Citrus Sinensis ID: 010482
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 509 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SAK4 | 528 | Succinate-semialdehyde de | yes | no | 0.998 | 0.962 | 0.762 | 0.0 | |
| B9F3B6 | 527 | Succinate-semialdehyde de | yes | no | 0.929 | 0.897 | 0.799 | 0.0 | |
| P25526 | 482 | Succinate-semialdehyde de | N/A | no | 0.929 | 0.981 | 0.575 | 1e-166 | |
| P51650 | 523 | Succinate-semialdehyde de | yes | no | 0.919 | 0.894 | 0.580 | 1e-157 | |
| Q8BWF0 | 523 | Succinate-semialdehyde de | yes | no | 0.919 | 0.894 | 0.575 | 1e-155 | |
| Q3MSM3 | 535 | Succinate-semialdehyde de | N/A | no | 0.919 | 0.874 | 0.586 | 1e-150 | |
| Q6A2H2 | 535 | Succinate-semialdehyde de | N/A | no | 0.919 | 0.874 | 0.582 | 1e-150 | |
| P51649 | 535 | Succinate-semialdehyde de | yes | no | 0.919 | 0.874 | 0.582 | 1e-149 | |
| Q6A2H1 | 535 | Succinate-semialdehyde de | N/A | no | 0.919 | 0.874 | 0.582 | 1e-149 | |
| Q3MSM4 | 535 | Succinate-semialdehyde de | N/A | no | 0.919 | 0.874 | 0.582 | 1e-149 |
| >sp|Q9SAK4|SSDH_ARATH Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/527 (76%), Positives = 458/527 (86%), Gaps = 19/527 (3%)
Query: 1 MTLSGVARVAFVGSRRIFASHLP-----------SMQSYTPA--------FSRQGLIGGK 41
M + ARVA G R++ +SH SM + + + QGLIGGK
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLLLVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIGGK 60
Query: 42 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 101
W+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK LR+
Sbjct: 61 WLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRR 120
Query: 102 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDR 161
WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L DR
Sbjct: 121 WYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDR 180
Query: 162 RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ 221
RL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELALQ
Sbjct: 181 RLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQ 240
Query: 222 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 281
AG+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKKVSLELGG
Sbjct: 241 AGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLELGG 300
Query: 282 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 341
NAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L+V
Sbjct: 301 NAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEV 360
Query: 342 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKS 401
GDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+ +V
Sbjct: 361 GDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDVSD 420
Query: 402 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 461
M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYGLV
Sbjct: 421 NMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYGLV 480
Query: 462 GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508
GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 481 GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
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Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/473 (79%), Positives = 430/473 (90%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
QGLIGGKW+DAYDGKT+EV NPATGE +ANVSCMG KET DAI+SA F SWSKLTA E
Sbjct: 55 QGLIGGKWVDAYDGKTIEVQNPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANE 114
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RSK LRKW+DL+++HKEEL L+TLEQGKP+KEA+ EV YGA FIE++AEEAKR+YG+II
Sbjct: 115 RSKALRKWHDLIISHKEELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDII 174
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P TL DRRL VLKQPVGV GA+TPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA
Sbjct: 175 PPTLSDRRLLVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 234
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AA+LALQAGIP G +NVVMGNAP+IGDALL S QVRKITFTGSTAVGKKLMAG+A TVKK
Sbjct: 235 AADLALQAGIPAGAINVVMGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGSANTVKK 294
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VSLELGGNAPCIVFDDAD++VA+ G+LAAKFRNSGQTCVCANR+LVQEGIYEKFA AF K
Sbjct: 295 VSLELGGNAPCIVFDDADIDVAIKGSLAAKFRNSGQTCVCANRILVQEGIYEKFASAFIK 354
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV++LKVG+G E QGPLIN+AA++KVE F+ DA SKGA ++LGG+RHSLGM+FYEPT
Sbjct: 355 AVQSLKVGNGLEESTSQGPLINEAAVQKVEKFINDATSKGANIMLGGKRHSLGMSFYEPT 414
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V+ NV ++ML+ REEVFGPVAPL+ FKTEE+AI MANDTNAGLAAYIFT ++ R+WRVSE
Sbjct: 415 VVGNVSNDMLLFREEVFGPVAPLVPFKTEEDAIRMANDTNAGLAAYIFTKSIPRSWRVSE 474
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
