Citrus Sinensis ID: 010444

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Protein Sequence
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSSLQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSSLIQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRMELEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccccHHHHHHHHccccccccEEEcccccccEEEEEEcccccccccccHHHHccHHHHHHHHccccccccEEccccccEEEEEccHHHHHccccccEEEcccccEEccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccEEEEHHccccccccccccHHHHHHHHHHHHHcccccHHHccHHHccccccccccHccccccccc
Coil and Loop (DISEMBL)
MATNRFVCEICNkgfqrdqnlqlhrrghnlpwklrqrTTTEVRKrvyicpepscvhhnparalgdltgikkhfsrkhgekkwkcdkcskkyavQSDWKAhqktcgtreykcdcgtifsrrdsfITHRAFCDALAEENNKVNQGLMDNLGqnmqsqmpelmssmplntggnntslgmsefnnfdpknpmkslpqdlvpmpfksvnmggggggggggggmfssssgtlfggprsisssssslqlssnsssgfnylqdskngclisgTAHMSATALLQKAAQMGatassginspmmqksftnsmagpdqqlsstnktpaygsiqkqhnasydqqhfpsqaaheQQSNMMMQKATQDMSQLFDqhtgaastggmnndmGIMFTGMymssgggdhqgaaglgftknmenedssgssSLIQAGRNamernsttgpsrfggsnvtgggggggdmmtldfmgiggtrpanlHEQQQQRMELEAmshhqrvpmmtpfhqqqlphshgdsvlekptlwda
Flexible Loop (DISEMBL)
MATNRFVCEICNkgfqrdqnlqlhrrghnlpwklrqrtttEVRKRVYIcpepscvhhnparalgdlTGIKKHfsrkhgekkwkcdkcskkyavqsdwkahqktcgtreykcdcgtIFSRRDSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSSLQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSSLIQAGRNAMErnsttgpsrfggsNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRMELEAMSHHQRVPMMTPFHQqqlphshgdsvlekptlwda
Low Complexity Region (SEG)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEkkwkcdkcskkYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPFKSVNmggggggggggggmfssssgtlfggPRsisssssslqlssnsssGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSgggdhqgaaglgFTKNMENEDSSGSSSLIQAGRNAMERNSTTGPSRFGGSNVTgggggggDMMTLDFMGIGGTRPANLHEQQQQRMELEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA
Disordered region (IsUnstruct)
****RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAE***************************************************************************************************************************GCLISGT**************************************************************************************************************IMFTGM*********************************************************************************************************************************
Disordered Region (DISOPRED)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQ********************************************************************************************************************************TALLQKAAQ*************************************************************************************************************************************************************************TLDFMG*************************************************KPTLW**
Disordered Region (DISEMBL)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKK***************CSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLF*********************GFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQ***********************SQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNME**********IQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRMELEAMSHHQRVPMMTPFHQ*********SVLEKPTLWDA
Disordered Region (DISPRO)
**TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNK*******************************************************LVPMPFKSVNMG***********************************************************************AQMGATA****NSP***KSFTNSMAGP**QLSSTNKTPAY**************HFPSQAAHEQQSNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFT*****************************************************************GDMMTLDFMGIGGTRPANLHEQQQQRMELEAMSHHQRVPMMTPFHQQQLP****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSSLQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSSLIQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRMELEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	510	2.2.26 [Sep-21-2011]
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.545	0.549	0.498	2e-78
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.276	0.302	0.843	1e-75
Q700D2	503	Zinc finger protein JACKD	no	no	0.266	0.270	0.861	3e-73
Q943I6	522	Zinc finger protein STOP1	no	no	0.374	0.365	0.310	3e-20
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.252	0.258	0.342	6e-19
Q2QX40	465	Zinc finger protein STAR3	no	no	0.252	0.277	0.340	3e-18
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.239	0.402	0.343	1e-13
Q6P9S1	818	ATM interactor OS=Mus mus	yes	no	0.227	0.141	0.307	7e-11
O43313	823	ATM interactor OS=Homo sa	yes	no	0.156	0.097	0.353	1e-10
Q9HAZ2	1276	PR domain zinc finger pro	no	no	0.347	0.138	0.289	1e-07

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score =  293 bits (750), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 164/329 (49%), Positives = 197/329 (59%), Gaps = 51/329 (15%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QRT+ EVRKRVY+CPE SCVHH+P 
Sbjct: 65  MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPT 124

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KC+K+YAVQSDWKAH KTCGTREY+CDCGTIFSRR
Sbjct: 125 RALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 184

Query: 121 DSFITHRAFCDALAEENNKVN-----QGLMDNLGQNMQSQMPELMSSM---PLNTGGNNT 172
           DSFITHRAFCDALAEE  ++N     +      G N+      LM ++   P      + 
Sbjct: 185 DSFITHRAFCDALAEETARLNAASHLKSFAATAGSNLNYHY--LMGTLIPSPSLPQPPSF 242

Query: 173 SLGMSEF------------NNFDPKNPMK-------------------SLPQDLVPMPFK 201
             G  +             NNFD ++ MK                   ++   + P P  
Sbjct: 243 PFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTLSLWSGGNINHHQQVTIEDRMAPQPHS 302

Query: 202 SVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSI--------SSSSSSLQLSSNSSSGFNYL 253
                    G     G   ++S +L     +I        ++ ++SL + S  SS     
Sbjct: 303 PQEDYNWVFGNANNHGELITTSDSLITHDNNINIVQSKENANGATSLSVPSLFSSVDQIT 362

Query: 254 QDSKNGCLISGTAHMSATALLQKAAQMGA 282
           QD+         A+MSATALLQKAAQMGA
Sbjct: 363 QDANAA--SVAVANMSATALLQKAAQMGA 389

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score =  284 bits (726), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 119/141 (84%), Positives = 132/141 (93%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QRT+ EVRKRVY+CPE +CVHH+ +
Sbjct: 61  MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS 120

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKW C+KC+K+YAVQSDWKAH KTCGTREY+CDCGTIFSRR
Sbjct: 121 RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 180

Query: 121 DSFITHRAFCDALAEENNKVN 141
           DSFITHRAFCDALAEE  K+N
Sbjct: 181 DSFITHRAFCDALAEETAKIN 201

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score =  276 bits (706), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 118/137 (86%), Positives = 129/137 (94%), Gaps = 1/137 (0%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEV-RKRVYICPEPSCVHHNP 59
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR+  EV +K+VYICP  +CVHH+ 
Sbjct: 77  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDA 136

Query: 60  ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSR 119
           +RALGDLTGIKKH+SRKHGEKKWKC+KCSKKYAVQSDWKAH KTCGTREYKCDCGT+FSR
Sbjct: 137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196

Query: 120 RDSFITHRAFCDALAEE 136
           +DSFITHRAFCDAL EE
Sbjct: 197 KDSFITHRAFCDALTEE 213

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score =  100 bits (249), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 25/216 (11%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL--------RQRTTTEVRKRVYICPEP 52
           +A +   C IC KGF+RD NL++H RGH   +K         +  +        Y CP  
Sbjct: 277 LAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYV 336

Query: 53  SCV---HHNPARALGDLTGIKKHFSRKHGEKKWKCDKC-SKKYAVQSDWKAHQKTCGTRE 108
            C     H   + L  +  +K H+ R H +K + C +C +KK++V +D K H+K CG  +
Sbjct: 337 GCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDK 396

Query: 109 YKCDCGTIFSRRDSFITHRAF----CDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMP 164
           + C CGT FSR+D    H A       AL  ++ KV        G + Q Q  E M++M 
Sbjct: 397 WLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVT-------GASEQPQGSEAMNTMV 449

Query: 165 LNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPF 200
            + G N       +  N D K  M   P+   P+ F
Sbjct: 450 GSAGYNFPGSSSDDIPNLDMK--MADDPRYFSPLSF 483

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 14/143 (9%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRV----------YICP 50
           +A +   C IC KGF+RD NL++H RGH   +K         ++ V          Y CP
Sbjct: 239 LAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCP 298

Query: 51  EPSCV---HHNPARALGDLTGIKKHFSRKHGEKKWKCDKC-SKKYAVQSDWKAHQKTCGT 106
              C     H   + L  +  +K H+ R H +K + C +C +KK++V +D K H+K CG 
Sbjct: 299 FLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGK 358

Query: 107 REYKCDCGTIFSRRDSFITHRAF 129
            ++ C CGT FSR+D    H A 
Sbjct: 359 NKWLCSCGTTFSRKDKLFGHIAL 381

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 15/144 (10%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-----------LRQRTTTEVRKRVYIC 49
           +A +   C IC KGF+RD NL++H RGH   +K                     +R Y C
Sbjct: 224 LAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYSC 283

Query: 50  PEPSCVH---HNPARALGDLTGIKKHFSRKHGEKKWKCDKC-SKKYAVQSDWKAHQKTCG 105
           P   C     H   + L  +  +K H+ R H EK+  C +C +K+++V +D K H+K CG
Sbjct: 284 PHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCG 343

Query: 106 TREYKCDCGTIFSRRDSFITHRAF 129
              + C CGT FSR+D    H A 
Sbjct: 344 RDRWLCSCGTSFSRKDKLFAHVAL 367

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 12/134 (8%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKR------VYICPEPSC---VH 56
           F C +C K F R  NLQ+H  GH   ++    +    + R       Y C E  C   + 
Sbjct: 145 FSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVE-GCRNHID 203

Query: 57  HNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTI 116
           H  ++ L D   ++ H+ RKHG K + C  C K  AV+ DW+ H+K CG R + C CG+ 
Sbjct: 204 HPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKR-WVCVCGSD 262

Query: 117 FSRRDSFITH-RAF 129
           F  + S   H +AF
Sbjct: 263 FKHKRSLKDHVKAF 276

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6P9S1|ATMIN_MOUSE ATM interactor OS=Mus musculus GN=Atmin PE=2 SV=2

 Score = 69.3 bits (168), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 6   FVCEI--CNKGFQRDQNLQLHR-RGHNL------PWKLRQRTTTEVRKRVYICPEPSCVH 56
            +C +  C K       L +H  + H L      P  +R+  TT    + Y CP   C  
Sbjct: 80  ILCTVRGCGKILPNSPALNMHLVKSHRLQDGIVNP-TIRKDLTTA--PKFYCCPIKGC-P 135

Query: 57  HNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTI 116
             P R     + +K+HF + H EKK KC KCS  Y  + D K H++ CG + ++C CG  
Sbjct: 136 RGPDRPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWDLKRHEEDCG-KTFQCTCGCP 194

Query: 117 FSRRDSFITH 126
           ++ R +  +H
Sbjct: 195 YASRTALQSH 204

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Mus musculus (taxid: 10090)

>sp|O43313|ATMIN_HUMAN ATM interactor OS=Homo sapiens GN=ATMIN PE=1 SV=2

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 45  RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC 104
           + Y CP   C    P R     + +K+HF + H EKK KC KCS  Y  + D K H + C
Sbjct: 129 KFYCCPIEGC-PRGPERPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWDLKRHAEDC 187

Query: 105 GTREYKCDCGTIFSRRDSFITH 126
           G + ++C CG  ++ R +  +H
Sbjct: 188 G-KTFRCTCGCPYASRTALQSH 208

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Homo sapiens (taxid: 9606)

>sp|Q9HAZ2|PRD16_HUMAN PR domain zinc finger protein 16 OS=Homo sapiens GN=PRDM16 PE=1 SV=3

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 83/211 (39%), Gaps = 34/211 (16%)

Query: 4   NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL 63
            RF CE C K F    NLQ H R  +            V  R + CP+  C      +  
Sbjct: 335 KRFECENCVKVFTDPSNLQRHIRSQH------------VGARAHACPD--C-----GKTF 375

Query: 64  GDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQK---TCGTREYKC-DCGTIFSR 119
              +G+K+H       K + C+ C K Y   S+   H++    C T + KC DCG +FS 
Sbjct: 376 ATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRT-QIKCKDCGQMFST 434

Query: 120 RDSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEF 179
             S   HR FC    E  N    G +   G  +      +M     +   N+ SLG   F
Sbjct: 435 TSSLNKHRRFC----EGKNHYTPGGIFAPGLPLTPS--PMMDKAKPSPSLNHASLG---F 485

Query: 180 NNFDPKNPMK-SLPQDLVPMPFKSVNMGGGG 209
           N + P  P   SLP    P  F ++  G  G
Sbjct: 486 NEYFPSRPHPGSLPFSTAPPTFPALTPGFPG 516

Binds DNA and functions as a transcriptional regulator. Functions in the differentiation of brown adipose tissue (BAT) which is specialized in dissipating chemical energy in the form of heat in response to cold or excess feeding while white adipose tissue (WAT) is specialized in the storage of excess energy and the control of systemic metabolism. Together with CEBPB, regulates the differentiation of myoblastic precursors into brown adipose cells. Functions also as a repressor of TGF-beta signaling. Isoform 4 may regulate granulocytes differentiation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	510
359479820	570	PREDICTED: zinc finger protein MAGPIE [V	0.911	0.815	0.697	1e-173
255559270	631	nucleic acid binding protein, putative [	0.925	0.748	0.639	1e-172
319428678	515	zinc finger protein [Phaseolus vulgaris]	0.772	0.765	0.594	1e-141
357511205	521	Zinc finger protein [Medicago truncatula	0.839	0.821	0.557	1e-140
356505540	528	PREDICTED: zinc finger protein MAGPIE-li	0.837	0.808	0.558	1e-136
356572684	527	PREDICTED: zinc finger protein NUTCRACKE	0.841	0.814	0.563	1e-134
225450831	531	PREDICTED: zinc finger protein MAGPIE [V	0.868	0.834	0.543	1e-127
356502848	499	PREDICTED: zinc finger protein NUTCRACKE	0.690	0.705	0.572	1e-125
118486051	437	unknown [Populus trichocarpa]	0.849	0.990	0.521	1e-125
296089673	513	unnamed protein product [Vitis vinifera]	0.837	0.832	0.528	1e-124

>gi|359479820|ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 357/512 (69%), Positives = 400/512 (78%), Gaps = 47/512 (9%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTT E+RKRVYICPEPSCVHHNPA
Sbjct: 91  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTNEIRKRVYICPEPSCVHHNPA 150

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKCDKCSKKYAVQSDWKAH KTCGTREYKCDCGTIFSRR
Sbjct: 151 RALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 210

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFN 180
           DSFITHRAFCDALAEENNKVNQGLM N+G N+QSQMPELMSSMPLN+  ++ S+G+SEFN
Sbjct: 211 DSFITHRAFCDALAEENNKVNQGLMANMGSNLQSQMPELMSSMPLNS-NSSPSVGISEFN 269

Query: 181 NFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSSL 240
           ++DPKNP+KSLPQDLVPMPFKS NM GG           SSSSGTLFGGPRSISSSSS L
Sbjct: 270 SYDPKNPLKSLPQDLVPMPFKSPNMSGGMF---------SSSSGTLFGGPRSISSSSSGL 320

Query: 241 QLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNS 300
           QLSSNSSSGFNYLQD KNG  +SG+A+MSATALLQKAAQMGATAS+ INSPMMQKSF +S
Sbjct: 321 QLSSNSSSGFNYLQDGKNGTQLSGSANMSATALLQKAAQMGATASNSINSPMMQKSFVSS 380

Query: 301 MAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNM--------MMQKATQ 352
           MA P+  LSS   +P Y +IQ+Q N SYD  HF SQ        +         +QK   
Sbjct: 381 MAAPE--LSSIRPSP-YVTIQQQTN-SYD-HHFQSQPDQSPLVGINGGGLPSQFLQKGPP 435

Query: 353 DMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSS 412
           +++ LF   +G+AS   MNND+G MF  +++   GGD        F KNMENEDSS +SS
Sbjct: 436 EITPLFQTVSGSAS---MNNDIG-MFGNVFI---GGDQNSP----FLKNMENEDSSSTSS 484

Query: 413 LIQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRME 472
           L Q GR  M R S TGPSRFGG+      G G D+ TLD +G+GG+RP NL E QQQR+E
Sbjct: 485 LAQ-GRTVMAR-SATGPSRFGGN------GEGKDVTTLDLLGVGGSRPVNLQE-QQQRLE 535

Query: 473 LEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEK 504
           LEAMS H R+  MT F QQQL  SHG+  +E+
Sbjct: 536 LEAMSQH-RMQAMTTF-QQQL--SHGEPAIEQ 563

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559270|ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis] gi|223540040|gb|EEF41617.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 359/561 (63%), Positives = 408/561 (72%), Gaps = 89/561 (15%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEV+KRVYICPEP+CVHHNPA
Sbjct: 109 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVKKRVYICPEPTCVHHNPA 168

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSR- 119
           RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSR 
Sbjct: 169 RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRI 228

Query: 120 ---------------------------RDSFITHRAFCDALAEENNKVNQGLMDNLGQNM 152
                                      RDSFITHRAFCDALAEENNKVNQGL    G ++
Sbjct: 229 YVPALVCNLALLSISLLTLLFNDQSCRRDSFITHRAFCDALAEENNKVNQGLT---GSHL 285

Query: 153 QSQMPELMSSMPLNTGGNNTSLGMSEFNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGG 212
           Q+QMPELMSSMPL T   NTS+G+S+FN+FDPKNP+KSLPQ+LVPMPFKS+NM GG    
Sbjct: 286 QNQMPELMSSMPLTTN-TNTSIGISDFNSFDPKNPLKSLPQELVPMPFKSMNMAGG---- 340

Query: 213 GGGGGMFSSSSGTLFGGPRSISSSSSSLQLSSNSSSGFNYLQDSKNGCLISGTAHMSATA 272
                MFSSSSGTLFGGPRSI+S+SSSLQLSSNSSSG+NYLQD KNGC IS +A MSATA
Sbjct: 341 -----MFSSSSGTLFGGPRSIASTSSSLQLSSNSSSGYNYLQDGKNGCQISSSAQMSATA 395

Query: 273 LLQKAAQMGATASSGINSPMMQKSFTNSMAGPDQQL---SSTNKTPAYGSIQKQHNASYD 329
           LLQKAAQMGATAS+ INSPMMQKSF +SMA PDQ +       + P++G +Q QHN +  
Sbjct: 396 LLQKAAQMGATASNSINSPMMQKSFASSMACPDQIIPIRPQLPRPPSFGGVQ-QHNNTTS 454

Query: 330 QQHFPSQAAHEQ------------QSNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIM 377
             HFPS    +Q            Q N  +QK  Q+MSQ FD      S+ GM +DMG++
Sbjct: 455 YDHFPSSQLLDQTHLVGINGGGYNQPNGTLQKGQQEMSQFFD----PTSSSGM-SDMGML 509

Query: 378 FTGMYMSSGGGDHQGAAGLGFTKNME-----NEDSSGSSSLIQAGRNAMERNSTTGPSRF 432
            T M+M   G D       GF KN+E     ++DS  ++SLI    ++MER + +GPSR 
Sbjct: 510 ST-MFM---GTDQNP----GFMKNIEHSNNDHQDSGNTTSLIHGRAHSMER-TASGPSRL 560

Query: 433 GGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHE---QQQQRMELEAMSHHQRVPMMTPFH 489
            G N     G   DMMT DFMGIGG+RPANLHE   QQQQRME+ AMS  QR+PMM+ F 
Sbjct: 561 VGHN-----GESSDMMTRDFMGIGGSRPANLHEQQQQQQQRMEMGAMS-QQRMPMMSHF- 613

Query: 490 QQQLPHSHGDSVLEKPTLWDA 510
           QQQL  S G+S +EKP +W+ 
Sbjct: 614 QQQL--SLGESAMEKP-IWEV 631

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|319428678|gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris]

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 278/468 (59%), Positives = 326/468 (69%), Gaps = 74/468 (15%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRT+TEV+KRVY+CPEPSCVHHNPA
Sbjct: 86  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSTEVKKRVYVCPEPSCVHHNPA 145

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKCDKCSK+YAVQSDWKAHQKTCGTREYKCDCGTIFSRR
Sbjct: 146 RALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 205

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFN 180
           DSFITHRAFCDAL EENN+VNQGL   +  N+QSQ+P+LMS+MPLNT  N          
Sbjct: 206 DSFITHRAFCDALTEENNRVNQGLTSGMPPNLQSQIPDLMSTMPLNTSPNTA-------- 257

Query: 181 NFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSSL 240
            +DPKNP+KSLPQ+LVP+PFKS++M         GGGMFS+++G LFGGP+++  SSS+L
Sbjct: 258 -YDPKNPLKSLPQELVPIPFKSMSM---------GGGMFSTNAGALFGGPKTMPPSSSNL 307

Query: 241 QLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTNS 300
           QL SN+SS FNYLQD+K+  LI+ +A MSATALLQKAAQMG               F   
Sbjct: 308 QLGSNTSSSFNYLQDNKSAGLIAASAQMSATALLQKAAQMG---------------FVTG 352

Query: 301 MAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQS---------NMMMQKAT 351
              PD  +SST   P Y     QHN SY  +HF  Q      +         N +  K  
Sbjct: 353 TTAPD-HVSSTR--PPYSGAMLQHNNSY--EHFCPQPDLSNMAGVSGGGAFINQLFHKG- 406

Query: 352 QDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSS 411
           Q++SQ+FD +T  ++     ND+G MF+ M +   G DH      G  KN+E E  S  S
Sbjct: 407 QEISQVFDTNTAGSNI----NDVG-MFSQMPL---GSDHNP----GLMKNVEQE-VSNCS 453

Query: 412 SLIQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTL-DFMGIGGT 458
           SLI  GR+ +E N    PSRFGGS          DM T+ DF+GIGG+
Sbjct: 454 SLIH-GRDVVEGNPMQ-PSRFGGS----------DMTTVHDFLGIGGS 489

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511205|ref|XP_003625891.1| Zinc finger protein [Medicago truncatula] gi|355500906|gb|AES82109.1| Zinc finger protein [Medicago truncatula]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 294/527 (55%), Positives = 348/527 (66%), Gaps = 99/527 (18%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRT+ EV+K+VY+CPEPSCVHHNP+
Sbjct: 77  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSAEVKKKVYVCPEPSCVHHNPS 136

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKHFSRKHGEKKWKCDKCSK+YAVQSDWKAHQKTCGTREYKCDCGTIFSRR
Sbjct: 137 RALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 196

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFN 180
           DSFITHRAFCDAL EENN+VNQGL   +  N+QSQM + +S+MPL    N +    SE N
Sbjct: 197 DSFITHRAFCDALTEENNRVNQGLTSGMPPNLQSQMHDPISTMPLKPVSNTS----SELN 252

Query: 181 N-FDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSS 239
           N +DPKN ++S  Q+  P  F+S N           GGMFS+S+G LFGGP+++  SSS+
Sbjct: 253 NDYDPKNSLRSPSQEHAPTSFRSTN--------NACGGMFSTSAGALFGGPKTLPPSSST 304

Query: 240 LQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTN 299
           LQLSSNS+S FNY  DSKNG LI+G A MSATALLQKAAQMGATAS+  NS MMQKSF  
Sbjct: 305 LQLSSNSNS-FNYFNDSKNGGLIAGMAQMSATALLQKAAQMGATASNSGNSSMMQKSFVG 363

Query: 300 SMAGPDQQLSSTNKTPAYGSIQKQHN---ASYDQQHF-PSQAAHEQQ-----------SN 344
           SM  P+            GSI   HN    SY+  HF P Q  HE             +N
Sbjct: 364 SMVSPNH---------VSGSIMMHHNQNQPSYE--HFNPLQ--HELSNMAGVSGGGAFTN 410

Query: 345 MMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMEN 404
            + QK  Q++S LFD +T  ++   MNND+G MF+          H      G  KN+  
Sbjct: 411 QLFQKEQQEISLLFDNNTNVST---MNNDIG-MFS----------HH-----GLMKNV-G 450

Query: 405 EDSSGSSSLIQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTL-DFMGIGGTRPANL 463
           ++ S  S+LI                             G D+ T+ DF+GIGG+  ++L
Sbjct: 451 QEVSNCSNLIH----------------------------GNDVATVHDFLGIGGSS-SSL 481

Query: 464 HEQQQQRMELEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA 510
           HE QQQR  LEA+S  QR+ +M  FH   LPH   DS +EK ++WD 
Sbjct: 482 HEPQQQR--LEALS-QQRLEIMNNFH-HHLPHE--DSAMEK-SIWDV 521

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505540|ref|XP_003521548.1| PREDICTED: zinc finger protein MAGPIE-like [Glycine max]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 291/521 (55%), Positives = 344/521 (66%), Gaps = 94/521 (18%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRT+ EV+KRVY+CPEPSCVHHNPA
Sbjct: 91  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSAEVKKRVYVCPEPSCVHHNPA 150

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKCDKCSK+YAVQSDWKAHQKTCGTREYKCDCGTIFSRR
Sbjct: 151 RALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 210

Query: 121 DSFITHRAFCDALAEENNKV-NQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEF 179
           DSFITHRAFCDAL EENN+V NQGL   +  N+QS++P+LMS+MPL T  N T    ++F
Sbjct: 211 DSFITHRAFCDALTEENNRVNNQGLTSGMPPNLQSKIPDLMSTMPLTTSPNTT----TKF 266

Query: 180 NNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSS 239
            ++DPKNP+KSL Q+LVP+PFK  +M         GGGMFS+++G  FGGP+++S SSSS
Sbjct: 267 GDYDPKNPLKSLAQELVPIPFKPTSM---------GGGMFSTNAGARFGGPKTMSPSSSS 317

Query: 240 LQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTN 299
           LQL S++SS FNYLQDSKNG LI+ +A MSATALLQKAAQMG                  
Sbjct: 318 LQLGSSTSSSFNYLQDSKNGGLIAASAQMSATALLQKAAQMGFVGG-------------- 363

Query: 300 SMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQS---------NMMMQKA 350
           +  GPD  +S T + P YG++  QHN SYD  HF  Q      +         N +  K 
Sbjct: 364 TTTGPD-HVSFTTRPPYYGAML-QHNNSYD--HFSPQHDLSNMAGVSGGGAFINQLFHKG 419

Query: 351 TQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGS 410
            Q++SQ+FD +T     G        MF+ M M   G +H    GL   KN+E E S+G 
Sbjct: 420 -QEISQVFDTNTTMNGVG--------MFSQMPM---GSEHNHNQGL--MKNVEQEVSNG- 464

Query: 411 SSLIQAGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTL-DFMGIGGTRPANLHEQQQQ 469
           SSLI   R+  + N T  PSRFGGS          DM T+ DF+GIGG+           
Sbjct: 465 SSLIHV-RDVSDGNHTMQPSRFGGS----------DMTTVHDFLGIGGST---------- 503

Query: 470 RMELEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA 510
                      RV  M  FH    PH   DS +E+P +WD 
Sbjct: 504 ----------SRV--MNHFH-HHFPHE--DSAIEEP-MWDV 528

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572684|ref|XP_003554496.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 294/522 (56%), Positives = 348/522 (66%), Gaps = 93/522 (17%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRT+TEV+KRVY+CPEPSCVHHNPA
Sbjct: 87  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSTEVKKRVYVCPEPSCVHHNPA 146

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKCDKCSK+YAVQSDWKAHQKTCGTREYKCDCGTIFSRR
Sbjct: 147 RALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 206

Query: 121 DSFITHRAFCDALAEENNKV-NQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEF 179
           DSFITHRAFCDAL EENN+V NQGL   +  N+QSQ+P+LMS+MPL T  N      S+F
Sbjct: 207 DSFITHRAFCDALTEENNRVNNQGLTSGMPPNLQSQIPDLMSTMPLTTSPNTA----SKF 262

Query: 180 NNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSS 239
             +DPKNP+KSL Q+LVP+PFK ++M         GGGMFS+++G LFGGP+++S SSSS
Sbjct: 263 GEYDPKNPLKSLAQELVPIPFKFMSM---------GGGMFSTNAGALFGGPKTMSPSSSS 313

Query: 240 LQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGINSPMMQKSFTN 299
           LQL S++SS FNYLQDS+NG LI+ +A MSATALLQKAAQMG  +               
Sbjct: 314 LQLGSSTSSSFNYLQDSENGGLIAASAQMSATALLQKAAQMGFVSG-------------- 359

Query: 300 SMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHF---PSQAAHEQQS------NMMMQKA 350
           +  GPD  +SST + P Y     QHN SYD  HF   P  ++  + S      N +  K 
Sbjct: 360 TTTGPD-HVSSTTR-PPYSGAMLQHNNSYD--HFSPQPDLSSMAEVSGGGAFINQLFHKG 415

Query: 351 TQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGS 410
            Q++SQ+FD +    + G   ND+G MF  M M   G DH      G  K++E E  S S
Sbjct: 416 -QEISQVFDTN----NPGSAMNDVG-MFGQMPM---GRDHHNQ---GLMKSVEQE-VSNS 462

Query: 411 SSLIQAGRNAMERNSTTGPS-RFGGSNVTGGGGGGGDMMTL-DFMGIGGTRPANLHEQQQ 468
           SSL+  GR+  + N    PS RFGGS          DM T+ DF+GIGG+          
Sbjct: 463 SSLMH-GRDVNDGNHPMQPSTRFGGS----------DMTTVHDFLGIGGST--------- 502

Query: 469 QRMELEAMSHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA 510
                       RV  M  FH    PH   DS +E+P +WD 
Sbjct: 503 -----------SRV--MNHFH-HHFPHE--DSTIEEP-MWDV 527

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450831|ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 281/517 (54%), Positives = 346/517 (66%), Gaps = 74/517 (14%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR++TE+RKRVY+CPEPSCVHHNPA
Sbjct: 82  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKRVYVCPEPSCVHHNPA 141

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKCDKCSKKYAVQSDWKAH KTCGTREYKCDCGTIFSRR
Sbjct: 142 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 201

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNM--QSQMPELMSSMPLNTGGNNTSLGMSE 178
           DSFITHRAFCDALAEEN KVNQGL + + +N+  Q Q+ EL+SSMPLN   N+T +G+SE
Sbjct: 202 DSFITHRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNST-MGLSE 260

Query: 179 FNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSS 238
           F + D KN +K+LP + +P+P K +NM           GMFS++SG+LFG P + SS SS
Sbjct: 261 FTHSDSKNHLKTLPHEPMPVPPKPLNM--------AAAGMFSTTSGSLFGCPITASSPSS 312

Query: 239 S--LQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGI-NSPMMQK 295
           S  LQLS+NSSS     ++ +       +  MSATALLQKAAQMGATAS+ + NSP   K
Sbjct: 313 SSRLQLSTNSSSP--SFENGQQLPPPPASTLMSATALLQKAAQMGATASTKMNNSP--PK 368

Query: 296 SFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMS 355
            F  SMA           TP +G I  Q N+S +  H             +    TQ ++
Sbjct: 369 GFVTSMA----------PTP-FGGILLQKNSSSNDHH-------------LQADPTQFLN 404

Query: 356 QLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSSLIQ 415
           Q F Q+ GA S   + ++MG MF+G++      +H      G  KNME+ + S S++++ 
Sbjct: 405 QFFYQNDGAESE--VMSEMG-MFSGLF----DQNH------GLFKNMEHHEHSNSNNILA 451

Query: 416 AGRNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRMEL-E 474
           A         TT P   G S+      G  D MT+DF+GIGG RP N H QQQQ+ E+ E
Sbjct: 452 A--------KTTNP---GLSSTP--RNGKTDTMTVDFLGIGGARPGNFHGQQQQQQEMFE 498

Query: 475 AMS-HHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA 510
            M+ +H R+   + F Q     +HG + +EK T+W+A
Sbjct: 499 GMNINHPRMQGFSSFEQHI---AHGQAAMEK-TMWEA 531

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502848|ref|XP_003520227.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/433 (57%), Positives = 299/433 (69%), Gaps = 81/433 (18%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR + EV+KRVY+CPEPSC+HHNPA
Sbjct: 88  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRGSNEVKKRVYVCPEPSCIHHNPA 147

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKCDKCSK+YAVQSDWKAHQKTCGTREYKCDCGTIFSRR
Sbjct: 148 RALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 207

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLG--QNMQSQMPELM-SSMPLNTGGNNTSLGMS 177
           DSFITHRAFCDAL EEN++VN  L   +     +++++P+L+ ++MPL+   NN+++  S
Sbjct: 208 DSFITHRAFCDALTEENSRVNHLLTSGMAPTTTLENELPDLIATTMPLSASSNNSTV--S 265

Query: 178 EF-NNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSS---SSGTLFGGPRSI 233
           EF NN+D K+P++   + +VPMPFKS +M         GGGMFS+   S+GTLFGGP+++
Sbjct: 266 EFNNNYDTKSPLQ---EHIVPMPFKSTSM---------GGGMFSNTTFSAGTLFGGPKNM 313

Query: 234 S-SSSSSLQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATAS---SGIN 289
           S  SSS+LQLSSN+S+ FNY QDSKN    S ++HMSATALLQKA QMGATAS   S IN
Sbjct: 314 SHPSSSTLQLSSNNSTAFNYFQDSKNA---SASSHMSATALLQKATQMGATASNNNSIIN 370

Query: 290 SP-MMQKSFTNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQ------ 342
           SP MMQKSF ++M GPD                  H +SYD  H P+             
Sbjct: 371 SPTMMQKSFISAMTGPDH----------------NHISSYDHFHHPNPDDQSHNMAGISN 414

Query: 343 ----SNMMMQKATQDMSQLFDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGF 398
               +N+   K  Q+MS +FD +T          DMG MF  + M               
Sbjct: 415 AGAFTNLFFHKGQQEMSLIFDSNTS---------DMG-MFGPILM--------------- 449

Query: 399 TKNMENEDSSGSS 411
            KN+E E  +GSS
Sbjct: 450 -KNVEQEIGTGSS 461

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486051|gb|ABK94869.1| unknown [Populus trichocarpa]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/514 (52%), Positives = 324/514 (63%), Gaps = 81/514 (15%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QRTT E+RKRVY+CPEPSCVHHNPA
Sbjct: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTTAEIRKRVYVCPEPSCVHHNPA 60

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKCDKCSKKYAVQSDWKAH KTCGT+EYKCDCGTIFSRR
Sbjct: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHVKTCGTKEYKCDCGTIFSRR 120

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMPLNTGGNNTSLGMSEFN 180
           DSFITHRAFCDALAEEN K NQGLM N+  N+Q Q+  L+ SM +N   N +++ MS FN
Sbjct: 121 DSFITHRAFCDALAEENTKANQGLMPNMEPNLQGQVSNLIPSMAINNNPNQSTM-MSSFN 179

Query: 181 NFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSSSL 240
           + D KNP+ SLPQ+L+P P K              G MFS+ +  LFGG RS+   S SL
Sbjct: 180 HLDAKNPL-SLPQELMPTPPKP-----------SSGSMFSNGTTGLFGGSRSM---SPSL 224

Query: 241 QLSSNSSSGF--NYLQDSKNGCLISGTAHMSATALLQKAAQMGATASS-GINSPMMQKSF 297
           QL++NSS+ F  N L +      +SG+A MSATALLQKAAQMGATASS  ++SPMMQKSF
Sbjct: 225 QLNANSSTIFEGNGLHN------LSGSASMSATALLQKAAQMGATASSNNVSSPMMQKSF 278

Query: 298 TNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMSQL 357
             SMA            P +G++  Q+    DQ H             ++       +Q 
Sbjct: 279 VTSMA-----------PPTFGTMHTQN----DQSH-------------VIGGDDGYANQF 310

Query: 358 FDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSSLIQAG 417
           F  + G  ++  + NDMGI        S   D   +      K ME+  S+  +    A 
Sbjct: 311 FSANGGVENS--VLNDMGIF-------SAVLDQNNS----LFKTMEHASSNNENVFQGAN 357

Query: 418 RNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQ-QQRMELEAM 476
            N    + T+G +  G S  +      GD+MT+DF+G+GG+R  NLH+Q   Q ME    
Sbjct: 358 SNPGLSSPTSGANPSGLSRFS-----TGDVMTVDFLGLGGSRQRNLHQQHNHQEMEFTRG 412

Query: 477 SHHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA 510
             H R+        Q L H    + L+KP +WD 
Sbjct: 413 ISHPRM--------QGLNHFEQATALKKP-MWDV 437

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089673|emb|CBI39492.3| unnamed protein product [Vitis vinifera]

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/515 (52%), Positives = 335/515 (65%), Gaps = 88/515 (17%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR++TE+RKRVY+CPEPSCVHHNPA
Sbjct: 82  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKRVYVCPEPSCVHHNPA 141

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKCDKCSKKYAVQSDWKAH KTCGTREYKCDCGTIFSRR
Sbjct: 142 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 201

Query: 121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNM--QSQMPELMSSMPLNTGGNNTSLGMSE 178
           DSFITHRAFCDALAEEN KVNQGL + + +N+  Q Q+ EL+SSMPLN   N+T +G+SE
Sbjct: 202 DSFITHRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNST-MGLSE 260

Query: 179 FNNFDPKNPMKSLPQDLVPMPFKSVNMGGGGGGGGGGGGMFSSSSGTLFGGPRSISSSSS 238
           F + D KN +K+LP + +P+P K +NM           GMFS++SG+LFG P + +S  +
Sbjct: 261 FTHSDSKNHLKTLPHEPMPVPPKPLNM--------AAAGMFSTTSGSLFGCPIT-ASFEN 311

Query: 239 SLQLSSNSSSGFNYLQDSKNGCLISGTAHMSATALLQKAAQMGATASSGI-NSPMMQKSF 297
             QL    +S                   MSATALLQKAAQMGATAS+ + NSP   K F
Sbjct: 312 GQQLPPPPASTL-----------------MSATALLQKAAQMGATASTKMNNSP--PKGF 352

Query: 298 TNSMAGPDQQLSSTNKTPAYGSIQKQHNASYDQQHFPSQAAHEQQSNMMMQKATQDMSQL 357
             SMA           TP +G I  Q N+S +  H             +    TQ ++Q 
Sbjct: 353 VTSMA----------PTP-FGGILLQKNSSSNDHH-------------LQADPTQFLNQF 388

Query: 358 FDQHTGAASTGGMNNDMGIMFTGMYMSSGGGDHQGAAGLGFTKNMENEDSSGSSSLIQAG 417
           F Q+ GA S   + ++MG MF+G++      +H      G  KNME+ + S S++++ A 
Sbjct: 389 FYQNDGAESE--VMSEMG-MFSGLF----DQNH------GLFKNMEHHEHSNSNNILAA- 434

Query: 418 RNAMERNSTTGPSRFGGSNVTGGGGGGGDMMTLDFMGIGGTRPANLHEQQQQRMEL-EAM 476
                   TT P   G S+      G  D MT+DF+GIGG RP N H QQQQ+ E+ E M
Sbjct: 435 -------KTTNP---GLSSTP--RNGKTDTMTVDFLGIGGARPGNFHGQQQQQQEMFEGM 482

