~~----~----------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         204 RFTNS---ETAEHIAQ----G----------LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             TSCHH---HHHHHHHT----T----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             CCCHH---HHHHHHHh----C----------CCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            65321   12111111    0          01112223357899999999999999999999999998643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.6e-56  Score=436.66  Aligned_cols=256  Identities=21%  Similarity=0.310  Sum_probs=194.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .+.|++.+.||+|+||+||+|+++.         +++.||||++...... ....+.+|+.+|++++|||||++++++.+
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~   78 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKR---------TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES   78 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETT---------TCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECC---------CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            3579999999999999999999876         6789999999765432 23457899999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++.+|||||||+||+|.++|.. ...+++..+..++.||+.||+|||+++   ||||||||+|||+....          
T Consensus        79 ~~~~~lvmE~~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~----------  144 (307)
T d1a06a_          79 GGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLD----------  144 (307)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHT-CSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSS----------
T ss_pred             CCEEEEEEeccCCCcHHHhhhc-ccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccC----------
Confidence            9999999999999999999965 457999999999999999999999998   99999999999997421          


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +++.+||+|||+|+.......   ....+||+.|||||++.+..|+.++|||||||+||||++|+.||
T Consensus       145 ------------~~~~vkl~DFG~a~~~~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf  209 (307)
T d1a06a_         145 ------------EDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF  209 (307)
T ss_dssp             ------------TTCCEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ------------CCceEEEeccceeEEccCCCe---eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCC
Confidence                        367899999999987644322   33468999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+....   .+......   ..        ..+........++++.+||.+||+.||.+|||+.|++++
T Consensus       210 ~~~~~~---~~~~~i~~---~~--------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         210 YDENDA---KLFEQILK---AE--------YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             CCSSHH---HHHHHHHT---TC--------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCCCHH---HHHHHHhc---cC--------CCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            754321   11111110   00        001111222345789999999999999999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-55  Score=430.43  Aligned_cols=257  Identities=25%  Similarity=0.381  Sum_probs=207.9

Q ss_pred             cCCCCCCc-cccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESL-LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~-lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|.+.+. ||+|+||+||+|.++..+       ++..||||+++..... ..+.|.+|+++|++++|||||++++++..
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~-------~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~   80 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRK-------KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA   80 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC----------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCC-------CcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc
Confidence            45666664 999999999999886422       4568999999765433 34679999999999999999999999865


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                       +.+|||||||++|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+             
T Consensus        81 -~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~-------------  143 (285)
T d1u59a_          81 -EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLV-------------  143 (285)
T ss_dssp             -SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEE-------------
T ss_pred             -CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeec-------------
Confidence             5689999999999999998776678999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                  .++.+||+|||+|+......... ......||+.|||||++.+..++.++|||||||+||||+| |+.
T Consensus       144 ------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~  211 (285)
T d1u59a_         144 ------------NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK  211 (285)
T ss_dssp             ------------ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ------------cCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCC
Confidence                        47789999999999775543322 2234578999999999999999999999999999999998 899


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      ||......   .+...+..              ......+..+++++.+||.+||+.||++||||.+|++.|+.
T Consensus       212 Pf~~~~~~---~~~~~i~~--------------~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         212 PYKKMKGP---EVMAFIEQ--------------GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             TTTTCCTH---HHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCHH---HHHHHHHc--------------CCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            99765322   12211111              00112223345789999999999999999999999998863

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.1e-55  Score=441.30  Aligned_cols=255  Identities=20%  Similarity=0.287  Sum_probs=213.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeCC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD  208 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~  208 (511)
                      ++|++++.||+|+||+||+|++..         +|+.||||+++.........+.+|+.+|++|+|||||+++++|.+++
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~---------~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~   99 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKA---------TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY   99 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred             cceEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            479999999999999999999875         68899999998765555567889999999999999999999999999


Q ss_pred             eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeee
Q 010432          209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY  288 (511)
Q Consensus       209 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~  288 (511)
                      .+|||||||++|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+..             
T Consensus       100 ~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~-------------  163 (352)
T d1koba_         100 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETK-------------  163 (352)
T ss_dssp             EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESST-------------
T ss_pred             EEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccccccccccccc-------------
Confidence            999999999999999988777778999999999999999999999999   9999999999999731             


Q ss_pred             ccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 010432          289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  368 (511)
Q Consensus       289 ~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~  368 (511)
                                .++.+||+|||+|+.......   .....||+.|||||++.+..|+.++|||||||+||||+||+.||.+
T Consensus       164 ----------~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  230 (352)
T d1koba_         164 ----------KASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG  230 (352)
T ss_dssp             ----------TCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             ----------CCCeEEEeecccceecCCCCc---eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence                      257899999999998765432   3446799999999999999999999999999999999999999975


Q ss_pred             CCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ....   .....+..   .        ...+........++++.+||.+||+.||.+|||+.|++++
T Consensus       231 ~~~~---~~~~~i~~---~--------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         231 EDDL---ETLQNVKR---C--------DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             SSHH---HHHHHHHH---C--------CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCHH---HHHHHHHh---C--------CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4321   11111110   0        0011111122335788999999999999999999999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-55  Score=439.96  Aligned_cols=263  Identities=25%  Similarity=0.389  Sum_probs=211.6

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.++||+|+||+||+|++...+.    ......||||.+..... .....+.+|+.+|.++ +|||||++++++
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISK----TGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSS----SSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCc----ccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            34679999999999999999999875322    11345799999965432 3345789999999998 899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS----------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIY  262 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~----------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiH  262 (511)
                      .+.+..+||||||++|+|.++|..+.                      ..+++..++.|+.||+.||+|||+++   |||
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiH  187 (325)
T d1rjba_         111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVH  187 (325)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred             eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eee
Confidence            99999999999999999999996542                      24889999999999999999999998   999


Q ss_pred             cccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC
Q 010432          263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH  342 (511)
Q Consensus       263 rDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~  342 (511)
                      |||||+|||++                         .++.+||+|||+|+...............||+.|||||++.+..
T Consensus       188 RDlKp~Nill~-------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  242 (325)
T d1rjba_         188 RDLAARNVLVT-------------------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  242 (325)
T ss_dssp             TTCSGGGEEEE-------------------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             ccCchhccccc-------------------------cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCC
Confidence            99999999998                         47889999999998766554444445567899999999999999


Q ss_pred             CCccccchhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhccc
Q 010432          343 LTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR  421 (511)
Q Consensus       343 ~~~~~DIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~  421 (511)
                      |+.++|||||||+||||+| |+.||.+.....  .+.....              .......+..+++.+.+||.+||+.
T Consensus       243 ~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~--~~~~~~~--------------~~~~~~~p~~~~~~l~~li~~cl~~  306 (325)
T d1rjba_         243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--NFYKLIQ--------------NGFKMDQPFYATEEIYIIMQSCWAF  306 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHH--------------TTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCcceeccchhHHHHHHHhCCCCCCCCCCHHH--HHHHHHh--------------cCCCCCCCCcCCHHHHHHHHHHcCC
Confidence            9999999999999999998 899997654321  1111111              1111222333467899999999999


Q ss_pred             CCCCCCCHHHHHHHhc
Q 010432          422 DPKARPLMSEVVEALK  437 (511)
Q Consensus       422 dP~~RPs~~eil~~L~  437 (511)
                      ||++|||++||+++|.
T Consensus       307 dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         307 DSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SGGGSCCHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHh
Confidence            9999999999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-55  Score=433.87  Aligned_cols=247  Identities=26%  Similarity=0.371  Sum_probs=202.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +.|++++.||+|+||+||+|++..         +|+.||||++.......   .+.+.+|+.+|++|+|||||++++++.
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~   85 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVR---------NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL   85 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETT---------TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECC---------CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEE
Confidence            358999999999999999999876         68899999998665432   246889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++..|||||||.+|+|..++.. ...+++..++.|+.||+.||.|||+++   ||||||||+||||+            
T Consensus        86 ~~~~~~iv~E~~~~g~l~~~~~~-~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~------------  149 (309)
T d1u5ra_          86 REHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLS------------  149 (309)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEE------------
T ss_pred             ECCEEEEEEEecCCCchHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEC------------
Confidence            99999999999999998766644 357999999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc---CCCCccccchhHHHHHHHHHhC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DIwSlGvil~elltg  362 (511)
                                   .++.+||+|||+|+.....      ...+||+.|||||++.+   ..|+.++|||||||++|||++|
T Consensus       150 -------------~~~~~Kl~DFG~a~~~~~~------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g  210 (309)
T d1u5ra_         150 -------------EPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (309)
T ss_dssp             -------------TTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             -------------CCCCEEEeecccccccCCC------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHC
Confidence                         4778999999999875432      33579999999999864   4689999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      +.||.+....   .....   ....       ..+   ...+...++.+.+||.+||+.||.+|||+.+++++
T Consensus       211 ~~Pf~~~~~~---~~~~~---i~~~-------~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         211 KPPLFNMNAM---SALYH---IAQN-------ESP---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             SCTTTTSCHH---HHHHH---HHHS-------CCC---CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCCCCHH---HHHHH---HHhC-------CCC---CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            9999754321   11100   0000       000   11112235789999999999999999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-56  Score=430.89  Aligned_cols=256  Identities=27%  Similarity=0.411  Sum_probs=206.2

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      +..++|++.+.||+|+||+||+|+++          ++..||||+++... ...+.|.+|+.+|++++|||||++++++.
T Consensus        10 i~~~~~~~~~~iG~G~fg~Vy~~~~~----------~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~   78 (272)
T d1qpca_          10 VPRETLKLVERLGAGQFGEVWMGYYN----------GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT   78 (272)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET----------TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cCHHHeEEeEEEecCCCcEEEEEEEC----------CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec
Confidence            34568999999999999999999975          35689999997654 34567999999999999999999999875


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                       ++..+||||||++|+|.+++... ...+++..++.|+.||+.||.|||+++   ||||||||+||||+           
T Consensus        79 -~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~-----------  143 (272)
T d1qpca_          79 -QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVS-----------  143 (272)
T ss_dssp             -SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------
T ss_pred             -cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeee-----------
Confidence             45679999999999999987533 235899999999999999999999988   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    +++.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||+||||+||..
T Consensus       144 --------------~~~~~Kl~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~  208 (272)
T d1qpca_         144 --------------DTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR  208 (272)
T ss_dssp             --------------TTSCEEECCCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTC
T ss_pred             --------------cccceeeccccceEEccCCcc-ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCC
Confidence                          478899999999998755332 22344679999999999999999999999999999999999766


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      |+.....  ...+...+..              ......+..+++++.+||.+||+.||++||||.+|++.|+.
T Consensus       209 ~~~~~~~--~~~~~~~i~~--------------~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         209 IPYPGMT--NPEVIQNLER--------------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CSSTTCC--HHHHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCC--HHHHHHHHHh--------------cCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            6543321  1111111111              01111222345788999999999999999999999998864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-55  Score=423.83  Aligned_cols=249  Identities=27%  Similarity=0.375  Sum_probs=198.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEeCCeEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLL  212 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~~~~~~l  212 (511)
                      ++||+|+||+||+|.++..       .+++.||||+++.....  ..+.|.+|+.+|++++|||||+++++|.. +..+|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~-------~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~l   84 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMK-------KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWML   84 (277)
T ss_dssp             EEEEECSSEEEEEEEEECS-------SSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEE
T ss_pred             CCcccCCCeEEEEEEEccC-------CcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEE
Confidence            4699999999999987642       24678999999764332  24579999999999999999999999865 45789


Q ss_pred             EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeecccc
Q 010432          213 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF  292 (511)
Q Consensus       213 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~  292 (511)
                      |||||++|+|.+++... ..+++..++.|+.||+.||+|||+++   ||||||||+||||+                   
T Consensus        85 vmE~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~-------------------  141 (277)
T d1xbba_          85 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLV-------------------  141 (277)
T ss_dssp             EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEE-------------------
T ss_pred             EEEcCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhccc-------------------
Confidence            99999999999998654 47999999999999999999999998   99999999999998                   


Q ss_pred             ccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 010432          293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNR  370 (511)
Q Consensus       293 ~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf~~~~  370 (511)
                            .++.+||+|||+|+......... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus       142 ------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~  215 (277)
T d1xbba_         142 ------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK  215 (277)
T ss_dssp             ------ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             ------ccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC
Confidence                  47889999999998765443322 2334579999999999999999999999999999999998 899997643


Q ss_pred             CCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 010432          371 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  437 (511)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~  437 (511)
                      ..   .+...+..              ......+..++.++.+||.+||+.||.+|||+.+|++.|+
T Consensus       216 ~~---~~~~~i~~--------------~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         216 GS---EVTAMLEK--------------GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             HH---HHHHHHHT--------------TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HH---HHHHHHHc--------------CCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            21   11111111              0111222334578999999999999999999999998875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-55  Score=426.37  Aligned_cols=263  Identities=24%  Similarity=0.392  Sum_probs=204.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      +.|++.++||+|+||+||+|.++..+.     .....||||+++..... ...+|++|+.+|++++|||||+++|++.+.
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~   81 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSG-----KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY   81 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC--------CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCC-----EEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence            467888999999999999999875321     12357999999765433 234689999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++|||||.+|+|.+++......+++..++.++.||+.||+|||+++   ||||||||+||||+              
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~--------------  144 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVN--------------  144 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC--------------
T ss_pred             CceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEEC--------------
Confidence            9999999999999999998877778999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+|+........ .......||+.|||||++.+..|+.++|||||||+||||++|..||
T Consensus       145 -----------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~  213 (283)
T d1mqba_         145 -----------SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP  213 (283)
T ss_dssp             -----------TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -----------CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCc
Confidence                       4788999999999876543222 1233457899999999999999999999999999999999976666


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ......  ..+...+.              .......+..++..+.+||.+||+.||++||||.+|++.|+.+.
T Consensus       214 ~~~~~~--~~~~~~i~--------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~  271 (283)
T d1mqba_         214 YWELSN--HEVMKAIN--------------DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  271 (283)
T ss_dssp             TTTCCH--HHHHHHHH--------------TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cccCCH--HHHHHHHh--------------ccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence            543221  11111111              11122223334678999999999999999999999999997653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-55  Score=426.75  Aligned_cols=257  Identities=23%  Similarity=0.308  Sum_probs=208.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc------ccHHHHHHHHHHHhCCCCCCcceEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL------QGHKEWLAEVNFLGDLVHLNLVKLI  201 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~il~~l~H~nIv~l~  201 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||+++....      ...+.+.+|+.+|++|+|||||+++
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~---------~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~   79 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKS---------TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH   79 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECC---------CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            3579999999999999999999875         688999999975432      1346789999999999999999999