ALEYGLVGVNEG+ISTEVAPFGGVKQSGLGREGSKYGMDE+LE+KY+C+G++N
Sbjct: 475 ALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYICMGNLN 527
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Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P25526|GABD_ECOLI Succinate-semialdehyde dehydrogenase [NADP(+)] GabD OS=Escherichia coli (strain K12) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 583 bits (1504), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/473 (57%), Positives = 360/473 (76%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
F +Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A +W LT
Sbjct: 9 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALT 68
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AEE KR+YG
Sbjct: 69 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG 128
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP +
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
ALA AELA++AG+P GV NVV G+A +G+ L ++P VRK++FTGST +G++LM A
Sbjct: 189 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 248
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+Y++FA+
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+AV L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H G F+
Sbjct: 309 LQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 368
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY + +L R +R
Sbjct: 369 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 428
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
V EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 429 VGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
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Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. It appears to be important for nitrogen metabolism under N limitation conditions. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P51650|SSDH_RAT Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/474 (58%), Positives = 357/474 (75%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ T V++PA+G + V+ G E + A+ +A+DAF+SW +++ ERS
Sbjct: 52 FVGGRWLPT--PATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEISVKERS 109
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWYDL++ +K+EL ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 110 SLLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVYGDIIYT 169
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
+ D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 170 SAKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALA 229
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
+LA QAGIPPGV NV+ A ++G+ L T P V KI+FTGSTA GK L+ AA +VK
Sbjct: 230 QLANQAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVK 289
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI++ F F+
Sbjct: 290 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFA 349
Query: 334 KAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+ K+L+VG+GF EG QGPLIN+ A+EKVE V DAV+KGA V+ GG+RH G F+E
Sbjct: 350 EAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGNFFE 409
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+LSNV +ML EE FGPVAP++ F EEEA+ +AN + GLA Y ++ + + WRV
Sbjct: 410 PTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIWRV 469
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 470 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q8BWF0|SSDH_MOUSE Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/474 (57%), Positives = 355/474 (74%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ A T V++PA+G + V+ G E + A+ +A+DAFNSW ++ ERS
Sbjct: 52 FVGGRWLPA--PATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFNSWKGVSVKERS 109
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R+YG+II
Sbjct: 110 LLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSALFLEWFSEEARRIYGDIIYT 169
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
+ D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 170 SAKDKRGLVLKQPVGVAAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALA 229
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
+LA QAGIP GV NV+ A ++G+ L T P V KI+FTGSTA GK L+ AA +VK
Sbjct: 230 QLANQAGIPAGVYNVIPCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVK 289
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI++ F F+
Sbjct: 290 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFA 349
Query: 334 KAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+ K+L+VG+GF EG QGPLIN+ A+EKVE V DAV+KGA V+ GG+RH G F+E
Sbjct: 350 EAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQSGGNFFE 409
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+LSNV +ML EE FGP+AP++ F EEEA+ +AN GLA Y ++ + + WRV
Sbjct: 410 PTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIWRV 469