Query: 477 S-HHQRVPMMTPFHQQQLPHSHGDSVLEKPTLWDA 510
           + +H R+   + F Q     +HG + +EK T+W+A
Sbjct: 483 NINHPRMQGFSSFEQHI---AHGQAAMEK-TMWEA 513

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	510
TAIR|locus:2101739	452	IDD2 "AT3G50700" [Arabidopsis	0.268	0.303	0.802	2.9e-71
TAIR|locus:2173624	500	IDD1 "AT5G66730" [Arabidopsis	0.321	0.328	0.701	4.7e-71
TAIR|locus:2024193	506	MGP "AT1G03840" [Arabidopsis t	0.276	0.278	0.808	6.8e-71
TAIR|locus:2205672	455	IDD7 "AT1G55110" [Arabidopsis	0.268	0.301	0.782	1.1e-69
TAIR|locus:2167608	466	NUC "AT5G44160" [Arabidopsis t	0.276	0.302	0.794	1.2e-69
TAIR|locus:2051698	602	IDD5 "AT2G02070" [Arabidopsis	0.268	0.227	0.766	3.7e-68
TAIR|locus:2143543	503	JKD "AT5G03150" [Arabidopsis t	0.286	0.290	0.743	1.8e-66
TAIR|locus:2078262	446	AT3G45260 "AT3G45260" [Arabido	0.268	0.307	0.768	7.7e-66
TAIR|locus:2051688	516	IDD4 "indeterminate(ID)-domain	0.266	0.263	0.75	3.3e-65
TAIR|locus:2204503	467	AT1G14580 "AT1G14580" [Arabido	0.268	0.293	0.766	1.8e-64

TAIR|locus:2101739 IDD2 "AT3G50700" [Arabidopsis thaliana (taxid:3702)]

 Score = 628 (226.1 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
 Identities = 110/137 (80%), Positives = 120/137 (87%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ++  EV+K+VY+CPE SCVHH+P+
Sbjct:    58 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPS 117

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHGE           YAVQSDWKAH K CGT+EYKCDCGT+FSRR
Sbjct:   118 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR 177

Query:   121 DSFITHRAFCDALAEEN 137
             DSFITHRAFCDALAEEN
Sbjct:   178 DSFITHRAFCDALAEEN 194

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2173624 IDD1 "AT5G66730" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 4.7e-71, Sum P(3) = 4.7e-71
 Identities = 115/164 (70%), Positives = 128/164 (78%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR+T EVRK+VY+CP   CVHH+P+
Sbjct:    56 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPS 115

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHGE           YAVQSDWKAH K CGT+EYKCDCGT+FSRR
Sbjct:   116 RALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR 175

Query:   121 DSFITHRAFCDALAEENNKVNQGLMDNLGQNMQSQMPELMSSMP 164
             DSFITHRAFCDALAEE+ K +        + +  + PE+    P
Sbjct:   176 DSFITHRAFCDALAEESAKNHTQSKKLYPETVTRKNPEIEQKSP 219

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009937 "regulation of gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010431 "seed maturation" evidence=IMP

TAIR|locus:2024193 MGP "AT1G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
 Identities = 114/141 (80%), Positives = 122/141 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QRT+ EVRKRVY+CPE SCVHH+P 
Sbjct:    65 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPT 124

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHGE           YAVQSDWKAH KTCGTREY+CDCGTIFSRR
Sbjct:   125 RALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 184

Query:   121 DSFITHRAFCDALAEENNKVN 141
             DSFITHRAFCDALAEE  ++N
Sbjct:   185 DSFITHRAFCDALAEETARLN 205

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2205672 IDD7 "AT1G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 621 (223.7 bits), Expect = 1.1e-69, Sum P(3) = 1.1e-69
 Identities = 108/138 (78%), Positives = 121/138 (87%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEV-RKRVYICPEPSCVHHNP 59
             MATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKL+QR+  +V RK+VY+CPEP CVHH+P
Sbjct:    87 MATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHP 146

Query:    60 ARALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSR 119
             +RALGDLTGIKKHF RKHGE           YAVQSDWKAH KTCGT+EYKCDCGT+FSR
Sbjct:   147 SRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSR 206

Query:   120 RDSFITHRAFCDALAEEN 137
             RDSFITHRAFCDALAEE+
Sbjct:   207 RDSFITHRAFCDALAEES 224

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2167608 NUC "AT5G44160" [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
 Identities = 112/141 (79%), Positives = 122/141 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             MATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QRT+ EVRKRVY+CPE +CVHH+ +
Sbjct:    61 MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS 120

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHGE           YAVQSDWKAH KTCGTREY+CDCGTIFSRR
Sbjct:   121 RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 180

Query:   121 DSFITHRAFCDALAEENNKVN 141
             DSFITHRAFCDALAEE  K+N
Sbjct:   181 DSFITHRAFCDALAEETAKIN 201

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010260 "organ senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2051698 IDD5 "AT2G02070" [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
 Identities = 105/137 (76%), Positives = 123/137 (89%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             MATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q++T EV+++VY+CPEPSCVHH+P+
Sbjct:    76 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPS 135

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKH+ RKHGE           YAVQSDWKAH KTCGT+EY+CDCGT+FSRR
Sbjct:   136 RALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSRR 195

Query:   121 DSFITHRAFCDALAEEN 137
             DSFITHRAFCDALA+E+
Sbjct:   196 DSFITHRAFCDALAQES 212

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2143543 JKD "AT5G03150" [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
 Identities = 110/148 (74%), Positives = 124/148 (83%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEV-RKRVYICPEPSCVHHNP 59
             MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR+  EV +K+VYICP  +CVHH+ 
Sbjct:    77 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDA 136

Query:    60 ARALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSR 119
             +RALGDLTGIKKH+SRKHGE           YAVQSDWKAH KTCGTREYKCDCGT+FSR
Sbjct:   137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196

Query:   120 RDSFITHRAFCDALAEENNKVNQGLMDN 147
             +DSFITHRAFCDAL EE  +++  L +N
Sbjct:   197 KDSFITHRAFCDALTEEGARMSS-LSNN 223

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010075 "regulation of meristem growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0048364 "root development" evidence=IMP

GO:0051302 "regulation of cell division" evidence=IMP

GO:0045604 "regulation of epidermal cell differentiation" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2078262 AT3G45260 "AT3G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 607 (218.7 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
 Identities = 106/138 (76%), Positives = 119/138 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTE-VRKRVYICPEPSCVHHNP 59
             M TNRF+CE+CNKGF+RDQNLQLHRRGHNLPWKL+QRT  E V+K+VYICPE +CVHH+P
Sbjct:    63 MTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDP 122

Query:    60 ARALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSR 119
             ARALGDLTGIKKHFSRKHGE           YAV SDWKAH K CGT+EY+CDCGT+FSR
Sbjct:   123 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSR 182

Query:   120 RDSFITHRAFCDALAEEN 137
             +DSFITHRAFCDALAEE+
Sbjct:   183 KDSFITHRAFCDALAEES 200

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2051688 IDD4 "indeterminate(ID)-domain 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 610 (219.8 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 102/136 (75%), Positives = 121/136 (88%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             MATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKL+Q++T EV+++VY+CPEP+CVHH+P+
Sbjct:    78 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 137

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKH+ RKHGE           YAVQSDWKAH KTCGT+EY+CDCGTIFSRR
Sbjct:   138 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 197

Query:   121 DSFITHRAFCDALAEE 136
             DS+ITHRAFCDAL +E
Sbjct:   198 DSYITHRAFCDALIQE 213

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2204503 AT1G14580 "AT1G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
 Identities = 105/137 (76%), Positives = 121/137 (88%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPA 60
             MATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q++  EVR++VY+CPEPSCVHH+PA
Sbjct:    77 MATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPA 136

Query:    61 RALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKTCGTREYKCDCGTIFSRR 120
             RALGDLTGIKKH+ RKHGE           YAVQSDWKAH KTCGT+EY+CDCGTIFSRR
Sbjct:   137 RALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 196

Query:   121 DSFITHRAFCDALAEEN 137
             DS+ITHRAFCDAL +E+
Sbjct:   197 DSYITHRAFCDALIQES 213

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	510
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.85
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.82
KOG3576	267	consensus Ovo and related transcription factors [T	99.66
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.64
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.48
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.47
KOG3608	467	consensus Zn finger proteins [General function pre	99.37
KOG3608	467	consensus Zn finger proteins [General function pre	99.34
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.31
KOG3576	267	consensus Ovo and related transcription factors [T	99.24
PLN03086	567	PRLI-interacting factor K; Provisional	99.2
PHA00733	128	hypothetical protein	98.91
PHA00733	128	hypothetical protein	98.81
PLN03086	567	PRLI-interacting factor K; Provisional	98.57
PHA02768	55	hypothetical protein; Provisional	98.51
KOG3993	500	consensus Transcription factor (contains Zn finger	98.46
KOG3993	500	consensus Transcription factor (contains Zn finger	98.31
PHA02768	55	hypothetical protein; Provisional	98.25
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.11
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.72
PHA00616	44	hypothetical protein	97.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.59
PHA00732	79	hypothetical protein	97.58
PHA00616	44	hypothetical protein	97.58
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.52
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	97.46
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.4
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.38
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.37
PHA00732	79	hypothetical protein	97.32
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.11
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.92
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.77
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.38
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.19
smart00355	26	ZnF_C2H2 zinc finger.	96.0
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.98
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.74
KOG1146	1406	consensus Homeobox protein [General function predi	95.73
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.55
COG5048	467	FOG: Zn-finger [General function prediction only]	95.11
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.89
PRK04860	160	hypothetical protein; Provisional	94.85
smart00355	26	ZnF_C2H2 zinc finger.	94.65
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.95
PRK04860	160	hypothetical protein; Provisional	93.87
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	93.81
COG5048	467	FOG: Zn-finger [General function prediction only]	93.56
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	93.32
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.55
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.5
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.16
KOG1146	1406	consensus Homeobox protein [General function predi	91.81
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	90.8
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.42
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	89.27
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	88.86
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.76
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	84.59
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	84.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	84.2
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	83.45
KOG2893	341	consensus Zn finger protein [General function pred	83.18
KOG2186	276	consensus Cell growth-regulating nucleolar protein	82.81
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	81.95
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	80.73

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.85  E-value=4.7e-22  Score=196.56  Aligned_cols=119  Identities=24%  Similarity=0.477  Sum_probs=77.2

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCC---Ccc---------------cccccccccccceeeCCCCCCCCCCCCCccC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNL---PWK---------------LRQRTTTEVRKRVYICPEPSCVHHNPARALG   64 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~---p~k---------------~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~   64 (510)
                      ..+|+|..|+|.|.+.++|-+|+.+|..   +..               ++.+.++|  .-+++|.+|       +|+|.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH--~l~c~C~iC-------GKaFS  198 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTH--TLPCECGIC-------GKAFS  198 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhcc--CCCcccccc-------ccccc
Confidence            3467888888888888888888877751   000               11111221  245666666       67777


Q ss_pred             ChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHh
Q 010444           65 DLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus        65 ~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~h  130 (510)
                      +...|+-|+|+|+|||||.|..|+|+|+.+++|+.|++|| +.|+|.|. |+|.|.+++.|.+|....
T Consensus       199 RPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  199 RPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             chHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            7777777777777777777777777777777777777775 66677776 777777777777776543

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.82  E-value=6.9e-21  Score=188.34  Aligned_cols=91  Identities=18%  Similarity=0.407  Sum_probs=84.2

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccCh
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRR  120 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~k  120 (510)
                      .++.+.|++|       +|.|.....|+.|+|+|+  -+++|.+|||+|.+.+-|+.|+|+| |||||.|. |+|.|..+
T Consensus       158 s~ka~~C~~C-------~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADR  228 (279)
T KOG2462|consen  158 SKKAFSCKYC-------GKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADR  228 (279)
T ss_pred             ccccccCCCC-------CceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcch
Confidence            4788999998       999999999999999998  6899999999999999999999995 99999999 99999999


Q ss_pred             hHHHHHHHHhccccccchhhhc
Q 010444          121 DSFITHRAFCDALAEENNKVNQ  142 (510)
Q Consensus       121 ssL~~H~r~hh~~~~~~~k~~~  142 (510)
                      ++|+.|+++|.......|..+.
T Consensus       229 SNLRAHmQTHS~~K~~qC~~C~  250 (279)
T KOG2462|consen  229 SNLRAHMQTHSDVKKHQCPRCG  250 (279)
T ss_pred             HHHHHHHHhhcCCccccCcchh
Confidence            9999999999888777666554

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.66  E-value=3.5e-17  Score=155.64  Aligned_cols=119  Identities=23%  Similarity=0.525  Sum_probs=108.0

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~   82 (510)
                      ...|.|.+|+|.|.....|.+|++.|.             ..|.|.|..|       +|.|.+...|++|.|+|++.+||
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~-------------~vkr~lct~c-------gkgfndtfdlkrh~rthtgvrpy  174 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHS-------------DVKRHLCTFC-------GKGFNDTFDLKRHTRTHTGVRPY  174 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhcc-------------HHHHHHHhhc-------cCcccchhhhhhhhccccCcccc
Confidence            456999999999999999999999997             6788999998       99999999999999999999999


Q ss_pred             ccCcCCccccChhHHHHHHHH-hC-----------CCceecC-CCCcccChhHHHHHHHHhccccccchhhh
Q 010444           83 KCDKCSKKYAVQSDWKAHQKT-CG-----------TREYKCD-CGTIFSRRDSFITHRAFCDALAEENNKVN  141 (510)
Q Consensus        83 ~C~~CgK~F~~ks~Lk~H~rt-hg-----------eKpykC~-Cgk~F~~kssL~~H~r~hh~~~~~~~k~~  141 (510)
                      +|..|+|.|+++..|..|++. |+           +|.|+|+ |+..-.+.+.+..|++.+|...+.-.+..
T Consensus       175 kc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~SpallKfs  246 (267)
T KOG3576|consen  175 KCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPALLKFS  246 (267)
T ss_pred             chhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHHHHHHH
Confidence            999999999999999999986 65           3679999 99999999999999999997766655544

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.64  E-value=1.3e-16  Score=173.03  Aligned_cols=112  Identities=23%  Similarity=0.540  Sum_probs=99.4

Q ss_pred             ccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccC-------
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHG-------   78 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g-------   78 (510)
                      ..|++|.++|++...|+.|++..+           +..+..|.|..|       .+.|.++..|.+|+.+|..       
T Consensus       211 ltcpycdrgykrltslkeHikyrh-----------ekne~nfsC~lC-------sytFAyRtQLErhm~~hkpg~dqa~s  272 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRH-----------EKNEPNFSCMLC-------SYTFAYRTQLERHMQLHKPGGDQAIS  272 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHH-----------hhCCCCCcchhh-------hhhhhhHHHHHHHHHhhcCCCccccc
Confidence            579999999999999999998765           346778999999       8999999999999999862       


Q ss_pred             ------CcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHH--Hhccccc
Q 010444           79 ------EKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRA--FCDALAE  135 (510)
Q Consensus        79 ------eKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r--~hh~~~~  135 (510)
                            -|+|+|..|+|+|+.+-+|+.|+|+| |||||.|+ |.|+|+...++..|+.  +|-.+..
T Consensus       273 ltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSKKCIsli~  339 (1007)
T KOG3623|consen  273 LTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSKKCISLIL  339 (1007)
T ss_pred             ccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccccchhhhhc
Confidence                  47899999999999999999999996 99999999 9999999999999984  4444333

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.48  E-value=4.2e-15  Score=163.89  Aligned_cols=80  Identities=20%  Similarity=0.455  Sum_probs=73.9

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHhCCCc-----eecC----CCC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTRE-----YKCD----CGT  115 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKp-----ykC~----Cgk  115 (510)
                      .+..|-+|       -|++..++.|+.|+|+|+|||||+|++|+++|+.+.+||.|+.+|..||     |.|+    |.+
T Consensus       604 dPNqCiiC-------~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~  676 (958)
T KOG1074|consen  604 DPNQCIIC-------LRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQK  676 (958)
T ss_pred             Cccceeee-------eecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcc
Confidence            35688887       8999999999999999999999999999999999999999999997765     8887    999


Q ss_pred             cccChhHHHHHHHHhc
Q 010444          116 IFSRRDSFITHRAFCD  131 (510)
Q Consensus       116 ~F~~kssL~~H~r~hh  131 (510)
                      .|...-.|..|++.|.
T Consensus       677 kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  677 KFTNAVTLPQHIRIHL  692 (958)
T ss_pred             cccccccccceEEeec
Confidence            9999999999999987

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.47  E-value=1e-14  Score=160.88  Aligned_cols=50  Identities=26%  Similarity=0.602  Sum_probs=47.0

Q ss_pred             cccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhc
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh  131 (510)
                      -.|-+|-|....++.|+.|+|+| |||||||+ |++.|.+|.+|+.|+-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk  657 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHK  657 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccc
Confidence            36999999999999999999996 99999999 9999999999999998775

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.37  E-value=4.2e-13  Score=136.61  Aligned_cols=107  Identities=25%  Similarity=0.489  Sum_probs=66.4

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhh-hccCCcc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKK   81 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H~geKp   81 (510)
                      +++|.|..|.|.|.++..|+.|++.|-               ..|+|+.|       .......+.|.+|++ +|..+||
T Consensus       235 ~n~fqC~~C~KrFaTeklL~~Hv~rHv---------------n~ykCplC-------dmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  235 TNSFQCAQCFKRFATEKLLKSHVVRHV---------------NCYKCPLC-------DMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             CCchHHHHHHHHHhHHHHHHHHHHHhh---------------hccccccc-------ccCCCChHHHHHHHHhhhccCCC
Confidence            346666666666666666666666653               34666666       555666666666655 4555666


Q ss_pred             cccCcCCccccChhHHHHHHHHhCCCceecC---CCCcccChhHHHHHHHHhc
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTCGTREYKCD---CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~---Cgk~F~~kssL~~H~r~hh  131 (510)
                      |+|+.|.++|.+.++|.+|..+|-+-.|.|+   |...|+++..|++|++.+|
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            6666666666666666666666555556664   6666666666666665444

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.34  E-value=5e-13  Score=136.02  Aligned_cols=117  Identities=22%  Similarity=0.425  Sum_probs=95.2

Q ss_pred             cccc--ccCcccCChHHHHHHHHhcCCCccc-----------------ccccccccccceeeCCCCCCCCCCCCCccCCh
Q 010444            6 FVCE--ICNKGFQRDQNLQLHRRGHNLPWKL-----------------RQRTTTEVRKRVYICPEPSCVHHNPARALGDL   66 (510)
Q Consensus         6 y~C~--~CgK~F~~~s~Lk~H~r~H~~p~k~-----------------~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~   66 (510)
                      +.|.  .|-+.|..+.+|++|+|.|+.+..+                 +.+-.......+|.|..|       -|+|.+.
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C-------~KrFaTe  250 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQC-------FKRFATE  250 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHH-------HHHHhHH
Confidence            4565  4889999999999999999744331                 111122334568888888       8899999


Q ss_pred             hHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-h-CCCceecC-CCCcccChhHHHHHHHHhc
Q 010444           67 TGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-C-GTREYKCD-CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus        67 s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-h-geKpykC~-Cgk~F~~kssL~~H~r~hh  131 (510)
                      ..|+.|+++|-  .-|+|+.|.-.....+.|..|+|. | ..|||||+ |.++|.+.+.|.+|..+|.
T Consensus       251 klL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  251 KLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            99999998885  469999999999999999999999 6 88999999 9999999999999999875

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.31  E-value=4.7e-13  Score=145.81  Aligned_cols=80  Identities=21%  Similarity=0.559  Sum_probs=75.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSR  119 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~  119 (510)
                      +.+..|.|+.|       .|+|...+.|.+|...|+|.|||+|.+|.|+|+.+-+|..|+|.| |||||.|+ |+|+|+.
T Consensus       890 te~gmyaCDqC-------DK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSH  962 (1007)
T KOG3623|consen  890 TEDGMYACDQC-------DKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSH  962 (1007)
T ss_pred             CccccchHHHH-------HHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhccc
Confidence            35678999999       899999999999999999999999999999999999999999996 99999999 9999999


Q ss_pred             hhHHHHHHH
Q 010444          120 RDSFITHRA  128 (510)
Q Consensus       120 kssL~~H~r  128 (510)
                      ..++..||-
T Consensus       963 SGSYSQHMN  971 (1007)
T KOG3623|consen  963 SGSYSQHMN  971 (1007)
T ss_pred             ccchHhhhc
Confidence            999999984

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.24  E-value=1.7e-12  Score=124.00  Aligned_cols=84  Identities=25%  Similarity=0.496  Sum_probs=78.5

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccCh
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRR  120 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~k  120 (510)
                      ....|.|.+|       +|.|.....|.+|++.|...|.|.|..|+|.|...-+|++|+|+| |.+||+|. |+|.|..+
T Consensus       114 d~d~ftCrvC-------gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  114 DQDSFTCRVC-------GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             CCCeeeeehh-------hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence            3567999999       999999999999999999999999999999999999999999995 99999999 99999999


Q ss_pred             hHHHHHHHHhccc
Q 010444          121 DSFITHRAFCDAL  133 (510)
Q Consensus       121 ssL~~H~r~hh~~  133 (510)
                      -+|..|++.-|+.
T Consensus       187 csleshl~kvhgv  199 (267)
T KOG3576|consen  187 CSLESHLKKVHGV  199 (267)
T ss_pred             ccHHHHHHHHcCc
Confidence            9999999876643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.20  E-value=3.1e-11  Score=132.01  Aligned_cols=105  Identities=21%  Similarity=0.429  Sum_probs=90.7

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~   82 (510)
                      ++.+.|++|++.|. ...|+.|++.|+               +++.|+ |       ++.+ .+..|..|+++|..+|++
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H---------------kpv~Cp-C-------g~~~-~R~~L~~H~~thCp~Kpi  505 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH---------------EPLQCP-C-------GVVL-EKEQMVQHQASTCPLRLI  505 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC---------------CCccCC-C-------CCCc-chhHHHhhhhccCCCCce
Confidence            56789999999996 678999999874               579999 7       7655 678999999999999999


Q ss_pred             ccCcCCcccc----------ChhHHHHHHHHhCCCceecC-CCCcccChhHHHHHHHHhccc
Q 010444           83 KCDKCSKKYA----------VQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        83 ~C~~CgK~F~----------~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      .|.+|++.|.          ....|+.|.++++.+++.|. |++.|..+ .|..|+..+|..
T Consensus       506 ~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~~  566 (567)
T PLN03086        506 TCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIAVHQK  566 (567)
T ss_pred             eCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHHhhcC
Confidence            9999999995          24589999999999999999 99999887 578899887753

>PHA00733 hypothetical protein

Probab=98.91  E-value=1.1e-09  Score=99.31  Aligned_cols=85  Identities=14%  Similarity=0.252  Sum_probs=69.7

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhH--h---hhccCCcccccCcCCccccChhHHHHHHHHhCCCceecC-CCCc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKH--F---SRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTI  116 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H--~---r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~  116 (510)
                      ..+++.|.+|       .+.|.....|..|  +   ..++.++||+|+.|++.|.....|+.|++.+ +++|.|+ |++.
T Consensus        37 ~~~~~~~~~~-------~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~  108 (128)
T PHA00733         37 EQKRLIRAVV-------KTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKE  108 (128)
T ss_pred             hhhhHHHHHH-------hhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCc
Confidence            4678999998       5666665555444  1   1334589999999999999999999999986 5689999 9999


Q ss_pred             ccChhHHHHHHHHhccccc
Q 010444          117 FSRRDSFITHRAFCDALAE  135 (510)
Q Consensus       117 F~~kssL~~H~r~hh~~~~  135 (510)
                      |.....|.+|++..|+++.
T Consensus       109 F~~~~sL~~H~~~~h~~~~  127 (128)
T PHA00733        109 FRNTDSTLDHVCKKHNICV  127 (128)
T ss_pred             cCCHHHHHHHHHHhcCccc
Confidence            9999999999999988763

>PHA00733 hypothetical protein

Probab=98.81  E-value=4.5e-09  Score=95.32  Aligned_cols=84  Identities=17%  Similarity=0.213  Sum_probs=71.4

Q ss_pred             CCcccccccCcccCChHHHHHH--HHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLH--RRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H--~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      .+++.|.+|.+.|.....|..|  ++.|.         . ....++|.|+.|       ++.|.....|..|++.|  ++
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~---------~-~~~~kPy~C~~C-------gk~Fss~s~L~~H~r~h--~~   98 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLL---------T-SKAVSPYVCPLC-------LMPFSSSVSLKQHIRYT--EH   98 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhc---------c-cCCCCCccCCCC-------CCcCCCHHHHHHHHhcC--Cc
Confidence            5789999999999999888887  33331         1 124789999999       99999999999999987  46


Q ss_pred             ccccCcCCccccChhHHHHHHHH-hC
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKT-CG  105 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rt-hg  105 (510)
                      +|.|++|++.|.....|++|++. |+
T Consensus        99 ~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         99 SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            89999999999999999999988 64

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.57  E-value=1.3e-07  Score=104.05  Aligned_cols=122  Identities=19%  Similarity=0.352  Sum_probs=89.2

Q ss_pred             ccccccCcccCChHHHHHHHHhcCC-----Cc-ccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHNL-----PW-KLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~~-----p~-k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      -+|..|.+.... .+|..|......     |. .+.........++.+.|+.|       ++.|. ...|++|++.|+  
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~C-------gk~f~-~s~LekH~~~~H--  476 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKC-------GQAFQ-QGEMEKHMKVFH--  476 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCC-------CCccc-hHHHHHHHHhcC--
Confidence            469999887655 557889854421     10 12222233345677899998       88885 678999999986  


Q ss_pred             cccccCcCCccccChhHHHHHHHH-hCCCceecC-CCCcccC----------hhHHHHHHHHhccccccchhhh
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSR----------RDSFITHRAFCDALAEENNKVN  141 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~F~~----------kssL~~H~r~hh~~~~~~~k~~  141 (510)
                      +++.|+ |++.+ .+..|..|+++ +.+|++.|. |++.|..          ...|..|...| +.....|..+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~C  547 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSC  547 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEcccc
Confidence            899999 99765 66899999998 699999999 9999952          35899999886 4444555433

>PHA02768 hypothetical protein; Provisional

Probab=98.51  E-value=4.7e-08  Score=75.80  Aligned_cols=41  Identities=20%  Similarity=0.475  Sum_probs=25.6

Q ss_pred             cccCcCCccccChhHHHHHHHHhCCCceecC-CCCcccChhHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSF  123 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL  123 (510)
                      |+|++|+|.|.+.++|..|+++|. ++|+|. |++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            566666666666666666666654 566666 66666655544

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.46  E-value=5.4e-08  Score=101.75  Aligned_cols=78  Identities=23%  Similarity=0.494  Sum_probs=63.6

Q ss_pred             ccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC------
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE------   79 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge------   79 (510)
                      |.|..|...|.....|-+|+....             ....|+|++|       +|.|....+|..|.|.|.-.      
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RI-------------V~vEYrCPEC-------~KVFsCPANLASHRRWHKPR~eaa~a  327 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRI-------------VHVEYRCPEC-------DKVFSCPANLASHRRWHKPRPEAAKA  327 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCee-------------EEeeecCCcc-------cccccCchhhhhhhcccCCchhhhhc
Confidence            889999999999999999975432             3456999998       89999999999999998621      


Q ss_pred             ---------------------------cccccCcCCccccChhHHHHHHHH
Q 010444           80 ---------------------------KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 ---------------------------Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                                                 --|.|.+|+|+|.++..|+.|+-+
T Consensus       328 ~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlt  378 (500)
T KOG3993|consen  328 GSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLT  378 (500)
T ss_pred             CCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHh
Confidence                                       137888899999998888888654

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.31  E-value=3.6e-07  Score=95.73  Aligned_cols=85  Identities=19%  Similarity=0.425  Sum_probs=73.5

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHhCCC-----------------
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTR-----------------  107 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeK-----------------  107 (510)
                      ..|.|..|       ...|.+...|.+|...-...-.|+|+.|+|.|....+|..|.|+|.-|                 
T Consensus       266 GdyiCqLC-------K~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~  338 (500)
T KOG3993|consen  266 GDYICQLC-------KEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVET  338 (500)
T ss_pred             HHHHHHHH-------HHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhh
Confidence            45999999       899999999999988766667899999999999999999999987321                 


Q ss_pred             -----------------ceecC-CCCcccChhHHHHHHHHhcccccc
Q 010444          108 -----------------EYKCD-CGTIFSRRDSFITHRAFCDALAEE  136 (510)
Q Consensus       108 -----------------pykC~-Cgk~F~~kssL~~H~r~hh~~~~~  136 (510)
                                       .|.|. |+|.|++...|++|+..|+.....
T Consensus       339 rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  339 RAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             hhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccc
Confidence                             28899 999999999999999998765433

>PHA02768 hypothetical protein; Provisional

Probab=98.25  E-value=4.1e-07  Score=70.61  Aligned_cols=44  Identities=14%  Similarity=0.287  Sum_probs=40.7

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHH
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWK   98 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk   98 (510)
                      -|.|++|       ++.|.....|.+|+++|+  ++|+|..|+|.|.+.+.|.
T Consensus         5 ~y~C~~C-------GK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPIC-------GEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchh-------CCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999       999999999999999999  7999999999999888764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.11  E-value=1.3e-06  Score=57.72  Aligned_cols=26  Identities=31%  Similarity=0.822  Sum_probs=22.1

Q ss_pred             HHHhHhhhccCCcccccCcCCccccC
Q 010444           68 GIKKHFSRKHGEKKWKCDKCSKKYAV   93 (510)
Q Consensus        68 ~Lk~H~r~H~geKp~~C~~CgK~F~~   93 (510)
                      +|.+|+++|+++|||+|++|+|+|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47889999999999999999998863

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.72  E-value=2.2e-05  Score=51.86  Aligned_cols=24  Identities=42%  Similarity=0.956  Sum_probs=21.7

Q ss_pred             HHHHHHHHh-CCCceecC-CCCcccC
Q 010444           96 DWKAHQKTC-GTREYKCD-CGTIFSR  119 (510)
Q Consensus        96 ~Lk~H~rth-geKpykC~-Cgk~F~~  119 (510)
                      +|++|+++| ++|||+|+ |++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            589999995 99999999 9999974

...

>PHA00616 hypothetical protein

Probab=97.70  E-value=1.5e-05  Score=59.27  Aligned_cols=34  Identities=12%  Similarity=0.241  Sum_probs=31.1

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      ||+|..||+.|..++.|.+|++.|+             +++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h-------------g~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH-------------KQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc-------------CCCccceeE
Confidence            7999999999999999999999998             778888764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.59  E-value=1.6e-05  Score=80.98  Aligned_cols=50  Identities=30%  Similarity=0.646  Sum_probs=34.4

Q ss_pred             CcccccCc--CCccccChhHHHHHHHH-h-------------------CCCceecC-CCCcccChhHHHHHHH
Q 010444           79 EKKWKCDK--CSKKYAVQSDWKAHQKT-C-------------------GTREYKCD-CGTIFSRRDSFITHRA  128 (510)
Q Consensus        79 eKp~~C~~--CgK~F~~ks~Lk~H~rt-h-------------------geKpykC~-Cgk~F~~kssL~~H~r  128 (510)
                      +|||+|++  |.|+|+.+.-|+-|+.. |                   ..|||+|+ |+|+|+....|+-|++
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            36666655  66666666666666553 2                   24888888 8888888888888764

>PHA00732 hypothetical protein

Probab=97.58  E-value=5.3e-05  Score=63.33  Aligned_cols=48  Identities=23%  Similarity=0.412  Sum_probs=33.3

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      ||+|++|++.|.+...|+.|++.++             .  ++.|+.|       ++.|.   .|..|++++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H-------------~--~~~C~~C-------gKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH-------------T--LTKCPVC-------NKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc-------------C--CCccCCC-------CCEeC---ChhhhhcccC
Confidence            5788888888888888888887432             1  2467777       77776   4667776554

>PHA00616 hypothetical protein

Probab=97.58  E-value=3.1e-05  Score=57.58  Aligned_cols=32  Identities=9%  Similarity=0.311  Sum_probs=16.9

Q ss_pred             ccccCcCCccccChhHHHHHHHH-hCCCceecC
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD  112 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~  112 (510)
                      ||+|..|++.|..++.|..|++. |+++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            34555555555555555555555 455555544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.52  E-value=2.3e-05  Score=79.83  Aligned_cols=56  Identities=29%  Similarity=0.679  Sum_probs=47.8

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc-------------------CCcccccCcCCccccChhHHHHHHHH
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH-------------------GEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~-------------------geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      .+|||+|++.+|     .|.|+....|+-|+.-=|                   ..|||+|++|+|+|+...-|+-|...
T Consensus       346 d~KpykCpV~gC-----~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         346 DGKPYKCPVEGC-----NKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             cCceecCCCCCc-----hhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            359999999999     999999999999976322                   25899999999999999999988653

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=97.46  E-value=0.00079  Score=75.55  Aligned_cols=124  Identities=18%  Similarity=0.261  Sum_probs=82.7

Q ss_pred             ccccccCccc---------------CChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCC--CCCCccCChhH
Q 010444            6 FVCEICNKGF---------------QRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHH--NPARALGDLTG   68 (510)
Q Consensus         6 y~C~~CgK~F---------------~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~--~~~k~F~~~s~   68 (510)
                      +.|.+|.+.|               .....|+.|++.-|               +.+.|.+|-|..-  ...+..-+...
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H---------------~~~~c~lC~~~~kif~~e~k~Yt~~e  164 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQH---------------KLHLCSLCLQNLKIFINERKLYTRAE  164 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhh---------------hhhccccccccceeeeeeeehehHHH
Confidence            5666666666               37778999985433               2345555533110  11233345667


Q ss_pred             HHhHhhhcc-CCc----ccccCcCCccccChhHHHHHHHHhCCCceecC----CCCcccChhHHHHHHHHhccccccchh
Q 010444           69 IKKHFSRKH-GEK----KWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD----CGTIFSRRDSFITHRAFCDALAEENNK  139 (510)
Q Consensus        69 Lk~H~r~H~-geK----p~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~----Cgk~F~~kssL~~H~r~hh~~~~~~~k  139 (510)
                      |..|+..-. +++    .-.|..|...|.....|.+|++.+.+-.+-|+    |..-|...+.|..|.|..|-+|+...+
T Consensus       165 l~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~HflCE~~~C  244 (669)
T KOG2231|consen  165 LNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLCEEEFC  244 (669)
T ss_pred             HHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcCcccccccc
Confidence            777766322 122    24699999999999999999998444445563    677888999999999999988887666


Q ss_pred             hhchh
Q 010444          140 VNQGL  144 (510)
Q Consensus       140 ~~~~l  144 (510)
                      ....+
T Consensus       245 ~~~~f  249 (669)
T KOG2231|consen  245 RTKKF  249 (669)
T ss_pred             cccee
Confidence            55543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.40  E-value=0.0002  Score=55.30  Aligned_cols=52  Identities=19%  Similarity=0.452  Sum_probs=31.3

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      .|.|++|++ .-+...|..|....+           ....+.+.||+|       ...+.  .+|.+|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H-----------~~~~~~v~CPiC-------~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEH-----------RSESKNVVCPIC-------SSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHC-----------cCCCCCccCCCc-------hhhhh--hHHHHHHHHhc
Confidence            477888888 444567888866554           112345777777       34332  36666666554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.38  E-value=0.00023  Score=54.97  Aligned_cols=46  Identities=22%  Similarity=0.438  Sum_probs=21.1

Q ss_pred             cccCcCCccccChhHHHHHHHH-h--CCCceecC-CCCcccChhHHHHHHHHh
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT-C--GTREYKCD-CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt-h--geKpykC~-Cgk~F~~kssL~~H~r~h  130 (510)
                      |.|++|++ ......|..|... |  ..+.+.|+ |...+.  ..|..|++..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            44555555 3333445555544 3  12345555 554333  2455555444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.37  E-value=9.7e-05  Score=46.80  Aligned_cols=23  Identities=43%  Similarity=0.908  Sum_probs=21.8

Q ss_pred             ccccccCcccCChHHHHHHHHhc
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      |+|++|++.|.++..|+.|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            79999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.32  E-value=0.00014  Score=60.78  Aligned_cols=45  Identities=27%  Similarity=0.456  Sum_probs=32.9

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhh-ccCCcccccCcCCccccChhHHHHHHHH
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSR-KHGEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~-H~geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ||.|+.|       ++.|.....|++|++. |.   ++.|++|++.|.   .|..|.++
T Consensus         1 py~C~~C-------gk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPIC-------GFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCC-------CCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            4678887       7888888888888774 43   357888888887   46777765

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.11  E-value=0.00033  Score=58.88  Aligned_cols=72  Identities=18%  Similarity=0.480  Sum_probs=19.5

Q ss_pred             cccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444            7 VCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus         7 ~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +|.+|+..|.....|..|++..+             .   +..+.        ...+.....+..+.+.. -...|.|.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H-------------~---~~~~~--------~~~l~~~~~~~~~~~~~-~~~~~~C~~   55 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKH-------------G---FDIPD--------QKYLVDPNRLLNYLRKK-VKESFRCPY   55 (100)
T ss_dssp             -------------------------------------------------------------------------SSEEBSS
T ss_pred             Ccccccccccccccccccccccc-------------c---ccccc--------ccccccccccccccccc-cCCCCCCCc
Confidence            59999999999999999987654             0   01111        11222333333343322 123688888


Q ss_pred             CCccccChhHHHHHHHH
Q 010444           87 CSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        87 CgK~F~~ks~Lk~H~rt  103 (510)
                      |++.|.....|+.|++.
T Consensus        56 C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   56 CNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SS-EESSHHHHHHHHHH
T ss_pred             cCCCCcCHHHHHHHHcC
Confidence            88888888888888887

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.92  E-value=0.00057  Score=42.83  Aligned_cols=24  Identities=42%  Similarity=0.901  Sum_probs=20.5

Q ss_pred             ccccccCcccCChHHHHHHHHhcC
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+|++|++.|.+...|+.|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999874

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.88  E-value=0.00063  Score=43.01  Aligned_cols=22  Identities=32%  Similarity=0.783  Sum_probs=11.5

Q ss_pred             cccCcCCccccChhHHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |+|++|++.|..+..|+.|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.77  E-value=0.00077  Score=44.28  Aligned_cols=25  Identities=36%  Similarity=0.711  Sum_probs=23.6

Q ss_pred             cccccccCcccCChHHHHHHHHhcC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||+|.+|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6999999999999999999999885

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.38  E-value=0.0024  Score=53.62  Aligned_cols=74  Identities=15%  Similarity=0.241  Sum_probs=22.1