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                      +++.+++.+|||||||++|+|.++|... ..+++..++.++.||+.||+|||+++   ||||||||+|||++..+.    
T Consensus        80 ~~~~~~~~~~iv~E~~~gg~L~~~i~~~-~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~----  151 (293)
T d1jksa_          80 EVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNV----  151 (293)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSS----
T ss_pred             EEEEECCEEEEEEEcCCCccccchhccc-cccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCC----
Confidence            9999999999999999999999999654 47999999999999999999999999   999999999999985221    


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                       ....+||+|||+|+.......   .....||+.|||||++.+..|+.++|||||||+||||++
T Consensus       152 -----------------~~~~vkl~DfG~a~~~~~~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~  211 (293)
T d1jksa_         152 -----------------PKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  211 (293)
T ss_dssp             -----------------SSCCEEECCCTTCEECTTSCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             -----------------cccceEecchhhhhhcCCCcc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHc
Confidence                             234699999999987654432   234679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |+.||.+.....   .......   ....        +........+..+.+||.+||+.||.+|||+.|++++
T Consensus       212 g~~Pf~~~~~~~---~~~~i~~---~~~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         212 GASPFLGDTKQE---TLANVSA---VNYE--------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             SSCSSCCSSHHH---HHHHHHT---TCCC--------CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCCCCCCHHH---HHHHHHh---cCCC--------CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            999997643211   1111100   0000        0000111224678999999999999999999999984

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-54  Score=430.79  Aligned_cols=250  Identities=30%  Similarity=0.366  Sum_probs=208.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++++.||+|+||+||+|+++.         +|+.||||++++..   ....+.+.+|+.+|++++|||||++++++
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~---------~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~   74 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKA---------TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF   74 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECC---------CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeee
Confidence            3579999999999999999999876         78899999997542   23346788999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+++.+|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+||||+           
T Consensus        75 ~~~~~~~iv~ey~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~-----------  139 (337)
T d1o6la_          75 QTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLD-----------  139 (337)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC-----------
T ss_pred             ccccccccceeccCCCchhhhhhcc-cCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEec-----------
Confidence            9999999999999999999998654 47899999999999999999999999   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    .++.+||+|||+|+.......  .....+||+.|||||++.+..|+.++|||||||+||||++|+.
T Consensus       140 --------------~~g~vkl~DFG~a~~~~~~~~--~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~  203 (337)
T d1o6la_         140 --------------KDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL  203 (337)
T ss_dssp             --------------TTSCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCCEEEeecccccccccCCc--ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCC
Confidence                          478899999999997654332  2345789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      ||.+....   .+...   .....        .    .++...++++.+||.+||+.||.+||+     +.+|++|
T Consensus       204 pf~~~~~~---~~~~~---i~~~~--------~----~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         204 PFYNQDHE---RLFEL---ILMEE--------I----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             SSCCSSHH---HHHHH---HHHCC--------C----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCcCHH---HHHHH---HhcCC--------C----CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            99865421   11111   11110        1    112233577899999999999999995     7888764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-55  Score=423.89  Aligned_cols=259  Identities=24%  Similarity=0.358  Sum_probs=200.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      .++|++.+.||+|+||+||+|++...+.      .+..||||.++..... ..+.|.+|+.+|++++|||||++++++. 
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~------~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-   78 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPEN------PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   78 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--------CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCc------eeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            4679999999999999999999875332      4568999999755433 2456899999999999999999999985 


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..+||||||++|+|.+++......+++..++.++.||+.||.|||+++   ||||||||+|||++             
T Consensus        79 ~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~-------------  142 (273)
T d1mp8a_          79 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVS-------------  142 (273)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEE-------------
T ss_pred             cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeec-------------
Confidence            56789999999999999998877778999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~p  365 (511)
                                  .++.+||+|||+|+........ ..+...||+.|+|||++.+..|+.++|||||||+||||++ |.+|
T Consensus       143 ------------~~~~~Kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P  209 (273)
T d1mp8a_         143 ------------SNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  209 (273)
T ss_dssp             ------------ETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------CCCcEEEccchhheeccCCcce-eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCC
Confidence                        4778999999999876543322 2344678999999999999999999999999999999998 8999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |.......   +...+...              ....++..+++.+.+||.+||+.||.+|||+.+|+++|+.+
T Consensus       210 ~~~~~~~~---~~~~i~~~--------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         210 FQGVKNND---VIGRIENG--------------ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             TTTCCGGG---HHHHHHTT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCHHH---HHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            97654322   11111110              01112233457899999999999999999999999998754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-54  Score=427.91  Aligned_cols=260  Identities=23%  Similarity=0.370  Sum_probs=206.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|+++++||+|+||+||+|++..++..     ....||||.++... ....+.|.+|+.+|++++|||||+++++|.++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEK-----VKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC---------CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCE-----EEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4699999999999999999998753221     23479999987543 34457899999999999999999999999865


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                       ..+++|||+.+|+|.+++......+++..++.|+.||+.||+|||+++   ||||||||+||||+              
T Consensus        84 -~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~--------------  145 (317)
T d1xkka_          84 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVK--------------  145 (317)
T ss_dssp             -SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE--------------
T ss_pred             -CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeC--------------
Confidence             567889999999999999887788999999999999999999999998   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~pf  366 (511)
                                 .++.+||+|||+|+...............||+.|||||++.++.|+.++|||||||+||||+| |..||
T Consensus       146 -----------~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~  214 (317)
T d1xkka_         146 -----------TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  214 (317)
T ss_dssp             -----------ETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             -----------CCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCC
Confidence                       477899999999998765544444445679999999999999999999999999999999998 78888


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      .+.....   +...+...              .....+..++..+.+||.+||+.||.+|||+.+|+++|+.+
T Consensus       215 ~~~~~~~---~~~~i~~~--------------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         215 DGIPASE---ISSILEKG--------------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             TTSCGGG---HHHHHHHT--------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCHHH---HHHHHHcC--------------CCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            7543322   11111110              11112223457889999999999999999999999998754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-53  Score=420.80  Aligned_cols=246  Identities=27%  Similarity=0.375  Sum_probs=205.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||+++...   ....+.+.+|+.+|++++|||||++++++.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~---------~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~   74 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRH---------NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ   74 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECC---------CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe
Confidence            579999999999999999999876         68899999997532   233467889999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      +++.+|+|||||+||+|..++... ..+++..+..++.||+.||+|||+++   ||||||||+||||+            
T Consensus        75 ~~~~~~ivmE~~~gg~l~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~------------  138 (316)
T d1fota_          75 DAQQIFMIMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLD------------  138 (316)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEEC------------
T ss_pred             eCCeeeeEeeecCCcccccccccc-ccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEc------------
Confidence            999999999999999999988654 46889999999999999999999998   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||+||||++|+.|
T Consensus       139 -------------~~g~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~P  200 (316)
T d1fota_         139 -------------KNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP  200 (316)
T ss_dssp             -------------TTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             -------------CCCCEEEecCccceEeccc-----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCC
Confidence                         4788999999999986543     2346899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      |.+....   .+...+   ....        .    .++...++++.+|+.+||+.||.+|+     |+++|+++
T Consensus       201 f~~~~~~---~~~~~i---~~~~--------~----~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         201 FYDSNTM---KTYEKI---LNAE--------L----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             TCCSSHH---HHHHHH---HHCC--------C----CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCcCHH---HHHHHH---HcCC--------C----CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            9764321   111111   1100        0    11122356789999999999999996     88998875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-54  Score=424.15  Aligned_cols=268  Identities=25%  Similarity=0.364  Sum_probs=213.8

Q ss_pred             HHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCCCCCCcceEee
Q 010432          124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       124 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~H~nIv~l~~  202 (511)
                      ++...++|++++.||+|+||+||+|+++...    ...++..||||+++..... ..++|.+|+.+|++++||||+++++
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~----~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~   83 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLL----PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLG   83 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSS----TTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCc----cCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCccccee
Confidence            4445678999999999999999999986321    1225678999999765433 2457999999999999999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRS-----------------------LPLPWSIRMKIALGAAKGLAFLHEEAERP  259 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~  259 (511)
                      +|...+..++|||||++|+|.+++....                       ..+++..++.|+.||+.||+|||+++   
T Consensus        84 ~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---  160 (301)
T d1lufa_          84 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---  160 (301)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---
Confidence            9999999999999999999999986431                       24889999999999999999999998   


Q ss_pred             eEecccCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccc
Q 010432          260 VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM  339 (511)
Q Consensus       260 iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~  339 (511)
                      ||||||||+||||+                         .++.+||+|||+|+...........+...||+.|||||++.
T Consensus       161 ivHrDlKp~NILld-------------------------~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (301)
T d1lufa_         161 FVHRDLATRNCLVG-------------------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  215 (301)
T ss_dssp             CCCSCCSGGGEEEC-------------------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             eEeeEEcccceEEC-------------------------CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc
Confidence            99999999999999                         47789999999998665444443445578999999999999


Q ss_pred             cCCCCccccchhHHHHHHHHHhCC-CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHh
Q 010432          340 TGHLTSRSDVYSFGVVLLEMLTGR-RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC  418 (511)
Q Consensus       340 ~~~~~~~~DIwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~c  418 (511)
                      +..|+.++|||||||+||||++|. +||......   .+...+..    ..          ....+...++++.+||.+|
T Consensus       216 ~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~---e~~~~v~~----~~----------~~~~p~~~~~~~~~li~~c  278 (301)
T d1lufa_         216 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE---EVIYYVRD----GN----------ILACPENCPLELYNLMRLC  278 (301)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHHT----TC----------CCCCCTTCCHHHHHHHHHH
T ss_pred             cCCCChhhhhccchhhHHHHHccCCCCCCCCCHH---HHHHHHHc----CC----------CCCCCccchHHHHHHHHHH
Confidence            999999999999999999999996 566543221   11111111    00          1112223356889999999


Q ss_pred             cccCCCCCCCHHHHHHHhcCCC
Q 010432          419 LSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       419 l~~dP~~RPs~~eil~~L~~l~  440 (511)
                      |+.||++||||.+|++.|+++.
T Consensus       279 l~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         279 WSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cCCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999999998763

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-53  Score=420.15  Aligned_cols=255  Identities=18%  Similarity=0.245  Sum_probs=209.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++++.||+|+||+||+|.++.         +++.||||+++.... ....+.+|+++|+.++|||||++++++.++
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~---------~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~   73 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETS---------SKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESM   73 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEET
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC---------CCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            3679999999999999999999876         688999999987643 234678999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +.+|||||||+||+|.++|......+++..++.|+.||+.||+|||+++   ||||||||+|||++..            
T Consensus        74 ~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~------------  138 (321)
T d1tkia_          74 EELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTR------------  138 (321)
T ss_dssp             TEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSS------------
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCC------------
Confidence            9999999999999999999776667999999999999999999999999   9999999999999742            


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  367 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~  367 (511)
                                 +...+||+|||+++.......   .....||+.|+|||.+.+..|+.++|||||||+||||++|..||.
T Consensus       139 -----------~~~~ikl~DFG~~~~~~~~~~---~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~  204 (321)
T d1tkia_         139 -----------RSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             -----------SCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             -----------CceEEEEcccchhhccccCCc---ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCC
Confidence                       245799999999988655332   334679999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ......   +...+   ......+...    ..    ...++++.+||.+||+.||.+|||+.|++++
T Consensus       205 ~~~~~~---~~~~i---~~~~~~~~~~----~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         205 AETNQQ---IIENI---MNAEYTFDEE----AF----KEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CSSHHH---HHHHH---HHTCCCCCHH----HH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCHHH---HHHHH---HhCCCCCChh----hc----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            653211   11111   1000000000    00    0124678999999999999999999999985

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-53  Score=424.02  Aligned_cols=256  Identities=21%  Similarity=0.254  Sum_probs=203.1

Q ss_pred             hcCCCCCC-ccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhC-CCCCCcceEeeEEE
Q 010432          128 TRNFRPES-LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD-LVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~-l~H~nIv~l~~~~~  205 (511)
                      .++|.++. +||+|+||+||+|++..         +++.||||+++..     ..+.+|+.++.+ ++|||||+++++|.
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~---------~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~   75 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKR---------TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYE   75 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECC---------CCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence            35788875 69999999999999876         6889999999743     567889998765 48999999999987


Q ss_pred             e----CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 E----DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~----~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      +    +..+|||||||+||+|.++|..+ ...+++..++.|+.||+.||+|||+++   ||||||||+|||++...    
T Consensus        76 ~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~----  148 (335)
T d2ozaa1          76 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKR----  148 (335)
T ss_dssp             EEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSS----
T ss_pred             ecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC---Ccccccccccccccccc----
Confidence            5    46689999999999999999764 356999999999999999999999999   99999999999998422    


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        +.+.+||+|||+|+.......   ....+||+.|||||++.+..|+.++||||||||||||+
T Consensus       149 ------------------~~~~~Kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~ll  207 (335)
T d2ozaa1         149 ------------------PNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  207 (335)
T ss_dssp             ------------------TTCCEEECCCTTCEECCCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHT
T ss_pred             ------------------ccccccccccceeeeccCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHh
Confidence                              356799999999987655432   23468999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      ||+.||.+..........   ...       .......+........++++.+||.+||+.||++|||+.|++++
T Consensus       208 tg~~Pf~~~~~~~~~~~~---~~~-------i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         208 CGYPPFYSNHGLAISPGM---KTR-------IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             TSSCSCEETTCC-----------C-------CCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hCCCCCCCCCHHHHHHHH---HHH-------HhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            999999765432211100   000       00000011111112346789999999999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-54  Score=418.59  Aligned_cols=256  Identities=26%  Similarity=0.388  Sum_probs=202.0

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .++|++.+.||+|+||+||+|+++.          +..||||+++... ...+.|.+|+.+|++++|||||++++++. +
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~----------~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~   83 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNG----------TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-E   83 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT----------TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECC----------CCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-c
Confidence            4679999999999999999999864          4579999997654 34578999999999999999999999985 4


Q ss_pred             CeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +..++|||||++|+|..++... ...+++..++.|+.||+.||+|||+++   |+||||||+||||+             
T Consensus        84 ~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~-------------  147 (285)
T d1fmka3          84 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVG-------------  147 (285)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC-------------
T ss_pred             CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEEC-------------
Confidence            5689999999999999988643 346999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                  +++.+||+|||+|+........ ......||+.|+|||++....++.++|||||||+||||++|..||
T Consensus       148 ------------~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~  214 (285)
T d1fmka3         148 ------------ENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  214 (285)
T ss_dssp             ------------GGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ------------CCCcEEEcccchhhhccCCCce-eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCC
Confidence                        4778999999999876543322 234467999999999999999999999999999999999977666