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 470 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM3|SSDH_HYLLA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1372), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/474 (58%), Positives = 359/474 (75%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW +++A ERS
Sbjct: 64 FVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKERS 121
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 122 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYT 181
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 182 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 241
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
ELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK
Sbjct: 242 ELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 301
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GALA+KFRN+GQTCVC+NR LVQ GI++ F AF+
Sbjct: 302 RVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAFA 361
Query: 334 KAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+K NL VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH LG F+E
Sbjct: 362 EAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFE 421
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV
Sbjct: 422 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 481
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 482 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Hylobates lar (taxid: 9580) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H2|SSDH_PONPY Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/474 (58%), Positives = 359/474 (75%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW +++A ERS
Sbjct: 64 FVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKERS 121
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 122 SLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYT 181
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 182 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 241
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
ELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK
Sbjct: 242 ELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 301
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF+
Sbjct: 302 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 361
Query: 334 KAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH LG F+E
Sbjct: 362 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFE 421
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV
Sbjct: 422 PTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 481
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 482 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pongo pygmaeus (taxid: 9600) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P51649|SSDH_HUMAN Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/474 (58%), Positives = 359/474 (75%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W +++A ERS
Sbjct: 64 FVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS 121
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 122 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHT 181
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 182 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 241
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
ELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK
Sbjct: 242 ELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 301
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF+
Sbjct: 302 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 361
Query: 334 KAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG F+E
Sbjct: 362 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFE 421
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV
Sbjct: 422 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 481
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 482 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H1|SSDH_GORGO Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/474 (58%), Positives = 359/474 (75%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W +++A ERS
Sbjct: 64 FVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS 121
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 122 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYT 181
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 182 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 241
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
ELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK
Sbjct: 242 ELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 301
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF+