Q ss_pred             eCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHhCCCceecC-CCCcccChhHHHHH
Q 010444           48 ICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFITH  126 (510)
Q Consensus        48 ~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL~~H  126 (510)
                      .|..|       +..|.+...|..|+...++...-    ..+.+.....+..+.+..-...+.|. |++.|.....|..|
T Consensus         1 ~C~~C-------~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFC-------DESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Ccccc-------ccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHH
Confidence            47887       88999999999999876653211    11222233444444444223479999 99999999999999


Q ss_pred             HHHhcc
Q 010444          127 RAFCDA  132 (510)
Q Consensus       127 ~r~hh~  132 (510)
                      ++.+..
T Consensus        70 m~~~~H   75 (100)
T PF12756_consen   70 MRSKHH   75 (100)
T ss_dssp             HHHTTT
T ss_pred             HcCccC
Confidence            997643

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.19  E-value=0.0041  Score=38.85  Aligned_cols=22  Identities=27%  Similarity=0.771  Sum_probs=11.6

Q ss_pred             cccCcCCccccChhHHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |.|++|++.|..+..|+.|+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            4556666666666666655554

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.00  E-value=0.005  Score=38.81  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=22.3

Q ss_pred             ccccccCcccCChHHHHHHHHhcC
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            789999999999999999999774

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.98  E-value=0.0051  Score=63.77  Aligned_cols=111  Identities=14%  Similarity=0.222  Sum_probs=74.0

Q ss_pred             cccccc--cCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccC------ChhHHHhHhhhc
Q 010444            5 RFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALG------DLTGIKKHFSRK   76 (510)
Q Consensus         5 py~C~~--CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~------~~s~Lk~H~r~H   76 (510)
                      .|.|+.  |.........|+.|.+..+               ..+.|.+|-    ...+.|.      ++..|..|...=
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H---------------~~~~C~~C~----~nKk~F~~E~~lF~~~~Lr~H~~~G  211 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQH---------------GFVLCSECI----GNKKDFWNEIRLFRSSTLRDHKNGG  211 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhc---------------CcEEhHhhh----cCcccCccceeeeecccccccccCC
Confidence            477874  7777666888999988764               234555551    1123332      345566665433


Q ss_pred             cCCcc----cccCcCCccccChhHHHHHHHHhCCCceecC-----CCCcccChhHHHHHHHHhcccc
Q 010444           77 HGEKK----WKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-----CGTIFSRRDSFITHRAFCDALA  134 (510)
Q Consensus        77 ~geKp----~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-----Cgk~F~~kssL~~H~r~hh~~~  134 (510)
                      ..+.-    -.|..|.+.|..-+.|.+|+|.-.|+-|.|+     -.+-|+...+|..|.+.-|-.+
T Consensus       212 ~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~c  278 (493)
T COG5236         212 LEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCC  278 (493)
T ss_pred             ccccCcCCCchhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCceEE
Confidence            32322    2599999999999999999998557778886     2355888899999988655444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.74  E-value=0.0045  Score=40.61  Aligned_cols=22  Identities=32%  Similarity=0.788  Sum_probs=10.9

Q ss_pred             eecC-CCCcccChhHHHHHHHHh
Q 010444          109 YKCD-CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus       109 ykC~-Cgk~F~~kssL~~H~r~h  130 (510)
                      |.|+ |++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            4454 555555555555554443

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.73  E-value=0.014  Score=69.43  Aligned_cols=24  Identities=13%  Similarity=0.372  Sum_probs=18.7

Q ss_pred             eecC-CCCcccChhHHHHHHHHhcc
Q 010444          109 YKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus       109 ykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      +.|+ |.+.-.-...|+.|+.--+.
T Consensus       590 ~~C~vc~yetniarnlrihmtss~~  614 (1406)
T KOG1146|consen  590 WRCEVCSYETNIARNLRIHMTASPS  614 (1406)
T ss_pred             cchhhhcchhhhhhccccccccCCC
Confidence            7888 98888888888888865443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.55  E-value=0.0088  Score=45.88  Aligned_cols=31  Identities=13%  Similarity=0.233  Sum_probs=20.7

Q ss_pred             CCcccccCcCCccccChhHHHHHHHH-hCCCc
Q 010444           78 GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTRE  108 (510)
Q Consensus        78 geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKp  108 (510)
                      .+.|-.|++|+..+.+..+|++|+.+ |+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            56788888888888888888888887 77765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.11  E-value=0.0044  Score=63.81  Aligned_cols=107  Identities=19%  Similarity=0.244  Sum_probs=69.2

Q ss_pred             CcccccccCcccCChHHHHHHHH--hcCCCccccccccccccc--ceeeCC--CCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRR--GHNLPWKLRQRTTTEVRK--RVYICP--EPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r--~H~~p~k~~~~~~~~~~e--kpy~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      .++.|..|...|.+...|.+|.+  .|.             .+  +++.|+  .|       .+.|.....+.+|...|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-------------~~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-------------GESLKPFSCPYSLC-------GKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-------------cccCCceeeeccCC-------CccccccccccCCccccc
Confidence            36788888888888888888888  565             56  788888  56       788888888888888888


Q ss_pred             CCcccccCc--CCccccChhHH----HHHHHH--hCCCceecC---CCCcccChhHHHHHHHHh
Q 010444           78 GEKKWKCDK--CSKKYAVQSDW----KAHQKT--CGTREYKCD---CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus        78 geKp~~C~~--CgK~F~~ks~L----k~H~rt--hgeKpykC~---Cgk~F~~kssL~~H~r~h  130 (510)
                      ..++++|..  |.+.+.....-    ..+.+.  +..+.+.|.   |-..+.+...+..|...+
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (467)
T COG5048         348 SISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITH  411 (467)
T ss_pred             CCCccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccc
Confidence            777776644  55544444331    111111  344555554   656666665555555444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.89  E-value=0.014  Score=37.45  Aligned_cols=23  Identities=43%  Similarity=0.980  Sum_probs=21.5

Q ss_pred             ccccccCcccCChHHHHHHHHhc
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      |.|++|++.|.....|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999865

>PRK04860 hypothetical protein; Provisional

Probab=94.85  E-value=0.014  Score=55.16  Aligned_cols=36  Identities=25%  Similarity=0.761  Sum_probs=23.8

Q ss_pred             ccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccCh
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRR  120 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~k  120 (510)
                      +|.|. |++   ....+++|.++| ++++|+|. |++.|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            56776 766   555667777774 66777776 77766554

>smart00355 ZnF_C2H2 zinc finger

Probab=94.65  E-value=0.028  Score=35.29  Aligned_cols=22  Identities=32%  Similarity=0.788  Sum_probs=12.7

Q ss_pred             cccCcCCccccChhHHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |+|..|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            3555666666666666655554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.95  E-value=0.039  Score=42.40  Aligned_cols=27  Identities=22%  Similarity=0.436  Sum_probs=20.3

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +.|-.|++|+..+.+..+|++|+..++
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHh
Confidence            568899999999999999999998776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=93.87  E-value=0.033  Score=52.69  Aligned_cols=41  Identities=17%  Similarity=0.465  Sum_probs=34.8

Q ss_pred             cceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChh
Q 010444           44 KRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQS   95 (510)
Q Consensus        44 ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks   95 (510)
                      .-+|.|. |       .+   ....+++|.++|+++++|+|..|++.|....
T Consensus       117 ~~~Y~C~-C-------~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        117 TFPYRCK-C-------QE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEEcC-C-------CC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            3579997 7       54   6678899999999999999999999987654

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=93.81  E-value=0.081  Score=55.12  Aligned_cols=115  Identities=19%  Similarity=0.266  Sum_probs=65.8

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc-------
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH-------   77 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~-------   77 (510)
                      ++.|-+|.|.|+.+..|+.|||.-.-   .+.-...+.-.+.|.-..-        ..-++......|.++.+       
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~H---rrinPknreYDkfyiINY~--------ev~ks~t~~~~e~dret~~d~~E~  263 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRH---RRINPKNREYDKFYIINYL--------EVGKSWTIVHSEDDRETNEDINET  263 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccC---cccCCCccccceEEEEeHh--------hcCCccchhhhhhhhhhhcccccc
Confidence            68999999999999999999986420   0000011112233333221        11111111222221111       


Q ss_pred             ----------CCcc--cccCcCCccccChhHHHHHHHH-hCC---------------------------CceecC-CCCc
Q 010444           78 ----------GEKK--WKCDKCSKKYAVQSDWKAHQKT-CGT---------------------------REYKCD-CGTI  116 (510)
Q Consensus        78 ----------geKp--~~C~~CgK~F~~ks~Lk~H~rt-hge---------------------------KpykC~-Cgk~  116 (510)
                                +..+  .+|-.|.+.+.....|..||++ |.-                           +.-.|. |...
T Consensus       264 D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~  343 (423)
T KOG2482|consen  264 DDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLS  343 (423)
T ss_pred             ccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhcccccccccc
Confidence                      1122  4899999999999999999997 521                           112244 7778


Q ss_pred             ccChhHHHHHHHHh
Q 010444          117 FSRRDSFITHRAFC  130 (510)
Q Consensus       117 F~~kssL~~H~r~h  130 (510)
                      |.....|..|+.-+
T Consensus       344 F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  344 FWKEPGLLIHMVED  357 (423)
T ss_pred             ccCcchhhhhcccc
Confidence            88888888887543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.56  E-value=0.021  Score=58.82  Aligned_cols=117  Identities=20%  Similarity=0.273  Sum_probs=65.4

Q ss_pred             CC--Cccccc--ccCcccCChHHHHHHHHhcCCCcccc----------------------cccccccccceeeCCCCCCC
Q 010444            2 AT--NRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLR----------------------QRTTTEVRKRVYICPEPSCV   55 (510)
Q Consensus         2 ge--kpy~C~--~CgK~F~~~s~Lk~H~r~H~~p~k~~----------------------~~~~~~~~ekpy~C~~C~C~   55 (510)
                      ++  +++.|+  .|++.|.+...|+.|...|.......                      .........+.+.|..-.| 
T Consensus       316 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  394 (467)
T COG5048         316 GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSC-  394 (467)
T ss_pred             cccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCccchhhccCccCCccccccccch-
Confidence            45  899999  79999999999999999997211000                      0000011223333433333 


Q ss_pred             CCCCCCccCChhHHHhHhhhccCCc--ccccCcCCccccChhHHHHHHHHh-CCCceecCCCCcccChhHH
Q 010444           56 HHNPARALGDLTGIKKHFSRKHGEK--KWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCDCGTIFSRRDSF  123 (510)
Q Consensus        56 ~~~~~k~F~~~s~Lk~H~r~H~geK--p~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~Cgk~F~~kssL  123 (510)
                          .+.+.....+..|...|...+  .+.|..|.+.|.....+..|++.+ ...++.|.|-+.|.....+
T Consensus       395 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (467)
T COG5048         395 ----IRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDL  461 (467)
T ss_pred             ----hhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCceeeccccccchhhhh
Confidence                455555555566655555544  344455666666666666666664 3333333344444443333

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=93.32  E-value=0.85  Score=51.90  Aligned_cols=69  Identities=17%  Similarity=0.182  Sum_probs=47.5

Q ss_pred             CChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCC------c
Q 010444           16 QRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCS------K   89 (510)
Q Consensus        16 ~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~Cg------K   89 (510)
                      .+...|.+|++.-..      ....+.+  .-.|..|       ...|-+...|.+|++.++    |.|.+|.      .
T Consensus       160 Yt~~el~~h~~~gd~------d~~s~rG--hp~C~~C-------~~~fld~~el~rH~~~~h----~~chfC~~~~~~ne  220 (669)
T KOG2231|consen  160 YTRAELNLHLMFGDP------DDESCRG--HPLCKFC-------HERFLDDDELYRHLRFDH----EFCHFCDYKTGQNE  220 (669)
T ss_pred             ehHHHHHHHHhcCCC------ccccccC--Cccchhh-------hhhhccHHHHHHhhccce----eheeecCcccccch
Confidence            344567777765430      0011111  2367887       899999999999999876    6777774      4


Q ss_pred             cccChhHHHHHHHH
Q 010444           90 KYAVQSDWKAHQKT  103 (510)
Q Consensus        90 ~F~~ks~Lk~H~rt  103 (510)
                      .|....+|..|.|.
T Consensus       221 yy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  221 YYNDYDDLEEHFRK  234 (669)
T ss_pred             hcccchHHHHHhhh
Confidence            58888999999987

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.55  E-value=0.071  Score=34.02  Aligned_cols=23  Identities=26%  Similarity=0.600  Sum_probs=19.0

Q ss_pred             ccccccCcccCChHHHHHHHHhcC
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+|+.|..... +..|++|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            79999999998 899999999874

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.50  E-value=0.036  Score=36.60  Aligned_cols=24  Identities=29%  Similarity=0.787  Sum_probs=21.1

Q ss_pred             cccccccCcccCChHHHHHHHHhc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      .|.|..|++.|.....|+.|++..
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccC
Confidence            488999999999999999998754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.16  E-value=0.07  Score=34.18  Aligned_cols=21  Identities=24%  Similarity=0.770  Sum_probs=11.6

Q ss_pred             cccCcCCccccChhHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQK  102 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~r  102 (510)
                      |.|++|++.|.....|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=91.81  E-value=0.071  Score=63.70  Aligned_cols=31  Identities=16%  Similarity=0.301  Sum_probs=26.0

Q ss_pred             hCCCceecC-CCCcccChhHHHHHHHHhcccc
Q 010444          104 CGTREYKCD-CGTIFSRRDSFITHRAFCDALA  134 (510)
Q Consensus       104 hgeKpykC~-Cgk~F~~kssL~~H~r~hh~~~  134 (510)
                      ++.+||.|. |...+..+..|..|++.+-...
T Consensus       514 ~~~~p~~C~~C~~stttng~LsihlqS~~h~~  545 (1406)
T KOG1146|consen  514 CPGKPYPCRACNYSTTTNGNLSIHLQSDLHRN  545 (1406)
T ss_pred             CCCCcccceeeeeeeecchHHHHHHHHHhhHH
Confidence            456889999 9999999999999998765443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=90.80  E-value=0.2  Score=31.85  Aligned_cols=21  Identities=38%  Similarity=0.711  Sum_probs=10.1

Q ss_pred             cccCcCCccccChhHHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |+|+.|..... +..|++|+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            45555555554 5555555554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.42  E-value=0.71  Score=48.42  Aligned_cols=73  Identities=19%  Similarity=0.407  Sum_probs=54.0

Q ss_pred             eeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCc-------cccChhHHHHHHHHhCCCceecC---CC--
Q 010444           47 YICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSK-------KYAVQSDWKAHQKTCGTREYKCD---CG--  114 (510)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK-------~F~~ks~Lk~H~rthgeKpykC~---Cg--  114 (510)
                      -.|..|       ...|-+...|.+|+|..|.    +|-+|++       .|+.-..|.+|.+.   .-|.|.   |-  
T Consensus       221 P~C~FC-------~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~---~hy~ct~qtc~~~  286 (493)
T COG5236         221 PLCIFC-------KIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRN---AHYCCTFQTCRVG  286 (493)
T ss_pred             chhhhc-------cceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhc---CceEEEEEEEecC
Confidence            368888       8999999999999997662    4666655       37788888888775   236674   53  


Q ss_pred             --CcccChhHHHHHHHHhccc
Q 010444          115 --TIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus       115 --k~F~~kssL~~H~r~hh~~  133 (510)
                        ..|.....|..|+..-|+.
T Consensus       287 k~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         287 KCYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             cEEEeccHHHHHHHHHHHhhc
Confidence              5688888999998766543

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=89.27  E-value=0.57  Score=49.66  Aligned_cols=118  Identities=20%  Similarity=0.347  Sum_probs=82.6

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccc------------------------cccccccccceeeCCCCCCCCCCCC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLR------------------------QRTTTEVRKRVYICPEPSCVHHNPA   60 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~------------------------~~~~~~~~ekpy~C~~C~C~~~~~~   60 (510)
                      -|+|.-|...|.....-+.|.++-.-.++++                        .....+..+-++.|.+|       .
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c-------~   75 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEAC-------N   75 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHh-------h
Confidence            4899999999999988888987653222211                        11112456778999999       7


Q ss_pred             CccCChhHHHhHhhhcc---------------------------------C-----------------------------
Q 010444           61 RALGDLTGIKKHFSRKH---------------------------------G-----------------------------   78 (510)
Q Consensus        61 k~F~~~s~Lk~H~r~H~---------------------------------g-----------------------------   78 (510)
                      |.|........|+....                                 +                             
T Consensus        76 k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~  155 (390)
T KOG2785|consen   76 KSFASPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIE  155 (390)
T ss_pred             ccccChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhh
Confidence            88887666666654210                                 0                             


Q ss_pred             --------CcccccCcCCccccChhHHHHHHHH-hCC-----------------------CceecC-CC---CcccChhH
Q 010444           79 --------EKKWKCDKCSKKYAVQSDWKAHQKT-CGT-----------------------REYKCD-CG---TIFSRRDS  122 (510)
Q Consensus        79 --------eKp~~C~~CgK~F~~ks~Lk~H~rt-hge-----------------------KpykC~-Cg---k~F~~kss  122 (510)
                              .-|-.|-.|.+.+..-..-..||.. |+-                       +-|.|- |.   +.|..-..
T Consensus       156 ~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~slea  235 (390)
T KOG2785|consen  156 EDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEA  235 (390)
T ss_pred             hccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHH
Confidence                    0124588899999998888889987 542                       226787 87   88999999


Q ss_pred             HHHHHHH
Q 010444          123 FITHRAF  129 (510)
Q Consensus       123 L~~H~r~  129 (510)
                      .+.||+.
T Consensus       236 vr~HM~~  242 (390)
T KOG2785|consen  236 VRAHMRD  242 (390)
T ss_pred             HHHHHhh
Confidence            9999864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=88.86  E-value=0.11  Score=34.25  Aligned_cols=21  Identities=33%  Similarity=0.787  Sum_probs=10.9

Q ss_pred             cccCcCCccccChhHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQK  102 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~r  102 (510)
                      |.|..|++.|.....|+.|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.76  E-value=0.3  Score=33.62  Aligned_cols=24  Identities=29%  Similarity=0.796  Sum_probs=21.8

Q ss_pred             cccccccCcccCChHHHHHHHHhc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      +|.|++|++.|.....+..|++..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            689999999999999999998754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=84.59  E-value=0.47  Score=46.49  Aligned_cols=82  Identities=21%  Similarity=0.451  Sum_probs=65.4

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-h----------CCCceec
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-C----------GTREYKC  111 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-h----------geKpykC  111 (510)
                      ..+.|.|++-+|     .+.|........|+.+-|+   -.|.+|.+.|....-|..|+.- |          |..-|.|
T Consensus        76 ~~~~~~cqvagc-----~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~C  147 (253)
T KOG4173|consen   76 RVPAFACQVAGC-----CQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQC  147 (253)
T ss_pred             ccccccccccch-----HHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHH
Confidence            446788998877     7888888888888765554   3799999999999999999864 3          3345999


Q ss_pred             C---CCCcccChhHHHHHHHHhcc
Q 010444          112 D---CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus       112 ~---Cgk~F~~kssL~~H~r~hh~  132 (510)
                      -   |+..|.+...-+.|+-..|.
T Consensus       148 lvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHHHhcc
Confidence            5   99999999999999865553

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=84.40  E-value=0.85  Score=29.85  Aligned_cols=21  Identities=29%  Similarity=0.680  Sum_probs=17.6

Q ss_pred             ccccccCcccCChHHHHHHHHh
Q 010444            6 FVCEICNKGFQRDQNLQLHRRG   27 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~   27 (510)
                      .+|++|++.| ....|.+|++.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5899999999 56779999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=84.20  E-value=0.81  Score=29.96  Aligned_cols=19  Identities=26%  Similarity=0.698  Sum_probs=9.8

Q ss_pred             ccCcCCccccChhHHHHHHH
Q 010444           83 KCDKCSKKYAVQSDWKAHQK  102 (510)
Q Consensus        83 ~C~~CgK~F~~ks~Lk~H~r  102 (510)
                      .|+.|++.| ..+.|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4445555544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=83.45  E-value=0.76  Score=31.56  Aligned_cols=23  Identities=22%  Similarity=0.462  Sum_probs=15.3

Q ss_pred             ccccCcCCccccChhHHHHHHHH
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      +|.|++|++.|.....++.|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            45677777777766666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=83.18  E-value=0.33  Score=48.50  Aligned_cols=44  Identities=25%  Similarity=0.328  Sum_probs=34.8

Q ss_pred             eCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHH
Q 010444           48 ICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQK  102 (510)
Q Consensus        48 ~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~r  102 (510)
                      -|.+|       ++.|-+...|.+|.+..    .|+|.+|.|+...---|..|.-
T Consensus        12 wcwyc-------nrefddekiliqhqkak----hfkchichkkl~sgpglsihcm   55 (341)
T KOG2893|consen   12 WCWYC-------NREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCM   55 (341)
T ss_pred             eeeec-------ccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehh
Confidence            48887       89999999999887644    4999999998777667766644

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=82.81  E-value=0.81  Score=46.15  Aligned_cols=45  Identities=24%  Similarity=0.651  Sum_probs=33.0

Q ss_pred             cccCcCCccccChhHHHHHHHHhCCCceecC-CCCcccChhHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFITHRA  128 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL~~H~r  128 (510)
                      |.|.+|+...... .+.+|+..|...-|.|- |++.|.+ .+++.|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            6788888776544 56668888655778887 8888888 66777764

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=81.95  E-value=2.6  Score=44.26  Aligned_cols=85  Identities=19%  Similarity=0.362  Sum_probs=60.9

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccC--------------------C--cccccCcCCccccChhHHHHH
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHG--------------------E--KKWKCDKCSKKYAVQSDWKAH  100 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g--------------------e--Kp~~C~~CgK~F~~ks~Lk~H  100 (510)
                      .....+|-.|.      ......++.+..|+-..|+                    +  ..+.|-+|.|.|..+..|+.|
T Consensus       141 t~fslqClFCn------~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeH  214 (423)
T KOG2482|consen  141 TIFSLQCLFCN------NEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEH  214 (423)
T ss_pred             CeeeeEEEEec------chhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHH
Confidence            34556788883      4455567777777553331                    1  247899999999999999999


Q ss_pred             HHH--hCC-----------------------------------------------------Cc--eecC-CCCcccChhH
Q 010444          101 QKT--CGT-----------------------------------------------------RE--YKCD-CGTIFSRRDS  122 (510)
Q Consensus       101 ~rt--hge-----------------------------------------------------Kp--ykC~-Cgk~F~~kss  122 (510)
                      ||.  |..                                                     .+  -+|- |...+-....
T Consensus       215 MrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~  294 (423)
T KOG2482|consen  215 MRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVF  294 (423)
T ss_pred             HHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHH
Confidence            984  310                                                     11  3788 9999999999


Q ss_pred             HHHHHHHhccc
Q 010444          123 FITHRAFCDAL  133 (510)
Q Consensus       123 L~~H~r~hh~~  133 (510)
                      |..|++..|..
T Consensus       295 l~eHmk~vHe~  305 (423)
T KOG2482|consen  295 LFEHMKIVHEF  305 (423)
T ss_pred             HHHHHHHHHHh
Confidence            99999877644

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=80.73  E-value=0.63  Score=45.60  Aligned_cols=79  Identities=22%  Similarity=0.399  Sum_probs=61.8

Q ss_pred             CCcccccc--cCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc---
Q 010444            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH---   77 (510)
Q Consensus         3 ekpy~C~~--CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~---   77 (510)
                      .+.|.|.+  |-+.|.....+..|..+-+                -..|.+|       .+.|.+...|..|+..-|   
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h----------------~~sCs~C-------~r~~Pt~hLLd~HI~E~HDs~  133 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLH----------------GNSCSFC-------KRAFPTGHLLDAHILEWHDSL  133 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcc----------------cchhHHH-------HHhCCchhhhhHHHHHHHHHH
Confidence            45688987  8888888777777764432                2479998       899999999999987543   


Q ss_pred             -------CCcccccCc--CCccccChhHHHHHHHH-h
Q 010444           78 -------GEKKWKCDK--CSKKYAVQSDWKAHQKT-C  104 (510)
Q Consensus        78 -------geKp~~C~~--CgK~F~~ks~Lk~H~rt-h  104 (510)
                             |..-|.|-+  |..+|+.....+.|+-. |
T Consensus       134 Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  134 FQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             HHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence                   445699955  99999999999999987 5

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	510
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 24/138 (17%)
Query: 6   FVCEICNKGFQRDQNLQLHRRGH--NLPWK-------------LRQRTTTEVRKRVYICP 50
           + C  C K F   ++L  H+R H    P+K             LR    T   ++ Y CP
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP 109
Query: 51  EPSCVHHNPARALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHQKT-CGTREY 109
           E  C      ++   L  ++ H     GE           ++ + +   HQ+T  G + Y
Sbjct: 110 E--C-----GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162
Query: 110 KC-DCGTIFSRRDSFITH 126
           KC +CG  FSRRD+   H
Sbjct: 163 KCPECGKSFSRRDALNVH 180

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	510
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-05
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	7e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-04

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 26/128 (20%)

Query: 6   FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL 63
           F+C    CNK + +  +LQ+H R H          T E   + Y C    C      R  
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKH----------TGE---KPYQCDFKDC-----ERRF 48

Query: 64  GDLTGIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC---DCGTIFS 118
                +K+H  R+H G K ++C  C +K++     K H +T  G + + C    C   F+
Sbjct: 49  SRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107

Query: 119 RRDSFITH 126
           R D  + H
Sbjct: 108 RSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 11/86 (12%)

Query: 47  YICPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCDK--CSKKYAVQSDWKAHQKT 103
           ++C  P C      +    L+ ++ H SRKH GEK ++CD   C ++++     K HQ+ 
Sbjct: 7   FMCAYPGC-----NKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 104 -CGTREYKCD-CGTIFSRRDSFITHR 127
             G + ++C  C   FSR D   TH 
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHT 86

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 54.5 bits (132), Expect = 8e-09
 Identities = 32/131 (24%), Positives = 42/131 (32%), Gaps = 28/131 (21%)

Query: 6   FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL 63
           F C+   C KGF    +L  H   H          T E   + + C    C         
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTH----------TGE---KNFTCDSDGC-----DLRF 84

Query: 64  GDLTGIKKHFSRKHGEKKW--KCDK--CSKKYAVQSDWKAHQKT-CGTREYKC---DCGT 115
                +KKHF+R H  K     C    C K +   +  K HQ +      Y+C    C  
Sbjct: 85  TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK 144

Query: 116 IFSRRDSFITH 126
            FS       H
Sbjct: 145 RFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 32/134 (23%)

Query: 5   RFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARA 62
           R++C    C   + ++  LQ H   H          T E   + + C E  C      + 
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKH----------TGE---KPFPCKEEGC-----EKG 53

Query: 63  LGDLTGIKKHFSRKH-GEKKWKCD--KCSKKYAVQSDWKAHQKTCGTRE----YKC---D 112
              L  + +H S  H GEK + CD   C  ++  +++ K H            Y C   +
Sbjct: 54  FTSLHHLTRH-SLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKICVYVCHFEN 111

Query: 113 CGTIFSRRDSFITH 126
           CG  F + +    H
Sbjct: 112 CGKAFKKHNQLKVH 125

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 20/126 (15%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
            + C++ F   + L  H           +    E  ++ ++C           R      
Sbjct: 6   WDGCSQEFDSQEQLVHHIN--------SEHIHGE--RKEFVCHW--GGCSRELRPFKAQY 53

Query: 68  GIKKHFSRKH-GEKKWKCD--KCSKKYAVQSDWKAHQKT-CGTREYKC---DCGTIFSRR 120
            +  H  R+H GEK  KC    C K Y+   + K H ++  G + Y C    C   FS  
Sbjct: 54  MLVVHM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112

Query: 121 DSFITH 126
                H
Sbjct: 113 SDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 23/103 (22%)

Query: 6   FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL 63
             C    C K + R +NL+ H R H          T E   + Y+C    C     ++A 
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSH----------TGE---KPYMCEHEGC-----SKAF 109

Query: 64  GDLTGIKKHFSRKH-GEKKWKCDK--CSKKYAVQSDWKAHQKT 103
            + +   KH +R H  EK + C    C+K+Y   S  + H KT
Sbjct: 110 SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 24/124 (19%), Positives = 33/124 (26%), Gaps = 49/124 (39%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
           F C IC + F R  +L  H R H                                     
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH------------------------------------- 26

Query: 66  LTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFI 124
            TG          EK + CD C +K+A   + K H+          D    + S+     
Sbjct: 27  -TG----------EKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLE 75

Query: 125 THRA 128
              A
Sbjct: 76  NEVA 79

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 22/101 (21%)

Query: 6   FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL 63
             C+   C K + +  +L+ H R H          T E   + Y C    C         
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTH----------TGE---KPYKCTWEGC-----DWRF 57

Query: 64  GDLTGIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT 103
                + +H+ RKH G K ++C  C++ ++       H K 
Sbjct: 58  ARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 36  QRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKC--DKCSKKYA 92
                  ++R++ C  P C      +     + +K H  R H GEK +KC  + C  ++A
Sbjct: 5   SSGPDLEKRRIHYCDYPGC-----TKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFA 58

Query: 93  VQSDWKAHQKT-CGTREYKCD-CGTIFSRRDSFITHR 127
              +   H +   G + ++C  C   FSR D    H 
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 48.3 bits (116), Expect = 3e-07
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 42  VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQ 101
           +  R   CP   C      +   D + ++KH    HG +   C +C K +   S  K HQ
Sbjct: 1   MEPRTIACPHKGC-----TKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQ 54

Query: 102 KT-CGTREYKC---DCGTIFSRRDSFITH 126
               G + ++C    CG  FS   +  TH
Sbjct: 55  LVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 9e-06
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 29/126 (23%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
            + C K F+ +  ++ H   H                RV++C E  C      +A  + +
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHG--------------PRVHVCAE--C-----GKAFVESS 48

Query: 68  GIKKHFSRKH-GEKKWKC--DKCSKKYAVQSDWKAHQKT-CGTREYKC---DCGTIFSRR 120
            +K+H    H GEK ++C  + C K++++  + + H +   G R Y C    C   F++ 
Sbjct: 49  KLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 107

Query: 121 DSFITH 126
            +  +H
Sbjct: 108 TNLKSH 113

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKTC---GTREYKC-DCGTIFSRRDSFITHR 127
               GE  ++C  CS+ Y   S++  H  T      + Y C  C   F+R+D+   H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 12/98 (12%), Positives = 23/98 (23%), Gaps = 46/98 (46%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
           + C++C++ +    N   H                               H         
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTS---------------------------HK-------- 35

Query: 66  LTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT 103
                         K + C  C K++  + +  AH K 
Sbjct: 36  -----------RNVKVYPCPFCFKEFTRKDNMTAHVKI 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSRRDSFITHRA 128
                    KC +CS   + ++  + H++  C  R +KC+ C     +  +   H  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.6 bits (117), Expect = 7e-07
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 44/135 (32%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
           + C  C K F   ++L  H+R H          T E   + Y CPE  C           
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTH----------TGE---KPYKCPE--C----------- 83

Query: 66  LTGIKKHFSRK-----H-----GEKKWKCDKCSKKYAVQSDWKAHQKTCGTRE--YKC-D 112
                K FS++     H     GEK + C +C K ++  +  +AHQ+T  T E  YKC +
Sbjct: 84  ----GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTGEKPYKCPE 138

Query: 113 CGTIFSRRDSFITHR 127
           CG  FSR D+  TH+
Sbjct: 139 CGKSFSREDNLHTHQ 153

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 42/133 (31%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
           + C  C K F +  NL+ H+R H          T E   + Y CPE  C           
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTH----------TGE---KPYACPE--C----------- 111

Query: 66  LTGIKKHFSRK---------H-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DC 113
             G  K FS+          H GEK +KC +C K ++ + +   HQ+T  G + YKC +C
Sbjct: 112 --G--KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC 167

Query: 114 GTIFSRRDSFITH 126
           G  FSRRD+   H
Sbjct: 168 GKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 26/125 (20%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
           + C  C K F R  +L  H+R H          T E   + Y CPE  C      ++  D
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTH----------TGE---KPYKCPE--C-----GKSFSD 61

Query: 66  LTGIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKTCGTRE--YKC-DCGTIFSRRD 121
              + +H  R H GEK +KC +C K ++ +++ +AHQ+T  T E  Y C +CG  FS+  
Sbjct: 62  KKDLTRH-QRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTGEKPYACPECGKSFSQLA 119

Query: 122 SFITH 126
               H
Sbjct: 120 HLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 40.1 bits (95), Expect = 5e-04
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITHR 127
               GEK + C +C K ++       HQ+T  G + YKC +CG  FS +     H+
Sbjct: 14  ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ 69

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 47  YICPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-C 104
           Y CP  SC      R       + +H  R H G+K ++C  C + ++       H +T  
Sbjct: 5   YACPVESC-----DRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

Query: 105 GTREYKCD-CGTIFSRRDSFITHR 127
           G + + CD CG  F+R D    H 
Sbjct: 59  GEKPFACDICGRKFARSDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 24/101 (23%)

Query: 6   FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL 63
           + C +  C++ F +  +L  H R H          T +   + + C    C      R  
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIH----------TGQ---KPFQCRI--C-----MRNF 44

Query: 64  GDLTGIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT 103
                +  H  R H GEK + CD C +K+A   + K H K 
Sbjct: 45  SRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 20/96 (20%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
            E C K F++   L++H+  H          T +     Y CP   C      +     +
Sbjct: 6   FENCGKAFKKHNQLKVHQFSH----------TQQ---LPYECPHEGC-----DKRFSLPS 47

Query: 68  GIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQK 102
            +K+H  + H G    K D CS      + +  H  
Sbjct: 48  RLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 46  VYICPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCD--KCSKKYAVQSDWKAHQK 102
           +Y+C   +C      +A      +K H    H  +  ++C    C K++++ S  K H+K
Sbjct: 1   MYVCHFENC-----GKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 54

Query: 103 T-CGTREYKCD-CGTIFSRRDSFITHR 127
              G    K D C  +      ++ H 
Sbjct: 55  VHAGYPCKKDDSCSFVGKTWTLYLKHV 81

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 70  KKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT---CGTREYKCD-CGTIFSRRDSFI 124
                R H GEK ++C  C  ++      K H          ++ C  C T+ +R+    
Sbjct: 4   GSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 125 TH 126
            H
Sbjct: 63  VH 64

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 45/136 (33%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
             C  C+K F     L++H R H          T E   + + CP+  C           
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKH----------TGE---KPFECPK--C----------- 41

Query: 66  LTGIKKHFSRK-----H--------GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC 111
             G  K + RK     H         E+ + C  C + +  + + + H  +  G   YKC
Sbjct: 42  --G--KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC 97

Query: 112 -DCGTIFSRRDSFITH 126
             C   F ++    +H
Sbjct: 98  SSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 78  GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITH 126
           G    +C  C KK+  +   K H +   G + ++C  CG  + R+++ + H
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
              C K + +  +L+ H R H          T E   + Y C    C             
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTH----------TGE---KPYHCDWDGC-----GWKFARSD 51

Query: 68  GIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT 103
            + +H+ RKH G + ++C KC + ++       H K 
Sbjct: 52  ELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 75  RKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD---CGTIFSRRDSFITHR 127
           ++          C K Y   S  KAH +T  G + Y CD   CG  F+R D    H 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 11/90 (12%)

Query: 43  RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCDK--CSKKYAVQSDWKA 99
           R   + C    C      +     + +K H  R H GEK + CD   C  K+A   +   
Sbjct: 2   RTATHTCDYAGC-----GKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTR 55

Query: 100 HQKT-CGTREYKCD-CGTIFSRRDSFITHR 127
           H +   G R ++C  C   FSR D    H 
Sbjct: 56  HYRKHTGHRPFQCQKCDRAFSRSDHLALHM 85

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITH 126
            +    +++KCD+C K ++  SD   H++T  G + YKC +CG  F +R   I H
Sbjct: 11  WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITHR 127
                +K +KCD+C   +  + +  +H+    G + Y+C  CG  F+R  +  TH 
Sbjct: 10  HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 23/130 (17%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVR-KRVYICPEPSCVHHNPA-RAL 63
              + C++ F     L  H                    +  ++C    C     + +A 
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTME----------HVGGPEQNNHVCYWEECPREGKSFKAK 75

Query: 64  GDLTGIKKHFSRKH-GEKKWKCDK--CSKKYAVQSDWKAHQKT-CGTREYKC---DCGTI 116
             L     H  R H GEK + C    C K +A   + K H++T  G + +KC    C   
Sbjct: 76  YKL---VNH-IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRR 131

Query: 117 FSRRDSFITH 126
           F+       H
Sbjct: 132 FANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 23/109 (21%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
           C    K F+    L  H R H          T E   + + CP P C      +      
Sbjct: 65  CPREGKSFKAKYKLVNHIRVH----------TGE---KPFPCPFPGC-----GKIFARSE 106

Query: 68  GIKKHFSRKH-GEKKWKC--DKCSKKYAVQSDWKAHQKT-CGTREYKCD 112
            +K H  R H GEK +KC  + C +++A  SD K H       +     
Sbjct: 107 NLKIH-KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.2 bits (102), Expect = 6e-06
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 78  GEKKWKCDKCSKKYAVQSDWKAHQKT----CGTREYKCD-CGTIFSRRDSFITHR 127
           G    +C+ C      ++    HQ+          + C+ CG  F + DS   HR
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 13/98 (13%), Positives = 24/98 (24%), Gaps = 45/98 (45%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
             CEIC    ++  +L  H+R H                                     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKH------------------------------------- 30

Query: 66  LTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT 103
                   +      ++ C+ C K++       AH+  
Sbjct: 31  --------AETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.8 bits (102), Expect = 7e-06
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 68  GIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFI 124
           G     S  H GEK + C +C K ++  S    HQ+   G + YKC +CG  FS+    I
Sbjct: 1   GSSGS-SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 125 THR 127
            H+
Sbjct: 60  NHQ 62

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.2 bits (103), Expect = 9e-06
 Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 12/69 (17%)

Query: 71  KHFSRK---------H-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFS 118
           K FSRK         H G K +KC  C    A  S    H +     R +KC  C     
Sbjct: 16  KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASR 75

Query: 119 RRDSFITHR 127
                  H 
Sbjct: 76  NSSQLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.2 bits (103), Expect = 9e-06
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 78  GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITHR 127
                KC+ C K ++ +   K H +   G + YKC  C    +   S   H 
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 39.3 bits (93), Expect = 2e-04
 Identities = 27/106 (25%), Positives = 36/106 (33%), Gaps = 23/106 (21%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
           CE+C K F R   L+ H R H          T     + Y C    C       A  D +
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCH----------TGV---KPYKCKT--C-----DYAAADSS 50