Q ss_pred             CCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ......  ..+...+..              ......+..+++++.+||.+||+.||++||++.+|++.|+.+.
T Consensus       215 ~~~~~~--~~~~~~i~~--------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         215 YPGMVN--REVLDQVER--------------GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             STTCCH--HHHHHHHHT--------------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCCCCH--HHHHHHHHh--------------cCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            543221  111111111              0111222334578999999999999999999999999998753

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.9e-53  Score=409.92  Aligned_cols=260  Identities=24%  Similarity=0.319  Sum_probs=201.8

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---HHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      .++|++.+.||+|+||+||+|++..         +|+.||||+++......   ...+.+|+.+|+.++|||||++++++
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~   76 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLR---------LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECC---------CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCccccee
Confidence            3579999999999999999999876         68899999998654433   34688999999999999999999999


Q ss_pred             EeCC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          205 IEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       205 ~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ...+    ..|||||||+||+|.+++... ..+++..++.|+.||+.||+|||+++   ||||||||+||||+       
T Consensus        77 ~~~~~~~~~~~lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~-------  145 (277)
T d1o6ya_          77 EAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS-------  145 (277)
T ss_dssp             EEECSSSEEEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEE-------
T ss_pred             eeccCCCceEEEEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccC-------
Confidence            8654    378999999999999988654 47999999999999999999999998   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCc-ceeeeeccccccccCCcccccCCCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDK-THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~-~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~el  359 (511)
                                        .+..++|+|||++........ .......+||+.|||||++.+..|+.++|||||||+||||
T Consensus       146 ------------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyel  207 (277)
T d1o6ya_         146 ------------------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV  207 (277)
T ss_dssp             ------------------TTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHH
Confidence                              477899999999976543322 1223446899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhcC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-LMSEVVEALKP  438 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-s~~eil~~L~~  438 (511)
                      +||+.||.+.....      ..............        ......++.+.+||.+||+.||.+|| |++++++.|.+
T Consensus       208 ltG~~Pf~~~~~~~------~~~~~~~~~~~~~~--------~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         208 LTGEPPFTGDSPVS------VAYQHVREDPIPPS--------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             HHSSCSCCCSSHHH------HHHHHHHCCCCCGG--------GTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HhCCCCCCCcCHHH------HHHHHHhcCCCCCc--------hhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            99999997543211      11111111111111        11112357889999999999999999 89999988865


Q ss_pred             C
Q 010432          439 L  439 (511)
Q Consensus       439 l  439 (511)
                      +
T Consensus       274 ~  274 (277)
T d1o6ya_         274 V  274 (277)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.2e-53  Score=424.49  Aligned_cols=250  Identities=26%  Similarity=0.359  Sum_probs=202.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHH---HHHHHHhCCCCCCcceEee
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWL---AEVNFLGDLVHLNLVKLIG  202 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~---~E~~il~~l~H~nIv~l~~  202 (511)
                      ++|+++++||+|+||.||+|++..         +|+.||||++.....   .....+.   +|+.+++.++|||||++++
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~---------t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~   74 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKAD---------TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY   74 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECC---------CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence            579999999999999999999876         688999999964321   1122333   4577888889999999999


Q ss_pred             EEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCC
Q 010432          203 YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK  282 (511)
Q Consensus       203 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~  282 (511)
                      ++.+++.+|||||||++|+|.++|... ..+++..++.|+.||+.||+|||+++   ||||||||+||||+         
T Consensus        75 ~~~~~~~~~ivmE~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~---------  141 (364)
T d1omwa3          75 AFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLD---------  141 (364)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC---------
T ss_pred             EEEECCEEEEEEEecCCCcHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEc---------
Confidence            999999999999999999999999654 46899999999999999999999999   99999999999998         


Q ss_pred             cceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHh
Q 010432          283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ellt  361 (511)
                                      .++.+||+|||+|+......    ....+||+.|||||++.. ..|+.++|||||||+||||+|
T Consensus       142 ----------------~~g~iKl~DFGla~~~~~~~----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemlt  201 (364)
T d1omwa3         142 ----------------EHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR  201 (364)
T ss_dssp             ----------------SSSCEEECCCTTCEECSSSC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ----------------CCCcEEEeeeceeeecCCCc----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHh
Confidence                            47889999999998765432    234679999999999874 578999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      |+.||..........+....   ...            ...++...++++.+||.+||+.||.+|||     +.+|+++
T Consensus       202 G~~Pf~~~~~~~~~~~~~~~---~~~------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         202 GHSPFRQHKTKDKHEIDRMT---LTM------------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             SSCSSCSSCSSCHHHHHHHS---SSC------------CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             CCCCCCCCCHHHHHHHHHhc---ccC------------CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            99999865443322221111   000            01112223577899999999999999999     6888764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-54  Score=415.39  Aligned_cols=259  Identities=27%  Similarity=0.404  Sum_probs=199.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc---ccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++.+.||+|+||+||+|++.....      ....||||+++....   ...++|.+|+.+|++++|||||+++|++.
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~------~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~   81 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSG------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL   81 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTS------CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCC------cEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            579999999999999999998764221      345799999976532   22357899999999999999999999996


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      + +..++|||||++|+|.+++..+...+++..++.++.||+.||.|||+++   |+||||||+||||+.           
T Consensus        82 ~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~-----------  146 (273)
T d1u46a_          82 T-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLAT-----------  146 (273)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEE-----------
T ss_pred             e-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhcccc-----------
Confidence            5 4678999999999999988776667999999999999999999999998   999999999999984           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcce-eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  363 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~  363 (511)
                                    +..+||+|||+++......... ......||..|+|||++.+..++.++|||||||++|||+| |+
T Consensus       147 --------------~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~  212 (273)
T d1u46a_         147 --------------RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  212 (273)
T ss_dssp             --------------TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             --------------ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCC
Confidence                          7789999999999875543332 2334568899999999999999999999999999999998 89


Q ss_pred             CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcC
Q 010432          364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  438 (511)
Q Consensus       364 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~  438 (511)
                      .||.+....   .....+.   ..          ......+...+..+.+||.+||+.||++||||.+|++.|++
T Consensus       213 ~Pf~~~~~~---~~~~~i~---~~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         213 EPWIGLNGS---QILHKID---KE----------GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CTTTTCCHH---HHHHHHH---TS----------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCcCHH---HHHHHHH---hC----------CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            999754322   1111111   11          11111222335789999999999999999999999998864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-54  Score=421.32  Aligned_cols=269  Identities=27%  Similarity=0.362  Sum_probs=203.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceE
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKL  200 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l  200 (511)
                      .+++..++|++.++||+|+||.||+|++...+.    ..+++.||||+++..... ..+.+.+|..++.++ +|+|||.+
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~----~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDK----TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTS----SSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCc----ccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            334445789999999999999999999865322    235779999999765432 345678888888777 68999999


Q ss_pred             eeEEEeC-CeEEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecc
Q 010432          201 IGYCIED-DQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD  264 (511)
Q Consensus       201 ~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrD  264 (511)
                      ++++... ..+++|||||++|+|.++|...               ...+++..++.++.||+.||+|||+++   |||||
T Consensus        83 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrD  159 (299)
T d1ywna1          83 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  159 (299)
T ss_dssp             EEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             eeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCc
Confidence            9988764 4689999999999999999643               234889999999999999999999998   99999


Q ss_pred             cCCCcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCC
Q 010432          265 FKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT  344 (511)
Q Consensus       265 LKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~  344 (511)
                      |||+||||+                         +++.+||+|||+|+...............||+.|||||++.+..|+
T Consensus       160 lKp~NILl~-------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~  214 (299)
T d1ywna1         160 LAARNILLS-------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  214 (299)
T ss_dssp             CCGGGEEEC-------------------------GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCC
T ss_pred             CCccceeEC-------------------------CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCC
Confidence            999999998                         4778999999999876554443334456899999999999999999


Q ss_pred             ccccchhHHHHHHHHHhCC-CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCC
Q 010432          345 SRSDVYSFGVVLLEMLTGR-RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  423 (511)
Q Consensus       345 ~~~DIwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP  423 (511)
                      .++|||||||++|||++|. .||.......  .+......    .          .....+...++++.+||.+||+.||
T Consensus       215 ~~sDiwS~Gvil~ellt~~~~p~~~~~~~~--~~~~~~~~----~----------~~~~~~~~~~~~l~~li~~cl~~dP  278 (299)
T d1ywna1         215 IQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE----G----------TRMRAPDYTTPEMYQTMLDCWHGEP  278 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HHHHHHHH----T----------CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             cccceeehHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhc----C----------CCCCCCccCCHHHHHHHHHHcCCCh
Confidence            9999999999999999975 5676443221  11111111    0          0111222335788999999999999


Q ss_pred             CCCCCHHHHHHHhcCC
Q 010432          424 KARPLMSEVVEALKPL  439 (511)
Q Consensus       424 ~~RPs~~eil~~L~~l  439 (511)
                      .+|||+.+|+++|+.+
T Consensus       279 ~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         279 SQRPTFSELVEHLGNL  294 (299)
T ss_dssp             GGSCCHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHH
Confidence            9999999999999754

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.3e-53  Score=422.65  Aligned_cols=246  Identities=25%  Similarity=0.308  Sum_probs=206.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      ++|++++.||+|+||+||+|+++.         +|+.||||++....   ....+.+++|+.+|+.++|||||++++++.
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~---------~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~  111 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKE---------SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK  111 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT---------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECC---------CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc
Confidence            579999999999999999999876         68899999996432   233467899999999999999999999999


Q ss_pred             eCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          206 EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       206 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .....++||||+.+|+|..++... ..+++..++.|+.||+.||.|||+++   ||||||||+||||+            
T Consensus       112 ~~~~~~~v~e~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~------------  175 (350)
T d1rdqe_         112 DNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLID------------  175 (350)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC------------
T ss_pred             cccccccccccccccchhhhHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccC------------
Confidence            999999999999999999998654 37999999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   .++.+||+|||+|+.....     .....||+.|||||++.+..|+.++|||||||+||||+||+.|
T Consensus       176 -------------~~g~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~P  237 (350)
T d1rdqe_         176 -------------QQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP  237 (350)
T ss_dssp             -------------TTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCCEEeeeceeeeecccc-----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCC
Confidence                         4778999999999976542     2346799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  435 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RP-----s~~eil~~  435 (511)
                      |.+....   .+...+   ....        .    .++...++++.+||.+||+.||.+|+     |+.+|++|
T Consensus       238 f~~~~~~---~~~~~i---~~~~--------~----~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         238 FFADQPI---QIYEKI---VSGK--------V----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             SCCSSHH---HHHHHH---HHCC--------C----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCcCHH---HHHHHH---hcCC--------C----CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence            9754321   111111   1100        0    11122357889999999999999994     88998864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1e-52  Score=408.13  Aligned_cols=253  Identities=25%  Similarity=0.345  Sum_probs=206.9

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc---------HHHHHHHHHHHhCCC-CCCc
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---------HKEWLAEVNFLGDLV-HLNL  197 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~---------~~~~~~E~~il~~l~-H~nI  197 (511)
                      .++|++++.||+|+||+||+|++..         +|+.||||+++......         .+.+.+|+.+|++|+ ||||
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~---------~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI   72 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKP---------TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI   72 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTB
T ss_pred             cccCEEceEEecCcCeEEEEEEECC---------CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCe
Confidence            3689999999999999999999876         68899999997654221         235789999999997 9999


Q ss_pred             ceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          198 VKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       198 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      |++++++.+++.+|||||||++|+|.++|..+ ..+++..++.++.||+.||+|||+++   ||||||||+|||++    
T Consensus        73 v~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~----  144 (277)
T d1phka_          73 IQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLD----  144 (277)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----
T ss_pred             EEEEeecccCcceEEEEEcCCCchHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEc----
Confidence            99999999999999999999999999999654 47999999999999999999999998   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc------CCCCccccchh
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT------GHLTSRSDVYS  351 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~------~~~~~~~DIwS  351 (511)
                                           .++.+||+|||+++.......   ....+||+.|+|||++.+      ..++.++||||
T Consensus       145 ---------------------~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Diws  200 (277)
T d1phka_         145 ---------------------DDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS  200 (277)
T ss_dssp             ---------------------TTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred             ---------------------CCCCeEEccchheeEccCCCc---eeeeeccCCCCCHHHhhccccccCCCCCchheEcc
Confidence                                 478899999999998655332   344689999999999863      35788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       352 lGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      +||+||||++|+.||.+.....   ....+   ......        +........++++.+|+.+||+.||.+|||+.|
T Consensus       201 lGvilyeml~g~~Pf~~~~~~~---~~~~i---~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~e  266 (277)
T d1phka_         201 TGVIMYTLLAGSPPFWHRKQML---MLRMI---MSGNYQ--------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE  266 (277)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHH---HHHHH---HHTCCC--------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             cchhhhhhccCCCCCCCCCHHH---HHHHH---HhCCCC--------CCCcccccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            9999999999999998653211   11111   111000        111111234578999999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      |+++
T Consensus       267 il~h  270 (277)
T d1phka_         267 ALAH  270 (277)
T ss_dssp             HTTS
T ss_pred             HHcC
Confidence            9875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-53  Score=409.94  Aligned_cols=249  Identities=27%  Similarity=0.433  Sum_probs=197.5

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEe-
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-  206 (511)
                      .++|+++++||+|+||.||+|+++           |..||||+++...  ..+.|.+|+++|++++|||||+++|+|.+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-----------~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~   72 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-----------GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE   72 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-----------TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-----------CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEec
Confidence            356888899999999999999873           5689999997653  34679999999999999999999999865 


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      .+.++||||||++|+|.++|..+ ...+++..++.|+.||+.||.|||+++   ||||||||+|||++            
T Consensus        73 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~------------  137 (262)
T d1byga_          73 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS------------  137 (262)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC------------
T ss_pred             CCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheec------------
Confidence            45689999999999999999653 235899999999999999999999988   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt-g~~  364 (511)
                                   .++.+||+|||+++.....     .....+|+.|+|||++.+..++.++|||||||++|||+| |+.
T Consensus       138 -------------~~~~~kl~dfg~s~~~~~~-----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~  199 (262)
T d1byga_         138 -------------EDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  199 (262)
T ss_dssp             -------------TTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCCCEeecccccceecCCC-----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCC
Confidence                         4788999999999875442     223568999999999999999999999999999999998 677


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      ||......   .+...+..              .....++...++.+.+||.+||+.||.+||||.+|+++|+.+
T Consensus       200 p~~~~~~~---~~~~~i~~--------------~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         200 PYPRIPLK---DVVPRVEK--------------GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             SCTTSCGG---GHHHHHTT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHH---HHHHHHHc--------------CCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            77654322   22222211              111222333457899999999999999999999999999754