Sbjct: 302 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 361
Query: 334 KAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG F+E
Sbjct: 362 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFE 421
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV
Sbjct: 422 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 481
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 482 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Gorilla gorilla gorilla (taxid: 9595) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM4|SSDH_PANPA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/474 (58%), Positives = 359/474 (75%), Gaps = 6/474 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W +++A ERS
Sbjct: 64 FVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCCWREVSAKERS 121
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 122 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYT 181
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +ALA A
Sbjct: 182 PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALA 241
Query: 217 ELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
ELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK
Sbjct: 242 ELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 301
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF+
Sbjct: 302 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 361
Query: 334 KAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG F+E
Sbjct: 362 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFE 421
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV
Sbjct: 422 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 481
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 482 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pan paniscus (taxid: 9597) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 509 | ||||||
| 350538647 | 522 | succinic semialdehyde dehydrogenase [Sol | 0.996 | 0.971 | 0.785 | 0.0 | |
| 449444298 | 541 | PREDICTED: succinate-semialdehyde dehydr | 0.933 | 0.878 | 0.831 | 0.0 | |
| 356555230 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.931 | 0.882 | 0.824 | 0.0 | |
| 356528645 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.964 | 0.914 | 0.792 | 0.0 | |
| 255577875 | 607 | succinate semialdehyde dehydrogenase, pu | 0.917 | 0.769 | 0.862 | 0.0 | |
| 224109088 | 536 | predicted protein [Populus trichocarpa] | 0.933 | 0.886 | 0.846 | 0.0 | |
| 15219379 | 528 | succinate-semialdehyde dehydrogenase [Ar | 0.998 | 0.962 | 0.762 | 0.0 | |
| 297842727 | 527 | ALDH5F1 [Arabidopsis lyrata subsp. lyrat | 0.998 | 0.963 | 0.758 | 0.0 | |
| 297736107 | 525 | unnamed protein product [Vitis vinifera] | 0.929 | 0.900 | 0.826 | 0.0 | |
| 225462297 | 530 | PREDICTED: succinate-semialdehyde dehydr | 0.929 | 0.892 | 0.826 | 0.0 |
| >gi|350538647|ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] gi|171854593|dbj|BAG16487.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/513 (78%), Positives = 456/513 (88%), Gaps = 6/513 (1%)
Query: 1 MTLSGVA---RVAFVGSRRIFASHLPSMQ---SYTPAFSRQGLIGGKWIDAYDGKTLEVH 54
M LS A R + G R+ + S+ S + Q LIGGKW+DAYDGKT++VH
Sbjct: 10 MALSACAMLYRSSISGPVRLMTTDTQSVAAKLSSSGLLRSQALIGGKWVDAYDGKTIKVH 69
Query: 55 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114
NPATGEVI +V CMGG+ET DAISSA+DAF+SWSKLTAAERS+ LRKWYDL+MAHKEELG
Sbjct: 70 NPATGEVITDVPCMGGRETNDAISSAYDAFSSWSKLTAAERSRYLRKWYDLIMAHKEELG 129
Query: 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAG 174
QL+TLEQGKPLKEA+GEV YGA FIEF AEE KR+YG+IIP+ L DRRLFVLKQPVGV G
Sbjct: 130 QLMTLEQGKPLKEAIGEVSYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGVVG 189
Query: 175 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 234
AITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMG
Sbjct: 190 AITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMG 249
Query: 235 NAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLN 294
NAPDIGDALL SPQVRKITFTGST VGKKLM GAA TVKKVSLELGGNAPCI+FDDADL
Sbjct: 250 NAPDIGDALLASPQVRKITFTGSTKVGKKLMEGAAATVKKVSLELGGNAPCIIFDDADLE 309
Query: 295 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354
VA+ GALA KFRN+GQTCVCANR+LVQEGIY+KFA+AF+KAV+N+KVGDGF EGV QGPL
Sbjct: 310 VALKGALATKFRNTGQTCVCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQGPL 369
Query: 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 414
IN+AA++KVE FV++A SKGAKVL+GG+RHSLGMTFYEPTV++ V SEML+++EEVFGPV
Sbjct: 370 INEAAVQKVEYFVDEATSKGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFGPV 429
Query: 415 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 474
APLL FKT+EEAI MANDTNAGLAAYIF+ N++R WRV+EALEYG+VGVNEGL+STEVAP