Query: 68  GIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC 111
            + KH  R H  E+ +KC  C       S    H ++  G      
Sbjct: 51  SLNKH-LRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 2e-05
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 12/69 (17%)

Query: 71  KHFSRK---------H-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFS 118
           +HF++          H  E+ + CD C K +  Q   + H+      + +KC +CG  F 
Sbjct: 25  RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFC 84

Query: 119 RRDSFITHR 127
           +  +   H+
Sbjct: 85  QSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITHR 127
                +K++ C  C + +    +   H++T    R Y C  C   F R+D    HR
Sbjct: 10  LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.0 bits (100), Expect = 2e-05
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITH 126
             H   + + C  C K++  +SD K H     G + +KC  CG  FS+  + ITH
Sbjct: 22  LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 17/99 (17%), Positives = 27/99 (27%), Gaps = 23/99 (23%)

Query: 5   RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALG 64
            + C +CN           H R                 +   +CP  S    +P     
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHERLC---------------RNAAVCPYCSLRFFSPE---- 56

Query: 65  DLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT 103
               +K+    K   KK  C +C + +        HQ  
Sbjct: 57  ----LKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 7/59 (11%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-----CGTREYKC-DCGTIFSRRDSFITH 126
           R H GEK + C  C K +  +     H K           + C  CG  F+RR++   H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 16/67 (23%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 66  LTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFI 124
            +G   H   +   +   C  C  +       K H+  CG R   C  CG     +D   
Sbjct: 2   SSGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVLVKD-LK 59

Query: 125 THRAFCD 131
           TH   C 
Sbjct: 60  THPEVCG 66

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.1 bits (95), Expect = 2e-04
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)

Query: 71  KHFSRK---------H-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFS 118
           K F+ K         H G + + C  C KK+ ++     H K   G + Y+C  C   F 
Sbjct: 17  KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM 76

Query: 119 RRDSFITH 126
            RDSF  H
Sbjct: 77  WRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 38.2 bits (90), Expect = 8e-04
 Identities = 23/127 (18%), Positives = 36/127 (28%), Gaps = 45/127 (35%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLT 67
           C+ C K F        H   H                R Y C    C         G   
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMH----------LGL---RPYGCGV--C---------G--- 44

Query: 68  GIKKHFSRKH----------GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGT 115
              K F  KH          G K ++C+ C+K++  +  +  H+     T+ Y+      
Sbjct: 45  ---KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQ 99

Query: 116 IFSRRDS 122
             +    
Sbjct: 100 NTTEASG 106

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 78  GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITH 126
           G     C+ C K +        H+ +  G + Y C  CG  F R+D    H
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH 54

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 24/126 (19%), Positives = 34/126 (26%), Gaps = 54/126 (42%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGD 65
             CEIC K F+   +L  H+  H+                                    
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHS------------------------------------ 31

Query: 66  LTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTRE----YKC-DCGTIFSRR 120
                       GEK + C  C  ++  +     H ++         Y C  CG  FSR 
Sbjct: 32  ------------GEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYICQSCGKGFSRP 78

Query: 121 DSFITH 126
           D    H
Sbjct: 79  DHLNGH 84

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 83  KCDKCSKKYAVQSDWKAHQKT-CGTREYKC-DCGTIFSRRDSFITH 126
            C+ C++ +A Q   K H ++    + Y C  C   F+RRD  I H
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 67  TGIKKHFSRKHGEKKWKCDK--CSKKYAVQSDWKAHQKT-CGTREYKCD---CGTIFSRR 120
           +G           +   C    C K Y   S  KAH +T  G + + C    C   F+R 
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 121 DSFITHR 127
           D    HR
Sbjct: 63  DELSRHR 69

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCDCG 114
               GEK +KCD C K +  +S    H       +      G
Sbjct: 5   SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCDCG 114
               GEK +KC++C K +   S   +HQ++  G +      G
Sbjct: 5   SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 23/88 (26%)

Query: 6  FVCEI--CNKGFQRDQNLQLHRR-GHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARA 62
            C+   C + F   Q L  H++  H            +   + + CPEP+C      ++
Sbjct: 8  MPCDFPGCGRIFSNRQYLNHHKKYQH----------IHQ---KSFSCPEPAC-----GKS 49

Query: 63 LGDLTGIKKHFSRKH-GEKKWKCDKCSK 89
                +K+H  + H   + + C+    
Sbjct: 50 FNFKKHLKEH-MKLHSDTRDYICEFSGP 76

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 7/58 (12%)

Query: 47  YICPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCDKCSKKYAVQSDWKAHQKT 103
           Y CP  SC      R       + +H  R H G+K ++C  C + ++       H +T
Sbjct: 20  YACPVESC-----DRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 8e-04
 Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 14/116 (12%)

Query: 12  NKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKK 71
           +KG      L+  +R H L  + ++     V+  ++              +      + +
Sbjct: 17  HKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIH------NPQLLDESSY-----LYR 65

Query: 72  HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKC-DCGTIFSRRDSFITH 126
             + K    ++ C  C   ++     K H +        C  C   F+  DS + H
Sbjct: 66  LLASKAI-SQFVCPLCLMPFSSSVSLKQHIRY-TEHTKVCPVCKKEFTSTDSALDH 119

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	510
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.85
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.79
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.79
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.77
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.66
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.64
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.62
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.61
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.47
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.41
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.4
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.39
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.38
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.33
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.32
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.28
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.28
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.24
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.24
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.2
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.18
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.18
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.1
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.1
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.0
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.99
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.93
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.93
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.9
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.9
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.89
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.89
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.89
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.89
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.88
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.84
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.83
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.8
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.76
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.76
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.76
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.75
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.74
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.74
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.73
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.73
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.73
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.73
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.72
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.72
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.71
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.69
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.68
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.68
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.68
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.67
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.66
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.66
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.65
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.65
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.64
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.62
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.58
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.57
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.56
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.54
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.53
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.53
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.52
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.52
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.52
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.51
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.5
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.5
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.5
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.5
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.48
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.48
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.47
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.46
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.45
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.45
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.44
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.44
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.44
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.44
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.44
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.44
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.43
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.42
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.41
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.41
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.4
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.4
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.39
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.37
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.37
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.34
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.33
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.31
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.28
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.25
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.24
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.22
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.15
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.15
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.11
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.08
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.02
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.96
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.95
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.95
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.95
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.94
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.92
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.9
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.89
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.88
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.85
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.84
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.83
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.83
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.81
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.79
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.77
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.76
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.76
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.75
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.72
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.71
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.7
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.86
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.65
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.65
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.61
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.77
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.6
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.59
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.57
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.53
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.48
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.48
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.42
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.42
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.4
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.49
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.31
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.39
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.23
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.14
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.09
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.03
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.99
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	96.86
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.83
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.8
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.8
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.69
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.6
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.85
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.72
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.49
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.22
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	88.96

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.9e-22  Score=172.62  Aligned_cols=112  Identities=21%  Similarity=0.503  Sum_probs=104.8

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhh---cc
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSR---KH   77 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~---H~   77 (510)
                      +++++|+|++|++.|.....|+.|++.|.             .+++|.|++|       ++.|.....|.+|++.   |.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHT-------------GEKPFECPKC-------GKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHS-------------SCCSCBCTTT-------CCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCC-------------CCCCeECCCC-------CchhcCHHHHHHHHhhhhcCC
Confidence            47899999999999999999999999997             7889999999       9999999999999996   57


Q ss_pred             CCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhcc
Q 010444           78 GEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        78 geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      ++++|.|++|++.|..+..|+.|+++| +++||+|+ |++.|.++..|.+|++..|.
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            889999999999999999999999995 89999999 99999999999999986553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=2.6e-22  Score=172.00  Aligned_cols=110  Identities=28%  Similarity=0.678  Sum_probs=104.2

Q ss_pred             CCCCcccccc--cCcccCChHHHHHHHHhcCCCcccccccccccccceeeCC--CCCCCCCCCCCccCChhHHHhHhhhc
Q 010444            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICP--EPSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      +++++|+|++  |++.|.....|+.|++.|.             .+++|.|+  .|       ++.|.....|.+|+++|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h   61 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-------------GEKPYQCDFKDC-------ERRFSRSDQLKRHQRRH   61 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhC-------------CCCCccCCCCCC-------cCccCCHHHHHHHHHHc
Confidence            4789999997  9999999999999999996             78899999  56       99999999999999999


Q ss_pred             cCCcccccCcCCccccChhHHHHHHHH-hCCCceec--C-CCCcccChhHHHHHHHHh
Q 010444           77 HGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKC--D-CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus        77 ~geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC--~-Cgk~F~~kssL~~H~r~h  130 (510)
                      +++++|.|++|++.|..+..|+.|+++ +++++|+|  + |++.|.++..|.+|+++|
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999999999 59999999  7 999999999999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.85  E-value=8.3e-22  Score=183.39  Aligned_cols=118  Identities=30%  Similarity=0.651  Sum_probs=89.4

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      ++++|+|++|++.|.....|+.|++.|+             .+++|.|++|       ++.|.....|..|+++|+++++
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~  105 (190)
T 2i13_A           46 GEKPYKCPECGKSFSDKKDLTRHQRTHT-------------GEKPYKCPEC-------GKSFSQRANLRAHQRTHTGEKP  105 (190)
T ss_dssp             --CCEECTTTCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHHHHHTCCC
T ss_pred             CCCCccCCCcCchhCCHHHHHHHHHhcC-------------CCCCccCccc-------CCccCCHHHHHHHHHhcCCCCC
Confidence            5789999999999999999999999986             5667777776       6777777777777777777777


Q ss_pred             cccCcCCccccChhHHHHHHHH-hCCCceecC-CCCcccChhHHHHHHHHhccccccchh
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSRRDSFITHRAFCDALAEENNK  139 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~F~~kssL~~H~r~hh~~~~~~~k  139 (510)
                      |.|++|++.|.....|..|+++ +++++|+|+ |++.|.++..|..|++.|+...+..+.
T Consensus       106 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A          106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            7777777777777777777777 477777777 777777777777777777655444443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.85  E-value=2.2e-21  Score=180.55  Aligned_cols=118  Identities=29%  Similarity=0.648  Sum_probs=85.8

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      ++++|+|++|++.|.....|..|++.|.             ++++|.|++|       ++.|.....|.+|+++|+++++
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   77 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHT-------------GEKPYKCPEC-------GKSFSDKKDLTRHQRTHTGEKP   77 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC----------------CCEECTTT-------CCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcC-------------CCCCccCCCc-------CchhCCHHHHHHHHHhcCCCCC
Confidence            5778888888888888888888888876             6778888888       8888888888888888888888


Q ss_pred             cccCcCCccccChhHHHHHHHH-hCCCceecC-CCCcccChhHHHHHHHHhccccccchh
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSRRDSFITHRAFCDALAEENNK  139 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~F~~kssL~~H~r~hh~~~~~~~k  139 (510)
                      |.|++|++.|.....|..|+++ +++++|.|+ |++.|.....|..|++.|+...+..+.
T Consensus        78 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  137 (190)
T 2i13_A           78 YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP  137 (190)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred             ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence            8888888888888888888888 488888888 888888888888888888765544443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=2.8e-21  Score=167.30  Aligned_cols=112  Identities=26%  Similarity=0.570  Sum_probs=101.4

Q ss_pred             CCCCccccc--ccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccC
Q 010444            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (510)
Q Consensus         1 ~gekpy~C~--~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g   78 (510)
                      |.+++|+|+  .|++.|.....|+.|+++|              .+++|.|++|       ++.|.....|.+|+++|++
T Consensus         1 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~   59 (124)
T 1ubd_C            1 MEPRTIACPHKGCTKMFRDNSAMRKHLHTH--------------GPRVHVCAEC-------GKAFVESSKLKRHQLVHTG   59 (124)
T ss_dssp             ----CEECCSTTCCCEESSHHHHHHHHGGG--------------SCCCEECTTT-------CCEESSHHHHHHHGGGTSC
T ss_pred             CCCCcccCCCCCCcCccCCHHHHHHHHHHc--------------CCCCeECCCC-------CchhCCHHHHHHHHHHcCC
Confidence            568999999  8999999999999999988              4689999999       9999999999999999999


Q ss_pred             CcccccCc--CCccccChhHHHHHHHH-hCCCceec--C-CCCcccChhHHHHHHHHhccc
Q 010444           79 EKKWKCDK--CSKKYAVQSDWKAHQKT-CGTREYKC--D-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        79 eKp~~C~~--CgK~F~~ks~Lk~H~rt-hgeKpykC--~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      +++|.|.+  |++.|.....|..|+++ +++++|+|  + |++.|.++..|.+|+++|++.
T Consensus        60 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            99999986  99999999999999999 59999999  5 999999999999999999764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=1.1e-21  Score=176.24  Aligned_cols=101  Identities=19%  Similarity=0.389  Sum_probs=94.1

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      ||++|+|++|++.|.....|++|+++|+             ++++|.|++|       ++.|.....|.+|+++|++++|
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~   78 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHS-------------WEKKYPCRYC-------EKVFPLAEYRTKHEIHHTGERR   78 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHH-------------CCSCEECSSS-------SCEESSHHHHHHHHHHHHTCCC
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcC-------------CCCCeeCCcc-------CeecccccchhhhccccCCCcc
Confidence            7899999999999999999999999996             7899999999       9999999999999999999999


Q ss_pred             cccCcCCccccChhHHHHHHHH-hCC------CceecC-CCCcccChhH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT-CGT------REYKCD-CGTIFSRRDS  122 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt-hge------KpykC~-Cgk~F~~kss  122 (510)
                      |.|++|++.|..+..|+.|+++ |++      ++|+|. |++.|.+...
T Consensus        79 ~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A           79 YQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             EEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCH
T ss_pred             ccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhccc
Confidence            9999999999999999999999 665      459999 9999987643

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=2.8e-20  Score=167.27  Aligned_cols=122  Identities=20%  Similarity=0.322  Sum_probs=104.1

Q ss_pred             CCCcccccccCcccCChHHHHHHHHh-cCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRG-HNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~-H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      ++++|+|++|++.|.+...|++|++. |.......     ....+.|.|++|       ++.|.....|.+|+++|++++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~-----~~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   89 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQN-----NHVCYWEECPRE-------GKSFKAKYKLVNHIRVHTGEK   89 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCS-----SCCCCBTTCTTS-------SCCCSSHHHHHHHTHHHHCCC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccC-----CccccccCCCCc-------ccccCCHHHHHHHHHhcCCCC
Confidence            46789999999999999999999998 53110000     001123889998       999999999999999999999


Q ss_pred             ccccCc--CCccccChhHHHHHHHHh-CCCceecC---CCCcccChhHHHHHHHHhccccc
Q 010444           81 KWKCDK--CSKKYAVQSDWKAHQKTC-GTREYKCD---CGTIFSRRDSFITHRAFCDALAE  135 (510)
Q Consensus        81 p~~C~~--CgK~F~~ks~Lk~H~rth-geKpykC~---Cgk~F~~kssL~~H~r~hh~~~~  135 (510)
                      +|+|.+  |++.|.....|+.|+++| ++++|+|+   |++.|.++..|.+|+++|++..+
T Consensus        90 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A           90 PFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             SEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             cccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            999998  999999999999999995 89999998   99999999999999999986544

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.6e-19  Score=161.78  Aligned_cols=124  Identities=21%  Similarity=0.417  Sum_probs=98.2

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~   82 (510)
                      |.+|+|++|++.|.+...|+.|++.++          .+..+++|.|++|.|  ..+++.|.....|.+|+++|+++++|
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h----------~h~~~~~~~C~~c~C--~~c~~~f~~~~~l~~H~~~h~~~~~~   68 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEH----------IHGERKEFVCHWGGC--SRELRPFKAQYMLVVHMRRHTGEKPH   68 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHT----------SSSCSSCCCCCBTTC--TTTTCCCSSHHHHHHHTHHHHCCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhc----------cCCCCcceeCCCCCc--cchhhhhhhHHHHHHHHHhcCCCCCc
Confidence            678999999999999999999998421          123677888887765  22258888888888888888888888


Q ss_pred             ccCc--CCccccChhHHHHHHHHh-CCCceecC---CCCcccChhHHHHHH-HHhccccccch
Q 010444           83 KCDK--CSKKYAVQSDWKAHQKTC-GTREYKCD---CGTIFSRRDSFITHR-AFCDALAEENN  138 (510)
Q Consensus        83 ~C~~--CgK~F~~ks~Lk~H~rth-geKpykC~---Cgk~F~~kssL~~H~-r~hh~~~~~~~  138 (510)
                      +|++  |++.|.....|+.|+++| ++++|+|+   |++.|.++..|.+|+ +.|....+..+
T Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  131 (155)
T 2gli_A           69 KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC  131 (155)
T ss_dssp             CCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC
T ss_pred             cCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC
Confidence            8875  888888888888888884 78888887   888888888888888 66665444433

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.3e-19  Score=162.31  Aligned_cols=113  Identities=27%  Similarity=0.547  Sum_probs=102.2

Q ss_pred             CCCccccccc-----CcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhc
Q 010444            2 ATNRFVCEIC-----NKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus         2 gekpy~C~~C-----gK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      ++++|+|++|     ++.|.....|++|++.|+             ++++|.|++..|     ++.|.....|.+|+++|
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h   92 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT-------------GEKPHKCTFEGC-----RKSYSRLENLKTHLRSH   92 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH-------------CCCCCCCCSTTC-----CCCCSSHHHHHHHHHHT
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcC-------------CCCCccCCCCCC-----CCcccCHHHHHHHHHHc
Confidence            5789998753     499999999999999996             788999986222     99999999999999999


Q ss_pred             cCCcccccCc--CCccccChhHHHHHH-HHh-CCCceecC---CCCcccChhHHHHHHHHhcc
Q 010444           77 HGEKKWKCDK--CSKKYAVQSDWKAHQ-KTC-GTREYKCD---CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        77 ~geKp~~C~~--CgK~F~~ks~Lk~H~-rth-geKpykC~---Cgk~F~~kssL~~H~r~hh~  132 (510)
                      +++++|+|++  |++.|..+..|+.|+ ++| ++++|+|+   |++.|.++..|..|++.|++
T Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           93 TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999998  999999999999999 566 88999995   99999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.77  E-value=4.5e-19  Score=164.89  Aligned_cols=112  Identities=21%  Similarity=0.542  Sum_probs=65.8

Q ss_pred             CCCcccc--cccCcccCChHHHHHHHHhcCCCcccccccccccccceeeC--CCCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444            2 ATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYIC--PEPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus         2 gekpy~C--~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C--~~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      .+++|+|  ++|++.|.....|+.|++.|.             ++++|.|  +.|       ++.|.....|.+|+++|+
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~   68 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHT-------------GEKPFPCKEEGC-------EKGFTSLHHLTRHSLTHT   68 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHH-------------CCCSSCCSSTTC-------CCCCSSHHHHHHHHTTTT
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcC-------------CCCCccCCCCCC-------ChhhCCHHHHHHHHHHcc
Confidence            4678888  678888888888888888886             4445555  444       455555555555555555


Q ss_pred             CCcccccC--cCCccccChhHHHHHHHH-h--CCCceec--C-CCCcccChhHHHHHHHHhccc
Q 010444           78 GEKKWKCD--KCSKKYAVQSDWKAHQKT-C--GTREYKC--D-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        78 geKp~~C~--~CgK~F~~ks~Lk~H~rt-h--geKpykC--~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      ++++|.|+  .|++.|..+..|+.|++. |  ++++|+|  + |++.|.++..|..|++.|+..
T Consensus        69 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  132 (190)
T 1tf6_A           69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ  132 (190)
T ss_dssp             TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSS
T ss_pred             CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCC
Confidence            55555555  455555555555555532 3  3445555  4 555555555555555555433

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.76  E-value=9.2e-19  Score=162.76  Aligned_cols=111  Identities=24%  Similarity=0.475  Sum_probs=103.3

Q ss_pred             CCCcccc--cccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCC--CCCCCCCCCCCccCChhHHHhHh-hhc
Q 010444            2 ATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICP--EPSCVHHNPARALGDLTGIKKHF-SRK   76 (510)
Q Consensus         2 gekpy~C--~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~--~C~C~~~~~~k~F~~~s~Lk~H~-r~H   76 (510)
                      ++++|+|  ++|++.|.....|++|+++|.             ++++|.|+  .|       ++.|.+...|.+|+ +.|
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~~h   98 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------------GEKNFTCDSDGC-------DLRFTTKANMKKHFNRFH   98 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-------------TCCCEECCSSSC-------CCEESCHHHHHHHHHTTS
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHcc-------------CCCceeCCCCCC-------CCccCCHHHHHHHHHHhc
Confidence            5789999  889999999999999999997             78999999  66       99999999999999 666


Q ss_pred             -cCCccccc--CcCCccccChhHHHHHHHHh-CCCceec--C-CCCcccChhHHHHHHHHhcc
Q 010444           77 -HGEKKWKC--DKCSKKYAVQSDWKAHQKTC-GTREYKC--D-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        77 -~geKp~~C--~~CgK~F~~ks~Lk~H~rth-geKpykC--~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                       .++++|+|  ++|++.|.....|+.|+++| +++||+|  + |++.|.++..|.+|+++|++
T Consensus        99 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           99 NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             STTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence             46889999  88999999999999999995 8999999  4 99999999999999999987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=4.1e-18  Score=143.59  Aligned_cols=90  Identities=24%  Similarity=0.528  Sum_probs=79.0

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      .+++|+|++|++.|.....|++|++.|+             .+++|.|++|       ++.|.....|.+|+++|+++++
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   73 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHT-------------DERPYTCDIC-------HKAFRRQDHLRDHRYIHSKEKP   73 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHC-------------CSCCCBCSSS-------CCBCSCHHHHHHHGGGSCCCCT
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcC-------------CCCCcCCCCc-------cchhCCHHHHHHHHHHhCCCCC
Confidence            4678999999999999999999999886             6788999998       8999999999999999999999


Q ss_pred             cccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      |+|.+|++.|.....|..|+++| ++++|.+
T Consensus        74 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             TSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             eECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            99999999999999999999885 7888764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.72  E-value=5e-18  Score=152.21  Aligned_cols=88  Identities=26%  Similarity=0.459  Sum_probs=83.2

Q ss_pred             cccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcc
Q 010444           40 TEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIF  117 (510)
Q Consensus        40 ~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F  117 (510)
                      .+.++++|+|++|       ++.|.....|++|+++|++++||+|++|++.|..+..|..|+++| +++||.|+ |++.|
T Consensus        16 ~h~Gek~y~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           16 IVDGRVYYICIVC-------KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             EETTEEEEEETTT-------CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             ecCCCcCeECCCC-------CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc
Confidence            3458999999999       999999999999999999999999999999999999999999996 99999999 99999


Q ss_pred             cChhHHHHHHHHhcccc
Q 010444          118 SRRDSFITHRAFCDALA  134 (510)
Q Consensus       118 ~~kssL~~H~r~hh~~~  134 (510)
                      .++..|..|++.++...
T Consensus        89 ~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             SSHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHhHHhcCCC
Confidence            99999999999998643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=8.2e-18  Score=139.02  Aligned_cols=87  Identities=26%  Similarity=0.518  Sum_probs=63.7

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      ++++|+|++|++.|.....|+.|++.|+             .+++|.|++|       ++.|.....|.+|+++|+++++
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHT-------------GVKPYKCKTC-------DYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCC-------------CCCSEECSSS-------CCEESSHHHHHHHHHHSCCCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcC-------------CCCCEeCCCC-------CCccCCHHHHHHHHHHhCCCCC
Confidence            4677777777777777777777777775             5667777776       6777777777777777777777


Q ss_pred             cccCcCCccccChhHHHHHHHHh-CCCc
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTC-GTRE  108 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rth-geKp  108 (510)
                      |+|++|++.|.....|..|+++| ++++
T Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           65 FKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            77777777777777777777773 4443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.2e-17  Score=141.67  Aligned_cols=89  Identities=18%  Similarity=0.218  Sum_probs=79.0

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      +++++|+|++|++.|.....|+.|+++|.               ++|.|++|       ++.|.....|++|++ |++++
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---------------~~~~C~~C-------~~~f~~~~~l~~H~~-H~~~~   68 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR---------------NAAVCPYC-------SLRFFSPELKQEHES-KCEYK   68 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHHHHHH---------------HSBCCTTT-------CCCBSSHHHHHHHHH-HCSTG
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHCC---------------CCccCCCC-------CCccCCHHHHHHHHH-cCCCC
Confidence            36889999999999999999999999873               57999998       899999999999995 99999


Q ss_pred             ccccCcCCccccChhHHHHHHH-Hh-CCCceecC
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQK-TC-GTREYKCD  112 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~r-th-geKpykC~  112 (510)
                      +|+|++|++.|..+..|+.|++ +| ++++|.|.
T Consensus        69 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           69 KLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999999998 55 78888875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.4e-17  Score=135.03  Aligned_cols=84  Identities=24%  Similarity=0.502  Sum_probs=65.7

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC--
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE--   79 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge--   79 (510)
                      ++++|+|++|++.|.....|++|++.|+             .+++|.|++|       ++.|.....|.+|++.|+++  
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   63 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSVG   63 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSC-------------SSCSEECSSS-------CCEESCHHHHHHHHHHHCCCCC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcC-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCCC
Confidence            6778888888888888888888888775             6677888887       78888888888888888776  


Q ss_pred             cccccCcCCccccChhHHHHHHHH-hC
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT-CG  105 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt-hg  105 (510)
                      ++|+|++|++.|..+..|+.|++. |.
T Consensus        64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           64 KPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CceECCCccchhCCHHHHHHHHHHhcC
Confidence            778888888888888888888764 53

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=1.8e-17  Score=135.11  Aligned_cols=86  Identities=24%  Similarity=0.536  Sum_probs=61.8

Q ss_pred             CCCccccc--ccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444            2 ATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus         2 gekpy~C~--~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      +++||+|+  .|++.|.....|..|+++|.             .+++|.|++|       ++.|.....|+.|+++|+++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   60 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHT-------------GQKPFQCRIC-------MRNFSRSDHLTTHIRTHTGE   60 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHHHHHCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHcCCC
Confidence            46777776  47777777777777777775             5677777777       77777777777777777777


Q ss_pred             cccccCcCCccccChhHHHHHHHHh-CCC
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC-GTR  107 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth-geK  107 (510)
                      ++|+|++|++.|..+..|..|+++| ++|
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           61 KPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            7777777777777777777777774 443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.9e-17  Score=138.08  Aligned_cols=85  Identities=26%  Similarity=0.593  Sum_probs=72.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCccc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFS  118 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~  118 (510)
                      +.++++|.| .|       ++.|.....|.+|++.|+++++|+|++|++.|.....|+.|+++| ++++|+|+ |++.|.
T Consensus         5 h~~~k~~~C-~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            5 SSGDKLYPC-QC-------GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCEEC-TT-------SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCCEec-cC-------CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            457788888 77       888888888888888888888888988999999888999998884 78889998 999999


Q ss_pred             ChhHHHHHHHHhccc
Q 010444          119 RRDSFITHRAFCDAL  133 (510)
Q Consensus       119 ~kssL~~H~r~hh~~  133 (510)
                      ++..|.+|++.|+..
T Consensus        77 ~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           77 WRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccc
Confidence            999999999888754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=4.8e-17  Score=130.06  Aligned_cols=80  Identities=31%  Similarity=0.574  Sum_probs=53.0

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccccc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C   84 (510)
                      ||+|++|++.|.....|..|++.|.             .+++|.|++|       ++.|.....|.+|+++|+++++|+|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-------------DTRPYPCQYC-------GKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-------------TCCCEECSSS-------CCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-------------CCCCeeCCcC-------ChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            4666667777766666666666664             5566666666       6666666666666666666666666


Q ss_pred             CcCCccccChhHHHHHHHHh
Q 010444           85 DKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        85 ~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ++|++.|..+..|+.|+++|
T Consensus        61 ~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A           61 QVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             TTTSCEESSHHHHHHHHHHH
T ss_pred             CCcchhhCChHHHHHHHHhh
Confidence            66666666666666666654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=9.7e-17  Score=132.54  Aligned_cols=86  Identities=19%  Similarity=0.308  Sum_probs=81.2

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSR  119 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~  119 (510)
                      ..+++|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|.....|..|+++| ++++|+|+ |++.|.+
T Consensus         4 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   76 (96)
T 2dmd_A            4 GSSGPHKCEVC-------GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN   76 (96)
T ss_dssp             CCCCCCCBTTT-------TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESS
T ss_pred             CCCcCeECCCC-------CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCC
Confidence            36889999999       999999999999999999999999999999999999999999995 89999999 9999999


Q ss_pred             hhHHHHHHHHhcccc
Q 010444          120 RDSFITHRAFCDALA  134 (510)
Q Consensus       120 kssL~~H~r~hh~~~  134 (510)
                      +..|..|++.|++..
T Consensus        77 ~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           77 SSQLTVHLRSHTGDS   91 (96)
T ss_dssp             HHHHHHHHTTCCSCC
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999999987653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.65  E-value=1.8e-16  Score=126.71  Aligned_cols=79  Identities=24%  Similarity=0.525  Sum_probs=76.2

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-hCCCceecC-CCCcccChhHH
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSRRDSF  123 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~F~~kssL  123 (510)
                      ||.|++|       ++.|.....|.+|+++|+++++|+|++|++.|..+..|..|+++ +++++|+|+ |++.|.++..|
T Consensus         1 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKIC-------GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSS-------CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCCC-------cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            5899998       99999999999999999999999999999999999999999999 599999999 99999999999


Q ss_pred             HHHHHHhc
Q 010444          124 ITHRAFCD  131 (510)
Q Consensus       124 ~~H~r~hh  131 (510)
                      .+|+++|+
T Consensus        74 ~~H~~~H~   81 (82)
T 2kmk_A           74 ITHSRKHT   81 (82)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhhC
Confidence            99999985

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=1.9e-16  Score=133.39  Aligned_cols=86  Identities=21%  Similarity=0.467  Sum_probs=81.2

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSR  119 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~  119 (510)
                      ..+++|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|.....|+.|+++| ++++|+|+ |++.|.+
T Consensus        13 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   85 (106)
T 2ee8_A           13 KTKKEFICKFC-------GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ   85 (106)
T ss_dssp             CCCCCCBCSSS-------CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred             CCCcCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccC
Confidence            46789999998       999999999999999999999999999999999999999999995 89999999 9999999


Q ss_pred             hhHHHHHHHHhcccc
Q 010444          120 RDSFITHRAFCDALA  134 (510)
Q Consensus       120 kssL~~H~r~hh~~~  134 (510)
                      +..|.+|+++|+...
T Consensus        86 ~~~L~~H~~~H~~~~  100 (106)
T 2ee8_A           86 SRTLAVHKTLHMQTS  100 (106)
T ss_dssp             HHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999997653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=2e-16  Score=128.89  Aligned_cols=83  Identities=25%  Similarity=0.598  Sum_probs=77.5

Q ss_pred             cceeeCCC--CCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-hCCCceecC-CCCcccC
Q 010444           44 KRVYICPE--PSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSR  119 (510)
Q Consensus        44 ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~F~~  119 (510)
                      +++|.|++  |       ++.|.....|.+|+++|+++++|.|.+|++.|.....|+.|+++ +++++|.|+ |++.|.+
T Consensus         2 ~k~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESC-------DRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSC-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             CCceECCCCCC-------CCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCC
Confidence            67999985  6       99999999999999999999999999999999999999999999 599999999 9999999


Q ss_pred             hhHHHHHHHHhccc
Q 010444          120 RDSFITHRAFCDAL  133 (510)
Q Consensus       120 kssL~~H~r~hh~~  133 (510)
                      +..|.+|+++|++.
T Consensus        75 ~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           75 SDERKRHTKIHLRQ   88 (90)
T ss_dssp             HHHHHHHHGGGGC-
T ss_pred             HHHHHHHHHHhccc
Confidence            99999999998754

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.5e-16  Score=135.14  Aligned_cols=64  Identities=23%  Similarity=0.575  Sum_probs=56.0

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhccccccchh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDALAEENNK  139 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~~~~~~~k  139 (510)
                      .|+++++|+| +|++.|.....|+.|+++| ++++|+|+ |++.|.++..|..|++.|+......+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   69 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN   69 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECS
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCC
Confidence            5788999999 8999999999999999995 88999999 999999999999999998765544443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=1.4e-16  Score=136.26  Aligned_cols=82  Identities=16%  Similarity=0.311  Sum_probs=41.7

Q ss_pred             CCCcccccccCcccCChHHHHHHHHh--cCCCcccccccccccccce-eeCCCCCCCCCCCCCcc--CChhHHHhHhhhc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRG--HNLPWKLRQRTTTEVRKRV-YICPEPSCVHHNPARAL--GDLTGIKKHFSRK   76 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~--H~~p~k~~~~~~~~~~ekp-y~C~~C~C~~~~~~k~F--~~~s~Lk~H~r~H   76 (510)
                      +++||+|++|++.|.....|+.|++.  |.             .+++ +.|++|       ++.|  .....|.+|+++|
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~-------------~~~~~~~C~~C-------~~~f~f~~~~~l~~H~~~H   75 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTVHMNETGHY-------------RDDNHETDNNN-------PKRWSKPRKRSLLEMEGKE   75 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHHHHHHTCCC-------------BCSCCCCCCCC-------CSCCSSCCCCCCCCCCCSC
T ss_pred             CCCCEECCccCchhcCHHHHHHHHHHhCcc-------------ccCCCccCCCC-------CcccccccHHHHHHHhhcc
Confidence            34555555555555555555555554  22             2222 235555       3444  4555555555555


Q ss_pred             cCCcccccCcCCccccChhHHHHHHHH
Q 010444           77 HGEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        77 ~geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ++++||+|++|++.|..+..|+.|+++
T Consensus        76 ~~~~~~~C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           76 DAQKVLKCMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             CCCSSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             CCCcceECCCCCCccCCHHHHHHHHHH
Confidence            555555555555555555555555555

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.63  E-value=1.8e-16  Score=142.41  Aligned_cols=87  Identities=25%  Similarity=0.432  Sum_probs=83.1

Q ss_pred             ccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhccCCcccc
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRKHGEKKWK   83 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~   83 (510)
                      |+|++|++.|.....|+.|+++|+             ++++|.|++  |       ++.|.....|.+|+++|+++++|+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~L~~H~~~h~~~~~~~  122 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHT-------------GEKPFPCPFPGC-------GKIFARSENLKIHKRTHTGEKPFK  122 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHH-------------CCCSEECSCTTT-------CCEESCHHHHHHHHTTTCSSCSBC
T ss_pred             cCCCCcccccCCHHHHHHHHHhcC-------------CCCcccCCcCCC-------CCccCCHHHHHHHHHhhCCCCCcc
Confidence            899999999999999999999996             789999998  7       999999999999999999999999


Q ss_pred             cCc--CCccccChhHHHHHHHHh-CCCceecC
Q 010444           84 CDK--CSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        84 C~~--CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      |++  |++.|..+..|..|+++| ++|||+|.
T Consensus       123 C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            997  999999999999999994 99999984

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=6.2e-16  Score=127.41  Aligned_cols=83  Identities=23%  Similarity=0.473  Sum_probs=77.2

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CC--CceecC-CCCcc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GT--REYKCD-CGTIF  117 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-ge--KpykC~-Cgk~F  117 (510)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|..+..|..|+++| ++  ++|+|+ |++.|
T Consensus         3 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f   75 (95)
T 2yt9_A            3 SGSSGVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGF   75 (95)
T ss_dssp             CCCSCEECSSS-------CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCB
T ss_pred             CCCCCeECCCC-------CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchh
Confidence            36789999999       999999999999999999999999999999999999999999995 55  999999 99999


Q ss_pred             cChhHHHHHHHHhc
Q 010444          118 SRRDSFITHRAFCD  131 (510)
Q Consensus       118 ~~kssL~~H~r~hh  131 (510)
                      .++..|..|++..|
T Consensus        76 ~~~~~L~~H~~~~H   89 (95)
T 2yt9_A           76 SRPDHLNGHIKQVH   89 (95)
T ss_dssp             SSHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHhc
Confidence            99999999997433

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=7.9e-16  Score=127.73  Aligned_cols=83  Identities=27%  Similarity=0.652  Sum_probs=45.2

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC--cCCccccChhHHHHHHHHh-CCCceecC-CCCccc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD--KCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFS  118 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~--~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~  118 (510)
                      .+++|.|++..|     ++.|.....|.+|+++|+++++|+|.  .|++.|.....|..|+++| ++++|+|+ |++.|.
T Consensus        12 ~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   86 (100)
T 2ebt_A           12 KRRIHYCDYPGC-----TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFS   86 (100)
T ss_dssp             SCCCEECCSSSC-----CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCS
T ss_pred             cCcceEcCCCCC-----CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccC
Confidence            344555554111     55555555555555555555555553  3555555555555555552 55555555 555555


Q ss_pred             ChhHHHHHHHHh
Q 010444          119 RRDSFITHRAFC  130 (510)
Q Consensus       119 ~kssL~~H~r~h  130 (510)
                      ++..|..|+++|
T Consensus        87 ~~~~l~~H~~~H   98 (100)
T 2ebt_A           87 RSDHLALHMKRH   98 (100)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh
Confidence            555555555554

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.8e-17  Score=141.84  Aligned_cols=95  Identities=13%  Similarity=0.211  Sum_probs=84.7

Q ss_pred             HHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhh--ccCCcccc-cCcCCccc--cC
Q 010444           19 QNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSR--KHGEKKWK-CDKCSKKY--AV   93 (510)
Q Consensus        19 s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~--H~geKp~~-C~~CgK~F--~~   93 (510)
                      ..|+.|+++|+             ++++|.|++|       ++.|.....|.+|+++  |..++++. |++|++.|  ..
T Consensus         5 ~~l~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~   64 (115)
T 2dmi_A            5 SSGKLYGSIFT-------------GASKFRCKDC-------SAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR   64 (115)
T ss_dssp             CCCCCCCCCCC-------------CCCSEEBSSS-------SCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCC
T ss_pred             hhhhhheeeeC-------------CCCCEECCcc-------CchhcCHHHHHHHHHHhCccccCCCccCCCCCccccccc
Confidence            34666666665             8899999998       9999999999999999  88787765 99999999  99


Q ss_pred             hhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhccc
Q 010444           94 QSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        94 ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      +..|+.|+++| +++||+|+ |++.|.++..|.+|++.|+..
T Consensus        65 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             HHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            99999999995 89999999 999999999999999998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=9.7e-16  Score=131.59  Aligned_cols=87  Identities=22%  Similarity=0.482  Sum_probs=80.1