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-53  Score=417.36  Aligned_cols=248  Identities=28%  Similarity=0.426  Sum_probs=204.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC---cccHHHHHHHHHHHh-CCCCCCcceEeeEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG---LQGHKEWLAEVNFLG-DLVHLNLVKLIGYC  204 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~-~l~H~nIv~l~~~~  204 (511)
                      ++|++++.||+|+||+||+|+++.         +++.||||++++..   ....+.+.+|..++. .++|||||++++++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~---------t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~   72 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF   72 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT---------TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECC---------CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEE
Confidence            579999999999999999999876         78899999997532   223456777877765 68999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFG  284 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~  284 (511)
                      .+++..|||||||++|+|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+|||++           
T Consensus        73 ~~~~~~yivmEy~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~-----------  137 (320)
T d1xjda_          73 QTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD-----------  137 (320)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEEC-----------
T ss_pred             ccCCceeEEEeecCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeec-----------
Confidence            9999999999999999999999654 46899999999999999999999998   99999999999998           


Q ss_pred             eeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCC
Q 010432          285 FCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~  364 (511)
                                    +++.+||+|||+++.......  ..+...||+.|+|||++.+..|+.++|||||||++|||++|+.
T Consensus       138 --------------~~~~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~  201 (320)
T d1xjda_         138 --------------KDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS  201 (320)
T ss_dssp             --------------TTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCceeccccchhhhcccccc--cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCC
Confidence                          478899999999987654332  2344689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVE  434 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~-eil~  434 (511)
                      ||.+....   .+...+.   ..        .+.    ++...++.+.+||.+||+.||.+||++. +|++
T Consensus       202 PF~~~~~~---~~~~~i~---~~--------~~~----~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         202 PFHGQDEE---ELFHSIR---MD--------NPF----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             SSCCSSHH---HHHHHHH---HC--------CCC----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCCCCCHH---HHHHHHH---cC--------CCC----CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            99764322   1111111   00        111    1222357789999999999999999985 6765

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-52  Score=411.45  Aligned_cols=265  Identities=25%  Similarity=0.362  Sum_probs=200.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|++..         +|+.||||+++.....  ....+.+|+++|++++|||||++++++.+
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~   72 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKL---------TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT   72 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECC---------CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc
Confidence            589999999999999999999876         6789999999755322  24678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 DDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l-~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                      ++.+|||||||.+ ++.+++ ......+++..++.++.||+.||+|||+++   ||||||||+|||++            
T Consensus        73 ~~~~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~------------  136 (298)
T d1gz8a_          73 ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLIN------------  136 (298)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC------------
T ss_pred             ccceeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeec------------
Confidence            9999999999965 455554 344567999999999999999999999999   99999999999998            


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC-CCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DIwSlGvil~elltg~~  364 (511)
                                   .+..+||+|||+|+........  .....||+.|+|||++.... ++.++|||||||++|+|++|+.
T Consensus       137 -------------~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~  201 (298)
T d1gz8a_         137 -------------TEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA  201 (298)
T ss_dssp             -------------TTSCEEECSTTHHHHHCCCSBC--TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------ccCcceeccCCcceeccCCccc--ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCC
Confidence                         4778999999999876443322  33457999999999887665 4789999999999999999999


Q ss_pred             CCCCCCCCCchhHHHhhhhhhc-cc---cccccc------cCCccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          365 SMDKNRPNGEHNLVEWARPHLG-ER---RRFYRL------IDPRLEGH---FSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       365 pf~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~------~~~~~~~~---~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      ||.+......  +......... ..   ......      ........   .....+.++.+||.+||+.||.+|||+.|
T Consensus       202 Pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~e  279 (298)
T d1gz8a_         202 LFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA  279 (298)
T ss_dssp             SCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCCHHHH--HHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            9976432111  1111000000 00   000000      00000000   00122467899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      ++++
T Consensus       280 ll~H  283 (298)
T d1gz8a_         280 ALAH  283 (298)
T ss_dssp             HHTS
T ss_pred             HhCC
Confidence            9985

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-53  Score=415.35  Aligned_cols=266  Identities=27%  Similarity=0.387  Sum_probs=208.9

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++++.||+|+||.||+|++...+..  ...++..||||+++.+... ...++.+|+..+.++ +|||||+++++|
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~--~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~   88 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC   88 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC------CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcc--cccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence            346899999999999999999988653221  1124568999999876543 335788999999888 899999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      .+++..++|||||++|+|.++|..+.               ..+++..++.++.||+.||+|||+++   ||||||||+|
T Consensus        89 ~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~N  165 (299)
T d1fgka_          89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARN  165 (299)
T ss_dssp             CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGG
T ss_pred             ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccc
Confidence            99999999999999999999996442               35899999999999999999999999   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         .++.+||+|||+++...............||+.|+|||++.++.|+.++||
T Consensus       166 iLl~-------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Di  220 (299)
T d1fgka_         166 VLVT-------------------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  220 (299)
T ss_dssp             EEEC-------------------------TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHH
T ss_pred             eeec-------------------------CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhh
Confidence            9998                         477899999999997655444433445679999999999999999999999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++ |.+||......   .+...+.    .          ......+...++.+.+||.+||+.||.+|||
T Consensus       221 wS~Gvvl~ell~~g~~p~~~~~~~---~~~~~i~----~----------~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps  283 (299)
T d1fgka_         221 WSFGVLLWEIFTLGGSPYPGVPVE---ELFKLLK----E----------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPT  283 (299)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHH----T----------TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhHHHHHHhccCCCCCCCCCCHH---HHHHHHH----c----------CCCCCCCccchHHHHHHHHHHccCCHhHCcC
Confidence            999999999998 68888654321   1111111    1          1111122233578999999999999999999


Q ss_pred             HHHHHHHhcCC
Q 010432          429 MSEVVEALKPL  439 (511)
Q Consensus       429 ~~eil~~L~~l  439 (511)
                      |.||++.|+++
T Consensus       284 ~~eil~~L~~i  294 (299)
T d1fgka_         284 FKQLVEDLDRI  294 (299)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-52  Score=414.54  Aligned_cols=255  Identities=26%  Similarity=0.417  Sum_probs=203.8

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCc--EEEEEEecCCCc-ccHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL--TVAVKTLNHDGL-QGHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~--~vAvK~~~~~~~-~~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ++|++.++||+|+||+||+|+++.         +|.  .||||+++.... ...+.|.+|+++|.++ +|||||+++++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~   80 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKK---------DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC   80 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEE---------TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECC---------CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEE
Confidence            578889999999999999999876         343  578888865432 2345789999999999 799999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN  269 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~N  269 (511)
                      .+++.++||||||++|+|.++|...               ...+++..++.++.||+.||.|||+++   ||||||||+|
T Consensus        81 ~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~N  157 (309)
T d1fvra_          81 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARN  157 (309)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGG
T ss_pred             ecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccce
Confidence            9999999999999999999998643               356899999999999999999999998   9999999999


Q ss_pred             EEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccc
Q 010432          270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV  349 (511)
Q Consensus       270 ILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DI  349 (511)
                      ||++                         .++.+||+|||+|+.......   .....||..|+|||.+.+..|+.++||
T Consensus       158 IL~~-------------------------~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~sDv  209 (309)
T d1fvra_         158 ILVG-------------------------ENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDV  209 (309)
T ss_dssp             EEEC-------------------------GGGCEEECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHH
T ss_pred             EEEc-------------------------CCCceEEcccccccccccccc---ccceecCCcccchHHhccCCCCcccee
Confidence            9998                         477899999999986543222   223568999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCC-CCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          350 YSFGVVLLEMLTGRR-SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       350 wSlGvil~elltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |||||++|||++|.. ||....   ...+...+..              ......+...++++.+||.+||+.||++|||
T Consensus       210 wSfGvil~ell~~~~~p~~~~~---~~~~~~~i~~--------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs  272 (309)
T d1fvra_         210 WSYGVLLWEIVSLGGTPYCGMT---CAELYEKLPQ--------------GYRLEKPLNCDDEVYDLMRQCWREKPYERPS  272 (309)
T ss_dssp             HHHHHHHHHHHTTSCCTTTTCC---HHHHHHHGGG--------------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ehhHHHHHHHHhcCCCCCCCCC---HHHHHHHHHh--------------cCCCCCCccCCHHHHHHHHHHcCCChhHCcC
Confidence            999999999999765 565432   1122211111              0111222334578999999999999999999


Q ss_pred             HHHHHHHhcCCC
Q 010432          429 MSEVVEALKPLP  440 (511)
Q Consensus       429 ~~eil~~L~~l~  440 (511)
                      |.+|+++|+.+.
T Consensus       273 ~~eil~~L~~i~  284 (309)
T d1fvra_         273 FAQILVSLNRML  284 (309)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-52  Score=410.10  Aligned_cols=263  Identities=23%  Similarity=0.265  Sum_probs=196.2

Q ss_pred             CCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCccc-----HHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          133 PESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-----HKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       133 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~-----~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+++||+|+||+||+|+++.         +|+.||||+++......     .+.+.+|+.+|++++|||||++++++..+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~   72 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKN---------TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK   72 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSS---------CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cceEeccCcCeEEEEEEECC---------CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC
Confidence            35689999999999999865         68899999997553321     23588999999999999999999999999


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..|||||||.++++..++ .....+++..+..++.||+.||+|||+++   ||||||||+|||++              
T Consensus        73 ~~~~ivmE~~~~~~~~~~~-~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~--------------  134 (299)
T d1ua2a_          73 SNISLVFDFMETDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLD--------------  134 (299)
T ss_dssp             TCCEEEEECCSEEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC--------------
T ss_pred             CceeehhhhhcchHHhhhh-hcccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEec--------------
Confidence            9999999999877665544 55567999999999999999999999999   99999999999998              


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  366 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~pf  366 (511)
                                 .++.+||+|||+|+........  ....+||+.|||||++.. ..|+.++|||||||++|||++|..||
T Consensus       135 -----------~~~~~KL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf  201 (299)
T d1ua2a_         135 -----------ENGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  201 (299)
T ss_dssp             -----------TTCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             -----------CCCccccccCccccccCCCccc--ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCC
Confidence                       4788999999999876554322  234679999999999875 46899999999999999999999999


Q ss_pred             CCCCCCCchhHHHhhhhh-----hccccccccccCCccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          367 DKNRPNGEHNLVEWARPH-----LGERRRFYRLIDPRLEGHFS-----IKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+.........+......     +...........-......+     ...++++.+||.+||+.||++|||+.|++++
T Consensus       202 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         202 PGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            765432211111100000     00000000000000000001     1225679999999999999999999999874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-52  Score=412.12  Aligned_cols=265  Identities=26%  Similarity=0.377  Sum_probs=214.0

Q ss_pred             HhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-cHHHHHHHHHHHhCC-CCCCcceEeeEE
Q 010432          127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNFLGDL-VHLNLVKLIGYC  204 (511)
Q Consensus       127 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l-~H~nIv~l~~~~  204 (511)
                      ..++|++.++||+|+||.||+|++....    +..+++.||||+++..... ....|.+|+.+++++ +|||||++++++
T Consensus        21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~----~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          21 PRNRLSFGKTLGAGAFGKVVEATAYGLI----KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHHHeEEeeEEeecCCeEEEEEEEeccc----cCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            4468889999999999999999885321    1236789999999865433 334688999999999 799999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhCC-----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCC
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRRS-----------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT  267 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp  267 (511)
                      .+.+..+||||||++|+|.+++....                 ..+++..++.|+.||+.||+|||+++   ||||||||
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp  173 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAA  173 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccccc
Confidence            99999999999999999999986532                 25889999999999999999999999   99999999


Q ss_pred             CcEEeccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccc
Q 010432          268 SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS  347 (511)
Q Consensus       268 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~  347 (511)
                      +|||++                         .++.+||+|||+++...........+..+||+.|+|||++.+..++.++
T Consensus       174 ~NIl~~-------------------------~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  228 (311)
T d1t46a_         174 RNILLT-------------------------HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES  228 (311)
T ss_dssp             GGEEEE-------------------------TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHH
T ss_pred             cccccc-------------------------ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcc
Confidence            999998                         4778999999999987765555555567899999999999999999999


Q ss_pred             cchhHHHHHHHHHhCC-CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010432          348 DVYSFGVVLLEMLTGR-RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       348 DIwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      |||||||++|||+|+. +||.......  .+......              ......+...+..+.+||.+||+.||.+|
T Consensus       229 DIwS~G~~l~ellt~g~p~~~~~~~~~--~~~~~i~~--------------~~~~~~~~~~~~~l~~Li~~cl~~dP~~R  292 (311)
T d1t46a_         229 DVWSYGIFLWELFSLGSSPYPGMPVDS--KFYKMIKE--------------GFRMLSPEHAPAEMYDIMKTCWDADPLKR  292 (311)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCSSH--HHHHHHHH--------------TCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cccchHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhc--------------CCCCCCcccccHHHHHHHHHHcCCChhHC
Confidence            9999999999999954 5454432221  11111111              11111222335789999999999999999


Q ss_pred             CCHHHHHHHhcCC
Q 010432          427 PLMSEVVEALKPL  439 (511)
Q Consensus       427 Ps~~eil~~L~~l  439 (511)
                      |||.+|++.|+++
T Consensus       293 Ps~~~il~~L~~~  305 (311)
T d1t46a_         293 PTFKQIVQLIEKQ  305 (311)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHh
Confidence            9999999999753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-52  Score=409.52  Aligned_cols=257  Identities=26%  Similarity=0.422  Sum_probs=203.7

Q ss_pred             CCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCC-cccHHHHHHHHHHHhCCCCCCcceEeeEEEe-CCeEE
Q 010432          134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRL  211 (511)
Q Consensus       134 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~-~~~~~  211 (511)
                      .++||+|+||+||+|++..++.      +...||||+++... ....++|.+|+++|++++|||||+++|++.. +...+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~  105 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  105 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCC------EEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceE
Confidence            4679999999999999875321      34579999997543 2334679999999999999999999999876 46889


Q ss_pred             EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceeeeccc
Q 010432          212 LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL  291 (511)
Q Consensus       212 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~~~~~  291 (511)
                      +|||||++|+|.+++......+++..++.++.||+.||.|||+.+   |+||||||+||||+                  
T Consensus       106 lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~------------------  164 (311)
T d1r0pa_         106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLD------------------  164 (311)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC------------------
T ss_pred             EEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeEC------------------
Confidence            999999999999999877777889999999999999999999988   99999999999998                  