Sbjct: 430 APLLKFKTDEEAIQMANDTNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAP 489
Query: 475 FGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
FGGVKQSGLGREGSKYGMDE+LE+KYVCLG M+
Sbjct: 490 FGGVKQSGLGREGSKYGMDEYLEMKYVCLGSMS 522
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444298|ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/475 (83%), Positives = 443/475 (93%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
QGLIGGKWIDAYDGKTL+V NPA GEVI NV MG +ET DAISSA+DAF SWSKLTAA+
Sbjct: 67 QGLIGGKWIDAYDGKTLKVQNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAAD 126
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RS LRKWY+LLMAHKEELGQLITLEQGKPLKEA+GE +YGA FIEF++EEAKRVYG+II
Sbjct: 127 RSNRLRKWYELLMAHKEELGQLITLEQGKPLKEALGETNYGASFIEFFSEEAKRVYGDII 186
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
T+ DRRL VLKQPVGV G ITPWNFPLAMITRKVGPALA GCTVV+KPSE TPLTALA
Sbjct: 187 SPTIADRRLLVLKQPVGVVGIITPWNFPLAMITRKVGPALASGCTVVIKPSELTPLTALA 246
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AAEL+LQAGIPPGVVNVVMG+AP IGDA+L S QVRKITFTGSTAVGKKLMAGAAGTVK+
Sbjct: 247 AAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKR 306
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VS ELGGNAPCI+FDDAD++VAV G++AAKFRNSGQTCVCANR+LVQEGIYEKF +AFSK
Sbjct: 307 VSFELGGNAPCIIFDDADVDVAVKGSIAAKFRNSGQTCVCANRILVQEGIYEKFTNAFSK 366
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV+NL+VGDGFGEGV QGPLIN+AA++KVE F++DA +KGAKVLLGG+RHSLGMTF+EPT
Sbjct: 367 AVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHSLGMTFFEPT 426
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V++ VKS+ML+SREEVFGPVAPLL F+TEEEAI +ANDTNAGLAAYIFTNN+QR+WRV+E
Sbjct: 427 VVAGVKSDMLLSREEVFGPVAPLLPFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTE 486
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 509
ALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LE+KYVCLG+M+R+
Sbjct: 487 ALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYVCLGNMDRQ 541
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555230|ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/474 (82%), Positives = 438/474 (92%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
QGLIGGKW DAYDGKT++V+NPATGE I +V+CMGG+ET DAIS+A+DA+ SWSK TAAE
Sbjct: 63 QGLIGGKWSDAYDGKTIKVYNPATGESIVDVACMGGRETNDAISAAYDAYGSWSKTTAAE 122
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RSK LRKWYDLLM HKEEL QLITLEQGKPLKE+VGE++YGA FIEF AEEAKR+YG+II
Sbjct: 123 RSKFLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEINYGAGFIEFAAEEAKRIYGDII 182
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
PA L DRRLFVLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALA
Sbjct: 183 PAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 242
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AAEL++QAGIPPGVVNVVMGNAPDIGDALL SPQVRKITFTGSTAVGKKLMAG+A TVKK
Sbjct: 243 AAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKK 302
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VSLELGGNAPCIVFDDADL+VAV G LAAKFRNSGQTCVCANR++VQEGIYEKFA+A
Sbjct: 303 VSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALRD 362
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
V+N+KVGDGF EGV QGPLIN+AA++KVE+ + DA SKGAKV+LGG+RHSLG TFYEPT
Sbjct: 363 TVQNMKVGDGFSEGVAQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGFTFYEPT 422
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V+S+V S+M +SREE FGPVAPLL FKTEE+AI +ANDTNAGL +YIFTN++QR+WRV+E
Sbjct: 423 VISDVNSDMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYIFTNSIQRSWRVAE 482
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508
ALEYGLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGMDE+LEIKYVCLG+M++
Sbjct: 483 ALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMHK 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528645|ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/491 (79%), Positives = 441/491 (89%)
Query: 19 ASHLPSMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 78
A + S + + QGLI GKW DAYDGKT++V+NPATGE + +V+CMGG+ET DAIS
Sbjct: 47 AQSIASQLNSSGLLRTQGLIAGKWSDAYDGKTIKVYNPATGESVVDVACMGGRETNDAIS 106
Query: 79 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 138
+A+DA+ SWSK TAAERSK LRKWYDLLM HKEEL QLITLEQGKPLKE+VGE+ YGA F
Sbjct: 107 AAYDAYGSWSKTTAAERSKLLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEIVYGAGF 166
Query: 139 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 198
IEF AEEAKR+YG+I+PA DRRLFVLKQPVGV GAITPWNFPLAMITRKVGPALACGC
Sbjct: 167 IEFAAEEAKRIYGDIVPAPFSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGC 226
Query: 199 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258
TVV+KPSE TPLTALAA EL++QAGIPPGVVNVVMGNAPDIGDALL SPQVRKITFTGST