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      ++++|+|++|++.|.+...|++|++.|+          .+..+++|.|++|       ++.|.....|++|+++|+++++
T Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------~~~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   94 (124)
T 2dlq_A           32 GEKPFECPKCGKCYFRKENLLEHEARNC----------MNRSEQVFTCSVC-------QETFRRRMELRLHMVSHTGEMP   94 (124)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHCC----------CCSCCCCEECSSS-------CCEESSHHHHHHHHHHHSSSCS
T ss_pred             CCCCeECCCCCchhcCHHHHHHHHhhhh----------cCCCCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCC
Confidence            5789999999999999999999999763          1237889999999       9999999999999999999999


Q ss_pred             cccCcCCccccChhHHHHHHHH-hC
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT-CG  105 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt-hg  105 (510)
                      |+|++|++.|..+..|+.|++. |.
T Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           95 YKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             ccCCCccchhCCHHHHHHHHHHHCC
Confidence            9999999999999999999987 63

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=6.7e-16  Score=125.48  Aligned_cols=82  Identities=21%  Similarity=0.564  Sum_probs=51.9

Q ss_pred             CCcccccc--cCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhccC
Q 010444            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRKHG   78 (510)
Q Consensus         3 ekpy~C~~--CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H~g   78 (510)
                      +++|.|++  |++.|.....|..|++.|.             .+++|.|++  |       ++.|.....|.+|+++|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~   62 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT-------------GEKPYHCDWDGC-------GWKFARSDELTRHYRKHTG   62 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC-------------SSCCEECCSTTT-------CCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC-------------CCCCcCCCCCCC-------CCccCCHHHHHHHHHHcCC
Confidence            45666666  6666666666666666664             556666653  4       6666666666666666666


Q ss_pred             CcccccCcCCccccChhHHHHHHHHh
Q 010444           79 EKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        79 eKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +++|+|++|++.|.....|..|+++|
T Consensus        63 ~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           63 HRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHhh
Confidence            66666666666666666666666553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.61  E-value=6.6e-16  Score=133.33  Aligned_cols=88  Identities=22%  Similarity=0.455  Sum_probs=78.4

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      ++++|+|++|++.|.....|..|+++|+             ++++|.|++  |       ++.|.....|.+|+++|+++
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~   90 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHT-------------GEKPFQCTFEGC-------GKRFSLDFNLRTHVRIHTGD   90 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTS-------------CCCCEECCSTTC-------CCEESCHHHHHHHHHHHHCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcC-------------CCCCeeCCCCCC-------cCccCCHHHHHHHHHHhCCC
Confidence            4789999999999999999999999997             789999986  7       99999999999999999999


Q ss_pred             cccccC--cCCccccChhHHHHHHHHh-CCCce
Q 010444           80 KKWKCD--KCSKKYAVQSDWKAHQKTC-GTREY  109 (510)
Q Consensus        80 Kp~~C~--~CgK~F~~ks~Lk~H~rth-geKpy  109 (510)
                      ++|+|+  .|++.|..+..|..|+++| ++|++
T Consensus        91 ~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           91 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            999996  5999999999999999995 77765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.59  E-value=1.1e-15  Score=130.61  Aligned_cols=83  Identities=25%  Similarity=0.573  Sum_probs=78.9

Q ss_pred             CCCccccc--ccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444            2 ATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus         2 gekpy~C~--~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      ++++|+|+  .|++.|.....|+.|++.|+             ++++|.|++|       ++.|.....|++|+++|+++
T Consensus        33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           33 GEKPYQCDFKDCERRFSRSDQLKRHQRRHT-------------GVKPFQCKTC-------QRKFSRSDHLKTHTRTHTGE   92 (119)
T ss_dssp             TTCCEECCSTTCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHHHHHTC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHcC-------------CCCCccCCcc-------CchhCCHHHHHHHHHHhcCC
Confidence            57899999  79999999999999999996             7899999999       99999999999999999999


Q ss_pred             ccccc--CcCCccccChhHHHHHHHHh
Q 010444           80 KKWKC--DKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C--~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ++|+|  ++|++.|..+..|+.|+++|
T Consensus        93 ~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           93 KPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999  89999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=2e-16  Score=129.67  Aligned_cols=84  Identities=20%  Similarity=0.330  Sum_probs=79.5

Q ss_pred             cceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHhCCCceecC-CCCcccChhH
Q 010444           44 KRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDS  122 (510)
Q Consensus        44 ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kss  122 (510)
                      +++|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|.....|..|+++|..++|.|+ |++.|..+..
T Consensus         1 ek~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            1 MKPFQCRIC-------MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCCEECTTT-------CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCC-------CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhh
Confidence            578999999       99999999999999999999999999999999999999999999767999999 9999999999


Q ss_pred             HHHHHHHhcccc
Q 010444          123 FITHRAFCDALA  134 (510)
Q Consensus       123 L~~H~r~hh~~~  134 (510)
                      |..|++.++...
T Consensus        74 L~~H~~~~h~~~   85 (88)
T 1llm_C           74 LENEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHh
Confidence            999999887653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=4.1e-16  Score=127.78  Aligned_cols=80  Identities=21%  Similarity=0.337  Sum_probs=76.8

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~   82 (510)
                      ||||+|++|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|++ ++|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~h~~-~~~   59 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT-------------GEKPFACDIC-------GRKFARSDERKRHRDIQHI-LPI   59 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESSHHHHHHHHHHHTH-HHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHhCC-Ccc
Confidence            689999999999999999999999996             7899999998       9999999999999999985 899


Q ss_pred             ccCcCCccccChhHHHHHHHH
Q 010444           83 KCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        83 ~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      .|+.|++.|.....|..|++.
T Consensus        60 ~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           60 LEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999999999998

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=3.9e-15  Score=123.48  Aligned_cols=63  Identities=17%  Similarity=0.492  Sum_probs=36.9

Q ss_pred             ccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           37 RTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        37 ~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +...+..+++|.|++..|     ++.|.....|.+|+++|+++++|+|++|++.|..+..|..|+++|
T Consensus        36 H~~~h~~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           36 HLRTHTGEKPYKCTWEGC-----DWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             HHHHHSCCCCEECCSSSC-----CCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             HHHHhCCCCCeeCCCCCC-----CCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            333444556666653111     566666666666666666666666666666666666666666654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.5e-15  Score=127.25  Aligned_cols=83  Identities=20%  Similarity=0.304  Sum_probs=75.7

Q ss_pred             cccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHhCCCceecC-CCCccc
Q 010444           40 TEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFS  118 (510)
Q Consensus        40 ~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~  118 (510)
                      .+.++++|.|++|       ++.|.....|.+|+++|  +++|+|++|++.|.....|+.|++-++++||+|+ |++.|.
T Consensus        10 ~h~~~~~~~C~~C-------~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~   80 (107)
T 1wjp_A           10 PVENKEVYQCRLC-------NAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFK   80 (107)
T ss_dssp             CCCCCCCCBCTTT-------CCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECS
T ss_pred             ccCCCcCeECCCC-------CCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhC
Confidence            3458899999999       99999999999999998  4899999999999999999999962489999999 999999


Q ss_pred             ChhHHHHHHH-Hhc
Q 010444          119 RRDSFITHRA-FCD  131 (510)
Q Consensus       119 ~kssL~~H~r-~hh  131 (510)
                      ++..|++|++ .|.
T Consensus        81 ~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           81 SSFSIWRHQVEVHN   94 (107)
T ss_dssp             SHHHHHHHHHHTSC
T ss_pred             CHHHHHHHHHHHcC
Confidence            9999999998 553

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=3e-16  Score=137.10  Aligned_cols=118  Identities=13%  Similarity=0.212  Sum_probs=90.0

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      ++|+|.|..++....  ..+..|++.+.          ....++.+.|++|.. .....+.|.....|..|+ +|++++|
T Consensus         9 ~~k~~~~~~k~~~~~--~s~ee~~~~~~----------l~~~~~~~~c~~~~~-~~~~~~~~~~~~~l~~h~-~h~~~~~   74 (129)
T 2wbt_A            9 GSKKYLSNHKGIFIH--VTLEELKRYHQ----------LTPEQKRLIRAIVKT-LIHNPQLLDESSYLYRLL-ASKAISQ   74 (129)
T ss_dssp             TCCGGGGCSSCEEEE--CCHHHHHHHTT----------SCHHHHHHHHHHHHH-HHHCGGGTTTHHHHHHHH-HHHHHCS
T ss_pred             cccccccccCCeeee--ecHHhhhcccc----------CChhhCcccchhhhc-ccCCCcccCCHHHHHHHH-HhCCCCC
Confidence            689999987654432  34555655553          112456777887710 000124455677787777 6999999


Q ss_pred             cccCcCCccccChhHHHHHHHHhCCCceecC-CCCcccChhHHHHHHHHhcccc
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFITHRAFCDALA  134 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL~~H~r~hh~~~  134 (510)
                      |+|++|++.|.....|+.|+++| ++||+|+ |++.|.++..|.+|++.|+++.
T Consensus        75 ~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             eECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            99999999999999999999999 9999999 9999999999999999998764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.55  E-value=6.1e-15  Score=119.75  Aligned_cols=83  Identities=28%  Similarity=0.610  Sum_probs=76.0

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC--cCCccccChhHHHHHHHHh-CCCceecC-CCCccc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD--KCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFS  118 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~--~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~  118 (510)
                      ..++|.|++..|     ++.|.....|.+|+++|+++++|+|+  .|++.|.....|..|+++| ++++|+|+ |++.|.
T Consensus         2 ~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (89)
T 2wbs_A            2 RTATHTCDYAGC-----GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS   76 (89)
T ss_dssp             -CCCEECCSTTT-----CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred             CCCCeeCCCCCC-----CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccC
Confidence            357899999222     99999999999999999999999997  5999999999999999994 99999999 999999


Q ss_pred             ChhHHHHHHHHh
Q 010444          119 RRDSFITHRAFC  130 (510)
Q Consensus       119 ~kssL~~H~r~h  130 (510)
                      .+..|..|++.|
T Consensus        77 ~~~~l~~H~~~H   88 (89)
T 2wbs_A           77 RSDHLALHMKRH   88 (89)
T ss_dssp             SHHHHHHHGGGG
T ss_pred             CHHHHHHHHHhh
Confidence            999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7e-15  Score=117.22  Aligned_cols=70  Identities=19%  Similarity=0.499  Sum_probs=53.3

Q ss_pred             CCCcccccc--cCcccCChHHHHHHHH-hcCCCcccccccccccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhc
Q 010444            2 ATNRFVCEI--CNKGFQRDQNLQLHRR-GHNLPWKLRQRTTTEVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus         2 gekpy~C~~--CgK~F~~~s~Lk~H~r-~H~~p~k~~~~~~~~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      ++++|+|+.  |++.|.....|++|++ .|.             .+++|.|++  |       ++.|.....|++|+++|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~H   63 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-------------HQKSFSCPEPAC-------GKSFNFKKHLKEHMKLH   63 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGG-------------SCCCEECSCTTT-------CCEESSHHHHHHHHHHH
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhC-------------CCCCeECCCCCC-------cCccCCHHHHHHHHHHh
Confidence            567777776  8888888888888877 564             567777777  6       77777777777777777


Q ss_pred             cCCcccccCcCCccc
Q 010444           77 HGEKKWKCDKCSKKY   91 (510)
Q Consensus        77 ~geKp~~C~~CgK~F   91 (510)
                      +++++|+|++|++.|
T Consensus        64 ~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           64 SDTRDYICEFSGPSS   78 (79)
T ss_dssp             HTSCCCSCCSSSCCC
T ss_pred             CCCCCeeCCCCCCCC
Confidence            777777777777776

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=8.1e-15  Score=114.36  Aligned_cols=58  Identities=26%  Similarity=0.582  Sum_probs=44.2

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      ||||+|++|+|.|.....|++|+++|+             +++||.|++|       ++.|.....|.+|+++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~C-------~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-------------GYRPRSCPEC-------GKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-------------TCCCEECTTT-------CCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-------------CCcCeECCCC-------CCCcCCHHHHHHHhCccCCCC
Confidence            677888888888888777888877775             7777777777       777777777777777777653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=3.9e-14  Score=113.56  Aligned_cols=76  Identities=26%  Similarity=0.544  Sum_probs=62.5

Q ss_pred             cccc--cccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            5 RFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         5 py~C--~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      ||+|  ++|++.|.....|+.|+++|.             ++++|.|++  |       ++.|.....|++|+++|++  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~--   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-------------QQLPYECPHEGC-------DKRFSLPSRLKRHEKVHAG--   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHHHS--
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-------------CCCCeeCCCCCC-------cCccCCHHHHHHHHHHhCC--
Confidence            6788  788888888888888888875             677888877  6       7888888888888888877  


Q ss_pred             ccccCc---CCccccChhHHHHHHHH
Q 010444           81 KWKCDK---CSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        81 p~~C~~---CgK~F~~ks~Lk~H~rt  103 (510)
                       |+|.+   |++.|.....|+.|+++
T Consensus        59 -~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           59 -YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             -EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             -CCCCCCCCCCCccCCHHHHHHHHHh
Confidence             88888   88888888888888776

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.47  E-value=2.3e-14  Score=111.79  Aligned_cols=54  Identities=24%  Similarity=0.473  Sum_probs=33.5

Q ss_pred             cceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           44 KRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        44 ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ||||+|++|       ++.|.....|.+|+++|+++|||+|++|+|.|..++.|+.|+++|
T Consensus         2 EKpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNFC-------GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCEECTTT-------CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCC-------CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            456666665       566666666666666666666666666666666666666666654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.7e-14  Score=115.21  Aligned_cols=68  Identities=19%  Similarity=0.444  Sum_probs=58.8

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC----cccccCcCCccccChhHHHHHHHH-hCCCceecC-CCCc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE----KKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTI  116 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge----Kp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~  116 (510)
                      .+++|.|++|       ++.|.....|.+|+++|+.+    ++|+|++|++.|..+..|+.|+++ ++++++.|. |+..
T Consensus        12 ~~k~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           12 GEKPYACSHC-------DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CCCCEECSSS-------SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            7888999998       89999999999998877765    789999999999999999999998 588899998 8876


Q ss_pred             c
Q 010444          117 F  117 (510)
Q Consensus       117 F  117 (510)
                      |
T Consensus        85 ~   85 (86)
T 1x6h_A           85 S   85 (86)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=8.3e-14  Score=111.13  Aligned_cols=62  Identities=27%  Similarity=0.573  Sum_probs=37.7

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      .+++|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|
T Consensus        15 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCC-------CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4556666665       566666666666666666666666666666666666666666653 5566655

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.3e-13  Score=109.86  Aligned_cols=71  Identities=24%  Similarity=0.521  Sum_probs=65.3

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhh-hccCCcccccCc--CCccccChhHHHHHHHHh-CCCceecC-CCCcc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCDK--CSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIF  117 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H~geKp~~C~~--CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F  117 (510)
                      ++++|.|+...|     ++.|.....|++|++ .|.++++|+|++  |++.|..+..|+.|+++| +++||+|+ |++.|
T Consensus         4 ~~~~~~C~~~~C-----~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGC-----GRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTT-----CCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCC-----cCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            678999998333     999999999999999 799999999999  999999999999999995 99999999 99998


Q ss_pred             c
Q 010444          118 S  118 (510)
Q Consensus       118 ~  118 (510)
                      .
T Consensus        79 ~   79 (79)
T 2dlk_A           79 G   79 (79)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.42  E-value=1.9e-13  Score=109.51  Aligned_cols=77  Identities=23%  Similarity=0.561  Sum_probs=71.5

Q ss_pred             eeeC--CCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc--CCccccChhHHHHHHHHhCCCceecC----CCCcc
Q 010444           46 VYIC--PEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK--CSKKYAVQSDWKAHQKTCGTREYKCD----CGTIF  117 (510)
Q Consensus        46 py~C--~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~--CgK~F~~ks~Lk~H~rthgeKpykC~----Cgk~F  117 (510)
                      ||+|  +.|       ++.|.....|++|+++|+++++|+|++  |++.|..+..|+.|+++|..  |.|+    |++.|
T Consensus         1 p~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f   71 (85)
T 2j7j_A            1 MYVCHFENC-------GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVG   71 (85)
T ss_dssp             CEECCSTTC-------CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEE
T ss_pred             CccCCCCCC-------CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCcc
Confidence            6899  777       999999999999999999999999998  99999999999999999633  9994    99999


Q ss_pred             cChhHHHHHHHHhc
Q 010444          118 SRRDSFITHRAFCD  131 (510)
Q Consensus       118 ~~kssL~~H~r~hh  131 (510)
                      .+...|.+|++.||
T Consensus        72 ~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           72 KTWTLYLKHVAECH   85 (85)
T ss_dssp             SSHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHhcC
Confidence            99999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.1e-13  Score=119.06  Aligned_cols=63  Identities=17%  Similarity=0.198  Sum_probs=30.1

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhh-hc---cCCcccccCcCCccccChhHHHHH-HHHh-CCCceecC
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFS-RK---HGEKKWKCDKCSKKYAVQSDWKAH-QKTC-GTREYKCD  112 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H---~geKp~~C~~CgK~F~~ks~Lk~H-~rth-geKpykC~  112 (510)
                      ++++|.|++|       ++.|..+..|++|++ .|   .+++||+|++|+|.|..+..|+.| +++| ++|||+|.
T Consensus        15 gekpy~C~~C-------gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           15 VEGGYECKYC-------TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCSSEECSSC-------SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            4444444444       444444444444444 24   234455555555555555555555 3442 44555554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.5e-13  Score=108.59  Aligned_cols=75  Identities=13%  Similarity=0.334  Sum_probs=66.0

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      +++++|+|++|++.|.....|++|++.|+.         ....+++|.|++|       ++.|.....|.+|+++|++++
T Consensus        11 ~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~---------~~~~~~~~~C~~C-------~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A           11 TGEKPYACSHCDKTFRQKQLLDMHFKRYHD---------PNFVPAAFVCSKC-------GKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTTC---------SSCCCCCEECSSS-------CCEESCHHHHHHHHHHCCCCC
T ss_pred             cCCCCCcCCCCCCccCCHHHHHHHHHHhcC---------CcCCCcceECCCC-------CChhCCHHHHHHHHHHccCCC
Confidence            368999999999999999999999998761         0012379999998       999999999999999999999


Q ss_pred             ccccCcCCccc
Q 010444           81 KWKCDKCSKKY   91 (510)
Q Consensus        81 p~~C~~CgK~F   91 (510)
                      ++.|..|+..|
T Consensus        75 ~~~~~~~~~~~   85 (86)
T 1x6h_A           75 GVEGENSGPSS   85 (86)
T ss_dssp             SCCCCCCCCCC
T ss_pred             CcccCCCCCCC
Confidence            99999999865

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=7.4e-14  Score=117.34  Aligned_cols=73  Identities=16%  Similarity=0.256  Sum_probs=66.2

Q ss_pred             CccCChhHHHhHhhhccCCcccccCcCCcccc-ChhHHHHHHHHh-C-CCceecC-CCCcccChhHHHHHHHHhccc
Q 010444           61 RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYA-VQSDWKAHQKTC-G-TREYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        61 k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~-~ks~Lk~H~rth-g-eKpykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      ..+.....+.+|+++|.++++|+|++|++.|. .+..|+.|+++| + +++|+|+ |++.|.++..|.+|++.|+..
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            44556667789999999999999999999999 999999999994 6 8999999 999999999999999999864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=3.6e-13  Score=106.57  Aligned_cols=60  Identities=20%  Similarity=0.513  Sum_probs=38.2

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCce
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREY  109 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpy  109 (510)
                      .+++|+|++|       ++.|.....|.+|+++|+++++|+|.+|++.|..+..|+.|+++| ++|||
T Consensus        14 ~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRC-------QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTS-------SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCC-------CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4566666665       666666666666666666666666666666666666666666663 55554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.3e-13  Score=115.90  Aligned_cols=79  Identities=16%  Similarity=0.331  Sum_probs=71.1

Q ss_pred             ccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccC-ChhHHHhHhhhccC-CcccccCcCCccc
Q 010444           14 GFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALG-DLTGIKKHFSRKHG-EKKWKCDKCSKKY   91 (510)
Q Consensus        14 ~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~-~~s~Lk~H~r~H~g-eKp~~C~~CgK~F   91 (510)
                      .+.....+..|+++|.             .+++|.|++|       ++.|. ....|++|+++|++ +++|+|++|+|.|
T Consensus         5 s~~~~~~~~~h~~~h~-------------~~~~~~C~~C-------~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F   64 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIH-------------ERGEAVCPTC-------NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF   64 (98)
T ss_dssp             CCCCCCSCSHHHHTTT-------------TTSCCCCTTT-------CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred             CCCCCCcHHHHHHHhc-------------cCCCcCCCCC-------CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence            4556667888999986             7899999999       99999 99999999999999 9999999999999


Q ss_pred             cChhHHHHHHHH-hCCCceecC
Q 010444           92 AVQSDWKAHQKT-CGTREYKCD  112 (510)
Q Consensus        92 ~~ks~Lk~H~rt-hgeKpykC~  112 (510)
                      ..+..|+.|+++ |++||+..+
T Consensus        65 ~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           65 KSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             SCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCC
Confidence            999999999999 688887654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=5.6e-13  Score=112.59  Aligned_cols=76  Identities=16%  Similarity=0.216  Sum_probs=43.1

Q ss_pred             cccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCcc-CChhHHHhHhhhccCCcccccCcCCccc
Q 010444           13 KGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARAL-GDLTGIKKHFSRKHGEKKWKCDKCSKKY   91 (510)
Q Consensus        13 K~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F-~~~s~Lk~H~r~H~geKp~~C~~CgK~F   91 (510)
                      ..|.....|..|++.|.             .+++|.|++|       ++.| .....|+.|+++| ++++|+|.+|+|.|
T Consensus        14 ~~~~~~~~~~~~~~~~~-------------~~~~~~C~~C-------~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F   72 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIV-------------DKGSVSCPTC-------QAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQL   72 (96)
T ss_dssp             CSSCTTCHHHHHHHHHH-------------HTSCEECTTT-------CSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCC
T ss_pred             CCCCCchHHHHHHHHhc-------------CCCCcCCCCC-------CCCcccCHHHHHHHHHHH-CCCCeECCCCCCee
Confidence            34455555555555553             4555666655       5666 5666666666666 55666666666666


Q ss_pred             cChhHHHHH-HHHhCCCce
Q 010444           92 AVQSDWKAH-QKTCGTREY  109 (510)
Q Consensus        92 ~~ks~Lk~H-~rthgeKpy  109 (510)
                      ..+..|+.| +++|.++||
T Consensus        73 ~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           73 RSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SSHHHHHHHHHHHTCCCSS
T ss_pred             CCHHHHHHHhHHhcCCCCC
Confidence            666666666 444544443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.8e-13  Score=107.23  Aligned_cols=63  Identities=32%  Similarity=0.720  Sum_probs=57.2

Q ss_pred             hhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhccccc
Q 010444           73 FSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDALAE  135 (510)
Q Consensus        73 ~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~~~~  135 (510)
                      ...+.++++|+|++|++.|.....|+.|+++| ++++|+|+ |++.|.++..|.+|+++|++..+
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            34567899999999999999999999999995 88999999 99999999999999999986543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.2e-13  Score=108.69  Aligned_cols=65  Identities=18%  Similarity=0.398  Sum_probs=58.0

Q ss_pred             HHhHhhhccCCcccccCcCCccccChhHHHHHHHH-hC--CCceecC-CCCcccChhHHHHHHHHhccc
Q 010444           69 IKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CG--TREYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        69 Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hg--eKpykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      |.+|+++|++++||+|++|++.|..+..|+.|++. |.  +++|+|+ |++.|.++..|.+|++.+|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999985 63  3899999 999999999999999988764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=5.2e-13  Score=112.77  Aligned_cols=72  Identities=14%  Similarity=0.264  Sum_probs=66.8

Q ss_pred             CccCChhHHHhHhhhccCCcccccCcCCccc-cChhHHHHHHHHhCCCceecC-CCCcccChhHHHHH-HHHhcc
Q 010444           61 RALGDLTGIKKHFSRKHGEKKWKCDKCSKKY-AVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFITH-RAFCDA  132 (510)
Q Consensus        61 k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F-~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL~~H-~r~hh~  132 (510)
                      ..|.....|..|.+.|+++++|+|++|+|.| ..+..|+.|+++|+++||+|+ |++.|.++..|+.| +++|..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            4667778899999999999999999999999 999999999999989999999 99999999999999 777753

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=8.2e-13  Score=104.13  Aligned_cols=60  Identities=32%  Similarity=0.650  Sum_probs=46.4

Q ss_pred             hhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhcc
Q 010444           73 FSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        73 ~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      .++|.++++|+|++|++.|.....|+.|+++| +++||+|+ |++.|.++..|.+|+++|+.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            45677778888888888888888888887774 67788887 88888888888888877754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=8.1e-13  Score=101.93  Aligned_cols=59  Identities=29%  Similarity=0.598  Sum_probs=48.9

Q ss_pred             hhccCCcccccCcCCccccChhHHHHHHHH-h--CCCceecC-CCCcccChhHHHHHHHHhcc
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-C--GTREYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-h--geKpykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      ++|.++++|+|++|++.|..+..|..|+++ |  +++||+|+ |++.|.++..|..|++.+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            567788888888888888888888888887 6  67888888 88888888888888888775

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=1.5e-12  Score=103.07  Aligned_cols=60  Identities=27%  Similarity=0.715  Sum_probs=55.5

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhcccc
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDALA  134 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~~~  134 (510)
                      .+.++++|+|++|++.|..+..|+.|+++| ++++|+|+ |++.|.++..|.+|++.|++..
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            466789999999999999999999999995 88999999 9999999999999999997653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.6e-12  Score=101.75  Aligned_cols=59  Identities=19%  Similarity=0.287  Sum_probs=37.3

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-hCCCc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTRE  108 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKp  108 (510)
                      .+++|.|++|       ++.|.....|++|+++|+++++|+|++|++.|..+..|+.|+++ |+++|
T Consensus         6 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            6 SGHPEKCSEC-------SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            4566666665       56666666666666666666666666666666666666666666 45554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.28  E-value=6.9e-13  Score=115.65  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=69.7

Q ss_pred             CCcccccccCcccC------ChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhc
Q 010444            3 TNRFVCEICNKGFQ------RDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus         3 ekpy~C~~CgK~F~------~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      +++|.|++|.+.|.      ....|..|++ |+             ++++|.|++|       ++.|.....|.+|+++|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~-h~-------------~~~~~~C~~C-------~k~f~~~~~l~~H~~~H   97 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLLA-SK-------------AISQFVCPLC-------LMPFSSSVSLKQHIRYT   97 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHHH-HH-------------HHCSEECTTT-------CCEESSHHHHHHHHHHT
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHHH-hC-------------CCCCeECCCC-------CcccCCHhHHHHHHHHC
Confidence            35678998877766      6677777774 54             7899999999       99999999999999999


Q ss_pred             cCCcccccCcCCccccChhHHHHHHHHh
Q 010444           77 HGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        77 ~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                        ++||+|++|++.|..+..|+.|+++|
T Consensus        98 --~~~~~C~~C~k~f~~~~~l~~H~~~h  123 (129)
T 2wbt_A           98 --EHTKVCPVCKKEFTSTDSALDHVCKK  123 (129)
T ss_dssp             --CCCCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             --CCCCCCCCCCcccCCHHHHHHHHHHH
Confidence              89999999999999999999999994

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.9e-12  Score=111.30  Aligned_cols=66  Identities=17%  Similarity=0.293  Sum_probs=58.4

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHH-h----CCCceecC-CCCcccChhHHHHH-HHHhccccccchhh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKT-C----GTREYKCD-CGTIFSRRDSFITH-RAFCDALAEENNKV  140 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-h----geKpykC~-Cgk~F~~kssL~~H-~r~hh~~~~~~~k~  140 (510)
                      ...+++||+|++|++.|..+..|+.|+++ |    +++||+|+ |++.|.++..|..| +++|.+..+..+.+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            35689999999999999999999999985 7    47999999 99999999999999 78998776666654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=4.7e-12  Score=99.02  Aligned_cols=61  Identities=16%  Similarity=0.334  Sum_probs=56.7

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhccccc
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDALAE  135 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~~~~  135 (510)
                      .|.++++|+|++|++.|..+..|+.|+++| ++++|+|+ |++.|.++..|.+|++.|+...+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            477899999999999999999999999995 89999999 99999999999999999987644

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=5e-12  Score=94.44  Aligned_cols=53  Identities=23%  Similarity=0.462  Sum_probs=33.8

Q ss_pred             CcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhc
Q 010444           79 EKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus        79 eKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh  131 (510)
                      +++|+|++|++.|.....|..|+++| +++||+|+ |++.|.++..|..|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46666666666666666666666663 66666666 6666666666666666654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=6.3e-12  Score=99.01  Aligned_cols=58  Identities=26%  Similarity=0.448  Sum_probs=55.0

Q ss_pred             cccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           40 TEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        40 ~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      .+.++++|.|++|       ++.|.....|++|+++|+++++|+|++|++.|..+..|+.|+++|
T Consensus         8 ~H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            8 IHSGEKPYGCVEC-------GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             TTTTCCCEECSSS-------CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCccCCCC-------CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            3458899999998       999999999999999999999999999999999999999999996

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.24  E-value=5.1e-12  Score=94.39  Aligned_cols=56  Identities=27%  Similarity=0.492  Sum_probs=29.6

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      |++||+|++|++.|.....|+.|+++|+             ++++|.|++|       ++.|.....|.+|+++|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHT-------------GEKPYKCEFC-------EYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHH-------------CCCCEECSSS-------SCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcC-------------CCCCcCCCCC-------cchhCCHHHHHHHHHHhc
Confidence            3455666666666666666666655554             4555555555       555555555555555554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7.9e-12  Score=99.62  Aligned_cols=58  Identities=22%  Similarity=0.524  Sum_probs=48.1

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh-C---CCceecC-CCCcccChhHHHHHHHHhcc
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-G---TREYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-g---eKpykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      .|+++|+|+|++|++.|..+..|..|+++| +   +++|+|+ |++.|.++..|.+|++.+|.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            367888888888888888888888888885 3   7888888 99999888888888866654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=4.1e-12  Score=101.22  Aligned_cols=60  Identities=18%  Similarity=0.319  Sum_probs=53.5

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhh-hccCC-cccccCcCCccccChhHHHHHHHH-hC-CCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFS-RKHGE-KKWKCDKCSKKYAVQSDWKAHQKT-CG-TRE  108 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H~ge-Kp~~C~~CgK~F~~ks~Lk~H~rt-hg-eKp  108 (510)
                      .++++|.|++|       ++.|.....|++|++ .|.++ ++|+|++|++.|..+..|+.|+++ |. ++|
T Consensus        11 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           11 SGEKPYECYIC-------HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             SCCCSEECTTT-------CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCCCeECCCc-------CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            38999999999       999999999999997 67664 899999999999999999999999 53 444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.18  E-value=2.3e-11  Score=90.83  Aligned_cols=56  Identities=25%  Similarity=0.459  Sum_probs=37.5

Q ss_pred             cccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      ||+|++|++.|.....|..|+++|+             ++++|.|++|       ++.|.....|.+|+++|+++|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-------------DVRPYHCTYC-------NFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-------------SCCCEECSSS-------SCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-------------CCCCccCCCC-------CchhcCHHHHHHHHHHhcccC
Confidence            5667777777777777777776665             5566666666       666666666666666666554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.18  E-value=2.3e-11  Score=101.22  Aligned_cols=54  Identities=13%  Similarity=0.369  Sum_probs=28.6

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ..++|.|++|       ++.|..+..|++|+++|+++|||+|++|+|.|.++..|++|++.
T Consensus        25 ~~~~h~C~~C-------gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           25 SAECHLCPVC-------GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCTTEECTTS-------CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCEECCCC-------CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            3445555555       55555555555555555555555555555555555555555443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.1e-11  Score=97.11  Aligned_cols=44  Identities=14%  Similarity=0.333  Sum_probs=21.7

Q ss_pred             CCccCChhHHHhHhhhccC---CcccccCcCCccccChhHHHHHHHH
Q 010444           60 ARALGDLTGIKKHFSRKHG---EKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        60 ~k~F~~~s~Lk~H~r~H~g---eKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ++.|.....|.+|+++|++   +++|+|++|++.|..+..|+.|++.
T Consensus        14 ~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A           14 GFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHH
Confidence            4444444444444444443   4455555555555555555555543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.18  E-value=2.2e-11  Score=101.28  Aligned_cols=59  Identities=17%  Similarity=0.377  Sum_probs=54.1

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHh-hhccCCc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHF-SRKHGEK   80 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~-r~H~geK   80 (510)
                      .+++|+|++|++.|.++..|++|+++|+             ++++|.|++|       ++.|..+..|.+|+ +.|.+|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLH-------------AAQVFPCKYC-------PATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTS-------------CSSSEECTTS-------SCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhcc-------------CCCccCCCCC-------CCEeCCHHHHHHhCcccCcCCC
Confidence            4688999999999999999999999997             8999999999       99999999999997 5677664

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=5.4e-11  Score=97.75  Aligned_cols=53  Identities=13%  Similarity=0.287  Sum_probs=33.6

Q ss_pred             CCccCChhHHHhHhhh-ccCCcc--------cccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           60 ARALGDLTGIKKHFSR-KHGEKK--------WKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        60 ~k~F~~~s~Lk~H~r~-H~geKp--------~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      ++.|.....|.+|+++ |.++++        |+|++|++.|..+..|+.|+++| ++|||+|+
T Consensus        32 ~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5555555555555554 444444        67777777777777777777774 67777764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=4.2e-11  Score=94.00  Aligned_cols=56  Identities=21%  Similarity=0.541  Sum_probs=44.3

Q ss_pred             hccCCcccccC--cCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHh
Q 010444           75 RKHGEKKWKCD--KCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus        75 ~H~geKp~~C~--~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~h  130 (510)
                      +|.++++|+|+  .|++.|..+..|+.|+++| ++++|+|+ |++.|.++..|.+|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            46677888886  4888888888888888874 77888888 888888888888887765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=9e-11  Score=88.59  Aligned_cols=55  Identities=31%  Similarity=0.622  Sum_probs=35.5

Q ss_pred             CcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHh-hhccC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHF-SRKHG   78 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~-r~H~g   78 (510)
                      |||+|++|++.|.....|++|+++|+             ++++|.|++|       ++.|.....|.+|+ +.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT-------------NEKPYPCGLC-------NRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT-------------SSCSEECTTT-------CCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHHcCC
Confidence            46667777777777666777766665             5566666666       66666666666664 45543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=7.3e-11  Score=90.81  Aligned_cols=58  Identities=19%  Similarity=0.412  Sum_probs=53.5

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhh-c-cCCcccccCcCCccccChhHHHHHHHH-hC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSR-K-HGEKKWKCDKCSKKYAVQSDWKAHQKT-CG  105 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~-H-~geKp~~C~~CgK~F~~ks~Lk~H~rt-hg  105 (510)
                      +.++++|.|++|       ++.|.....|.+|+++ | .++++|+|++|++.|..+..|+.|+++ |+
T Consensus         5 h~~~k~~~C~~C-------~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVC-------SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTT-------CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCC-------cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            348899999999       9999999999999998 6 589999999999999999999999998 44

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.09  E-value=8.5e-11  Score=87.67  Aligned_cols=51  Identities=22%  Similarity=0.465  Sum_probs=32.0

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ||.|++|       ++.|.....|.+|+++|+++++|+|++|++.|.....|..|+++
T Consensus         1 p~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            1 KYICEEC-------GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CCcCCCC-------cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH
Confidence            3556665       56666666666666666666666666666666666666666665

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=1.5e-10  Score=95.03  Aligned_cols=58  Identities=14%  Similarity=0.267  Sum_probs=51.3

Q ss_pred             cccccCcCCccccChhHHHHHHHH-h-CCCc--------eecC-CCCcccChhHHHHHHHHhccccccc
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT-C-GTRE--------YKCD-CGTIFSRRDSFITHRAFCDALAEEN  137 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt-h-geKp--------ykC~-Cgk~F~~kssL~~H~r~hh~~~~~~  137 (510)
                      ..|.|++|++.|..+..|..|+++ | ++++        |.|+ |++.|.++..|+.|+++|.+..+..
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            457899999999999999999998 7 5666        9999 9999999999999999998765443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.1e-13  Score=104.15  Aligned_cols=68  Identities=13%  Similarity=0.173  Sum_probs=58.0

Q ss_pred             HHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHH
Q 010444           19 QNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWK   98 (510)
Q Consensus        19 s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk   98 (510)
                      ..|+.|+++|.             ++++|.|++|       ++.|.....|..       +++|+|++|++.|.....|.
T Consensus         4 ~~l~~H~~~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~   56 (73)
T 2ctu_A            4 GSSGKRQKIHL-------------GDRSQKCSKC-------GIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALN   56 (73)
T ss_dssp             CSCCCCCCCCC-------------CCSEEECSSS-------CCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSC
T ss_pred             hhHHHHHHHhC-------------CCCCeeCCcc-------cchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHH
Confidence            34566666664             7899999998       899998888776       78999999999999999999


Q ss_pred             HHHHHh-CCCceecC-C
Q 010444           99 AHQKTC-GTREYKCD-C  113 (510)
Q Consensus        99 ~H~rth-geKpykC~-C  113 (510)
                      .|+++| +++||+|+ |
T Consensus        57 ~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           57 KDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSSCCCCCCCSSCCCC
T ss_pred             HHHHhhcCCCCCCCCCC
Confidence            999995 88999998 7

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=1.5e-10  Score=87.28  Aligned_cols=49  Identities=20%  Similarity=0.532  Sum_probs=27.6

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHH
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQ  101 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~  101 (510)
                      +|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|..+..|..|+
T Consensus         2 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVC-------TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTT-------CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCC-------ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555       555555555555555555555555555555555555555554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=2.8e-10  Score=89.25  Aligned_cols=57  Identities=21%  Similarity=0.509  Sum_probs=49.8

Q ss_pred             ccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           41 EVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        41 ~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +.++++|.|++  |       ++.|.....|.+|+++|+++++|+|++|++.|..+..|..|+++|
T Consensus        14 ~~~~~~~~C~~~~C-------~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESC-------DRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTB-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCC-------CCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            34788899974  6       899999999999999999999999999999999999999998875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.5e-10  Score=88.51  Aligned_cols=53  Identities=19%  Similarity=0.283  Sum_probs=39.5

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC-cCCccccChhHHHHHHHHh
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD-KCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~-~CgK~F~~ks~Lk~H~rth  104 (510)
                      .+++|.|++|       ++.|. ...|+.|+++ ++++||+|+ +|++.|..+..|+.|+++|
T Consensus         7 ~~~~~~C~~C-------~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            7 GKRTQPCTYC-------TKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCEEECSSS-------CCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCCeecccc-------CCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            5677777776       77777 7777777777 777777777 7777777777777777774

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.99  E-value=1.9e-10  Score=82.60  Aligned_cols=43  Identities=23%  Similarity=0.436  Sum_probs=37.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5788888999999999999999999999999885 88899987 6