Q ss_pred             cccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 010432          292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN  369 (511)
Q Consensus       292 ~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg~~pf~~~  369 (511)
                             +++.+||+|||+++.........  ......||+.|+|||++....++.++|||||||+||||+||..||...
T Consensus       165 -------~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~  237 (311)
T d1r0pa_         165 -------EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  237 (311)
T ss_dssp             -------TTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-
T ss_pred             -------CCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCC
Confidence                   47889999999998765432221  222357899999999999999999999999999999999988888653


Q ss_pred             CCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCCC
Q 010432          370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  440 (511)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l~  440 (511)
                      ....  .+.......    .          ....+..+++.+.+||.+||+.||++||+|.||+++|+.+.
T Consensus       238 ~~~~--~~~~~i~~g----~----------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         238 VNTF--DITVYLLQG----R----------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             -------CHHHHHTT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCHH--HHHHHHHcC----C----------CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            3211  111111110    0          11112223578999999999999999999999999998763

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-52  Score=411.93  Aligned_cols=266  Identities=26%  Similarity=0.395  Sum_probs=211.8

Q ss_pred             HHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEE
Q 010432          126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYC  204 (511)
Q Consensus       126 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~  204 (511)
                      +..++|++.+.||+|+||+||+|.++...    +..++..||||+++.... .....|.+|+.+|++++|||||++++++
T Consensus        17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~----~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~   92 (308)
T d1p4oa_          17 VAREKITMSRELGQGSFGMVYEGVAKGVV----KDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   92 (308)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEE----TTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCcc----cCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence            33468899999999999999999885311    111356899999976533 2234689999999999999999999999


Q ss_pred             EeCCeEEEEEEccCCCCHHHHHhhC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccc
Q 010432          205 IEDDQRLLVYEFMPRGSLENHLFRR---------SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV  275 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~L~~~l~~~---------~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~  275 (511)
                      ..++..++|||||++|+|.+++...         ...+++..+..++.||+.||.|||+++   ||||||||+||||+  
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld--  167 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVA--  167 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEEC--
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeec--
Confidence            9999999999999999999988632         234788999999999999999999988   99999999999998  


Q ss_pred             cccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHH
Q 010432          276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  355 (511)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvi  355 (511)
                                             .++.+||+|||+|+...............||+.|+|||.+.+..++.++|||||||+
T Consensus       168 -----------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~i  224 (308)
T d1p4oa_         168 -----------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  224 (308)
T ss_dssp             -----------------------TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             -----------------------CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHH
Confidence                                   478899999999987655444433445679999999999999999999999999999


Q ss_pred             HHHHHhCC-CCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          356 LLEMLTGR-RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       356 l~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      ||||+||. .||.+....   .....+.    ...          ....+..++..+.+||.+||+.||++|||+.+|++
T Consensus       225 l~El~t~~~~p~~~~~~~---~~~~~i~----~~~----------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         225 LWEIATLAEQPYQGLSNE---QVLRFVM----EGG----------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HHHHHHTSCCTTTTSCHH---HHHHHHH----TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCHH---HHHHHHH----hCC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999985 666543211   1111111    000          11112233578999999999999999999999999


Q ss_pred             HhcCCC
Q 010432          435 ALKPLP  440 (511)
Q Consensus       435 ~L~~l~  440 (511)
                      +|+...
T Consensus       288 ~L~~~~  293 (308)
T d1p4oa_         288 SIKEEM  293 (308)
T ss_dssp             HHGGGS
T ss_pred             HHHHhc
Confidence            998653

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-51  Score=405.49  Aligned_cols=269  Identities=23%  Similarity=0.275  Sum_probs=201.6

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCC---CCCCcceEee
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDL---VHLNLVKLIG  202 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l---~H~nIv~l~~  202 (511)
                      .++|++++.||+|+||+||+|++...        +++.||||+++....  .....+.+|+.+|+.|   +|||||++++
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~--------~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~   77 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKN--------GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD   77 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTT--------TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECC--------CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeee
Confidence            46899999999999999999998541        366899999965322  1223466788877665   8999999999


Q ss_pred             EEEe-----CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccc
Q 010432          203 YCIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       203 ~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~  277 (511)
                      +|..     ....+++||||.++++..........+++..++.++.||+.||+|||+++   ||||||||+|||++    
T Consensus        78 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~----  150 (305)
T d1blxa_          78 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVT----  150 (305)
T ss_dssp             EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC----
T ss_pred             eecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEc----
Confidence            9864     34678999999887776665556667999999999999999999999999   99999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHH
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  357 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~  357 (511)
                                           .++.+||+|||+++......   ......||+.|||||++.+..|+.++|||||||++|
T Consensus       151 ---------------------~~~~~kl~dfg~~~~~~~~~---~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~  206 (305)
T d1blxa_         151 ---------------------SSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA  206 (305)
T ss_dssp             ---------------------TTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred             ---------------------CCCCeeecchhhhhhhcccc---cCCCcccChhhcCcchhcCCCCChhehhhchHHHHH
Confidence                                 47789999999998654332   234568999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhHHHhhhhh-----hccccc----cccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          358 EMLTGRRSMDKNRPNGEHNLVEWARPH-----LGERRR----FYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       358 elltg~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      ||++|+.||.+.........+......     +.....    ............+....++.+.+||.+||++||.+|||
T Consensus       207 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~s  286 (305)
T d1blxa_         207 EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS  286 (305)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcC
Confidence            999999999765432211111110000     000000    00000000011122233577899999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.|++++
T Consensus       287 a~e~L~H  293 (305)
T d1blxa_         287 AYSALSH  293 (305)
T ss_dssp             HHHHHTS
T ss_pred             HHHHhcC
Confidence            9999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-52  Score=402.04  Aligned_cols=242  Identities=24%  Similarity=0.379  Sum_probs=198.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc------cHHHHHHHHHHHhCCC--CCCcceE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ------GHKEWLAEVNFLGDLV--HLNLVKL  200 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~il~~l~--H~nIv~l  200 (511)
                      ++|++.++||+|+||+||+|++..         +|+.||||+++.....      ...++.+|+.+|++++  |||||++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~   74 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVS---------DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL   74 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECC---------CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEE
Confidence            579999999999999999999876         6789999999754321      1133678999999986  8999999


Q ss_pred             eeEEEeCCeEEEEEEccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          201 IGYCIEDDQRLLVYEFMPR-GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       201 ~~~~~~~~~~~lv~E~~~~-g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ++++.+++..++||||+.+ ++|.+++... ..+++..++.++.||+.||+|||+++   ||||||||+|||++.     
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~-----  145 (273)
T d1xwsa_          75 LDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDL-----  145 (273)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEET-----
T ss_pred             EEEEeeCCeEEEEEEeccCcchHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEec-----
Confidence            9999999999999999976 5777777544 47999999999999999999999998   999999999999984     


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCC-CccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DIwSlGvil~e  358 (511)
                                         +++.+||+|||+|+......    .+...||+.|||||++.+..+ +.++|||||||+|||
T Consensus       146 -------------------~~~~vkl~DFG~a~~~~~~~----~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilye  202 (273)
T d1xwsa_         146 -------------------NRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  202 (273)
T ss_dssp             -------------------TTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCeEEECccccceeccccc----ccccccCCCcCCHHHHcCCCCCCcccccccceeeehh
Confidence                               35689999999998754432    344689999999999987765 677999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      |++|+.||....     ..   ..    ..        ..+...    .++++.+||.+||+.||.+|||+.|++++
T Consensus       203 ll~g~~Pf~~~~-----~i---~~----~~--------~~~~~~----~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         203 MVCGDIPFEHDE-----EI---IR----GQ--------VFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             HHHSSCSCCSHH-----HH---HH----CC--------CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HhhCCCCCCCch-----HH---hh----cc--------cCCCCC----CCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            999999996421     10   00    00        011112    24778999999999999999999999874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-51  Score=402.12  Aligned_cols=265  Identities=27%  Similarity=0.365  Sum_probs=197.5

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHH--HHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN--FLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~--il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|.+.+.||+|+||.||+|++           +|+.||||+++...   ...+.+|.+  .+.+++|||||++++++..
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-----------~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~   68 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-----------RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNK   68 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-----------TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-----------CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEe
Confidence            5677888999999999999986           46799999996542   234444544  5567899999999999987


Q ss_pred             CC----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecccCCCcEEeccccc
Q 010432          207 DD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA-----ERPVIYRDFKTSNILLDAVRA  277 (511)
Q Consensus       207 ~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~-----~~~iiHrDLKp~NILl~~~~~  277 (511)
                      .+    .+|||||||++|+|.++|.+.  .+++..++.++.|++.||+|||+..     .++||||||||+||||+    
T Consensus        69 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~----  142 (303)
T d1vjya_          69 DNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK----  142 (303)
T ss_dssp             ECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC----
T ss_pred             CCCcceEEEEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc----
Confidence            54    579999999999999999764  6899999999999999999999741     23499999999999998    


Q ss_pred             cccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcce--eeeeccccccccCCcccccC------CCCccccc
Q 010432          278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG------HLTSRSDV  349 (511)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~--~~~~~~Gt~~y~aPE~~~~~------~~~~~~DI  349 (511)
                                           +++.+||+|||+++.........  ......||+.|||||++.+.      .++.++||
T Consensus       143 ---------------------~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di  201 (303)
T d1vjya_         143 ---------------------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI  201 (303)
T ss_dssp             ---------------------TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHH
T ss_pred             ---------------------CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhh
Confidence                                 47899999999998765433221  23346899999999998754      36789999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCCCCCchh--------HHHhhhhhhccccccccccCCccCCCC-CHHHHHHHHHHHHHhcc
Q 010432          350 YSFGVVLLEMLTGRRSMDKNRPNGEHN--------LVEWARPHLGERRRFYRLIDPRLEGHF-SIKGAQKAAQLAAHCLS  420 (511)
Q Consensus       350 wSlGvil~elltg~~pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Li~~cl~  420 (511)
                      |||||+||||+||..||..........        .........     .....++.+.... ..+....+.+|+.+||+
T Consensus       202 ~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~  276 (303)
T d1vjya_         202 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV-----CEQKLRPNIPNRWQSCEALRVMAKIMRECWY  276 (303)
T ss_dssp             HHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH-----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCC
T ss_pred             hhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHH-----hccccCCCCCcccCChHHHHHHHHHHHHHcc
Confidence            999999999999998875433221100        000000000     0111122221111 23456779999999999


Q ss_pred             cCCCCCCCHHHHHHHhcCC
Q 010432          421 RDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       421 ~dP~~RPs~~eil~~L~~l  439 (511)
                      .||.+|||+.||++.|+.+
T Consensus       277 ~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         277 ANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             SSGGGSCCHHHHHHHHHHH
T ss_pred             cCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999765

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.6e-50  Score=395.54  Aligned_cols=266  Identities=22%  Similarity=0.280  Sum_probs=199.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|+++++||+|+||+||+|+++          +|+.||||+++.....  ..+.+.+|+.+|++++|||||++++++..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~----------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~   71 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN----------YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT   71 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET----------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeC----------CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc
Confidence            58999999999999999999875          4679999999765432  24678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      ++..+++|||+.++.+..+. .....+++..+..|+.||+.||+|||+++   ||||||||+||||+             
T Consensus        72 ~~~~~i~~e~~~~~~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~-------------  134 (286)
T d1ob3a_          72 KKRLVLVFEHLDQDLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLIN-------------  134 (286)
T ss_dssp             SSCEEEEEECCSEEHHHHHH-TSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-------------
T ss_pred             CCceeEEEEeehhhhHHHHH-hhcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEc-------------
Confidence            99999999999766555544 55568999999999999999999999998   99999999999998             


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~elltg~~p  365 (511)
                                  .++.+||+|||+|.........  .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus       135 ------------~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~p  200 (286)
T d1ob3a_         135 ------------REGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL  200 (286)
T ss_dssp             ------------TTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCCEEecccccceecccCccc--cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCC
Confidence                        4788999999999875443221  233568999999999875 4569999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhh-----hccccccc------cccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010432          366 MDKNRPNGEHNLVEWARPH-----LGERRRFY------RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  434 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~  434 (511)
                      |.+.........+......     +.......      ....+.....+....++.+.+||.+||+.||++|||+.|+++
T Consensus       201 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         201 FPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9764322111110000000     00000000      000000011112223578899999999999999999999986


Q ss_pred             H
Q 010432          435 A  435 (511)
Q Consensus       435 ~  435 (511)
                      +
T Consensus       281 H  281 (286)
T d1ob3a_         281 H  281 (286)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-49  Score=390.51  Aligned_cols=263  Identities=20%  Similarity=0.199  Sum_probs=203.2

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcc-eEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLV-KLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv-~l~~~~~~~  207 (511)
                      ++|++.+.||+|+||+||+|++..         +|+.||||++......  .++.+|+++++.++|+|+| .+.+++...
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~---------~~~~vAvK~~~~~~~~--~~~~~E~~i~~~l~~~~~i~~~~~~~~~~   75 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIA---------AGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEG   75 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT---------TTEEEEEEEEESCTTS--CCHHHHHHHHHHSTTSTTCCCEEEEEEET
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECC---------CCCEEEEEEEchhccC--HHHHHHHHHHHHccCCCcccEEEEEEecC
Confidence            479999999999999999999875         6789999998765432  3578999999999877655 555666778


Q ss_pred             CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcceee
Q 010432          208 DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI  287 (511)
Q Consensus       208 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~~  287 (511)
                      +..++||||| +|+|.+.+......+++..++.++.||+.||+|||+++   ||||||||+|||++..+           
T Consensus        76 ~~~~ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~-----------  140 (299)
T d1ckia_          76 DYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGK-----------  140 (299)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGG-----------
T ss_pred             CEEEEEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccC-----------
Confidence            8999999999 67888877777778999999999999999999999999   99999999999987422           


Q ss_pred             eccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHhC
Q 010432          288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  362 (511)
Q Consensus       288 ~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~elltg  362 (511)
                                 .+..+||+|||+|+........     .......||+.|||||++.+..++.++|||||||++|||++|
T Consensus       141 -----------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg  209 (299)
T d1ckia_         141 -----------KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG  209 (299)
T ss_dssp             -----------GTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHS
T ss_pred             -----------CCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhC
Confidence                       3567999999999976543221     123346899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHhhh-hhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          363 RRSMDKNRPNGEHNLVEWAR-PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       363 ~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      +.||................ .....       ..+.+..    .+++++.+||.+||+.||.+||++.+|.+.|+.+
T Consensus       210 ~~P~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~----~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         210 SLPWQGLKAATKRQKYERISEKKMST-------PIEVLCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             SCTTCCCC-------HHHHHHHHHHS-------CHHHHTT----TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             CCcccccchHHHHHHHHHhhcccCCC-------ChhHhcc----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            99998654433222111110 00000       0000111    1246789999999999999999999988877644

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-50  Score=402.51  Aligned_cols=263  Identities=24%  Similarity=0.307  Sum_probs=195.7

Q ss_pred             CCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCcceEeeEEEeC--
Q 010432          130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIED--  207 (511)
Q Consensus       130 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~--  207 (511)
                      +|+.+++||+|+||+||+|++..         +|+.||||++......    +.+|+.+|++|+|+|||+++++|...  
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~---------~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~   87 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGE   87 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--
T ss_pred             CcEeeeEEeeCcCeEEEEEEECC---------CCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCc
Confidence            57788899999999999999876         6889999999765422    34799999999999999999998643  


Q ss_pred             ----CeEEEEEEccCCCCHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccC
Q 010432          208 ----DQRLLVYEFMPRGSLENHLF--RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG  281 (511)
Q Consensus       208 ----~~~~lv~E~~~~g~L~~~l~--~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~  281 (511)
                          .+++||||||+++.+..+..  .....+++..++.|+.||+.||+|||+++   ||||||||+||||+.       
T Consensus        88 ~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~-------  157 (350)
T d1q5ka_          88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDP-------  157 (350)
T ss_dssp             CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECT-------
T ss_pred             cCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEec-------
Confidence                35789999997654333322  34567999999999999999999999998   999999999999984       


Q ss_pred             CcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCccccc-CCCCccccchhHHHHHHHHH
Q 010432          282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DIwSlGvil~ell  360 (511)
                                       +...+||+|||+++.......   ....+||+.|+|||.+.+ ..|+.++|||||||++|||+
T Consensus       158 -----------------~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~  217 (350)
T d1q5ka_         158 -----------------DTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL  217 (350)
T ss_dssp             -----------------TTCCEEECCCTTCEECCTTSC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCceeEecccchhhccCCcc---cccccccccccChHHhhcccCCCcceeecccceEEEehh
Confidence                             235799999999987654332   234679999999998875 57899999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHhhh---------hhhcc--ccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010432          361 TGRRSMDKNRPNGEHNLVEWAR---------PHLGE--RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  429 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~  429 (511)
                      +|+.||...........+....         .....  ...+.......+........++++.+||.+||+.||.+|||+
T Consensus       218 ~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta  297 (350)
T d1q5ka_         218 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP  297 (350)
T ss_dssp             HTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCH
Confidence            9999997654321111110000         00000  000000000001111122345778999999999999999999


Q ss_pred             HHHHHH
Q 010432          430 SEVVEA  435 (511)
Q Consensus       430 ~eil~~  435 (511)
                      .|++++
T Consensus       298 ~e~L~H  303 (350)
T d1q5ka_         298 LEACAH  303 (350)
T ss_dssp             HHHHTS
T ss_pred             HHHhcC
Confidence            999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-49  Score=389.16  Aligned_cols=269  Identities=23%  Similarity=0.304  Sum_probs=196.9

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc--ccHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|++..         +|+.||||++.....  ....++.+|+.+|++++||||+++++++..
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~   80 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRK---------TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT   80 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCEEEEEEEecCcCeEEEEEEECC---------CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeec
Confidence            689999999999999999999875         688999999865432  234678999999999999999999998865


Q ss_pred             --------CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccc
Q 010432          207 --------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE  278 (511)
Q Consensus       207 --------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~  278 (511)
                              .+..|+|||||.++.+. .+......+++..++.++.||+.||.|||+++   ||||||||+|||++     
T Consensus        81 ~~~~~~~~~~~~~iv~e~~~~~~~~-~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~-----  151 (318)
T d3blha1          81 KASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLIT-----  151 (318)
T ss_dssp             ----------CEEEEEECCCEEHHH-HHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC-----
T ss_pred             ccccccccCceEEEEEeccCCCccc-hhhhcccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeec-----
Confidence                    34689999999776554 44455567899999999999999999999998   99999999999998     


Q ss_pred             ccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcc--eeeeeccccccccCCcccccC-CCCccccchhHHHH
Q 010432          279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVV  355 (511)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvi  355 (511)
                                          .++.+||+|||+++........  ......+||+.|+|||++.+. .|+.++|||||||+
T Consensus       152 --------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvi  211 (318)
T d3blha1         152 --------------------RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  211 (318)
T ss_dssp             --------------------TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             --------------------CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCce
Confidence                                4788999999999865532221  122335799999999998765 68999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHhhhhhhccc-------cccccccCCccCCCCCH-------HHHHHHHHHHHHhccc
Q 010432          356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER-------RRFYRLIDPRLEGHFSI-------KGAQKAAQLAAHCLSR  421 (511)
Q Consensus       356 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-------~~~~~~~~Li~~cl~~  421 (511)
                      +|||++|+.||.+.........+..........       .................       ..++.+.+||.+||+.
T Consensus       212 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~  291 (318)
T d3blha1         212 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL  291 (318)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCS
T ss_pred             eeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcC
Confidence            999999999997644322211111111110000       00000000000000010       1145678999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 010432          422 DPKARPLMSEVVEA  435 (511)
Q Consensus       422 dP~~RPs~~eil~~  435 (511)
                      ||++|||+.|++++
T Consensus       292 dP~~R~sa~elL~H  305 (318)
T d3blha1         292 DPAQRIDSDDALNH  305 (318)
T ss_dssp             STTTSCCHHHHHHS
T ss_pred             ChhHCcCHHHHHcC
Confidence            99999999999985

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-49  Score=395.20  Aligned_cols=262  Identities=23%  Similarity=0.301  Sum_probs=196.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|+++++||+|+||+||+|+++.         +|+.||||+++.....  ..+.+.+|+.+|++++|||||+++++|.
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~   87 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGR---------TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFT   87 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETT---------TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEec
Confidence            4689999999999999999999876         6889999999865432  2356889999999999999999999997


Q ss_pred             eCC------eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccc
Q 010432          206 EDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN  279 (511)
Q Consensus       206 ~~~------~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~  279 (511)
                      ..+      .+||||||| +++|..++..  ..+++..++.++.||+.||+|||+++   ||||||||+|||++      
T Consensus        88 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~------  155 (346)
T d1cm8a_          88 PDETLDDFTDFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVN------  155 (346)
T ss_dssp             SCSSTTTCCCCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC------
T ss_pred             cCccccccceEEEEEecc-cccHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcc------
Confidence            654      579999999 6688877654  36999999999999999999999999   99999999999998      


Q ss_pred             cCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHH
Q 010432          280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLE  358 (511)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~e  358 (511)
                                         .++.+||+|||+|+.....     .+...||+.|+|||++.+. .++.++|||||||++||
T Consensus       156 -------------------~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  211 (346)
T d1cm8a_         156 -------------------EDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  211 (346)
T ss_dssp             -------------------TTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             -------------------cccccccccccceeccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHH
Confidence                               4788999999999876543     2346799999999998764 56899999999999999


Q ss_pred             HHhCCCCCCCCCCCCchhHHHhhhhhhcc--------------ccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          359 MLTGRRSMDKNRPNGEHNLVEWARPHLGE--------------RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       359 lltg~~pf~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      |++|+.||.+...................              ...+.......+. ......++.+.+||.+||+.||.
T Consensus       212 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~  290 (346)
T d1cm8a_         212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAE  290 (346)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTT
T ss_pred             HHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChh
Confidence            99999999765322111111100000000              0000000000000 11122356789999999999999


Q ss_pred             CCCCHHHHHHH
Q 010432          425 ARPLMSEVVEA  435 (511)
Q Consensus       425 ~RPs~~eil~~  435 (511)
                      +|||+.|||++
T Consensus       291 ~R~ta~eiL~H  301 (346)
T d1cm8a_         291 QRVTAGEALAH  301 (346)
T ss_dssp             TSCCHHHHHHS
T ss_pred             HCcCHHHHhcC
Confidence            99999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-49  Score=394.77  Aligned_cols=268  Identities=21%  Similarity=0.283  Sum_probs=196.3

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc-ccHHHHHHHHHHHhCCCCCCcceEeeEEEeC
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIED  207 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~il~~l~H~nIv~l~~~~~~~  207 (511)
                      .+|++++.||+|+||+||+|++..         +|+.||||++..... ...+.+++|+.+|++|+|||||++++++...
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~   78 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNV---------NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP   78 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETT---------TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCS
T ss_pred             CCeEEEEEEeeccCeEEEEEEECC---------CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeec
Confidence            579999999999999999999865         688999999976443 2345788999999999999999999998764


Q ss_pred             C----eEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          208 D----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       208 ~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      .    ..+++|+|+.+|+|.+++...  .+++..++.++.||+.||+|||+++   ||||||||+||||+          
T Consensus        79 ~~~~~~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~----------  143 (345)
T d1pmea_          79 TIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLN----------  143 (345)
T ss_dssp             STTTCCCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC----------
T ss_pred             cccccceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEEC----------
Confidence            3    234445556699999999653  6899999999999999999999999   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcc-eeeeeccccccccCCcccc-cCCCCccccchhHHHHHHHHHh
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~Gt~~y~aPE~~~-~~~~~~~~DIwSlGvil~ellt  361 (511)
                                     +++.+||+|||+|+........ ......+||+.|+|||++. +..++.++||||+||++|||++
T Consensus       144 ---------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~  208 (345)
T d1pmea_         144 ---------------TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS  208 (345)
T ss_dssp             ---------------TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhh
Confidence                           4778999999999865442221 1123467999999999985 5577999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccc----------cccccccCCccCC---CCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGER----------RRFYRLIDPRLEG---HFSIKGAQKAAQLAAHCLSRDPKARPL  428 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~~~Li~~cl~~dP~~RPs  428 (511)
                      |+.||......................          .............   ......+.++.+|+.+||+.||.+|||
T Consensus       209 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  288 (345)
T d1pmea_         209 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE  288 (345)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcC
Confidence            999997654322111111110000000          0000000000000   000112467899999999999999999


Q ss_pred             HHHHHHH
Q 010432          429 MSEVVEA  435 (511)
Q Consensus       429 ~~eil~~  435 (511)
                      +.|++++
T Consensus       289 a~e~L~h  295 (345)
T d1pmea_         289 VEQALAH  295 (345)
T ss_dssp             HHHHHTS
T ss_pred             HHHHhcC
Confidence            9999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=5.8e-49  Score=391.95  Aligned_cols=261  Identities=19%  Similarity=0.238  Sum_probs=200.7

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEe-
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIE-  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~-  206 (511)
                      ++|+++++||+|+||+||+|++..         +|+.||||+++...   .+++.+|+.+|+++. ||||+++++++.. 
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~---------~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~  102 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINIT---------NNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDP  102 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECT
T ss_pred             cCeEEEEEEecCcCeEEEEEEECC---------CCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEec
Confidence            579999999999999999999876         68899999997543   467889999999995 9999999999985 


Q ss_pred             -CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCcce
Q 010432          207 -DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF  285 (511)
Q Consensus       207 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~  285 (511)
                       ...+++|||||.+|+|..+.    ..+++..++.++.||+.||+|||+++   ||||||||+||||+.           
T Consensus       103 ~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~-----------  164 (328)
T d3bqca1         103 VSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDH-----------  164 (328)
T ss_dssp             TTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEET-----------
T ss_pred             CCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcC-----------
Confidence             35689999999999997764    36899999999999999999999999   999999999999984           


Q ss_pred             eeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHHHhCCC
Q 010432          286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR  364 (511)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~elltg~~  364 (511)
                                   ++..+||+|||+|+.......   ....+||+.|+|||++.+. .++.++|||||||++|||++|+.
T Consensus       165 -------------~~~~vkl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~  228 (328)
T d3bqca1         165 -------------EHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE  228 (328)
T ss_dssp             -------------TTTEEEECCGGGCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             -------------CCCeeeecccccceeccCCCc---ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCC
Confidence                         345699999999987655432   2346799999999998765 57999999999999999999999


Q ss_pred             CCCCCCCCCchhH-HHh----------hh-hhhccccccccccCC--------ccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010432          365 SMDKNRPNGEHNL-VEW----------AR-PHLGERRRFYRLIDP--------RLEGHFSIKGAQKAAQLAAHCLSRDPK  424 (511)
Q Consensus       365 pf~~~~~~~~~~~-~~~----------~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~Li~~cl~~dP~  424 (511)
                      ||........... +..          .. ........+......        ..........++++.+||.+||+.||.
T Consensus       229 pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~  308 (328)
T d3bqca1         229 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ  308 (328)
T ss_dssp             SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGG
T ss_pred             CCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChh
Confidence            9976543211100 000          00 000000000001000        001111122357789999999999999


Q ss_pred             CCCCHHHHHHH
Q 010432          425 ARPLMSEVVEA  435 (511)
Q Consensus       425 ~RPs~~eil~~  435 (511)
                      +|||++|+|++
T Consensus       309 ~R~ta~e~L~H  319 (328)
T d3bqca1         309 SRLTAREAMEH  319 (328)
T ss_dssp             GSCCHHHHHTS
T ss_pred             HCcCHHHHhcC
Confidence            99999999873

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.7e-48  Score=382.04  Aligned_cols=267  Identities=17%  Similarity=0.164  Sum_probs=210.7

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCC-CCcceEeeEEEe
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVH-LNLVKLIGYCIE  206 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H-~nIv~l~~~~~~  206 (511)
                      .++|+++++||+|+||+||+|++..         +|+.||||++......  ..+.+|+++++.|.| +||+.+++++..
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~---------~~~~vAvK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~   72 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLL---------NNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQE   72 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETT---------TTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEEccccCc--HHHHHHHHHHHHhcCCCCCCEEEEEeec
Confidence            3689999999999999999999876         6889999998654322  346789999999965 899999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      +...++||||| +|+|.+++......++...+..++.|++.||+|||+++   ||||||||+||||+.....        
T Consensus        73 ~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~--------  140 (293)
T d1csna_          73 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSK--------  140 (293)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSST--------
T ss_pred             CCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccc--------
Confidence            99999999999 78999999877778999999999999999999999999   9999999999999742110        