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.5e-10  Score=81.70  Aligned_cols=43  Identities=33%  Similarity=0.504  Sum_probs=37.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5788899999999999999999999999999885 88999998 7

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=82.14  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=36.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4778888888888888888888888888888885 78888887 6

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.96  E-value=3e-10  Score=81.56  Aligned_cols=43  Identities=28%  Similarity=0.431  Sum_probs=37.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      .|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3778888999999999999999999999999885 88999987 6

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=82.35  Aligned_cols=43  Identities=23%  Similarity=0.428  Sum_probs=34.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4677788888888888888888888888888774 77888887 6

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=81.91  Aligned_cols=43  Identities=26%  Similarity=0.432  Sum_probs=36.7

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4778888888888988998898888888888885 78888887 6

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.95  E-value=2e-10  Score=82.34  Aligned_cols=43  Identities=28%  Similarity=0.487  Sum_probs=33.2

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|++++||+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4677777788888888888888888888887774 77788877 6

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.7e-10  Score=81.62  Aligned_cols=43  Identities=26%  Similarity=0.406  Sum_probs=37.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5788888889999999999999999999998885 88888887 5

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=82.13  Aligned_cols=43  Identities=28%  Similarity=0.470  Sum_probs=35.5

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4777888888888888888888888888888885 78888887 6

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.8e-10  Score=81.56  Aligned_cols=43  Identities=26%  Similarity=0.439  Sum_probs=35.7

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4777888888888888888888888888888884 78888887 6

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.4e-10  Score=81.90  Aligned_cols=43  Identities=28%  Similarity=0.433  Sum_probs=33.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      .|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3677778888888888888888888888888774 77888887 6

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=80.81  Aligned_cols=43  Identities=21%  Similarity=0.364  Sum_probs=37.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4778888889999999999999999999998884 78889887 6

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.3e-10  Score=82.00  Aligned_cols=43  Identities=28%  Similarity=0.403  Sum_probs=32.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777777777777777777777777777774 67777776 5

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.3e-10  Score=81.90  Aligned_cols=43  Identities=28%  Similarity=0.434  Sum_probs=33.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4677777788888888888888888888887774 77788877 6

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.5e-10  Score=86.56  Aligned_cols=57  Identities=21%  Similarity=0.416  Sum_probs=52.2

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHHHhCCCceecC--CCCcccChhHHHHHHHHhccc
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD--CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~--Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      +.+++||+|++|++.|. ...|+.|+++++++||+|+  |++.|..+..|..|++.|...
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            34678999999999999 9999999999899999997  999999999999999987643

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=81.30  Aligned_cols=43  Identities=30%  Similarity=0.477  Sum_probs=36.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4778888888899999999999999999998885 78888887 6

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=80.99  Aligned_cols=43  Identities=26%  Similarity=0.454  Sum_probs=34.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4777788888888888888888888888888774 77888887 6

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3e-10  Score=81.51  Aligned_cols=43  Identities=21%  Similarity=0.361  Sum_probs=37.5

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..++.|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5788888899999999999999999999998884 88899987 6

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4e-10  Score=80.71  Aligned_cols=43  Identities=23%  Similarity=0.431  Sum_probs=36.7

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|++++||+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778888888888988988898888888888884 78888887 6

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.1e-10  Score=80.64  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=37.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788888889999999999999999999998884 88899887 6

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.9e-10  Score=80.24  Aligned_cols=43  Identities=26%  Similarity=0.373  Sum_probs=37.2

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788888889999999999999999999998884 88899887 6

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.92  E-value=3.4e-10  Score=81.10  Aligned_cols=43  Identities=30%  Similarity=0.507  Sum_probs=35.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4777888888888888888888888888888884 78888887 6

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.8e-10  Score=81.66  Aligned_cols=43  Identities=19%  Similarity=0.377  Sum_probs=33.5

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4677777888888888888888888888887774 77788877 6

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.92  E-value=2.9e-10  Score=81.34  Aligned_cols=43  Identities=26%  Similarity=0.390  Sum_probs=31.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      .|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3667777777777777777777777777777774 67777776 5

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4e-10  Score=80.71  Aligned_cols=43  Identities=26%  Similarity=0.394  Sum_probs=36.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4778888888999999999999999999998884 88888887 6

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.1e-10  Score=81.28  Aligned_cols=42  Identities=26%  Similarity=0.464  Sum_probs=29.5

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566677777777777777777777777777764 66777776 5

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.9e-10  Score=80.63  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=34.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4777888888888888888888888888888884 77888887 6

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.5e-10  Score=80.14  Aligned_cols=42  Identities=31%  Similarity=0.438  Sum_probs=35.3

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|.++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            677888888888888888888888888888884 88888887 6

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.3e-10  Score=80.06  Aligned_cols=43  Identities=19%  Similarity=0.224  Sum_probs=35.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      .|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3677888888888888888888888888888884 78888887 6

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.7e-10  Score=80.87  Aligned_cols=43  Identities=23%  Similarity=0.410  Sum_probs=32.5

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4667777777778877888887777777777774 77777776 5

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5e-10  Score=80.20  Aligned_cols=43  Identities=26%  Similarity=0.454  Sum_probs=36.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4778888888888888988888888888888884 78888887 6

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.90  E-value=4.2e-10  Score=80.77  Aligned_cols=42  Identities=19%  Similarity=0.301  Sum_probs=31.6

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566777777777777777777777777777774 67777776 5

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.4e-10  Score=79.26  Aligned_cols=42  Identities=26%  Similarity=0.354  Sum_probs=34.2

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|++++||+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            567788888888888888888888888888884 77888887 6

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.8e-10  Score=80.81  Aligned_cols=43  Identities=26%  Similarity=0.454  Sum_probs=36.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4778888888888888888888888888888884 88888887 6

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.4e-10  Score=81.08  Aligned_cols=43  Identities=28%  Similarity=0.531  Sum_probs=34.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4777888888888888888888888888888774 77888887 6

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.9e-11  Score=95.14  Aligned_cols=59  Identities=15%  Similarity=0.236  Sum_probs=54.5

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      +++||+|++|++.|.....|..                    +++|.|++|       ++.|.....|.+|+++|+++++
T Consensus        15 ~~~~~~C~~C~k~f~~~~~l~~--------------------~~~~~C~~C-------~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A           15 GDRSQKCSKCGIIFIRRSTLSR--------------------RKTPMCEKC-------RKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCSEEECSSSCCEEECCCCCCC--------------------SSSCCCHHH-------HHTCSCCCSSCCCSSCCCCCCC
T ss_pred             CCCCeeCCcccchhCCHHHhCc--------------------CCCCCCCCC-------ChhhcCHHHHHHHHHhhcCCCC
Confidence            6899999999999999887664                    568999998       8999999999999999999999


Q ss_pred             cccCcC
Q 010444           82 WKCDKC   87 (510)
Q Consensus        82 ~~C~~C   87 (510)
                      |+|++|
T Consensus        68 ~~C~~C   73 (73)
T 2ctu_A           68 SGPSSG   73 (73)
T ss_dssp             SSCCCC
T ss_pred             CCCCCC
Confidence            999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.3e-10  Score=80.06  Aligned_cols=42  Identities=21%  Similarity=0.375  Sum_probs=33.7

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|+|.|..+..|++|+++| +++||+|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677788888888888888888888888888874 77888887 6

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.4e-10  Score=79.57  Aligned_cols=42  Identities=31%  Similarity=0.451  Sum_probs=36.8

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|++++||+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678888899999999999999999999999884 88899987 6

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.8e-10  Score=80.14  Aligned_cols=43  Identities=28%  Similarity=0.476  Sum_probs=35.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4778888888888888888888888888888884 78888887 6

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.3e-10  Score=79.94  Aligned_cols=43  Identities=28%  Similarity=0.389  Sum_probs=36.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4778888888888888888888888888888884 78888887 6

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.89  E-value=3.7e-10  Score=80.74  Aligned_cols=43  Identities=23%  Similarity=0.448  Sum_probs=32.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4667777777777777777777777777777774 77777776 5

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.89  E-value=9.3e-10  Score=86.13  Aligned_cols=56  Identities=29%  Similarity=0.648  Sum_probs=34.4

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc--CCccccChhHHHHHHHH
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK--CSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~--CgK~F~~ks~Lk~H~rt  103 (510)
                      ..++|.|++.+|     ++.|.....|++|+++|+++++|+|.+  |++.|..+..|+.|+++
T Consensus        14 ~~~~~~C~~~~C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGC-----GKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTT-----CCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCC-----ccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            456666666111     666666666666666666666666643  66666666666666554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=8.4e-10  Score=82.36  Aligned_cols=44  Identities=16%  Similarity=0.314  Sum_probs=22.3

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhh-hccCCcccccCcCCcccc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCDKCSKKYA   92 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H~geKp~~C~~CgK~F~   92 (510)
                      ..+++|.|++|       ++.|.....|++|++ +|++++||+|++|++.|.
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34455555554       455555555555544 455555555555555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.4e-10  Score=81.87  Aligned_cols=42  Identities=29%  Similarity=0.495  Sum_probs=27.2

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3556666666666666666666666666666663 66666665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.3e-10  Score=80.15  Aligned_cols=43  Identities=19%  Similarity=0.316  Sum_probs=35.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHH-Hh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQK-TC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~r-th-geKpykC~-C  113 (510)
                      .|+++|+++++|+|++|+|.|..+..|+.|++ +| +++||+|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36778888888888888888888888888888 64 77888887 6

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.5e-10  Score=79.41  Aligned_cols=42  Identities=24%  Similarity=0.426  Sum_probs=35.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3778888888899999999999999999998885 78888887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.9e-10  Score=80.40  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=31.5

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667777777777777777777777777777774 67777776 5

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.88  E-value=1.7e-09  Score=84.54  Aligned_cols=55  Identities=18%  Similarity=0.447  Sum_probs=51.0

Q ss_pred             CCCcccccc--cCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC--CCCCCCCCCCccCChhHHHhHhhhc
Q 010444            2 ATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE--PSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus         2 gekpy~C~~--CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      .+++|+|.+  |++.|.....|++|+++|+             .+++|.|++  |       ++.|.....|.+|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHT-------------GEKPFSCSWKGC-------ERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHS-------------SSCSEECCCTTC-------CCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcC-------------CCCCccCCCCCC-------CcccCCHHHHHhHhhcC
Confidence            578999999  9999999999999999997             789999976  7       99999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=79.70  Aligned_cols=42  Identities=26%  Similarity=0.414  Sum_probs=31.7

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            667777777777777777777777777777774 77777776 6

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.4e-10  Score=79.77  Aligned_cols=42  Identities=26%  Similarity=0.405  Sum_probs=32.9

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|+|.|..+..|++|+++| +++||+|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            667777888888888888888888888887774 77788877 6

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.9e-10  Score=79.84  Aligned_cols=42  Identities=29%  Similarity=0.480  Sum_probs=34.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4777888888888888888888888888888884 77888886

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=9e-10  Score=78.85  Aligned_cols=43  Identities=28%  Similarity=0.480  Sum_probs=34.7

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      .|+++|++++||+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3677788888888888888888888888888884 77888887 6

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.85  E-value=8.4e-10  Score=79.13  Aligned_cols=42  Identities=26%  Similarity=0.518  Sum_probs=37.2

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999985 88999886

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.2e-10  Score=78.67  Aligned_cols=42  Identities=31%  Similarity=0.513  Sum_probs=36.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4788889999999999999999999999999885 88999885

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=78.47  Aligned_cols=42  Identities=31%  Similarity=0.495  Sum_probs=37.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|..|+++| +++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999995 88999986

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.1e-10  Score=78.82  Aligned_cols=42  Identities=24%  Similarity=0.460  Sum_probs=35.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778888888999999999999999999998885 78888885

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=78.33  Aligned_cols=42  Identities=19%  Similarity=0.435  Sum_probs=36.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4788899999999999999999999999999885 88999886

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=78.37  Aligned_cols=42  Identities=26%  Similarity=0.465  Sum_probs=36.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788888899999999999999999999998885 88889886

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.3e-09  Score=78.11  Aligned_cols=42  Identities=26%  Similarity=0.473  Sum_probs=37.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788899999999999999999999999999995 88999986

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.84  E-value=1.1e-09  Score=76.79  Aligned_cols=41  Identities=24%  Similarity=0.487  Sum_probs=34.9

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      |+++|+++++|+|++|++.|..+..|+.|+++| +++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567888888999999999999999999998885 88888884

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.2e-10  Score=77.77  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=37.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4788899999999999999999999999999885 88999885

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=7.1e-10  Score=79.41  Aligned_cols=42  Identities=36%  Similarity=0.532  Sum_probs=32.1

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      |+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+ |
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            667777777788877888888777787777774 67777776 6

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.83  E-value=2.6e-10  Score=87.97  Aligned_cols=52  Identities=19%  Similarity=0.341  Sum_probs=40.8

Q ss_pred             HHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHH
Q 010444           69 IKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSF  123 (510)
Q Consensus        69 Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL  123 (510)
                      |..|+++|++++||+|++|++.|.....|.   ++| +++||+|+ |++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            456788888888888888888888887775   554 78888888 88888876544

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.7e-10  Score=78.69  Aligned_cols=42  Identities=26%  Similarity=0.454  Sum_probs=36.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4778888899999999999999999999998885 88889885

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.7e-10  Score=78.67  Aligned_cols=42  Identities=29%  Similarity=0.504  Sum_probs=36.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788888899999999999999999999998885 78888886

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=78.36  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=35.7

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888888899999999999999999998885 78888885

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=78.46  Aligned_cols=42  Identities=31%  Similarity=0.517  Sum_probs=35.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778888888999999999999999999998885 78888885

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=78.45  Aligned_cols=42  Identities=26%  Similarity=0.542  Sum_probs=36.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5778888888999999999999999999998885 78888886

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=77.98  Aligned_cols=42  Identities=24%  Similarity=0.476  Sum_probs=35.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4778888888999999999999999999998885 78888886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1e-09  Score=78.42  Aligned_cols=42  Identities=24%  Similarity=0.461  Sum_probs=34.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4777888888888888888888888888888884 78888875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.2e-09  Score=74.99  Aligned_cols=41  Identities=22%  Similarity=0.361  Sum_probs=36.6

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      |+++|++++||+|++|++.|..+..|+.|+++| +++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            677899999999999999999999999999995 88999884

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.6e-09  Score=77.64  Aligned_cols=42  Identities=31%  Similarity=0.521  Sum_probs=37.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|++++||+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999995 88999986

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=3.5e-09  Score=78.95  Aligned_cols=46  Identities=22%  Similarity=0.326  Sum_probs=42.1

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHH-Hh-CCCceecC-CCCcccCh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQK-TC-GTREYKCD-CGTIFSRR  120 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~r-th-geKpykC~-Cgk~F~~k  120 (510)
                      .|.++++|+|++|++.|..+..|++|++ +| +++||+|+ |++.|.++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            5778999999999999999999999998 66 89999999 99999863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.4e-09  Score=77.90  Aligned_cols=42  Identities=19%  Similarity=0.348  Sum_probs=37.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999995 88999986

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=77.43  Aligned_cols=42  Identities=26%  Similarity=0.444  Sum_probs=36.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4778888889999999999999999999998884 78888885

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=76.08  Aligned_cols=42  Identities=29%  Similarity=0.531  Sum_probs=37.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|..|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999995 88999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.9e-09  Score=75.59  Aligned_cols=41  Identities=20%  Similarity=0.226  Sum_probs=36.5

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            678889999999999999999999999999995 88999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.8e-09  Score=76.37  Aligned_cols=42  Identities=21%  Similarity=0.439  Sum_probs=37.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3778899999999999999999999999999995 88999885

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=77.30  Aligned_cols=40  Identities=33%  Similarity=0.516  Sum_probs=23.7

Q ss_pred             hhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           73 FSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        73 ~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            34555566666666666666666666666553 55666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.2e-09  Score=76.66  Aligned_cols=42  Identities=26%  Similarity=0.499  Sum_probs=37.2

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4788899999999999999999999999999984 88999986

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.6e-09  Score=77.69  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=36.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888889999999999999999999998885 88888886

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.9e-09  Score=76.99  Aligned_cols=42  Identities=29%  Similarity=0.511  Sum_probs=35.8

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888888999999999999999999998884 78888885

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.6e-09  Score=76.84  Aligned_cols=42  Identities=24%  Similarity=0.431  Sum_probs=34.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4777888888888888888888888888888885 77888874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=76.68  Aligned_cols=42  Identities=21%  Similarity=0.408  Sum_probs=38.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|.++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999995 89999996

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.8e-09  Score=77.07  Aligned_cols=42  Identities=26%  Similarity=0.517  Sum_probs=35.5

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778888888888888888888888888888884 78888886

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.6e-09  Score=75.68  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=37.6

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|++++||+|++|++.|..+..|+.|+++| +++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5788899999999999999999999999999995 88999884

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=4e-09  Score=75.19  Aligned_cols=40  Identities=20%  Similarity=0.447  Sum_probs=26.6

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CC
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CG  114 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cg  114 (510)
                      .|+++|||+|++|+|.|..+..|+.|+++| ++++|.|+ |+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            456666666766777776666676666663 66666666 64

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2e-09  Score=76.15  Aligned_cols=42  Identities=26%  Similarity=0.442  Sum_probs=37.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .|+++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788899999999999999999999999999985 88999985

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.2e-09  Score=76.76  Aligned_cols=39  Identities=15%  Similarity=0.204  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            8 TGEKPYECSVC-------GKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECSSS-------CCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCCeeCCCc-------CCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.75  E-value=3.7e-09  Score=73.84  Aligned_cols=40  Identities=20%  Similarity=0.510  Sum_probs=35.7

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      |+++|+++++|+|++|++.|..+..|+.|+++| +++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            677888999999999999999999999999984 8899988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.1e-09  Score=75.98  Aligned_cols=40  Identities=20%  Similarity=0.263  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            7 GTGKKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCBCTTT-------CCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCcCeECCCC-------CCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.2e-09  Score=76.08  Aligned_cols=39  Identities=18%  Similarity=0.210  Sum_probs=37.3

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            8 TGGKHFECTEC-------GKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCEECSSS-------CCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCCeECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999988

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=74.57  Aligned_cols=40  Identities=23%  Similarity=0.467  Sum_probs=35.7

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      |+++|++++||+|++|++.|..+..|+.|+++| +++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            678889999999999999999999999999984 8899987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=76.06  Aligned_cols=39  Identities=21%  Similarity=0.319  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            8 TGEKPFDCIDC-------GKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCTTT-------CCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCeECCCC-------CceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48899999999       9999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.3e-09  Score=75.84  Aligned_cols=39  Identities=18%  Similarity=0.186  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            8 TGEKPYKCEEC-------GKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSS-------CCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCcCccCCCc-------cchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48899999999       9999999999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.74  E-value=2.3e-09  Score=76.85  Aligned_cols=39  Identities=23%  Similarity=0.291  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            8 TGEKPYECKEC-------GKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCBCSSS-------CCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCceECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=3.5e-09  Score=75.74  Aligned_cols=40  Identities=15%  Similarity=0.231  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            7 GMGEKTWKCREC-------DMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCCCSSS-------CCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCCCcCeECCCC-------CcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            348999999999       9999999999999999999999999998

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=76.52  Aligned_cols=41  Identities=32%  Similarity=0.488  Sum_probs=33.6

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            667788888888888888888888888888884 77888886

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.73  E-value=2.4e-09  Score=79.70  Aligned_cols=51  Identities=18%  Similarity=0.179  Sum_probs=47.2

Q ss_pred             CCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCcee
Q 010444           60 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYK  110 (510)
Q Consensus        60 ~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpyk  110 (510)
                      ++.|.....|..|+++|+++++|.|++|++.|...+.|..|+++| +++||+
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            678888899999999999999999999999999999999999995 888874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.5e-09  Score=76.52  Aligned_cols=42  Identities=19%  Similarity=0.320  Sum_probs=38.2

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|++++||+|++|++.|..+..|+.|+++| +++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888999999999999999999999999999995 88999986

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.6e-09  Score=76.29  Aligned_cols=39  Identities=13%  Similarity=0.076  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            8 TGEKPHECREC-------GKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCBCTTT-------CCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCCeeCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48999999999       9999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.1e-09  Score=75.97  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            8 TGEKPYKCNEC-------GKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSEECSSS-------CCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCeECCCC-------CchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            48999999999       9999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.7e-09  Score=75.71  Aligned_cols=40  Identities=15%  Similarity=0.188  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|..+..|.+|+++|++++||+|++|
T Consensus         7 h~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDC-------GKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSS-------CCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCeeCccc-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.9e-09  Score=75.36  Aligned_cols=41  Identities=22%  Similarity=0.485  Sum_probs=34.3

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      +|+++|+++++|+|++|++.|..+..|..|+++| +++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3777888888888888888888888888888884 7888887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.2e-09  Score=75.78  Aligned_cols=39  Identities=21%  Similarity=0.278  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            8 TGEKLYNCKEC-------GKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCBTTT-------TBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCeECCCC-------CCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.2e-09  Score=75.47  Aligned_cols=41  Identities=27%  Similarity=0.457  Sum_probs=36.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      .|+++|+++++|+|++|++.|..++.|+.|+++| +++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4788899999999999999999999999999885 8888887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.5e-09  Score=76.37  Aligned_cols=42  Identities=29%  Similarity=0.531  Sum_probs=37.0

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999885 88999886

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.6e-09  Score=75.80  Aligned_cols=40  Identities=20%  Similarity=0.252  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            7 GAGEKPYGCSEC-------GKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSCBCSSS-------CCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCCCCCcCCCcc-------ChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            348999999998       9999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.73  E-value=3.7e-09  Score=75.56  Aligned_cols=39  Identities=18%  Similarity=0.261  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            8 TGEKRYKCNEC-------GKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTSCCEECSSS-------CCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCcCcCCCCC-------cchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48999999999       9999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.9e-09  Score=76.16  Aligned_cols=39  Identities=21%  Similarity=0.234  Sum_probs=37.3

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            8 TGEKPYICAEC-------GKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECSSS-------CCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCcCeECCCC-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999998       9999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2.7e-09  Score=76.21  Aligned_cols=40  Identities=15%  Similarity=0.161  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         7 H~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            7 GSGEKSHTCDEC-------GKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCSSEECTTT-------CCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCCeECCCc-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.3e-09  Score=76.71  Aligned_cols=39  Identities=21%  Similarity=0.290  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            8 TGVKPYMCNEC-------GKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSS-------CCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCCcCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.72  E-value=3.5e-09  Score=75.55  Aligned_cols=40  Identities=15%  Similarity=0.122  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQC-------AKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSS-------SCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCceECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.3e-09  Score=76.63  Aligned_cols=39  Identities=28%  Similarity=0.357  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            8 TGERPYICTVC-------GKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECTTT-------CCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCcCCCCC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48899999999       9999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.72  E-value=4e-09  Score=75.26  Aligned_cols=39  Identities=21%  Similarity=0.218  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            8 TGEKPYNCKEC-------GKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSS-------CCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCcCeECCcc-------ccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            48899999998       9999999999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.5e-09  Score=75.69  Aligned_cols=40  Identities=18%  Similarity=0.220  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            7 GTGEKPYKCHEC-------GKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCEECTTT-------CCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.3e-09  Score=75.69  Aligned_cols=39  Identities=18%  Similarity=0.146  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            8 TGERPHKCNEC-------GKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSS-------CCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCCeeCCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.7e-09  Score=76.34  Aligned_cols=40  Identities=20%  Similarity=0.203  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            7 GTGENPYECHEC-------GKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEECSSS-------CCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCcCcCCCCC-------CcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999998       9999999999999999999999999998

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.5e-09  Score=75.87  Aligned_cols=41  Identities=27%  Similarity=0.499  Sum_probs=34.2

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      |+++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667788888888888888888888888888884 78888886

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.5e-09  Score=74.99  Aligned_cols=39  Identities=13%  Similarity=0.076  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCC-------EKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSS-------SCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.8e-09  Score=76.10  Aligned_cols=39  Identities=13%  Similarity=0.227  Sum_probs=37.3

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            8 TGEKPYKCSDC-------GKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SSCCSCBCSSS-------CCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCccCCcc-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48899999998       9999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.72  E-value=3.1e-09  Score=76.12  Aligned_cols=40  Identities=15%  Similarity=0.243  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            7 GTGEKPFKCVEC-------GKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCSSS-------CCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCcccCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999998

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5.9e-09  Score=74.78  Aligned_cols=40  Identities=25%  Similarity=0.493  Sum_probs=33.8

Q ss_pred             hhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           73 FSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        73 ~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +++|+++++|+|++|+|.|..+..|+.|+++| ++|||+|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            56788888888888888888888888888885 78888886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=3.2e-09  Score=74.47  Aligned_cols=40  Identities=20%  Similarity=0.432  Sum_probs=33.7

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      |+++|++++||+|++|++.|..++.|+.|+++| +++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            677888888888888888888888888888884 7888887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.7e-09  Score=74.90  Aligned_cols=39  Identities=21%  Similarity=0.281  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            8 SGEKPYVCDYC-------GKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSS-------CCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCeECCCC-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48899999998       9999999999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.4e-09  Score=75.67  Aligned_cols=39  Identities=15%  Similarity=0.197  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            8 TGEKPYKCNEC-------GKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEETTT-------TEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCeECCCc-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48999999999       9999999999999999999999999998

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.9e-09  Score=75.09  Aligned_cols=41  Identities=22%  Similarity=0.318  Sum_probs=30.4

Q ss_pred             hhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-C
Q 010444           73 FSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-C  113 (510)
Q Consensus        73 ~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-C  113 (510)
                      +++|.++++|+|++|+|.|..+..|+.|+++| +++||+|+ |
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45677777777777777777777777777774 77777776 5

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.4e-09  Score=75.16  Aligned_cols=39  Identities=15%  Similarity=0.203  Sum_probs=37.3

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            8 TGEKPYECSIC-------GKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSS-------CCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCcCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4e-09  Score=75.38  Aligned_cols=39  Identities=18%  Similarity=0.292  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            8 SGEKPYKCNEC-------GKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSEECSSS-------CCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCCEeCCcC-------CCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.1e-09  Score=75.22  Aligned_cols=39  Identities=21%  Similarity=0.309  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            8 TGEKPYKCNEC-------GKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCTTCCTTT-------CCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            48999999999       9999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4e-09  Score=75.40  Aligned_cols=40  Identities=18%  Similarity=0.209  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            7 GSGEKPYKCSEC-------GKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSS-------CCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cCCCcCeECCCC-------CCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.9e-09  Score=75.48  Aligned_cols=40  Identities=15%  Similarity=0.214  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGEC-------GKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTT-------CCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.3e-09  Score=75.21  Aligned_cols=40  Identities=10%  Similarity=0.129  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            7 GTGEKPFKCDIC-------GKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSCCCSSS-------CCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCcCCCcC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.4e-09  Score=75.33  Aligned_cols=39  Identities=18%  Similarity=0.157  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            8 SSTKSHQCHEC-------GRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSEECSSS-------CCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCeECCcC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            48899999998       9999999999999999999999999998

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.5e-09  Score=73.66  Aligned_cols=39  Identities=21%  Similarity=0.473  Sum_probs=36.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEP   52 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C   52 (510)
                      +++++|+|++|++.|.+...|++|+++|+             ++++|+|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ep0_A            8 TGEKPYKCDVCHKSFRYGSSLTVHQRIHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             TTCCSEECSSSCCEESSHHHHHHHHTTTS-------------SSCCCSCCCC
T ss_pred             CCCCCeeCcccCcccCChHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            36899999999999999999999999997             7899999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.6e-09  Score=75.66  Aligned_cols=39  Identities=23%  Similarity=0.297  Sum_probs=37.0

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|..+..|.+|+++|++++||+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            8 TGEKPYRCAEC-------GKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSS-------CCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48999999998       9999999999999999999999999986

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=4.8e-09  Score=74.98  Aligned_cols=40  Identities=15%  Similarity=0.145  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEEC-------GKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSS-------CCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCcCCCCC-------CCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.8e-09  Score=75.54  Aligned_cols=40  Identities=13%  Similarity=0.193  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         7 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            7 GTGEKPYKCEKC-------GKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSSCCSEEETTT-------TEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCeECCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.9e-09  Score=86.89  Aligned_cols=65  Identities=23%  Similarity=0.446  Sum_probs=56.3

Q ss_pred             hHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHhCCCceecC-CCCcccChhHHHHHHHHhccc
Q 010444           67 TGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus        67 s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeKpykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      ..|..|+++|.++|++.|.+|++.|. ...|..|...++++||.|+ |++.|.+ ..|..|++.|...
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEET-TGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCcH-HHHHHHHHHccCC
Confidence            35778999999999999999999994 9999999943799999999 9999885 8899999988654

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=4e-09  Score=75.65  Aligned_cols=40  Identities=20%  Similarity=0.307  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|++|+++|++++||+|++|
T Consensus         7 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            7 GTGEKPYKCMEC-------GKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSCCSSSBTTT-------TBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCcCCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.7e-09  Score=75.58  Aligned_cols=40  Identities=15%  Similarity=0.208  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            7 GTGEKPYKCNEC-------GKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEECSSS-------CCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCeECCcC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            348999999998       9999999999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.68  E-value=6e-09  Score=74.61  Aligned_cols=40  Identities=13%  Similarity=0.088  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQC-------EKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSS-------SCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=5.4e-09  Score=74.71  Aligned_cols=40  Identities=15%  Similarity=0.134  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|.+|
T Consensus         7 H~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            7 GSREKSHQCREC-------GEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SSCCCCEECTTT-------CCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cCCCCCEEcccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            348899999999       9999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.5e-09  Score=74.67  Aligned_cols=39  Identities=15%  Similarity=0.219  Sum_probs=37.3

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            8 SGEKPFKCEEC-------GKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEEETTT-------TEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCeeCCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999998       9999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=9.6e-09  Score=73.16  Aligned_cols=39  Identities=21%  Similarity=0.490  Sum_probs=36.8

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEP   52 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C   52 (510)
                      ++++||+|++|++.|.++..|++|+++|+             ++++|.|++|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~c   44 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHD-------------GSVGKSGPSS   44 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHS-------------CCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHcc-------------CCCCCCCcCC
Confidence            47899999999999999999999999997             8899999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.7e-09  Score=75.16  Aligned_cols=39  Identities=23%  Similarity=0.327  Sum_probs=37.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            8 SGERPYGCNEC-------GKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             SCCCCEECSSS-------CCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCEEcccc-------CcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            48999999999       9999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.1e-09  Score=74.72  Aligned_cols=40  Identities=13%  Similarity=0.062  Sum_probs=37.7

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            7 GTGEKPCKCTEC-------GKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSS-------CCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCCeeCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=3.3e-09  Score=75.11  Aligned_cols=42  Identities=19%  Similarity=0.294  Sum_probs=37.4

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      +|+++|++++||+|++|++.|.....|+.|+++| +++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999995 88999884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=4.9e-09  Score=75.06  Aligned_cols=42  Identities=21%  Similarity=0.380  Sum_probs=33.9

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-C-CCceecC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-G-TREYKCD  112 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-g-eKpykC~  112 (510)
                      .|+++|++++||+|++|++.|..+..|+.|+++| + ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3677888888888888888888888888888885 6 7888874

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.6e-09  Score=75.09  Aligned_cols=40  Identities=18%  Similarity=0.213  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            7 GSGEKPYGCNEC-------GKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEEETTT-------TEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cCCCcCeECCCC-------CcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5.4e-09  Score=74.84  Aligned_cols=40  Identities=18%  Similarity=0.152  Sum_probs=37.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         7 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVEC-------GKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSS-------CCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECccc-------CchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.1e-08  Score=74.03  Aligned_cols=38  Identities=26%  Similarity=0.520  Sum_probs=36.1

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCC
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEP   52 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C   52 (510)
                      ++++|+|++|++.|.+...|++|+++|+             .+++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSSGPS   46 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCCCSCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcC-------------CCCCccCCCC
Confidence            6899999999999999999999999997             8899999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.1e-08  Score=74.06  Aligned_cols=41  Identities=17%  Similarity=0.298  Sum_probs=32.1

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSK   89 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK   89 (510)
                      ..+++|.|++|       ++.|.....|.+|+++|++++||+|++|+|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTT-------TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCC-------CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            46677888887       788888888888888888888888888875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.5e-09  Score=73.79  Aligned_cols=39  Identities=21%  Similarity=0.325  Sum_probs=36.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEP   52 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C   52 (510)
                      +++++|+|++|++.|.+...|++|+++|+             ++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHT-------------REKPSGPSSG   46 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHH-------------HCCCCSCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcC-------------CCCCCCCCCC
Confidence            36899999999999999999999999997             7899999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.8e-09  Score=74.33  Aligned_cols=40  Identities=23%  Similarity=0.503  Sum_probs=28.9

Q ss_pred             hhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           73 FSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        73 ~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .++|+++++|+|++|+|.|..+..|+.|+++| +++||+|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            45677777777777777777777777777774 67777774

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.8e-09  Score=73.92  Aligned_cols=40  Identities=25%  Similarity=0.301  Sum_probs=37.6

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhh-hccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|++|++ +|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            7 GTGKKPYECIEC-------GKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCSBCCSSS-------CCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cCCCCCEECCcc-------CchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            348899999998       999999999999999 9999999999998

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.2e-09  Score=74.15  Aligned_cols=40  Identities=20%  Similarity=0.442  Sum_probs=23.2

Q ss_pred             hhhccCCcccccC--cCCccccChhHHHHHHHHh-CCCceecC
Q 010444           73 FSRKHGEKKWKCD--KCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        73 ~r~H~geKp~~C~--~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      .++|+++++|+|.  +|++.|..+..|+.|+++| ++|||+|+
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3455555666665  5666666666666666553 55566655

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.5e-09  Score=73.81  Aligned_cols=40  Identities=18%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++|
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKEC-------GKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCEECCcC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            348899999998       9999999999999999999999999986

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.62  E-value=2e-09  Score=82.90  Aligned_cols=48  Identities=13%  Similarity=0.273  Sum_probs=42.5

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHH
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWK   98 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk   98 (510)
                      |.++++|.|++|       ++.|.....|.   ++|++++||+|++|++.|.....+.
T Consensus         9 H~~~k~~~C~~C-------~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            9 STNRASFKCPVC-------SSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCSSSEEECSSS-------CCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             cCCCCCccCCCC-------CchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            348999999999       99999988887   8899999999999999999877653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.58  E-value=3.3e-08  Score=69.86  Aligned_cols=39  Identities=15%  Similarity=0.398  Sum_probs=29.4

Q ss_pred             hhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD  112 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~  112 (510)
                      ++|+++++|+|++|++.|..+..|+.|+++| +++||+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4567777788888888888888888887774 77777774

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.57  E-value=3.4e-08  Score=69.82  Aligned_cols=38  Identities=16%  Similarity=0.343  Sum_probs=35.0

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      +++++|+|++|++.|.++..|++|+++|+             ++++|.|++
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   43 (43)
T 2yrm_A            6 SGNGAFFCNECDCRFSEEASLKRHTLQTH-------------SDKSGPSSG   43 (43)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHHHHHT-------------CTTCSSSCC
T ss_pred             CCCCCEECCCCCCeeCChHHHHHHHHhhC-------------CCCCccCCC
Confidence            37899999999999999999999999997             789999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=3e-08  Score=70.52  Aligned_cols=38  Identities=26%  Similarity=0.450  Sum_probs=34.9

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      +++++|+|++|++.|.++..|++|+++|+             ++++|.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQRIHT-------------GEKSGPSSG   45 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHHTTTS-------------SCCCCCSCC
T ss_pred             CCCcCccCCCCCCccCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            36899999999999999999999999997             789999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.9e-08  Score=70.38  Aligned_cols=38  Identities=24%  Similarity=0.289  Sum_probs=35.1

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      +++++|+|++|++.|.++..|++|+++|+             ++++|.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2eom_A            8 HGERGHRCSDCGKFFLQASNFIQHRRIHT-------------GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSCCCCSSHHHHHHHHHHHS-------------SCCCSSCCC
T ss_pred             CCCCCcCCCCCCCeeCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            36899999999999999999999999997             889999975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.3e-08  Score=71.49  Aligned_cols=38  Identities=24%  Similarity=0.271  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            8 TGQRPYECIEC-------GKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSEECSSS-------CCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.5e-08  Score=69.44  Aligned_cols=38  Identities=18%  Similarity=0.522  Sum_probs=25.8

Q ss_pred             hhccCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      ++|+++++|+|++|++.|..+..|+.|+++| +++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3566667777777777777777777776663 6667666

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.1e-08  Score=71.41  Aligned_cols=38  Identities=13%  Similarity=0.218  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            8 TGEKPYECSDC-------GKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SSCCSSCCSSS-------CCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCcCCCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.6e-08  Score=71.13  Aligned_cols=39  Identities=18%  Similarity=0.259  Sum_probs=36.2

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            7 GTGEKPYKCNEC-------GKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCBCSSS-------CCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCCcCeECCCC-------CcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            348999999999       999999999999999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.6e-08  Score=71.07  Aligned_cols=38  Identities=18%  Similarity=0.273  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            8 TGENPFICSEC-------GKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CSCCSCBCTTT-------CCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCEECCcc-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999       999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.7e-08  Score=71.21  Aligned_cols=39  Identities=18%  Similarity=0.245  Sum_probs=36.3

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|++|+++|++++||+|++
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            7 GTGEKPYKCQVC-------GKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSS-------CCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCcccCCCCC-------CcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            348899999999       999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.53  E-value=2.4e-08  Score=71.40  Aligned_cols=39  Identities=15%  Similarity=0.222  Sum_probs=36.2

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAEC-------GKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSS-------SCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCEECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            348999999999       999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.9e-08  Score=70.67  Aligned_cols=38  Identities=21%  Similarity=0.329  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            8 TGEKPYICNEC-------GKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCSEECSSS-------CCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCcCEECCCC-------ChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            48999999998       999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.5e-08  Score=71.06  Aligned_cols=38  Identities=21%  Similarity=0.266  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|++
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            8 TGEKPYNCEEC-------GKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCSEECTTT-------CCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCccCCCC-------CCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48899999999       999999999999999999999999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=71.15  Aligned_cols=38  Identities=24%  Similarity=0.289  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            8 TGERHYECSEC-------GKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECSSS-------CCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCCeECCcC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999998       999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3e-08  Score=70.72  Aligned_cols=38  Identities=21%  Similarity=0.320  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            8 TGGKPYQCNEC-------GKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCSSSCCSS-------CCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            48999999998       999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.8e-08  Score=70.81  Aligned_cols=38  Identities=18%  Similarity=0.275  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            8 TGEKPFECSEC-------QKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSEECSSS-------CCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999998       999999999999999999999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=70.86  Aligned_cols=38  Identities=21%  Similarity=0.307  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            8 TGEKPYKCNEC-------GKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECTTS-------CCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCeecccc-------CChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.2e-08  Score=70.57  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|+.
T Consensus         8 ~~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            8 TGERHYECSEC-------GKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SSCCCEECSSS-------CCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCCC-------CcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            48999999998       999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.52  E-value=3.2e-08  Score=69.10  Aligned_cols=37  Identities=19%  Similarity=0.253  Sum_probs=35.0