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcc-----eeeeeccccccccCCcccccCCCCccccchhHHHHHHHHHh
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ellt  361 (511)
                                  ..+.+||+|||+|+........     ......+||+.|||||++.+..++.++|||||||++|||++
T Consensus       141 ------------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~ellt  208 (293)
T d1csna_         141 ------------NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR  208 (293)
T ss_dssp             ------------TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------cCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHh
Confidence                        2567999999999875432211     12334689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcCC
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  439 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~L~~l  439 (511)
                      |+.||.+.................. ......     +...    .++++.+|+..||..+|++||+++.+.+.|+.+
T Consensus       209 g~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~-----l~~~----~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         209 GSLPWQGLKAATNKQKYERIGEKKQ-STPLRE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             SSCTTSSCCSCCHHHHHHHHHHHHH-HSCHHH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             CCCcCCCccchhHHHHHHHHHhccC-CCChHH-----hcCC----CCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            9999986654433222211111000 000000     1111    246789999999999999999999888877654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-48  Score=381.22  Aligned_cols=265  Identities=23%  Similarity=0.277  Sum_probs=205.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|++++.||+|+||+||+|++..         +++.||||+++.....  ....+.+|+.+|+.++|||||++++++..
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~---------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~   72 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS   72 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT---------TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCCEeeeEEecCcCeEEEEEEECC---------CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc
Confidence            579999999999999999999876         6789999999765432  34678999999999999999999999999


Q ss_pred             CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCccee
Q 010432          207 DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC  286 (511)
Q Consensus       207 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~~~~  286 (511)
                      .+..++|||++.+++|..++. ....+++..+..++.|++.||+|||+++   ||||||||+|||++.            
T Consensus        73 ~~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~------------  136 (292)
T d1unla_          73 DKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINR------------  136 (292)
T ss_dssp             SSEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT------------
T ss_pred             ccceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCccccccc------------
Confidence            999999999998888877764 4567899999999999999999999998   999999999999983            


Q ss_pred             eeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCC-CCccccchhHHHHHHHHHhCCCC
Q 010432          287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRRS  365 (511)
Q Consensus       287 ~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DIwSlGvil~elltg~~p  365 (511)
                                   +..+||+|||+|+........  .....+++.|+|||++.... ++.++|||||||++|||++|+.|
T Consensus       137 -------------~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p  201 (292)
T d1unla_         137 -------------NGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             -------------TCCEEECCCTTCEECCSCCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred             -------------CCceeeeecchhhcccCCCcc--ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCC
Confidence                         678999999999976554332  23346789999999887655 68999999999999999999999


Q ss_pred             CCCCCCCCchhHHHhhhhhhccc-----ccccccc---------CCccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010432          366 MDKNRPNGEHNLVEWARPHLGER-----RRFYRLI---------DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  431 (511)
Q Consensus       366 f~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs~~e  431 (511)
                      |.......  .............     .......         ............++.+.+||.+||+.||.+||||+|
T Consensus       202 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e  279 (292)
T d1unla_         202 LFPGNDVD--DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE  279 (292)
T ss_dssp             SCCCSSHH--HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCHH--HHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            85433211  1111111110000     0000000         000011122233577899999999999999999999


Q ss_pred             HHHH
Q 010432          432 VVEA  435 (511)
Q Consensus       432 il~~  435 (511)
                      |+++
T Consensus       280 ~L~H  283 (292)
T d1unla_         280 ALQH  283 (292)
T ss_dssp             HTTS
T ss_pred             HhcC
Confidence            9874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-49  Score=389.89  Aligned_cols=257  Identities=27%  Similarity=0.340  Sum_probs=204.4

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCc----ccHHHHHHHHHHHhCCCC-CCcceEeeE
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL----QGHKEWLAEVNFLGDLVH-LNLVKLIGY  203 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l~H-~nIv~l~~~  203 (511)
                      ++|++++.||+|+||+||+|++..+.      .+|+.||||+++....    ...+.+.+|+.+|++++| |||++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~   97 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGH------DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA   97 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSST------TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccC------CCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeee
Confidence            56999999999999999999885432      3788999999975422    223567899999999976 899999999


Q ss_pred             EEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEeccccccccCCc
Q 010432          204 CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF  283 (511)
Q Consensus       204 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~~~~  283 (511)
                      +.+....++|||||.+|+|.+++.... .+++..+..++.||+.||+|||+++   ||||||||+||||+          
T Consensus        98 ~~~~~~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~----------  163 (322)
T d1vzoa_          98 FQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLD----------  163 (322)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC----------
T ss_pred             eccCCceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeec----------
Confidence            999999999999999999999986543 6788899999999999999999998   99999999999998          


Q ss_pred             ceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC--CCCccccchhHHHHHHHHHh
Q 010432          284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLT  361 (511)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DIwSlGvil~ellt  361 (511)
                                     .++.+||+|||+|+........ ......||+.|+|||.+.+.  .++.++|||||||+||||++
T Consensus       164 ---------------~~~~vkL~DFG~a~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyellt  227 (322)
T d1vzoa_         164 ---------------SNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT  227 (322)
T ss_dssp             ---------------TTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCEEEeeccchhhhcccccc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHh
Confidence                           4778999999999876543322 23346799999999999754  46889999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 010432          362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  435 (511)
Q Consensus       362 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~~cl~~dP~~RPs-----~~eil~~  435 (511)
                      |+.||...........+...  ....            ...++...+.++.+||.+||++||.+|||     ++|++++
T Consensus       228 G~~PF~~~~~~~~~~~i~~~--~~~~------------~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         228 GASPFTVDGEKNSQAEISRR--ILKS------------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             SSCTTSCTTSCCCHHHHHHH--HHHC------------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             CCCCCCCCCHHHHHHHHHHh--cccC------------CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            99999876544332221111  1000            01112234678999999999999999995     7788753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-48  Score=387.53  Aligned_cols=263  Identities=23%  Similarity=0.274  Sum_probs=191.6

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEEe
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIE  206 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~~  206 (511)
                      ++|+++++||+|+||+||+|++..         +|+.||||++......  ....+.+|+.+|++++|||||+++++|..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~---------t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~   87 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAV---------LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP   87 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETT---------TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred             CCeEEEEEeecCcCeEEEEEEECC---------CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEec
Confidence            579999999999999999999876         7889999999865432  23468899999999999999999999964


Q ss_pred             ------CCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          207 ------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       207 ------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                            ...+|+|||||.+ +|.+.+.   ..+++..++.++.||+.||.|||+++   |+||||||+|||++       
T Consensus        88 ~~~~~~~~~~~iv~Ey~~~-~l~~~~~---~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~-------  153 (355)
T d2b1pa1          88 QKTLEEFQDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK-------  153 (355)
T ss_dssp             CCSTTTCCEEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC-------
T ss_pred             ccccccCceeEEEEeccch-HHHHhhh---cCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccc-------
Confidence                  3688999999965 5555553   36899999999999999999999999   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  360 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlGvil~ell  360 (511)
                                        .+..+||+|||+++.......   .+..+||+.|+|||++.+..++.++||||+||++|||+
T Consensus       154 ------------------~~~~~kl~df~~~~~~~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell  212 (355)
T d2b1pa1         154 ------------------SDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV  212 (355)
T ss_dssp             ------------------TTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             ------------------cccceeeechhhhhccccccc---cccccccccccChhhhcCCCCCCCcccccccchHHHHh
Confidence                              477899999999987654332   34467999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCchhHHHh-hh--------h-------hhccc-----cccccccCCcc---CCCCCHHHHHHHHHHHH
Q 010432          361 TGRRSMDKNRPNGEHNLVEW-AR--------P-------HLGER-----RRFYRLIDPRL---EGHFSIKGAQKAAQLAA  416 (511)
Q Consensus       361 tg~~pf~~~~~~~~~~~~~~-~~--------~-------~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~Li~  416 (511)
                      +|+.||.+.........+.. ..        .       .....     ...........   ........+.++.+||.
T Consensus       213 ~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~  292 (355)
T d2b1pa1         213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS  292 (355)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHH
Confidence            99999976532211110000 00        0       00000     00000000000   01112345788999999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 010432          417 HCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       417 ~cl~~dP~~RPs~~eil~~  435 (511)
                      +||+.||++||||+|||++
T Consensus       293 ~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         293 KMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHSCSSTTTSCCHHHHHTS
T ss_pred             HHCcCChhHCcCHHHHhcC
Confidence            9999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-47  Score=379.80  Aligned_cols=264  Identities=24%  Similarity=0.334  Sum_probs=196.1

Q ss_pred             hcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc--cHHHHHHHHHHHhCCCCCCcceEeeEEE
Q 010432          128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCI  205 (511)
Q Consensus       128 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H~nIv~l~~~~~  205 (511)
                      .++|+++++||+|+||+||+|++..         +|+.||||+++.....  ..+.+.+|+.+|++|+|||||++++++.
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~---------~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~   87 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTK---------TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   87 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETT---------TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECC---------CCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            4689999999999999999999875         6889999999865432  2346889999999999999999999986


Q ss_pred             eC-----CeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEecccccccc
Q 010432          206 ED-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY  280 (511)
Q Consensus       206 ~~-----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~~~~~~~~  280 (511)
                      ..     ...++||+|+.+|+|.+++..  ..+++..++.++.||+.||+|||+++   ||||||||+|||++       
T Consensus        88 ~~~~~~~~~~~~i~~~~~gg~L~~~~~~--~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~-------  155 (348)
T d2gfsa1          88 PARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVN-------  155 (348)
T ss_dssp             SCSSTTTCCCCEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC-------
T ss_pred             eccccccCceEEEEEeecCCchhhhccc--ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCcccccc-------
Confidence            43     334666777889999999854  46999999999999999999999999   99999999999998       


Q ss_pred             CCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccC-CCCccccchhHHHHHHHH
Q 010432          281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM  359 (511)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DIwSlGvil~el  359 (511)
                                        .++.+|++|||++......     .....||+.|+|||++.+. .++.++|||||||++|+|
T Consensus       156 ------------------~~~~~kl~dfg~a~~~~~~-----~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~l  212 (348)
T d2gfsa1         156 ------------------EDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL  212 (348)
T ss_dssp             ------------------TTCCEEECCC----CCTGG-----GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHH
T ss_pred             ------------------ccccccccccchhcccCcc-----cccccccccccCchhhcCCccCCcccchhhhhHHHHHH
Confidence                              4788999999999865432     2336799999999987765 468899999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHhhhhhhcc----------ccccccccCCccCCCC---CHHHHHHHHHHHHHhcccCCCCC
Q 010432          360 LTGRRSMDKNRPNGEHNLVEWARPHLGE----------RRRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCLSRDPKAR  426 (511)
Q Consensus       360 ltg~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~---~~~~~~~~~~Li~~cl~~dP~~R  426 (511)
                      ++|+.||.+.........+.........          ...............+   ....++.+.+||.+||+.||.+|
T Consensus       213 l~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R  292 (348)
T d2gfsa1         213 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR  292 (348)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhC
Confidence            9999999765432211111110000000          0000000000000000   01124678999999999999999


Q ss_pred             CCHHHHHHH
Q 010432          427 PLMSEVVEA  435 (511)
Q Consensus       427 Ps~~eil~~  435 (511)
                      ||+.|++++
T Consensus       293 ~ta~elL~H  301 (348)
T d2gfsa1         293 ITAAQALAH  301 (348)
T ss_dssp             CCHHHHHTS
T ss_pred             cCHHHHhcC
Confidence            999999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.6e-43  Score=352.60  Aligned_cols=269  Identities=21%  Similarity=0.239  Sum_probs=194.0

Q ss_pred             cCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-----------CCCc
Q 010432          129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-----------HLNL  197 (511)
Q Consensus       129 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-----------H~nI  197 (511)
                      ++|+++++||+|+||+||+|++..         +|+.||||+++.... ..+.+.+|+.+|+.++           |+||
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~---------~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~i   82 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMV---------NNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHI   82 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT---------TTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECC---------CCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCce
Confidence            459999999999999999999876         688999999986532 2356788999988875           5789


Q ss_pred             ceEeeEEEe--CCeEEEEEEccCCCCHHHH--HhhCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecccCCCcEEe
Q 010432          198 VKLIGYCIE--DDQRLLVYEFMPRGSLENH--LFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVIYRDFKTSNILL  272 (511)
Q Consensus       198 v~l~~~~~~--~~~~~lv~E~~~~g~L~~~--l~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~~~~iiHrDLKp~NILl  272 (511)
                      |++++++..  ....+++|+++..+.....  .......+++..+..++.||+.||+|||+ ++   |+||||||+||||
T Consensus        83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll  159 (362)
T d1q8ya_          83 LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLM  159 (362)
T ss_dssp             CCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEE
T ss_pred             EEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeee
Confidence            999998864  4566777777755543322  22345678999999999999999999997 77   9999999999999


Q ss_pred             ccccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhH
Q 010432          273 DAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  352 (511)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSl  352 (511)
                      +..+..                   .....+||+|||.+......     ....+||+.|+|||++.+..|+.++||||+
T Consensus       160 ~~~~~~-------------------~~~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  215 (362)
T d1q8ya_         160 EIVDSP-------------------ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWST  215 (362)
T ss_dssp             EEEETT-------------------TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHH
T ss_pred             eccCcc-------------------cccceeeEeecccccccccc-----cccccccccccChhhccccCCCccccccch
Confidence            853210                   01235899999999865432     233679999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchh----HHHhhhhhhcc-----------------ccccccccCC----------ccCC
Q 010432          353 GVVLLEMLTGRRSMDKNRPNGEHN----LVEWARPHLGE-----------------RRRFYRLIDP----------RLEG  401 (511)
Q Consensus       353 Gvil~elltg~~pf~~~~~~~~~~----~~~~~~~~~~~-----------------~~~~~~~~~~----------~~~~  401 (511)
                      ||+++||++|+.||..........    +..... .++.                 .......+..          ....
T Consensus       216 G~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (362)
T d1q8ya_         216 ACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY  294 (362)
T ss_dssp             HHHHHHHHHSSCCC---------CHHHHHHHHHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTT
T ss_pred             HHHHHHHHHCCCCCCCCccccccchhHHHHHHHH-HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhccccc
Confidence            999999999999997653322111    111000 0000                 0000000000          0122


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010432          402 HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  435 (511)
Q Consensus       402 ~~~~~~~~~~~~Li~~cl~~dP~~RPs~~eil~~  435 (511)
                      .+....++.+.+||.+||++||.+|||+.|+|++
T Consensus       295 ~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         295 KFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             CCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             ccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            3445678899999999999999999999999975

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=5.6e-26  Score=206.89  Aligned_cols=169  Identities=15%  Similarity=0.107  Sum_probs=119.5

Q ss_pred             CCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcc-------------c-----HHHHHHHHHHHhCCC
Q 010432          132 RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-------------G-----HKEWLAEVNFLGDLV  193 (511)
Q Consensus       132 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-------------~-----~~~~~~E~~il~~l~  193 (511)
                      .+.++||+|+||+||+|++.          +|+.||||+++.....             .     .....+|+..|.++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~----------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~   72 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE----------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ   72 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET----------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhCCEeeeCcceEEEEEECC----------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc
Confidence            35678999999999999874          4779999987642110             0     122456889999999