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            6 SGENPYECSEC-------GKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSCCSEECSSS-------CCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCccCCCc-------ChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            48899999998       99999999999999999999999995

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.4e-08  Score=70.56  Aligned_cols=38  Identities=16%  Similarity=0.240  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            8 SGEKPFQCEEC-------GKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSBCCSSS-------CCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCcCCCCCCC-------CcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            48899999998       999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.4e-08  Score=70.60  Aligned_cols=38  Identities=16%  Similarity=0.285  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            8 MGEKCYKCDVC-------GKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCBCSSS-------CCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.8e-08  Score=70.90  Aligned_cols=39  Identities=18%  Similarity=0.270  Sum_probs=36.2

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            7 GTGEKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCTTCCSSS-------CCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCcCeECCCC-------CcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            348999999999       999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.1e-08  Score=70.67  Aligned_cols=38  Identities=18%  Similarity=0.270  Sum_probs=35.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            8 TGEKPYECKVC-------SKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCcCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999998       999999999999999999999999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.3e-08  Score=70.40  Aligned_cols=38  Identities=21%  Similarity=0.319  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            8 TGEKPYRCGEC-------GKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECSSS-------CCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.50  E-value=1.9e-08  Score=74.81  Aligned_cols=52  Identities=13%  Similarity=0.171  Sum_probs=47.9

Q ss_pred             CcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccc
Q 010444           12 NKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWK   83 (510)
Q Consensus        12 gK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~   83 (510)
                      +|.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-------------~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-------------SEQPATCPIC-------YAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-------------SSCCEECTTT-------CCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHhccCCCCC
Confidence            467888899999999997             8899999999       999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.5e-08  Score=70.51  Aligned_cols=39  Identities=18%  Similarity=0.282  Sum_probs=36.2

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|++
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            7 GAGKKLFKCNEC-------KKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCBCTTT-------CCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCEECCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            348999999999       999999999999999999999999975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.4e-08  Score=70.47  Aligned_cols=38  Identities=21%  Similarity=0.294  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|+.
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            8 TGEKPYKCNEC-------GKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCTTT-------TCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCCeECCcC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.3e-08  Score=70.63  Aligned_cols=39  Identities=18%  Similarity=0.268  Sum_probs=36.1

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            7 GSGKKPYECKEC-------RKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCSCCCSSS-------CCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             cCCCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            348899999999       999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=4.2e-08  Score=68.38  Aligned_cols=37  Identities=14%  Similarity=0.178  Sum_probs=34.9

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|.
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            6 SGEKPYSCAEC-------KETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSCCSCBCTTT-------CCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCCeECCCC-------CCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            48899999999       99999999999999999999999984

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=6.2e-08  Score=67.38  Aligned_cols=36  Identities=25%  Similarity=0.452  Sum_probs=33.2

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYIC   49 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C   49 (510)
                      ++++||+|++|++.|.....|+.|+++|+             ++++|.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C   41 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHT-------------GSGPSSG   41 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCC-------------CCSCSCC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhC-------------CCCCcCC
Confidence            47899999999999999999999999997             7888887

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=2.9e-08  Score=70.97  Aligned_cols=38  Identities=18%  Similarity=0.370  Sum_probs=35.7

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|+.
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            8 TGEKPYKCSDC-------GKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CSCCCEECSSS-------CCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CCCCCEECccc-------CCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            48999999999       999999999999999999999999973

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=2.4e-08  Score=71.38  Aligned_cols=38  Identities=13%  Similarity=0.134  Sum_probs=35.8

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            8 TGEKPYSCNVC-------GKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SSCCSEEETTT-------TEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCCeECccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999999       999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=4.5e-08  Score=68.91  Aligned_cols=38  Identities=18%  Similarity=0.256  Sum_probs=35.4

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|+
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNEC-------GKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSSSCCTTT-------CCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCcCeECCCC-------CCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            348899999999       99999999999999999999999995

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=5.4e-08  Score=68.50  Aligned_cols=38  Identities=18%  Similarity=0.274  Sum_probs=35.4

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|+
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNEC-------QKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSEECTTT-------CCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCeECCCC-------CcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            348999999999       99999999999999999999999995

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=5.5e-08  Score=69.50  Aligned_cols=39  Identities=18%  Similarity=0.254  Sum_probs=36.1

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|+.
T Consensus         7 h~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            7 GTGEKPYECDVC-------RKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCBCTTT-------CCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             cCCCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            348899999999       999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.1e-08  Score=69.24  Aligned_cols=37  Identities=14%  Similarity=0.205  Sum_probs=35.1

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            8 TGENPYECCEC-------GKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSCCSCEETTT-------TEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCCcCeeCCCC-------CCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            48899999999       99999999999999999999999995

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=6.5e-08  Score=68.30  Aligned_cols=37  Identities=8%  Similarity=0.113  Sum_probs=35.0

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|+
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            8 HTRKRYECSKC-------QATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSSEECTTT-------CCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            48899999999       99999999999999999999999995

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=2.1e-08  Score=83.52  Aligned_cols=53  Identities=13%  Similarity=0.260  Sum_probs=37.6

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|..|.+    ...|..|.++|
T Consensus        20 H~~~kpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~   72 (88)
T 1x6f_A           20 RLQNSTYQCKHC-------DSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYA   72 (88)
T ss_dssp             CCCCSCEECSSS-------CCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCC
T ss_pred             cCCCCCCcCCCC-------CCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccc
Confidence            346778888887       788888888888888888888888876654    33444445543

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=5.2e-08  Score=67.88  Aligned_cols=36  Identities=14%  Similarity=0.212  Sum_probs=34.4

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccccc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C   84 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|
T Consensus         7 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            7 GGEKPYRCDQC-------GKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CSCCSBCCTTT-------TCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCCeeCCCc-------cchhCCHHHHHHHHHHhCCCCCCCC
Confidence            48999999999       9999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=3.8e-08  Score=70.32  Aligned_cols=39  Identities=18%  Similarity=0.272  Sum_probs=36.1

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|+++++|+|++
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            7 GSGERPFKCNEC-------GKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             SSCCCSCCCSSS-------CCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCCCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            348999999998       999999999999999999999999974

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=5.1e-08  Score=69.64  Aligned_cols=38  Identities=8%  Similarity=0.114  Sum_probs=35.7

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccC-CcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHG-EKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g-eKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++ ++||+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            8 QKEKCFKCNKC-------EKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCSCCEECSSS-------CCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCCEECcCC-------CCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            48899999999       9999999999999999999 99999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=3.9e-08  Score=69.49  Aligned_cols=38  Identities=8%  Similarity=0.092  Sum_probs=35.4

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|+++++|+|.
T Consensus         7 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKC-------DRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSEECSSS-------SCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             cCCCCCeECCCC-------CchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            348999999998       99999999999999999999999994

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=6.1e-08  Score=67.76  Aligned_cols=37  Identities=16%  Similarity=0.219  Sum_probs=34.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccccc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C   84 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|
T Consensus         6 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEIC-------GTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSSSCCBCCSSS-------CCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cCCCCCEECCCC-------CCccCCHHHHHHHHHhcCCCCCCCC
Confidence            348899999998       9999999999999999999999998

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.3e-08  Score=81.86  Aligned_cols=53  Identities=23%  Similarity=0.469  Sum_probs=48.7

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ..++++.|++|       ++.| ....|..|+ .|.+++||.|+.|++.|. ...|..|+++|
T Consensus        13 c~~r~~~C~~C-------~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A           13 CPLRLAVCQHC-------DLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CCCCCEECSSS-------CCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHB
T ss_pred             CCCcccCCccc-------ChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHc
Confidence            48999999998       8999 499999999 899999999999999988 58999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=6.1e-08  Score=67.66  Aligned_cols=37  Identities=11%  Similarity=0.167  Sum_probs=34.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccccc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C   84 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|
T Consensus         6 H~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETC-------GARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTT-------CCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCc-------ChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            348999999999       9999999999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.41  E-value=7.3e-08  Score=67.10  Aligned_cols=37  Identities=8%  Similarity=0.096  Sum_probs=34.8

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccccc
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C   84 (510)
                      +.++++|.|++|       ++.|.....|++|+++|++++||+|
T Consensus         6 H~~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQC-------GKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSSCCEECSSS-------CCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCeECCCC-------CcccCCHHHHHHHhhhcCCCCCCCC
Confidence            348899999999       9999999999999999999999998

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.9e-07  Score=66.85  Aligned_cols=40  Identities=10%  Similarity=0.140  Sum_probs=37.3

Q ss_pred             ccccceeeCC--CCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcC
Q 010444           41 EVRKRVYICP--EPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKC   87 (510)
Q Consensus        41 ~~~ekpy~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~C   87 (510)
                      |.++++|.|+  .|       ++.|.....|.+|+++|++++||+|.+|
T Consensus         7 H~~~k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGC-------GWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSC-------CCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4589999998  77       9999999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=8.6e-08  Score=67.80  Aligned_cols=38  Identities=16%  Similarity=0.144  Sum_probs=35.5

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      +..+++|.|++|       ++.|.....|.+|+++|++++||+|+
T Consensus         7 h~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQEC-------GKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTT-------CCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCC-------CcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            348899999999       99999999999999999999999995

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=6.4e-08  Score=68.89  Aligned_cols=38  Identities=16%  Similarity=0.257  Sum_probs=35.7

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|+.
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            8 TGEKPYECNQC-------GKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSEETTT-------TEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCeECCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999       999999999999999999999999973

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=5.9e-08  Score=69.21  Aligned_cols=37  Identities=11%  Similarity=0.113  Sum_probs=35.2

Q ss_pred             cccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           42 VRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        42 ~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      .++++|.|++|       ++.|.....|.+|+++|++++||+|+
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            8 TGEKPFQCKEC-------GMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSEECSSS-------CCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCCeeCccc-------ChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            48999999998       99999999999999999999999996

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.37  E-value=1.5e-07  Score=64.80  Aligned_cols=35  Identities=11%  Similarity=0.309  Sum_probs=19.6

Q ss_pred             cCCcccccCcCCccccChhHHHHHHHHh-CCCceec
Q 010444           77 HGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKC  111 (510)
Q Consensus        77 ~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC  111 (510)
                      +++++|+|++|++.|...+.|+.|+++| +++||.|
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4455555655666665555565555553 5555543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.34  E-value=2.2e-07  Score=63.93  Aligned_cols=36  Identities=25%  Similarity=0.528  Sum_probs=32.4

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYIC   49 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C   49 (510)
                      ++++||+|++|++.|.....|+.|+++|+             ++++|.|
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHR-------------RDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTC-------------CSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcC-------------CCcccee
Confidence            47899999999999999999999999997             6777765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=1.5e-07  Score=66.59  Aligned_cols=38  Identities=16%  Similarity=0.072  Sum_probs=35.1

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            7 GSGEKPYECNEC-------GKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCSEECSSS-------CCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             cCCCcCeECCCC-------CcccCchHHHHHHHhHhcCCCCCCCC
Confidence            348999999999       99999999999999999999999883

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=9.1e-08  Score=67.53  Aligned_cols=38  Identities=13%  Similarity=0.210  Sum_probs=35.3

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCD   85 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~   85 (510)
                      +.++++|.|++|       ++.|.....|.+|+++|++++||+|.
T Consensus         7 H~~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNEC-------GKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCEEETTT-------TEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCeECccc-------CcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            348899999999       99999999999999999999999984

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=6.6e-08  Score=80.45  Aligned_cols=58  Identities=10%  Similarity=0.310  Sum_probs=46.5

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CCCceecC-CCCcccChhHHHHHHHHhcc
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTREYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKpykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      .|.++|+++++|+|++|++.|.....|+.|+++| +++||+|. |.+    +..|..|.+.|.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            3456799999999999999999999999999995 89999997 653    4444555555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=6.1e-07  Score=72.25  Aligned_cols=38  Identities=26%  Similarity=0.350  Sum_probs=34.2

Q ss_pred             CCCCcccccc--cCcccCChHHHHHHH-HhcCCCcccccccccccccceeeCCC
Q 010444            1 MATNRFVCEI--CNKGFQRDQNLQLHR-RGHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~Lk~H~-r~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      ++||||+|.+  |+|.|.+..+|++|+ ++|+             ++|||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT-------------gEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK-------------SDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS-------------SCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCC-------------CCCCccccc
Confidence            4899999976  999999999999997 6897             899999876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=4.1e-07  Score=61.46  Aligned_cols=35  Identities=23%  Similarity=0.377  Sum_probs=28.1

Q ss_pred             hhccCCcccccCcCCccccChhHHHHHHHHh-CCCc
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTRE  108 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKp  108 (510)
                      ++|+++++|+|++|++.|..+..|+.|+++| ++||
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            5678888888888888888888888888884 5554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=5.9e-07  Score=72.32  Aligned_cols=37  Identities=11%  Similarity=0.217  Sum_probs=27.8

Q ss_pred             ccCCcccccCc--CCccccChhHHHHHH-HHh-CCCceecC
Q 010444           76 KHGEKKWKCDK--CSKKYAVQSDWKAHQ-KTC-GTREYKCD  112 (510)
Q Consensus        76 H~geKp~~C~~--CgK~F~~ks~Lk~H~-rth-geKpykC~  112 (510)
                      ++++|||+|.+  |+|+|.++++|++|+ ++| ++|||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            46778888865  888888888888887 455 77888773

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.22  E-value=5.4e-07  Score=60.85  Aligned_cols=33  Identities=18%  Similarity=0.467  Sum_probs=29.0

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |+++|++++||+|++|++.|..+..|..|+++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            778888999999999999999999999998875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.16  E-value=1e-06  Score=58.39  Aligned_cols=33  Identities=21%  Similarity=0.540  Sum_probs=23.5

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHHHh-CCCc
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTRE  108 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geKp  108 (510)
                      |+++++|+|++|++.|..+..|+.|+++| +++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            56677777777777777777777777774 5543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.15  E-value=1.3e-06  Score=58.20  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=20.7

Q ss_pred             cccccCcCCccccChhHHHHHHHHh-CCCcee
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC-GTREYK  110 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth-geKpyk  110 (510)
                      |||+|++|++.|...+.|..|+++| +++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4666777777777777777777664 666664

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.15  E-value=1e-06  Score=58.63  Aligned_cols=26  Identities=35%  Similarity=0.651  Sum_probs=25.1

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            68999999999999999999999997

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.14  E-value=1.4e-06  Score=57.77  Aligned_cols=29  Identities=28%  Similarity=0.555  Sum_probs=27.4

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +++++|+|++|++.|.+...|++|+++|+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            47899999999999999999999999997

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.11  E-value=1.6e-06  Score=57.71  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=27.4

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|++|++.|.....|.+|+++|+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            47899999999999999999999999996

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.6e-06  Score=58.41  Aligned_cols=29  Identities=21%  Similarity=0.615  Sum_probs=27.4

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|++|++.|.+...|+.|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            37899999999999999999999999997

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.08  E-value=1.5e-06  Score=57.88  Aligned_cols=32  Identities=19%  Similarity=0.471  Sum_probs=20.9

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHHHh-CCC
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GTR  107 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~rth-geK  107 (510)
                      |+++++|+|++|++.|..+..|..|+++| +++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            55666677777777777777777776664 444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=2e-06  Score=58.12  Aligned_cols=33  Identities=24%  Similarity=0.376  Sum_probs=25.2

Q ss_pred             hhccCCcccccCcCCccccCh-hHHHHHHHHh-CC
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQ-SDWKAHQKTC-GT  106 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~k-s~Lk~H~rth-ge  106 (510)
                      ++|++++||+|++|++.|..+ +.|+.|+++| ++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            357778888888888888887 8888888774 44

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.7e-06  Score=60.94  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=27.2

Q ss_pred             CCCCcccccc--cCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++||||+|++  |+|.|.++..|++|+++|+
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            4799999986  9999999999999999997

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=2.1e-06  Score=53.86  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=25.5

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+||+|++|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            689999999999999999999999884

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.8e-06  Score=54.47  Aligned_cols=27  Identities=30%  Similarity=0.699  Sum_probs=25.4

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+||+|++|++.|.....|++|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            689999999999999999999999883

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.02  E-value=2.6e-06  Score=57.87  Aligned_cols=34  Identities=15%  Similarity=0.461  Sum_probs=23.2

Q ss_pred             ccCCcccccC--cCCccccChhHHHHHHHHh-CCCce
Q 010444           76 KHGEKKWKCD--KCSKKYAVQSDWKAHQKTC-GTREY  109 (510)
Q Consensus        76 H~geKp~~C~--~CgK~F~~ks~Lk~H~rth-geKpy  109 (510)
                      |+++++|+|+  .|++.|..++.|++|+++| +++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566777777  3777777777777777774 66665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=2.4e-06  Score=57.31  Aligned_cols=30  Identities=17%  Similarity=0.364  Sum_probs=20.2

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      .|.+++||+|++|++.|..++.|..|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            355666777777777777777777776664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=4.5e-06  Score=55.72  Aligned_cols=30  Identities=27%  Similarity=0.485  Sum_probs=22.5

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      .|.++++|+|++|++.|..+..|..|+++|
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLH   32 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHh
Confidence            456677777777777777777777777774

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=4.6e-06  Score=55.88  Aligned_cols=29  Identities=24%  Similarity=0.547  Sum_probs=27.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|++|++.|.....|++|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999999996

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=4e-06  Score=55.96  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=27.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|++|++.|.....|.+|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            5 SSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            36899999999999999999999999996

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=4.3e-06  Score=56.05  Aligned_cols=29  Identities=21%  Similarity=0.453  Sum_probs=27.2

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      .+++||+|++|++.|.....|.+|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            36899999999999999999999999996

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.96  E-value=4.8e-06  Score=56.04  Aligned_cols=29  Identities=34%  Similarity=0.772  Sum_probs=27.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|++|++.|.+...|.+|+++|.
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            7 TGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            47899999999999999999999999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=3e-06  Score=57.61  Aligned_cols=31  Identities=16%  Similarity=0.285  Sum_probs=24.2

Q ss_pred             hhccCCcccccCcCCccccChhHHHHH-HHHh
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAH-QKTC  104 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H-~rth  104 (510)
                      ++|+++|||+|++|++.|..+..|+.| +++|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            467778888888888888888888888 6665

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.95  E-value=3.8e-06  Score=52.88  Aligned_cols=27  Identities=26%  Similarity=0.673  Sum_probs=25.6

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+||+|++|++.|.....|+.|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            689999999999999999999999985

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=5.2e-06  Score=55.38  Aligned_cols=29  Identities=24%  Similarity=0.597  Sum_probs=27.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +++++|+|++|++.|.....|.+|+++|+
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            36899999999999999999999999996

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.95  E-value=2.6e-06  Score=59.49  Aligned_cols=26  Identities=23%  Similarity=0.437  Sum_probs=19.1

Q ss_pred             ccCCcccccCcCCccccChhHHHHHH
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQ  101 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~  101 (510)
                      +.+||||+|++|+|+|.++++|++|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            35677777777777777777777776

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=4.8e-06  Score=58.65  Aligned_cols=29  Identities=21%  Similarity=0.261  Sum_probs=19.0

Q ss_pred             ccCCcccccCc--CCccccChhHHHHHHHHh
Q 010444           76 KHGEKKWKCDK--CSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        76 H~geKp~~C~~--CgK~F~~ks~Lk~H~rth  104 (510)
                      ++++|||+|++  |+|.|.+++.|++|+++|
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            45666666664  666666666666666664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=5.9e-06  Score=55.35  Aligned_cols=29  Identities=21%  Similarity=0.508  Sum_probs=20.2

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |.++++|+|++|++.|.....|+.|+++|
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIH   32 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHh
Confidence            45667777777777777777777777764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=5.7e-06  Score=55.41  Aligned_cols=30  Identities=27%  Similarity=0.426  Sum_probs=22.7

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      .|.+++||+|++|++.|..+..|+.|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            466777777777777777777777777774

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=5.6e-06  Score=55.44  Aligned_cols=28  Identities=43%  Similarity=0.701  Sum_probs=26.8

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcC
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +++||+|++|++.|.....|++|+++|+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            6899999999999999999999999996

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=6.3e-06  Score=54.95  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=22.6

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +|.+++||+|++|++.|..+..|..|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            466777777777777777777777777775

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.90  E-value=4.1e-06  Score=56.82  Aligned_cols=29  Identities=24%  Similarity=0.680  Sum_probs=27.0

Q ss_pred             CCCCccccc--ccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~--~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|+  .|++.|.+...|++|+++|+
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            478999999  59999999999999999996

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.89  E-value=1e-05  Score=64.02  Aligned_cols=29  Identities=14%  Similarity=0.313  Sum_probs=18.3

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |.++|||+|.+|+|.|.++..|++|+++|
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~H   36 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQH   36 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhh
Confidence            44556666666666666666666666665

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.88  E-value=4.8e-06  Score=60.39  Aligned_cols=29  Identities=24%  Similarity=0.575  Sum_probs=19.9

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHH-Hh
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQK-TC  104 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~r-th  104 (510)
                      |+++|||+|.+|+|.|..+..|+.|++ +|
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H   31 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSH   31 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSS
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhc
Confidence            566677777777777777777777766 44

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.88  E-value=7.6e-06  Score=51.69  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=25.8

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++||+|++|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            689999999999999999999999996

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=6.2e-06  Score=55.58  Aligned_cols=29  Identities=24%  Similarity=0.485  Sum_probs=27.1

Q ss_pred             CCCCcccccccCcccCCh-HHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRD-QNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~-s~Lk~H~r~H~   29 (510)
                      ++++||+|++|++.|.+. ..|++|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            368999999999999999 99999999996

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.84  E-value=7.3e-06  Score=55.66  Aligned_cols=29  Identities=17%  Similarity=0.359  Sum_probs=27.0

Q ss_pred             CCCCcccccccCcccCChHHHHHH-HHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLH-RRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H-~r~H~   29 (510)
                      ++++||+|++|++.|..+..|+.| ++.|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            378999999999999999999999 89886

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.83  E-value=3.9e-06  Score=60.44  Aligned_cols=37  Identities=16%  Similarity=0.452  Sum_probs=30.0

Q ss_pred             HhHhhhccCCcccccC--cCCccccChhHHHHHHHHh-CC
Q 010444           70 KKHFSRKHGEKKWKCD--KCSKKYAVQSDWKAHQKTC-GT  106 (510)
Q Consensus        70 k~H~r~H~geKp~~C~--~CgK~F~~ks~Lk~H~rth-ge  106 (510)
                      ..|...|++++||+|+  .|+|.|..++.|+.|+++| ++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            4556678889999995  6999999999999998885 44

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.83  E-value=8.3e-06  Score=59.13  Aligned_cols=29  Identities=24%  Similarity=0.596  Sum_probs=27.4

Q ss_pred             CCCCcccccccCcccCChHHHHHHHH-hcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r-~H~   29 (510)
                      +++|||+|++|+|.|.....|++|++ +|.
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            47999999999999999999999999 886

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.81  E-value=1e-06  Score=58.17  Aligned_cols=26  Identities=31%  Similarity=0.556  Sum_probs=24.9

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++|++.|.+...|++|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHc
Confidence            68999999999999999999999997

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.79  E-value=9.6e-06  Score=56.56  Aligned_cols=26  Identities=27%  Similarity=0.645  Sum_probs=24.3

Q ss_pred             CCCCcccccccCcccCChHHHHHHHH
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRR   26 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r   26 (510)
                      ++||||+|++|+|.|.++++|++|+.
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcCC
Confidence            47999999999999999999999983

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.98  E-value=3.2e-06  Score=52.49  Aligned_cols=26  Identities=38%  Similarity=0.763  Sum_probs=24.3

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++|++.|.+...|+.|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999873

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.77  E-value=1.3e-05  Score=54.29  Aligned_cols=29  Identities=28%  Similarity=0.449  Sum_probs=20.6

Q ss_pred             ccCCcccccCc--CCccccChhHHHHHHHHh
Q 010444           76 KHGEKKWKCDK--CSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        76 H~geKp~~C~~--CgK~F~~ks~Lk~H~rth  104 (510)
                      |+++++|+|.+  |+|.|..++.|+.|+++|
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            56677777764  777777777777777764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.76  E-value=1.5e-05  Score=50.13  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=24.8

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999999996

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.76  E-value=1.2e-05  Score=50.69  Aligned_cols=26  Identities=38%  Similarity=0.701  Sum_probs=24.9

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            68999999999999999999999996

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.75  E-value=1.3e-05  Score=63.39  Aligned_cols=28  Identities=25%  Similarity=0.555  Sum_probs=27.1

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcC
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||||+|.+|+|.|.++..|++|+++|+
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            6899999999999999999999999997

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.72  E-value=1.7e-05  Score=49.96  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.8

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            68999999999999999999999996

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=2.1e-05  Score=51.00  Aligned_cols=27  Identities=30%  Similarity=0.800  Sum_probs=25.7

Q ss_pred             CCccccc--ccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~--~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+||+|+  .|++.|.+...|.+|+++|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            6899999  89999999999999999996

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.70  E-value=1.6e-05  Score=53.87  Aligned_cols=29  Identities=28%  Similarity=0.606  Sum_probs=26.8

Q ss_pred             CCCCcccccc--cCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++++||+|.+  |++.|.+...|++|+++|+
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            4789999995  9999999999999999996

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.86  E-value=5.6e-06  Score=52.58  Aligned_cols=27  Identities=33%  Similarity=0.593  Sum_probs=25.6

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++||+|++|++.|.....|+.|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            589999999999999999999999986

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.65  E-value=2.2e-05  Score=49.01  Aligned_cols=24  Identities=25%  Similarity=0.480  Sum_probs=14.1

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |||+|++|++.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            455666666666666666665554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=1.9e-05  Score=49.53  Aligned_cols=26  Identities=35%  Similarity=0.608  Sum_probs=24.8

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||+|++|++.|.....|..|+++|+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            68999999999999999999999986

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=1.9e-05  Score=49.40  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=24.8

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999999986

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.61  E-value=2.6e-05  Score=48.31  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=23.2

Q ss_pred             cccccccCcccCChHHHHHHHHhcC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||+|++|++.|.....|++|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            6999999999999999999999986

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.77  E-value=8.5e-06  Score=51.63  Aligned_cols=26  Identities=31%  Similarity=0.638  Sum_probs=24.7

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            68999999999999999999999986

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.60  E-value=3.6e-05  Score=49.58  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.7

Q ss_pred             Cccccc--ccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~--~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +||+|+  +|++.|.+...|+.|+++|+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            689998  99999999999999999996

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.59  E-value=4.4e-05  Score=47.85  Aligned_cols=24  Identities=25%  Similarity=0.663  Sum_probs=13.6

Q ss_pred             ccccCcCCccccChhHHHHHHHHh
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ||+|++|++.|.....|..|+++|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHHh
Confidence            455555555555555555555553

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.57  E-value=1.8e-05  Score=49.74  Aligned_cols=24  Identities=17%  Similarity=0.454  Sum_probs=13.7

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |||+|++|++.|..++.|+.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            455555555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.53  E-value=5.6e-05  Score=47.53  Aligned_cols=24  Identities=38%  Similarity=0.631  Sum_probs=15.1

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ++|+|++|++.|.....|..|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHH
Confidence            356666666666666666666666

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.48  E-value=3.6e-05  Score=48.22  Aligned_cols=24  Identities=17%  Similarity=0.728  Sum_probs=13.7

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      +||+|++|+|.|..+..|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh
Confidence            455555555555555555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.48  E-value=4.7e-05  Score=48.21  Aligned_cols=26  Identities=31%  Similarity=0.759  Sum_probs=24.2

Q ss_pred             CcccccccCcccCChHHHHHH-HHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLH-RRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H-~r~H~   29 (510)
                      +||+|++|++.|.....|..| +++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            689999999999999999999 68886

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.42  E-value=6.2e-05  Score=47.13  Aligned_cols=26  Identities=27%  Similarity=0.689  Sum_probs=24.6

Q ss_pred             Cccccc--ccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~--~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++|+|+  +|++.|.....|+.|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            689999  99999999999999999985

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.42  E-value=1.4e-05  Score=52.59  Aligned_cols=30  Identities=13%  Similarity=0.254  Sum_probs=18.0

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccc
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~   82 (510)
                      +|.|++|       ++.|.....|.+|+++|++++||
T Consensus         2 p~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPAC-------PKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSS-------CTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC-------CcccCCHHHHHHHHHHHccCCCC
Confidence            4566665       56666666666666666665554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=9.7e-05  Score=45.99  Aligned_cols=24  Identities=42%  Similarity=0.735  Sum_probs=13.6

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |||+|++|++.|.....|..|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            355555555555555555555555

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.49  E-value=2.6e-05  Score=48.22  Aligned_cols=24  Identities=25%  Similarity=0.720  Sum_probs=14.0

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |||+|++|++.|.....|+.|+++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            355666666666666666665554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=0.00015  Score=45.52  Aligned_cols=25  Identities=24%  Similarity=0.579  Sum_probs=14.7

Q ss_pred             cccccCcCCccccChhHHHHHHHHh
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +||.|.+|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHh
Confidence            4556666666666666666665553

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.39  E-value=3.6e-05  Score=48.66  Aligned_cols=24  Identities=21%  Similarity=0.563  Sum_probs=13.2

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      +||+|++|++.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            455555555555555555555555

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.23  E-value=0.00017  Score=45.15  Aligned_cols=25  Identities=20%  Similarity=0.470  Sum_probs=13.6

Q ss_pred             cccccCcCCccccChhHHHHHHHHh
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |||.|++|++.|.....|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHh
Confidence            3455555555555555555555553

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=0.00022  Score=44.44  Aligned_cols=25  Identities=24%  Similarity=0.606  Sum_probs=15.7

Q ss_pred             cccccCcCCccccChhHHHHHHHHh
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +||+|++|++.|.....|..|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHh
Confidence            3566666666666666666666663

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.13  E-value=0.00066  Score=53.01  Aligned_cols=44  Identities=16%  Similarity=0.292  Sum_probs=23.4

Q ss_pred             CCccccChhHHHHHHHH-h-CC------CceecC---CCCcccChhHHHHHHHHh
Q 010444           87 CSKKYAVQSDWKAHQKT-C-GT------REYKCD---CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus        87 CgK~F~~ks~Lk~H~rt-h-ge------KpykC~---Cgk~F~~kssL~~H~r~h  130 (510)
                      |++.|.....|..|+.. | +.      ++|.|.   |++.+.....|+.|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45555555555555432 3 22      256664   666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.11  E-value=0.0003  Score=45.36  Aligned_cols=25  Identities=28%  Similarity=0.695  Sum_probs=15.7

Q ss_pred             cccccC--cCCccccChhHHHHHHHHh
Q 010444           80 KKWKCD--KCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~--~CgK~F~~ks~Lk~H~rth  104 (510)
                      |||+|+  .|++.|.....|..|+++|
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            566666  5666666666666666664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.09  E-value=0.00032  Score=44.94  Aligned_cols=23  Identities=22%  Similarity=0.707  Sum_probs=11.9

Q ss_pred             ccccC--cCCccccChhHHHHHHHH
Q 010444           81 KWKCD--KCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        81 p~~C~--~CgK~F~~ks~Lk~H~rt  103 (510)
                      ||+|+  .|++.|.....|+.|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH
Confidence            45554  455555555555555554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.03  E-value=0.00079  Score=52.54  Aligned_cols=52  Identities=13%  Similarity=0.309  Sum_probs=45.1

Q ss_pred             eeCCCCCCCCCCCCCccCChhHHHhHhh-hccCCc------ccccC--cCCccccChhHHHHHHHH
Q 010444           47 YICPEPSCVHHNPARALGDLTGIKKHFS-RKHGEK------KWKCD--KCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H~geK------p~~C~--~CgK~F~~ks~Lk~H~rt  103 (510)
                      |.|.+.+|     ++.|.+...|..|+. .|.+.+      +|.|.  -|++.+.....|..|+++
T Consensus         2 l~C~W~~C-----~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKEC-----PESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTC-----CCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCC-----CCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            56777767     999999999999984 787665      79997  599999999999999997

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.99  E-value=0.00013  Score=45.95  Aligned_cols=25  Identities=28%  Similarity=0.497  Sum_probs=16.1

Q ss_pred             cccccCcCCccccChhHHHHHHHHh
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |||+|++|++.|.....|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            3566666666666666666666664

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.86  E-value=0.00051  Score=49.05  Aligned_cols=33  Identities=12%  Similarity=0.336  Sum_probs=29.4

Q ss_pred             ccccceeeCC--CCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444           41 EVRKRVYICP--EPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus        41 ~~~ekpy~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      +.++++|.|+  .|       ++.|.....|++|+++|+++|
T Consensus        13 H~~~k~~~C~~~~C-------~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           13 EMPDKTFECLFPGC-------TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTC-------CCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCCeECCCCCC-------CCccCCHHHHHHHHHHccCCC
Confidence            4589999996  57       999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.83  E-value=0.00059  Score=42.91  Aligned_cols=20  Identities=15%  Similarity=0.531  Sum_probs=11.4

Q ss_pred             ccccCcCCccccChhHHHHH
Q 010444           81 KWKCDKCSKKYAVQSDWKAH  100 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H  100 (510)
                      ||+|+.|++.|.....|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            45555555555555555555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.80  E-value=0.00042  Score=43.18  Aligned_cols=25  Identities=16%  Similarity=0.517  Sum_probs=18.9

Q ss_pred             cccccC--cCCccccChhHHHHHHHHh
Q 010444           80 KKWKCD--KCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~--~CgK~F~~ks~Lk~H~rth  104 (510)
                      ++|+|+  .|++.|..++.|..|+++|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            467777  7888888888887777765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.80  E-value=0.00077  Score=41.37  Aligned_cols=24  Identities=25%  Similarity=0.642  Sum_probs=13.2

Q ss_pred             ccccCcCCccccChhHHHHHHHHh
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ||+|++|+|.|..+..|..|+++|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHc
Confidence            355555555555555555555553

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.69  E-value=0.00045  Score=61.20  Aligned_cols=83  Identities=14%  Similarity=0.241  Sum_probs=46.2

Q ss_pred             CcccccccCcccCChHHHHHHH--HhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcc
Q 010444            4 NRFVCEICNKGFQRDQNLQLHR--RGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~--r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp   81 (510)
                      +++.|.+|...|.....+..|.  +.|..            ..+.|.+. +.+....+.+.+....    +...+...+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~------------~v~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~   93 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHAN------------KVRRYMAI-NQGEDSVPAKKFKAAP----AEISDGEDRS   93 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHH------------HHHHHHHH-TTCCCCCSCCCCSCCS----SCCSSCCCTT
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHH------------HHHHHhcc-cCcccCCCCCccCCCc----cccccCCCCC
Confidence            5678999999999888888888  55531            11122221 1000001123332211    2233445666


Q ss_pred             cccCcCCccccChhHHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |.|.+|.+.|.....|..|++.
T Consensus        94 ~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           94 KCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TEETTTTEECSSHHHHHHHHTS
T ss_pred             eEcCCCCCEeCCHHHHHHHHCC
Confidence            7777777777777777777654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.60  E-value=0.0064  Score=55.65  Aligned_cols=80  Identities=19%  Similarity=0.463  Sum_probs=51.3

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-hCCCceecC-CCCcccChhH
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREYKCD-CGTIFSRRDS  122 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpykC~-Cgk~F~~kss  122 (510)
                      ....|+.-+|     ...+ ....+..|.. .-..++..|+.|+..+ .+..|..|... +..++..|. |+..|..+ .
T Consensus        81 l~v~C~n~GC-----~~~~-~~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~-~  151 (170)
T 3hcs_A           81 LMVKCPNEGC-----LHKM-ELRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE-D  151 (170)
T ss_dssp             SEEECCSTTC-----CCEE-EGGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG-G
T ss_pred             cccCCCCCCC-----Ccee-cHhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH-H
Confidence            4456654344     4433 3455667763 3334667788888877 55678888865 677888888 88877654 5


Q ss_pred             HHHHHHHhccc
Q 010444          123 FITHRAFCDAL  133 (510)
Q Consensus       123 L~~H~r~hh~~  133 (510)
                      |..|...+.+.
T Consensus       152 l~~H~~~~~~~  162 (170)
T 3hcs_A          152 KEIHDQNCPLA  162 (170)
T ss_dssp             HHHHHTTCCC-
T ss_pred             HHhHHHhCcCh
Confidence            67887766543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.85  E-value=0.0063  Score=53.90  Aligned_cols=28  Identities=25%  Similarity=0.390  Sum_probs=25.7

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhc
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      +|+++|.|.+|+|.|.+...|..|+++.
T Consensus        46 tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           46 PGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4789999999999999999999999865

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.72  E-value=0.0067  Score=53.71  Aligned_cols=29  Identities=17%  Similarity=0.430  Sum_probs=19.0

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHH
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      .|+++++|.|..|+|.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            45666666676666666666666666554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.49  E-value=0.028  Score=49.54  Aligned_cols=74  Identities=15%  Similarity=0.196  Sum_probs=50.4

Q ss_pred             cceeeCCCCCCCCCCCCCccCChhHHHhHh--hhccCC-cccccCcC------CccccChhHHHHHHHH-hCCCceecC-
Q 010444           44 KRVYICPEPSCVHHNPARALGDLTGIKKHF--SRKHGE-KKWKCDKC------SKKYAVQSDWKAHQKT-CGTREYKCD-  112 (510)
Q Consensus        44 ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~--r~H~ge-Kp~~C~~C------gK~F~~ks~Lk~H~rt-hgeKpykC~-  112 (510)
                      .+++.|.+|       ...|.+...+..|+  +.|... +.|.+..+      ++++....    +... ...+.|.|+ 
T Consensus        30 ~~~~~C~~C-------~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~   98 (127)
T 1zu1_A           30 FSDTQCKVC-------SAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV   98 (127)
T ss_dssp             BCSSEETTT-------TEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT
T ss_pred             CCCCcCcCC-------CCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC
Confidence            467899998       88999999999998  566532 44554211      22332211    1111 246779999 


Q ss_pred             CCCcccChhHHHHHHH
Q 010444          113 CGTIFSRRDSFITHRA  128 (510)
Q Consensus       113 Cgk~F~~kssL~~H~r  128 (510)
                      |.+.|.....|..|..
T Consensus        99 C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           99 CNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEECSSHHHHHHHHT
T ss_pred             CCCEeCCHHHHHHHHC
Confidence            9999999999999984

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.46  E-value=0.022  Score=42.02  Aligned_cols=25  Identities=20%  Similarity=0.574  Sum_probs=13.8

Q ss_pred             ceecC-CCCcccChhHHHHHHHHhcc
Q 010444          108 EYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus       108 pykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      +|.|+ |++.|+..+.|+.|++.|+.
T Consensus        12 ~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             ceeCCcccccccchHHHHhhhhhcCc
Confidence            45555 55555555555555555543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.22  E-value=0.059  Score=39.72  Aligned_cols=24  Identities=17%  Similarity=0.468  Sum_probs=20.1

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      -+|.|+.|++.|...+.|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            467888888888888888888886

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=88.96  E-value=0.37  Score=43.72  Aligned_cols=57  Identities=21%  Similarity=0.342  Sum_probs=42.5

Q ss_pred             cceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH-hCCCce
Q 010444           44 KRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGTREY  109 (510)
Q Consensus        44 ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKpy  109 (510)
                      -++..|+.|       +..+ .+..|..|....-..++..|++|+..+.. ..|+.|..+ .|+.++
T Consensus       108 ~~~v~C~~C-------~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          108 FALMDCPQC-------QRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TSEEECTTT-------CCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             ceeeECCCC-------ChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            356789876       6666 57789999988888889999999988865 578999988 466554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	510
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 2e-04
 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 3/51 (5%)

Query: 79  EKKWKCDKCSKKYAVQSDWKAHQKTCGT-REYKCD-CGTIFSRRDSFITHR 127
           +K + C  C K +  +S    H       R Y C  CG  F  +   + H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 79  EKKWKCDKCSKKYAVQSDWKAHQKTCGTRE--YKCD 112
            K + C  C K ++       H K   T E  +KC 
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKTCGTRE 108
           R H GEK ++C  C  ++      K H     T  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 75  RKH-GEKKWKCDKCSKKYAVQSDWKAHQKT 103
           R H GEK + C  C K +  +     H K 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKR 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	510
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.34
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.33
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.88
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.81
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.79
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.76
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.74
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.72
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.66
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.65
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.59
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.59
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.57
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.52
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.5
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.47
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.46
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.44
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.42
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.4
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.38
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.32
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.31
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.19
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.18
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.18
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.13
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.12
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.07
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.04
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.04
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.01
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.95
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.95
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.91
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.89
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.78
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.73
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.55
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.54
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.2
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.18
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.95
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.86
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.74
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.73
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.72
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.71
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.62
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.6
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.5
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.49
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.37
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.36
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.33
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.19
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.14
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.84
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.77
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.67
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.62
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.6
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.57
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.55
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.51
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.48
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.48
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.35
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.34
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.3
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.93
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.51
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.34
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.24
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.01
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	93.97
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.79
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.75
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	93.7
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	93.11
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.87
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.82
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.72
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.6
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.59
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.02
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.16
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.96
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	90.83
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	88.7
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	88.15
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.79
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.21
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	84.94
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.83
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	80.25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.9e-13  Score=101.03  Aligned_cols=53  Identities=19%  Similarity=0.319  Sum_probs=27.9

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhc
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      ||||+|+ |++.|..+..|+.|+++|+             +++||.|++|       ++.|.....|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-------------~ekpy~C~~C-------~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-------------GLRPYGCGVC-------GKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-------------CCCSEECTTT-------SCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-------------cccCCcCCCc-------CCEecCHHHHHHHHhcC
Confidence            4555553 5555555555555555554             4555555555       45555555555555443

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.7e-13  Score=101.17  Aligned_cols=44  Identities=20%  Similarity=0.474  Sum_probs=23.9

Q ss_pred             CCccCChhHHHhHhhhccCCcccccCcCCccccChhHHHHHHHH
Q 010444           60 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        60 ~k~F~~~s~Lk~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ++.|.....|..|+++|+++|||+|.+|++.|...+.|..|+++
T Consensus         9 gk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           9 GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            55555555555555555555555555555555555555555544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.5e-10  Score=78.63  Aligned_cols=37  Identities=30%  Similarity=0.652  Sum_probs=34.0

Q ss_pred             CCCcccccccCcccCChHHHHHHHH-hcCCCcccccccccccccceeeCCC
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r-~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      .+|||+|++|+|.|.+..+|++|++ +|+             ++|||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht-------------~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC-------------CCcCcCCcC
Confidence            5899999999999999999999986 687             999999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=9.7e-10  Score=76.89  Aligned_cols=34  Identities=26%  Similarity=0.586  Sum_probs=18.8

Q ss_pred             CcccccCcCCccccChhHHHHHHHH-h-CCCceecC
Q 010444           79 EKKWKCDKCSKKYAVQSDWKAHQKT-C-GTREYKCD  112 (510)
Q Consensus        79 eKp~~C~~CgK~F~~ks~Lk~H~rt-h-geKpykC~  112 (510)
                      +|||+|++|+|.|..+++|++|++. | ++|||+|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4555555555555555555555542 3 55555553

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=6.8e-10  Score=77.27  Aligned_cols=36  Identities=28%  Similarity=0.667  Sum_probs=32.1

Q ss_pred             hHhhhccCCcccccCcCCccccChhHHHHHHHHh-CC
Q 010444           71 KHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC-GT  106 (510)
Q Consensus        71 ~H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth-ge  106 (510)
                      +|+++|+++|||+|++|+|+|...++|..|+++| ||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5888999999999999999999999999999985 54

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=1.2e-09  Score=75.65  Aligned_cols=33  Identities=18%  Similarity=0.467  Sum_probs=30.0

Q ss_pred             HhhhccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           72 HFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        72 H~r~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |.|+|++||||+|++|+|+|.++++|++|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            678999999999999999999999999998886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.3e-09  Score=73.64  Aligned_cols=34  Identities=24%  Similarity=0.469  Sum_probs=29.4

Q ss_pred             hhccCCcccccCcCCccccChhHHHHHHHHhCCC
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTR  107 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H~rthgeK  107 (510)
                      |+|++||||+|++|+|+|..++.|+.|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5789999999999999999999999999986443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=2.5e-09  Score=73.02  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=28.1

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +|||||+|++|+|.|.++.+|++|+|+|+
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccC
Confidence            68999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=5.1e-09  Score=70.54  Aligned_cols=30  Identities=30%  Similarity=0.541  Sum_probs=24.6

Q ss_pred             hccCCcccccCcCCccccChhHHHHHHHHh
Q 010444           75 RKHGEKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        75 ~H~geKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      +|++||||+|.+|+|+|.+++.|+.|+|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            477888888888888888888888888885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.2e-09  Score=70.10  Aligned_cols=29  Identities=31%  Similarity=0.567  Sum_probs=28.1

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++||||+|++|+|.|.+++.|++|+|+|+
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            58999999999999999999999999997

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=4.8e-09  Score=68.10  Aligned_cols=27  Identities=37%  Similarity=0.797  Sum_probs=26.2

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||||+|++|+|.|.++.+|++|+|+|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            799999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=9.2e-09  Score=70.60  Aligned_cols=33  Identities=21%  Similarity=0.446  Sum_probs=27.2

Q ss_pred             hhccCCcccccCcCCccccChhHHHHHHHH-hCC
Q 010444           74 SRKHGEKKWKCDKCSKKYAVQSDWKAHQKT-CGT  106 (510)
Q Consensus        74 r~H~geKp~~C~~CgK~F~~ks~Lk~H~rt-hge  106 (510)
                      |+|++||||+|++|+|.|.++++|+.|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            578889999999999999999999988776 543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=9e-09  Score=70.18  Aligned_cols=30  Identities=17%  Similarity=0.485  Sum_probs=22.1

Q ss_pred             ccCCcccccCcCCccccChhHHHHHHHHhC
Q 010444           76 KHGEKKWKCDKCSKKYAVQSDWKAHQKTCG  105 (510)
Q Consensus        76 H~geKp~~C~~CgK~F~~ks~Lk~H~rthg  105 (510)
                      |++||||+|++|+|.|.++++|++|+|+|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            567777777777777777777777777763

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.5e-08  Score=69.53  Aligned_cols=29  Identities=24%  Similarity=0.594  Sum_probs=28.1

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +|||||+|++|+|.|.++..|+.|+++|+
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            68999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=2.3e-08  Score=68.99  Aligned_cols=29  Identities=34%  Similarity=0.772  Sum_probs=27.7

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +|||||+|++|+|.|.++.+|++|+++|.
T Consensus         7 TgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           7 TGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            58999999999999999999999999984

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.50  E-value=3e-08  Score=64.82  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=25.4

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++|+|.|.+...|++|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            79999999999999999999999997

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.1e-08  Score=63.77  Aligned_cols=26  Identities=31%  Similarity=0.637  Sum_probs=24.9

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++|||.|.+.+.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999984

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=3.8e-08  Score=67.47  Aligned_cols=35  Identities=23%  Similarity=0.707  Sum_probs=28.0

Q ss_pred             eeCCCCCCCCCCCCCccCChhHHHhHhhhccCCcccccCc
Q 010444           47 YICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDK   86 (510)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~~C~~   86 (510)
                      |.|++.+|     +++|..+..|++|+++|++||||+|++
T Consensus         2 f~C~~~~C-----~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPAC-----GKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTT-----CCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCC-----CCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67877666     888888888888888888888888863

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.44  E-value=1.4e-08  Score=73.74  Aligned_cols=39  Identities=23%  Similarity=0.453  Sum_probs=31.3

Q ss_pred             HHHhHhhhccCCcccccCc--CCccccChhHHHHHHHHh-CCC
Q 010444           68 GIKKHFSRKHGEKKWKCDK--CSKKYAVQSDWKAHQKTC-GTR  107 (510)
Q Consensus        68 ~Lk~H~r~H~geKp~~C~~--CgK~F~~ks~Lk~H~rth-geK  107 (510)
                      .|.+|++ |++||||+|.+  |+|+|.++++|+.|+++| ++|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4556664 88899999987  999999999999998885 654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=5.1e-08  Score=63.64  Aligned_cols=26  Identities=35%  Similarity=0.756  Sum_probs=25.3

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||.|++|+|.|.++++|.+|+|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            79999999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=5.3e-08  Score=66.72  Aligned_cols=29  Identities=17%  Similarity=0.507  Sum_probs=26.4

Q ss_pred             CCCCcccccccCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +|||||+|++|++.|.++.+|++|++.++
T Consensus         4 TgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           4 SGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCEeCCCCcccccchHHHHHHccccc
Confidence            68999999999999999999999986554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=8e-08  Score=62.70  Aligned_cols=27  Identities=30%  Similarity=0.629  Sum_probs=16.5

Q ss_pred             cccccCcCCccccChhHHHHHHHHh-CC
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC-GT  106 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth-ge  106 (510)
                      |||.|++|+|.|.++++|.+|+|+| +|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4566666666666666666666664 44

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=9.8e-08  Score=61.76  Aligned_cols=26  Identities=19%  Similarity=0.583  Sum_probs=15.7

Q ss_pred             CcccccCcCCccccChhHHHHHHHHh
Q 010444           79 EKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        79 eKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ||||+|++|+|+|.++++|++|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            45666666666666666666666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=5.1e-08  Score=67.54  Aligned_cols=32  Identities=25%  Similarity=0.502  Sum_probs=30.0

Q ss_pred             ccccceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           41 EVRKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        41 ~~~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      +.++|||+|++|       +|.|...+.|.+|+++|++|
T Consensus         7 Ht~ekpy~C~~C-------gK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           7 QRERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCS
T ss_pred             cCCCCCEecCCC-------CceeeCHHHHHHhCccCCCC
Confidence            349999999999       99999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=9.7e-08  Score=65.36  Aligned_cols=33  Identities=36%  Similarity=0.709  Sum_probs=30.8

Q ss_pred             ccccc--cCcccCChHHHHHHHHhcCCCcccccccccccccceeeCCC
Q 010444            6 FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVRKRVYICPE   51 (510)
Q Consensus         6 y~C~~--CgK~F~~~s~Lk~H~r~H~~p~k~~~~~~~~~~ekpy~C~~   51 (510)
                      |+|++  |+|.|.++..|++|+++|+             ++|||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht-------------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS-------------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH-------------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC-------------CCCCEeCCC
Confidence            88987  9999999999999999997             999999974

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4.1e-07  Score=59.68  Aligned_cols=26  Identities=35%  Similarity=0.731  Sum_probs=25.2

Q ss_pred             Ccccccc--cCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++  |+|.|.+.++|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            7999999  9999999999999999997

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.18  E-value=4.1e-07  Score=59.24  Aligned_cols=27  Identities=22%  Similarity=0.626  Sum_probs=16.2

Q ss_pred             cccccCcCCccccChhHHHHHHHHh-CC
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC-GT  106 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth-ge  106 (510)
                      |||+|++|+|+|.++++|++|+++| ||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4566666666666666666666664 44

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.4e-07  Score=58.07  Aligned_cols=24  Identities=33%  Similarity=0.677  Sum_probs=12.6

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |||+|++|+|.|..++.|..|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            355555555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.13  E-value=5.5e-07  Score=59.93  Aligned_cols=27  Identities=30%  Similarity=0.828  Sum_probs=26.1

Q ss_pred             CCcccccc--cCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||||.|++  |+|.|.+..+|++|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            79999998  9999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.3e-07  Score=59.60  Aligned_cols=26  Identities=42%  Similarity=0.740  Sum_probs=24.9

Q ss_pred             Ccccccc--cCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            7999988  9999999999999999997

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1e-06  Score=58.23  Aligned_cols=31  Identities=23%  Similarity=0.550  Sum_probs=22.3

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      |||.|++.+|     +++|.....|++|+++|++||
T Consensus         1 kpf~C~~~~C-----~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYC-----GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-----CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCC-----CcCcCChhHhhhhcCcccccC
Confidence            4677776555     777777777777777777765

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.2e-06  Score=57.87  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.5

Q ss_pred             Cccccc--ccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~--~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|+  .|+|.|.+..+|++|+|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            799996  59999999999999999997

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.04  E-value=4.5e-07  Score=65.56  Aligned_cols=29  Identities=34%  Similarity=0.670  Sum_probs=27.5

Q ss_pred             CCCCcccccc--cCcccCChHHHHHHHHhcC
Q 010444            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++||||+|++  |+|.|.+.++|++|+++|+
T Consensus        14 ~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_          14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             cCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            4799999988  9999999999999999997

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.01  E-value=1.3e-06  Score=58.00  Aligned_cols=25  Identities=28%  Similarity=0.717  Sum_probs=12.1

Q ss_pred             cccccCc--CCccccChhHHHHHHHHh
Q 010444           80 KKWKCDK--CSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~--CgK~F~~ks~Lk~H~rth  104 (510)
                      |||.|++  |+|+|.+.++|++|+++|
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            4444444  444444444444444444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=7.9e-07  Score=57.34  Aligned_cols=26  Identities=38%  Similarity=0.760  Sum_probs=24.7

Q ss_pred             Ccccccc--cCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999998  9999999999999999984

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.8e-06  Score=56.53  Aligned_cols=30  Identities=13%  Similarity=0.413  Sum_probs=16.5

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      |||+|++.+|     +|+|.....|++|+++|++|
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGC-----GKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTC-----CCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCC-----CceECcHHHcCccccccCCC
Confidence            3555555444     55555555555555555543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.1e-06  Score=56.19  Aligned_cols=28  Identities=21%  Similarity=0.491  Sum_probs=13.9

Q ss_pred             eeeCCCCCCCCCCCCCccCChhHHHhHhhhccC
Q 010444           46 VYICPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (510)
Q Consensus        46 py~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g   78 (510)
                      ||+|++.+|     +|+|...+.|++|+++|++
T Consensus         2 p~~C~~~gC-----gk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGC-----RKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTC-----CCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCC-----CceECChhHhhhhcCcCcC
Confidence            455555333     4555555555555555544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=2.5e-06  Score=53.72  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=25.7

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||||.|++|++.|.+....++|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            799999999999999999999999984

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=1.5e-06  Score=56.48  Aligned_cols=26  Identities=31%  Similarity=0.777  Sum_probs=24.8

Q ss_pred             Ccccccc--cCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~--CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            7999988  9999999999999999995

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=4.3e-06  Score=52.66  Aligned_cols=26  Identities=38%  Similarity=0.750  Sum_probs=16.3

Q ss_pred             CcccccCcCCccccChhHHHHHHHHh
Q 010444           79 EKKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        79 eKp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      ||||.|++|+++|++....++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            45666666666666666666666554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=6.3e-06  Score=53.48  Aligned_cols=29  Identities=31%  Similarity=0.709  Sum_probs=18.5

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g   78 (510)
                      |||+|++.+|     +|+|...+.|++|+++|+|
T Consensus         1 Kp~~C~~~gC-----~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESC-----DRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCC-----CcEECchhHhhhhcCccCC
Confidence            4666666555     6666666666666666653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=7.1e-06  Score=50.17  Aligned_cols=25  Identities=40%  Similarity=0.805  Sum_probs=23.8

Q ss_pred             cccccccCcccCChHHHHHHHHhcC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |++|+.|+|.|.++..|+.|+|.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            6899999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=1.1e-05  Score=51.78  Aligned_cols=25  Identities=32%  Similarity=0.634  Sum_probs=12.7

Q ss_pred             cccccCc--CCccccChhHHHHHHHHh
Q 010444           80 KKWKCDK--CSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~--CgK~F~~ks~Lk~H~rth  104 (510)
                      |||+|++  |+|+|.+.++|++|+|+|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3455544  555555555555555543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.7e-05  Score=50.69  Aligned_cols=27  Identities=26%  Similarity=0.765  Sum_probs=26.0

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||||.|++|...|+++..+.-|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            799999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=2.4e-05  Score=47.79  Aligned_cols=24  Identities=25%  Similarity=0.588  Sum_probs=13.8

Q ss_pred             ccccCcCCccccChhHHHHHHHHh
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |++|++|+|.|.++..|+.|+|.|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGC
T ss_pred             CCccchhhhHhcchhHHHHHhhcc
Confidence            345666666666666666665543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=9.3e-05  Score=47.06  Aligned_cols=25  Identities=20%  Similarity=0.507  Sum_probs=18.5

Q ss_pred             CceecC---CCCcccChhHHHHHHHHhc
Q 010444          107 REYKCD---CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus       107 KpykC~---Cgk~F~~kssL~~H~r~hh  131 (510)
                      |||.|.   |.|+|...++|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            577776   7777777777777777665

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=8.2e-05  Score=47.47  Aligned_cols=26  Identities=35%  Similarity=0.719  Sum_probs=14.1

Q ss_pred             CCceecC-CCCcccChhHHHHHHHHhc
Q 010444          106 TREYKCD-CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus       106 eKpykC~-Cgk~F~~kssL~~H~r~hh  131 (510)
                      ||||.|+ |..+|++++.+.-|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            3555555 5555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00017  Score=46.99  Aligned_cols=26  Identities=35%  Similarity=0.683  Sum_probs=23.9

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |...|++|+|.|+....|.+|...|.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs   29 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHS   29 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccC
Confidence            45679999999999999999999997

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00028  Score=44.01  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=25.9

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ||||+|..|...-+..+.|..|+|.|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            799999999999999999999999996

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00042  Score=42.87  Aligned_cols=26  Identities=23%  Similarity=0.511  Sum_probs=24.9

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            89999999999999999999999995

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00039  Score=47.60  Aligned_cols=28  Identities=39%  Similarity=0.877  Sum_probs=24.0

Q ss_pred             CCCceecC-CCCcccChhHHHHHHHHhcc
Q 010444          105 GTREYKCD-CGTIFSRRDSFITHRAFCDA  132 (510)
Q Consensus       105 geKpykC~-Cgk~F~~kssL~~H~r~hh~  132 (510)
                      |.|||.|. |+|+|..++++.+|+..|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~C~k   30 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTSCTK   30 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhhhhh
Confidence            67899999 99999999999999877753

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00047  Score=43.76  Aligned_cols=28  Identities=29%  Similarity=0.765  Sum_probs=17.4

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      |||.|.+++|     .|+|.+.+.|++|++.++
T Consensus         1 KPY~Ck~~gC-----~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGC-----TKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTT-----CCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCC-----CcccCCHHHHHHHHHhhC
Confidence            4566666655     666666666666666544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00039  Score=45.21  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=24.6

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCCccc
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geKp~   82 (510)
                      +...|+.|       +|.|.+...|.+|...|.+||||
T Consensus         4 k~~~ce~c-------gk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTT-------TEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHH-------HHHHHHHHHHHhhhcccCCCCCC
Confidence            44568887       78888888888888888888887

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.0007  Score=42.59  Aligned_cols=25  Identities=36%  Similarity=0.589  Sum_probs=19.5

Q ss_pred             cccccCcCCccccChhHHHHHHHH-h
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT-C  104 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt-h  104 (510)
                      |||.|.+|..+-+..++|+.|+++ |
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            577888888887888888888777 5

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00053  Score=42.50  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=23.9

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |-+.|.+|+|.|...+.|++|..+|+
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhccc
Confidence            35789999999999999999999997

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00084  Score=41.96  Aligned_cols=27  Identities=26%  Similarity=0.392  Sum_probs=21.2

Q ss_pred             eeCCCCCCCCCCCCCccCChhHHHhHhhhccCCc
Q 010444           47 YICPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      |.|+.|       +.+....+.|++|+|.|++++
T Consensus         2 YvC~~C-------g~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEEC-------GIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTT-------CCBCSSHHHHHHHHHHTSSCC
T ss_pred             cccccc-------CcccCCHHHHHHHHHHhcCCC
Confidence            678887       778888888888888888764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00079  Score=41.92  Aligned_cols=28  Identities=18%  Similarity=0.319  Sum_probs=18.0

Q ss_pred             cceeeCCCCCCCCCCCCCccCChhHHHhHhhhccC
Q 010444           44 KRVYICPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (510)
Q Consensus        44 ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~g   78 (510)
                      ++||+|..|       .++-++.+.|..|.|+|++
T Consensus         1 erpfkcqlc-------sy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQIC-------PYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSS-------SCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeec-------ccccCCchheEEeeecccC
Confidence            356666666       5666666666666666665

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0011  Score=41.04  Aligned_cols=24  Identities=25%  Similarity=0.519  Sum_probs=15.1

Q ss_pred             CceecC-CCCcccChhHHHHHHHHh
Q 010444          107 REYKCD-CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus       107 KpykC~-Cgk~F~~kssL~~H~r~h  130 (510)
                      |||+|. |.+.-...++|.+|+|.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            566666 666666666666666655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.36  E-value=0.00087  Score=40.41  Aligned_cols=24  Identities=29%  Similarity=0.783  Sum_probs=22.7

Q ss_pred             ccccccCcccCChHHHHHHHHhcC
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |+|..|.+.|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            899999999999999999999983

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.00098  Score=45.60  Aligned_cols=26  Identities=23%  Similarity=0.551  Sum_probs=24.1

Q ss_pred             CCCCcccccccCcccCChHHHHHHHH
Q 010444            1 MATNRFVCEICNKGFQRDQNLQLHRR   26 (510)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~Lk~H~r   26 (510)
                      +|-|||.|.+|+|.|..+..+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999974

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0018  Score=40.38  Aligned_cols=25  Identities=28%  Similarity=0.646  Sum_probs=23.9

Q ss_pred             cccccccCcccCChHHHHHHHHhcC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +|.|++|+......+-|+.|+|.|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CccccccCcccCCHHHHHHHHHHhc
Confidence            5999999999999999999999997

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.14  E-value=0.0016  Score=40.67  Aligned_cols=24  Identities=25%  Similarity=0.519  Sum_probs=17.2

Q ss_pred             CceecC---CCCcccChhHHHHHHHHh
Q 010444          107 REYKCD---CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus       107 KpykC~---Cgk~F~~kssL~~H~r~h  130 (510)
                      .||+|.   |+++|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467775   777777777777777665

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.84  E-value=0.0027  Score=38.76  Aligned_cols=21  Identities=24%  Similarity=0.240  Sum_probs=13.1

Q ss_pred             CCccCChhHHHhHhhhccCCc
Q 010444           60 ARALGDLTGIKKHFSRKHGEK   80 (510)
Q Consensus        60 ~k~F~~~s~Lk~H~r~H~geK   80 (510)
                      .+.|.++..|+.|.|.|++||
T Consensus         7 ~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           7 HKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCCCSSHHHHHHHHHHHSSCC
T ss_pred             HHHHHHhHhhhhccccccCCC
Confidence            566666666666666666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0028  Score=38.70  Aligned_cols=23  Identities=35%  Similarity=0.719  Sum_probs=22.2

Q ss_pred             cccccCcccCChHHHHHHHHhcC
Q 010444            7 VCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         7 ~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      +|+.|.|.|..+..|+.|-|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            79999999999999999999997

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.67  E-value=0.0033  Score=39.16  Aligned_cols=27  Identities=22%  Similarity=0.493  Sum_probs=17.2

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhc
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRK   76 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (510)
                      .||+|+.-+|     ++.|...+.|++|.++|
T Consensus         2 ~py~c~hegc-----dk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGC-----DKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCc-----cccccCHHHHhhhhhcc
Confidence            3566666555     66666666666666655

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0033  Score=41.29  Aligned_cols=33  Identities=21%  Similarity=0.454  Sum_probs=27.7

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      |.|.|.+-+|.+.  ++.|..+..|..|+|+|++|
T Consensus         1 k~y~C~W~~C~R~--~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRE--LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTT--TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCC--CCcchhHHHHHHHHhhcCCC
Confidence            3588998888665  67899999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0043  Score=38.34  Aligned_cols=26  Identities=27%  Similarity=0.475  Sum_probs=17.9

Q ss_pred             eeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           47 YICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      +.|.+|       +|+|...+.|++|..+|++|
T Consensus         3 hvc~ec-------gkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAEC-------GKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTT-------CCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHH-------hHHHHHHHHHHHHhhcccCC
Confidence            456666       67777777777777777654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.0031  Score=39.38  Aligned_cols=23  Identities=17%  Similarity=0.583  Sum_probs=14.5

Q ss_pred             ccccCcCCccccChhHHHHHHHH
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ||.|..|...|+.+.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45666666666666666666654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.55  E-value=0.004  Score=38.84  Aligned_cols=27  Identities=33%  Similarity=0.792  Sum_probs=25.3

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |.-|.|..|...|+++-.|+.|+..|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            567999999999999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.51  E-value=0.0028  Score=38.15  Aligned_cols=23  Identities=26%  Similarity=0.680  Sum_probs=14.5

Q ss_pred             cccCcCCccccChhHHHHHHHHh
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |+|..|.+.|..++.|.+|+|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.0043  Score=38.83  Aligned_cols=24  Identities=29%  Similarity=0.544  Sum_probs=13.5

Q ss_pred             cccccCcCCccccChhHHHHHHHH
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      +||+|.+|..-.++.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            355555555555555555555554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.0041  Score=41.77  Aligned_cols=27  Identities=22%  Similarity=0.659  Sum_probs=23.3

Q ss_pred             CCCceecC---CCCcccChhHHHHHHHHhc
Q 010444          105 GTREYKCD---CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus       105 geKpykC~---Cgk~F~~kssL~~H~r~hh  131 (510)
                      .+|||.|.   |+.+|.+.+.|..|++.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47899995   9999999999999988875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.35  E-value=0.0043  Score=41.82  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=25.4

Q ss_pred             CCcccccccCcccCChHHHHHHHHhcC
Q 010444            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         3 ekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      .+.|+|.+|+|.|.+-+.|=-|++.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            578999999999999999999999996

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.0044  Score=38.87  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.1

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |||+|.+|...-...++|+.|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            79999999999999999999998764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0042  Score=38.80  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=22.5

Q ss_pred             cccccccCcccCChHHHHHHHHhc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      ||.|..|...|..+.+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999854

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.0053  Score=38.41  Aligned_cols=27  Identities=19%  Similarity=0.359  Sum_probs=24.5

Q ss_pred             CceecC-CCCcccChhHHHHHHHHhccc
Q 010444          107 REYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus       107 KpykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      +||+|+ |..-.+++++|.+|++..|+.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            699999 999999999999999987753

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.0048  Score=39.41  Aligned_cols=29  Identities=21%  Similarity=0.568  Sum_probs=19.1

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHh-hhccC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHF-SRKHG   78 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~-r~H~g   78 (510)
                      |||.|++.+|     .|+|...+...+|. |+|..
T Consensus         1 kPY~C~~~gC-----~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGC-----SKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTC-----CCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCCh-----hhhhcchhhhhhhccccccC
Confidence            4677777666     77777777666674 55543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.51  E-value=0.012  Score=36.07  Aligned_cols=23  Identities=26%  Similarity=0.612  Sum_probs=13.9

Q ss_pred             ccccCcCCccccChhHHHHHHHH
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      ||+|..|+|.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            45666666666666666666443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.007  Score=38.63  Aligned_cols=24  Identities=25%  Similarity=0.603  Sum_probs=17.6

Q ss_pred             CceecC---CCCcccChhHHHHHH-HHh
Q 010444          107 REYKCD---CGTIFSRRDSFITHR-AFC  130 (510)
Q Consensus       107 KpykC~---Cgk~F~~kssL~~H~-r~h  130 (510)
                      |||.|+   |.|.|+..+.-.+|+ |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            577786   888888877777776 544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.24  E-value=0.011  Score=35.41  Aligned_cols=22  Identities=27%  Similarity=0.659  Sum_probs=20.9

Q ss_pred             cccccccCcccCChHHHHHHHH
Q 010444            5 RFVCEICNKGFQRDQNLQLHRR   26 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r   26 (510)
                      ||+|.-|...|.++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.01  E-value=0.016  Score=35.57  Aligned_cols=24  Identities=33%  Similarity=0.625  Sum_probs=21.7

Q ss_pred             cccccccCcccCChHHHHHHHHhc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      ||+|..|+|.|-++.+|..|....
T Consensus         1 pf~c~kcgkcyfrkenllehearn   24 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEARN   24 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHC
T ss_pred             CCccccchhhhhhHhHHHHHHHHh
Confidence            799999999999999999997643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=93.97  E-value=0.014  Score=37.23  Aligned_cols=23  Identities=30%  Similarity=0.716  Sum_probs=21.2

Q ss_pred             cccccccCcccCChHHHHHHHHh
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRG   27 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~   27 (510)
                      ||.|.+|++.|.++.-|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            79999999999999999999754

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.79  E-value=0.016  Score=36.16  Aligned_cols=30  Identities=23%  Similarity=0.592  Sum_probs=20.2

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      |||.|.+-+|     .|.|.+...|.+|..+|++|
T Consensus         1 ~pfpc~~egc-----~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGC-----EKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSC-----CCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccc-----cccchhhhhhhhhhccccCC
Confidence            4666666655     77777777777777777654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.75  E-value=0.021  Score=35.52  Aligned_cols=28  Identities=18%  Similarity=0.412  Sum_probs=17.8

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      ..|.|..|       ...|+++..|+.|+..|++|
T Consensus         3 qvftcs~c-------qe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVC-------QETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSS-------CCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHH-------HHHHHHHHhheeeeecccCC
Confidence            45666666       66666666666666666653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=93.70  E-value=0.012  Score=37.56  Aligned_cols=22  Identities=14%  Similarity=0.496  Sum_probs=10.9

Q ss_pred             ccccCcCCccccChhHHHHHHH
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQK  102 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~r  102 (510)
                      ||.|.+|++.|++++-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            3445555555555555554443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.11  E-value=0.028  Score=37.63  Aligned_cols=30  Identities=13%  Similarity=0.526  Sum_probs=24.8

Q ss_pred             ccceeeCCCCCCCCCCCCCccCChhHHHhHhhhcc
Q 010444           43 RKRVYICPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (510)
Q Consensus        43 ~ekpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~   77 (510)
                      .+|||.|...+|     +.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC-----~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGC-----GQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTT-----CCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCc-----cccccchHHHHHhhhhhe
Confidence            378899988887     888888888888888775

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.87  E-value=0.034  Score=33.25  Aligned_cols=20  Identities=30%  Similarity=0.820  Sum_probs=10.5

Q ss_pred             ceecC-CCCcccChhHHHHHH
Q 010444          108 EYKCD-CGTIFSRRDSFITHR  127 (510)
Q Consensus       108 pykC~-Cgk~F~~kssL~~H~  127 (510)
                      ||+|. |...|..+..|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            45555 555555555555554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.82  E-value=0.025  Score=39.78  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=23.7

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      --|.|-+|+|.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999999884

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.031  Score=34.35  Aligned_cols=24  Identities=29%  Similarity=0.678  Sum_probs=22.0

Q ss_pred             cccccccCcccCChHHHHHHHHhc
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      .|+|+.|.....+++.|+.|+|.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            589999999999999999999854

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.60  E-value=0.04  Score=34.31  Aligned_cols=25  Identities=16%  Similarity=0.449  Sum_probs=14.1

Q ss_pred             CceecC---CCCcccChhHHHHHHHHhc
Q 010444          107 REYKCD---CGTIFSRRDSFITHRAFCD  131 (510)
Q Consensus       107 KpykC~---Cgk~F~~kssL~~H~r~hh  131 (510)
                      |||.|.   |.|.|..-..|.+|..+|.
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcccc
Confidence            455554   6666666666666655553

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.59  E-value=0.033  Score=33.46  Aligned_cols=23  Identities=30%  Similarity=0.647  Sum_probs=21.3

Q ss_pred             ccccccCcccCChHHHHHHHHhc
Q 010444            6 FVCEICNKGFQRDQNLQLHRRGH   28 (510)
Q Consensus         6 y~C~~CgK~F~~~s~Lk~H~r~H   28 (510)
                      |.|+.|-|.|.++.++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            89999999999999999998764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.02  E-value=0.042  Score=33.00  Aligned_cols=22  Identities=27%  Similarity=0.616  Sum_probs=15.1

Q ss_pred             cccCcCCccccChhHHHHHHHH
Q 010444           82 WKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        82 ~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      |.|++|-|.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.16  E-value=0.06  Score=35.01  Aligned_cols=26  Identities=31%  Similarity=0.853  Sum_probs=19.9

Q ss_pred             ceecC-CCCcccChhHHHHHHHHhccc
Q 010444          108 EYKCD-CGTIFSRRDSFITHRAFCDAL  133 (510)
Q Consensus       108 pykC~-Cgk~F~~kssL~~H~r~hh~~  133 (510)
                      .|.|. |+|.|.++..+.+|...|.+.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            47787 888888888888887777653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.10  E-value=0.061  Score=32.96  Aligned_cols=23  Identities=30%  Similarity=0.621  Sum_probs=16.4

Q ss_pred             ccccCcCCccccChhHHHHHHHH
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKT  103 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rt  103 (510)
                      +|.|+.|....+++++|+.|+|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            46677777777777777777765

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.96  E-value=0.067  Score=32.87  Aligned_cols=25  Identities=24%  Similarity=0.421  Sum_probs=23.3

Q ss_pred             cccccccCcccCChHHHHHHHHhcC
Q 010444            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         5 py~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      |-+|+.|......+..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999995

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.83  E-value=0.085  Score=35.28  Aligned_cols=25  Identities=12%  Similarity=0.502  Sum_probs=15.1

Q ss_pred             cccccCcCCccccChhHHHHHHHHh
Q 010444           80 KKWKCDKCSKKYAVQSDWKAHQKTC  104 (510)
Q Consensus        80 Kp~~C~~CgK~F~~ks~Lk~H~rth  104 (510)
                      |.|+|.+|+|.|..-..|=-|++.|
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTT
T ss_pred             CccCCCCCCCccCCcccccchHhhh
Confidence            4456666666666666666666555

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.70  E-value=0.095  Score=34.03  Aligned_cols=26  Identities=31%  Similarity=0.641  Sum_probs=22.3

Q ss_pred             CcccccccCcccCChHHHHHHHHhcC
Q 010444            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         4 kpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      -.|.|..|+|.|.++..+.+|-....
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcC
Confidence            35899999999999999999976544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.15  E-value=0.16  Score=35.57  Aligned_cols=26  Identities=19%  Similarity=0.477  Sum_probs=19.4

Q ss_pred             ccccCcCCccccChhHHHHHHHHhCC
Q 010444           81 KWKCDKCSKKYAVQSDWKAHQKTCGT  106 (510)
Q Consensus        81 p~~C~~CgK~F~~ks~Lk~H~rthge  106 (510)
                      .|.|..|+|.|+....|+.|...|+.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            46788888888888888877777654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.79  E-value=0.2  Score=32.52  Aligned_cols=28  Identities=14%  Similarity=0.447  Sum_probs=24.5

Q ss_pred             CCCcccccccCcccCChHHHHHHHHhcC
Q 010444            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (510)
Q Consensus         2 gekpy~C~~CgK~F~~~s~Lk~H~r~H~   29 (510)
                      ++..|+|.+|.+.|...+++-+|..+-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4567999999999999999999987654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.21  E-value=0.19  Score=31.58  Aligned_cols=30  Identities=30%  Similarity=0.619  Sum_probs=21.6

Q ss_pred             ceeeCCCCCCCCCCCCCccCChhHHHhHhhhccCC
Q 010444           45 RVYICPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (510)
Q Consensus        45 kpy~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H~ge   79 (510)
                      |.|.|...+|     +..|...-.|..|+..|++|
T Consensus         2 k~~iCsf~dC-----~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADC-----GAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGG-----CCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCc-----chhhccchhhhHHhhhhcCC
Confidence            4577777766     77777777777777777764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.94  E-value=0.35  Score=29.61  Aligned_cols=17  Identities=6%  Similarity=0.047  Sum_probs=10.1

Q ss_pred             CCccCChhHHHhHhhhc
Q 010444           60 ARALGDLTGIKKHFSRK   76 (510)
Q Consensus        60 ~k~F~~~s~Lk~H~r~H   76 (510)
                      .+...++..|+.|.|+|
T Consensus         9 syscsskaalrvh~rih   25 (28)
T d1x5wa1           9 SYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SCEESSHHHHHHHHGGG
T ss_pred             ccccCcHHHHHHhhccc
Confidence            55555666666666555

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.83  E-value=0.36  Score=29.91  Aligned_cols=24  Identities=21%  Similarity=0.592  Sum_probs=17.7

Q ss_pred             CceecC---CCCcccChhHHHHHHHHh
Q 010444          107 REYKCD---CGTIFSRRDSFITHRAFC  130 (510)
Q Consensus       107 KpykC~---Cgk~F~~kssL~~H~r~h  130 (510)
                      |.|+|+   |..+|.++..+++|...-
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrf   27 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRF   27 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhh
Confidence            457786   888888888888886443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.25  E-value=0.6  Score=32.46  Aligned_cols=31  Identities=13%  Similarity=0.206  Sum_probs=22.3

Q ss_pred             CCcccccCcCCccccChhHHHHHHHH-hCCCc
Q 010444           78 GEKKWKCDKCSKKYAVQSDWKAHQKT-CGTRE  108 (510)
Q Consensus        78 geKp~~C~~CgK~F~~ks~Lk~H~rt-hgeKp  108 (510)
                      .+.|-.|++|+....+..+|++|+.. |-.||
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            45677788887777777788887776 65444