Q ss_pred             CCCcceEeeEEEeCCeEEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecccCCCcEEec
Q 010432          194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD  273 (511)
Q Consensus       194 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~~~~iiHrDLKp~NILl~  273 (511)
                      |.+++..+++.  .  .+|+|||+++..+.+        ++...+..++.|++.+|+|||+++   |+||||||+|||++
T Consensus        73 ~~~v~~~~~~~--~--~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~  137 (191)
T d1zara2          73 GLAVPKVYAWE--G--NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS  137 (191)
T ss_dssp             TSSSCCEEEEE--T--TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred             CCCcceEEEec--C--CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeee
Confidence            99999988653  2  379999998765543        334445678999999999999999   99999999999998


Q ss_pred             cccccccCCcceeeeccccccccccccCceeeecCCCcccCCCCCcceeeeeccccccccCCcccccCCCCccccchhHH
Q 010432          274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  353 (511)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DIwSlG  353 (511)
                                                +..++|+|||+|+............+.+..   + .+ +....|+.++|+||+.
T Consensus       138 --------------------------~~~~~liDFG~a~~~~~~~~~~~l~rd~~~---~-~~-~f~r~y~~~~d~~s~~  186 (191)
T d1zara2         138 --------------------------EEGIWIIDFPQSVEVGEEGWREILERDVRN---I-IT-YFSRTYRTEKDINSAI  186 (191)
T ss_dssp             --------------------------TTEEEECCCTTCEETTSTTHHHHHHHHHHH---H-HH-HHHHHHCCCCCHHHHH
T ss_pred             --------------------------CCCEEEEECCCcccCCCCCcHHHHHHHHHH---H-HH-HHcCCCCCcccHHHHH
Confidence                                      344899999999876543221100000000   0 01 1246788999999986


Q ss_pred             HHH
Q 010432          354 VVL  356 (511)
Q Consensus       354 vil  356 (511)
                      --+
T Consensus       187 ~~~  189 (191)
T d1zara2         187 DRI  189 (191)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.51  E-value=2.8e-07  Score=85.59  Aligned_cols=92  Identities=13%  Similarity=-0.038  Sum_probs=63.0

Q ss_pred             HHHHHhcCCCCCCccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEe
Q 010432          123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLI  201 (511)
Q Consensus       123 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~  201 (511)
                      ++....+.|+..+..+-++.+.||+...           .+..++||+...........+.+|+..|..|. +--+.+++
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-----------~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl   76 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-----------ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVL   76 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC-----------SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe-----------CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEE
Confidence            3344445676666555455678998753           34578889886543333345678888877663 44467888


Q ss_pred             eEEEeCCeEEEEEEccCCCCHHHH
Q 010432          202 GYCIEDDQRLLVYEFMPRGSLENH  225 (511)
Q Consensus       202 ~~~~~~~~~~lv~E~~~~g~L~~~  225 (511)
                      .+...++..++||++++|.++...
T Consensus        77 ~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          77 HFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEEETTEEEEEEECCSSEEHHHH
T ss_pred             EEEecCCceEEEEEeccccccccc
Confidence            888888999999999998877554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.78  E-value=8.2e-05  Score=67.86  Aligned_cols=73  Identities=21%  Similarity=0.130  Sum_probs=50.3

Q ss_pred             cccCCC-ceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC--CCCcceEeeEEEeCCeEEEE
Q 010432          137 LGEGGF-GCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV--HLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       137 lG~G~f-g~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~--H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +..|.. +.||+....          .+..+++|........   .+..|+..|+.|.  .-.+.+++.+..+++..++|
T Consensus        18 ~~~G~s~~~v~r~~~~----------~~~~~vlK~~~~~~~~---~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v   84 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQ----------GRPVLFVKTDLSGALN---ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL   84 (255)
T ss_dssp             CSCTTSSCEEEEEECT----------TSCCEEEEEECSCTTS---CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred             cCCcccCCeEEEEEeC----------CCCEEEEEeCCccCHh---HHHHHHHHHHHHHhcCCCCCceeeecccccceEEE
Confidence            444543 678988653          3556888987655432   3556777776663  33467788888888889999


Q ss_pred             EEccCCCCH
Q 010432          214 YEFMPRGSL  222 (511)
Q Consensus       214 ~E~~~~g~L  222 (511)
                      |++++|-++
T Consensus        85 ~~~i~G~~~   93 (255)
T d1nd4a_          85 LGEVPGQDL   93 (255)
T ss_dssp             EECCSSEET
T ss_pred             EEeeecccc
Confidence            999987654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.64  E-value=0.00012  Score=71.64  Aligned_cols=76  Identities=14%  Similarity=0.090  Sum_probs=47.7

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCC------C-cccHHHHHHHHHHHhCC-CC--CCcceEeeEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD------G-LQGHKEWLAEVNFLGDL-VH--LNLVKLIGYC  204 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~------~-~~~~~~~~~E~~il~~l-~H--~nIv~l~~~~  204 (511)
                      +.||.|....||+.....         +++.|+||.-...      . .....+...|+.+|+.+ .+  ..+.+++.+ 
T Consensus        32 ~eig~G~~N~vfrV~~~~---------~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  101 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQE---------HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-  101 (392)
T ss_dssp             EECCSSSSEEEEEEEC-------------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-
T ss_pred             EEeCCCceEeEEEEEeCC---------CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE-
Confidence            468999999999997654         4668999965321      1 11223455688887765 22  345666654 


Q ss_pred             EeCCeEEEEEEccCCCC
Q 010432          205 IEDDQRLLVYEFMPRGS  221 (511)
Q Consensus       205 ~~~~~~~lv~E~~~~g~  221 (511)
                       +++..++|||++.+..
T Consensus       102 -d~~~~~lvmE~L~~~~  117 (392)
T d2pula1         102 -DTEMAVTVMEDLSHLK  117 (392)
T ss_dssp             -ETTTTEEEECCCTTSE
T ss_pred             -cCCCCEEEEeccCCcc
Confidence             4556689999997643

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.48  E-value=0.0039  Score=60.49  Aligned_cols=80  Identities=18%  Similarity=0.084  Sum_probs=51.4

Q ss_pred             CccccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC-CCCcceEeeEEEeCCeEEEE
Q 010432          135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLV  213 (511)
Q Consensus       135 ~~lG~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~-H~nIv~l~~~~~~~~~~~lv  213 (511)
                      +.|+-|-.=.+|++.......  +.......|.+++.-..  .......+|..+++.+. +.-..++++++.  +  .+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~--~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~--~--g~I  119 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYP--PIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRL  119 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSC--CSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEE
T ss_pred             EEcCCccccceEEEEeCCCCc--cccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcC--C--ceE
Confidence            468878888999998765321  22224557777776532  22344568999988884 433447777663  2  689


Q ss_pred             EEccCCCCH
Q 010432          214 YEFMPRGSL  222 (511)
Q Consensus       214 ~E~~~~g~L  222 (511)
                      |||++|-.|
T Consensus       120 ~efi~g~~l  128 (395)
T d1nw1a_         120 EEYIPSRPL  128 (395)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeccccC
Confidence            999987443

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.011  Score=55.42  Aligned_cols=67  Identities=16%  Similarity=0.070  Sum_probs=43.2

Q ss_pred             ceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCCCCCc-----ceEe--eEEEeCCeEEEEEE
Q 010432          143 GCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNL-----VKLI--GYCIEDDQRLLVYE  215 (511)
Q Consensus       143 g~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H~nI-----v~l~--~~~~~~~~~~lv~E  215 (511)
                      -.||+++..          .|..|++|+.+.... ..+++..|...|..|....|     +..-  ..+...+..+.+++
T Consensus        36 N~vy~v~~~----------dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~  104 (325)
T d1zyla1          36 NRVYQFQDE----------DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  104 (325)
T ss_dssp             SEEEEECCT----------TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             ceeEEEEcC----------CCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEe
Confidence            479998764          477899999875532 34667788888877642221     1111  12345677889999


Q ss_pred             ccCCC
Q 010432          216 FMPRG  220 (511)
Q Consensus       216 ~~~~g  220 (511)
                      ++.|.
T Consensus       105 ~~~G~  109 (325)
T d1zyla1         105 SVGGR  109 (325)
T ss_dssp             CCCCE
T ss_pred             ecCCc
Confidence            99763

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.72  E-value=0.055  Score=50.00  Aligned_cols=89  Identities=10%  Similarity=-0.002  Sum_probs=46.9

Q ss_pred             cChHHHHHHhcCCCCCCcc-----ccCCCceEEEEEEcCCCCCCccCCCCcEEEEEEecCCCcccHHHHHHHHHHHhCCC
Q 010432          119 FTFNDLKLATRNFRPESLL-----GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV  193 (511)
Q Consensus       119 ~~~~~~~~~~~~y~~~~~l-----G~G~fg~V~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~  193 (511)
                      ++-+++.....+|.+.++.     ..|---+.|+.+...          | .+++|+.......  .++..|+.+|..|.
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~----------g-~yVLri~~~~~~~--~~l~~~~~~l~~L~   69 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK----------D-PLILTLYEKRVEK--NDLPFFLGLMQHLA   69 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS----------C-CEEEEEECC---C--CHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC----------C-cEEEEEcCCCCCH--HHHHHHHHHHHhhh
Confidence            4456666667778775543     355556789887542          3 5889998653221  33445666666653


Q ss_pred             C-----CCcceEe---eEEEeCCeEEEEEEccCCC
Q 010432          194 H-----LNLVKLI---GYCIEDDQRLLVYEFMPRG  220 (511)
Q Consensus       194 H-----~nIv~l~---~~~~~~~~~~lv~E~~~~g  220 (511)
                      .     |..+...   .+.........++.++.+.
T Consensus        70 ~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~~g~  104 (316)
T d2ppqa1          70 AKGLSCPLPLPRKDGELLGELSGRPAALISFLEGM  104 (316)
T ss_dssp             HTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCCB
T ss_pred             hccccccccceecCCCcceeeecccceeeeecccc
Confidence            2     2222211   0122345566777777663

>d1qu6a2 d.50.1.1 (A:91-179) dsRNA-dependent protein kinase pkr {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: dsRNA-dependent protein kinase pkr
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.69  E-value=0.007  Score=45.12  Aligned_cols=34  Identities=24%  Similarity=0.109  Sum_probs=29.3

Q ss_pred             cccccccccccchhhhhhhccccccccccccccc
Q 010432            7 NGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEEE   40 (511)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   40 (511)
                      ++++|+.|.|++|++||+.||+.++..+..+...
T Consensus        53 ~g~~~~~g~G~sKK~Akq~AA~~Al~~L~~~~~~   86 (89)
T d1qu6a2          53 GQKEYSIGTGSTKQEAKQLAAKLAYLQILSEETG   86 (89)
T ss_dssp             ETTBCCEEEESSHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCccccccccchHHHHHHHHHHHHHHHHHccCCC
Confidence            5678999999999999999999999888765543

>d1x48a1 d.50.1.1 (A:8-83) dsRNA-dependent protein kinase pkr {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: dsRNA-dependent protein kinase pkr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.48  E-value=0.0071  Score=43.56  Aligned_cols=33  Identities=12%  Similarity=0.032  Sum_probs=28.8

Q ss_pred             cccccccccccchhhhhhhcccccccccccccc
Q 010432            7 NGKVKKASWDSSKSKAKKKKKKVEDEVEVEEEE   39 (511)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   39 (511)
                      ++++|+.|+|++|++|++.||+.+.+.+..+.+
T Consensus        38 ~~~~~~~g~G~sKK~Aeq~AA~~Al~~L~~~~~   70 (76)
T d1x48a1          38 GQTMYGTGSGVTKQEAKQLAAKEAYQKLLKSPP   70 (76)
T ss_dssp             SSCEEEEEEESSHHHHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEeCCcCccHHHHHHHHHHHHHHHHHHccCC
Confidence            568899999999999999999999998865543

>d1x49a1 d.50.1.1 (A:8-92) dsRNA-dependent protein kinase pkr {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: dsRNA-dependent protein kinase pkr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.24  E-value=0.063  Score=39.24  Aligned_cols=32  Identities=19%  Similarity=0.163  Sum_probs=27.1

Q ss_pred             cccccccccccchhhhhhhccccccccccccc
Q 010432            7 NGKVKKASWDSSKSKAKKKKKKVEDEVEVEEE   38 (511)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   38 (511)
                      +++.|+.|+|++|++|++.||+.+.+.+..+.
T Consensus        47 ~g~~~~~g~g~sKK~Aeq~AA~~aL~~L~~~~   78 (85)
T d1x49a1          47 DEKEFPEAKGRSKQEARNAAAKLAVDILDNEN   78 (85)
T ss_dssp             SSCCCCCEEESSHHHHHHHHHHHHHHHHTTTC
T ss_pred             CceEeeccccccHHHHHHHHHHHHHHHHHHcC
Confidence            45778999999999999999999988775543

>d1qu6a1 d.50.1.1 (A:1-90) dsRNA-dependent protein kinase pkr {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: dsRNA-dependent protein kinase pkr
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.67  E-value=0.086  Score=38.92  Aligned_cols=32  Identities=25%  Similarity=0.246  Sum_probs=26.9

Q ss_pred             cccccccccccchhhhhhhccccccccccccc
Q 010432            7 NGKVKKASWDSSKSKAKKKKKKVEDEVEVEEE   38 (511)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   38 (511)
                      +++.++.|+|++|++|++.||+.+.+.+.++.
T Consensus        53 ~~~~~~~g~G~sKK~Aeq~AA~~aL~~L~~~~   84 (90)
T d1qu6a1          53 DGREFPEGEGRSKKEAKNAAAKLAVEILNKEK   84 (90)
T ss_dssp             SSSCCCEEECCSSHHHHHHHHHHHHHHHHSCC
T ss_pred             CceeeeccCCCcHHHHHHHHHHHHHHHHHhhC
Confidence            35677899999999999999999988776544

>d1x47a1 d.50.1.1 (A:8-92) Dgcr8 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: Dgcr8 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.11  E-value=0.12  Score=37.70  Aligned_cols=29  Identities=28%  Similarity=0.251  Sum_probs=24.7

Q ss_pred             cccccccccccchhhhhhhcccccccccc
Q 010432            7 NGKVKKASWDSSKSKAKKKKKKVEDEVEV   35 (511)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   35 (511)
                      ++++|+.|+|++|+.|++.||+.+.+.+.
T Consensus        48 ~g~~~~~g~G~sKK~Aeq~AA~~AL~~L~   76 (85)
T d1x47a1          48 DGVTYGSGTASSKKLAKNKAARATLEILI   76 (85)
T ss_dssp             TTEEEEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEecCCcchHHHHHHHHHHHHHHHHH
Confidence            35778999999999999999998876653