Sbjct: 227 TVVIKPSELTPLTALAAVELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGST 286
Query: 259 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 318
AVGKKLMAG+A TVKKVSLELGGNAPCIVFDDADL+VAV G LAAKFRNSGQTCVCANR+
Sbjct: 287 AVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRI 346
Query: 319 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378
+VQEGIYEKFA+A AV+N+KVGDGF EGV QGPLIN+AA++KVE+ + DA SKGAKV+
Sbjct: 347 IVQEGIYEKFANALRDAVQNMKVGDGFSEGVSQGPLINEAAVKKVESLIHDATSKGAKVI 406
Query: 379 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438
LGG+RHSLG+TFYEPTV+S+V S+M +SREE FGPVAPLL FKTEEEAI +ANDTNAGL
Sbjct: 407 LGGKRHSLGLTFYEPTVISDVNSDMHISREEAFGPVAPLLRFKTEEEAIRIANDTNAGLG 466
Query: 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 498
+Y+FTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGMDE+LEI
Sbjct: 467 SYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEI 526
Query: 499 KYVCLGDMNRK 509
KYVC G+MN++
Sbjct: 527 KYVCFGNMNKE 537
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577875|ref|XP_002529810.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] gi|223530687|gb|EEF32559.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/467 (86%), Positives = 441/467 (94%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
QGLIGGKW DAYDGKT++VHNPATGEVIA+V CMGG ETKDAISSA DAF SWSKLTA+E
Sbjct: 130 QGLIGGKWTDAYDGKTIQVHNPATGEVIADVPCMGGNETKDAISSAHDAFQSWSKLTASE 189
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RSK LR+W+DLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIEF+AEEAKRVYG+II
Sbjct: 190 RSKHLRRWFDLLIAHKEELGQLITLEQGKPLKEAIGEVSYGASFIEFFAEEAKRVYGDII 249
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
PATL DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVVVKPSE TPLTALA
Sbjct: 250 PATLGDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVVKPSELTPLTALA 309
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AAELALQAGIPPGV+N+VMG APDIGDALL SPQVRKITFTGSTAVGKKLM GAA TVK+
Sbjct: 310 AAELALQAGIPPGVLNLVMGKAPDIGDALLASPQVRKITFTGSTAVGKKLMEGAARTVKR 369
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VSLELGGNAPCIVFDDADL+VAV G+LAAKFRNSGQTCVCANR++VQEGIY+KFA+ FS+
Sbjct: 370 VSLELGGNAPCIVFDDADLDVAVKGSLAAKFRNSGQTCVCANRLIVQEGIYDKFAETFSR 429
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV+NL+VGDGF EGV QGPLIN+AAL+KVE+FV+DA+SKGAKVL+GG+RHSLG TFYEPT
Sbjct: 430 AVQNLQVGDGFTEGVAQGPLINEAALQKVESFVQDAISKGAKVLIGGKRHSLGRTFYEPT 489
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V+S+VKSEM+VSREEVFGPVAP+L FKTEEEAI +ANDTNAGLAAYIFTNN QR+WRV+E
Sbjct: 490 VISDVKSEMVVSREEVFGPVAPILRFKTEEEAISIANDTNAGLAAYIFTNNTQRSWRVAE 549
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LE+ V
Sbjct: 550 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEVSIV 596
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109088|ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/475 (84%), Positives = 445/475 (93%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
QGLI GKW+DA DG T++V NPATGEV+A V CMG ET +AISSA+DAF SWSKLTA+E
Sbjct: 62 QGLIDGKWVDANDGDTIKVLNPATGEVVAIVPCMGQSETNNAISSAYDAFRSWSKLTASE 121
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RS+ +RKWYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIEFYAEEAKRVYG+II
Sbjct: 122 RSQRIRKWYDLLIAHKEELGQLITLEQGKPLKEAMGEVSYGASFIEFYAEEAKRVYGDII 181
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
PATL DRRLFVLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALA
Sbjct: 182 PATLGDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVLKPSELTPLTALA 241
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AAELALQAGIPPGV+NVVMG APDIGDALL S +VRKITFTGSTAVGKKLMAGAAGTVK+
Sbjct: 242 AAELALQAGIPPGVLNVVMGKAPDIGDALLASHEVRKITFTGSTAVGKKLMAGAAGTVKR 301
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
+SLELGGNAPCIVFDDADL+VAV G+LAAKFRNSGQTCVCANR++VQEGIY+KFAD+FSK
Sbjct: 302 LSLELGGNAPCIVFDDADLDVAVKGSLAAKFRNSGQTCVCANRIIVQEGIYDKFADSFSK 361
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV++++VGDGF EGV QGPLIN+AA++KVE+FV+DA+ KGAKVLLGG+RHSLGM FYEPT
Sbjct: 362 AVQSMQVGDGFSEGVTQGPLINEAAVQKVESFVQDAIFKGAKVLLGGKRHSLGMNFYEPT 421
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
++SNV ML+SREEVFGPVAPLL FKTEEEAI MAN+T AGLAAYIFTNN+QR+WRV+E
Sbjct: 422 IISNVTEAMLLSREEVFGPVAPLLRFKTEEEAILMANNTKAGLAAYIFTNNVQRSWRVTE 481
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 509
ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LE+KYVCLGDMNRK
Sbjct: 482 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEMKYVCLGDMNRK 536
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219379|ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] gi|118575126|sp|Q9SAK4.2|SSDH_ARATH RecName: Full=Succinate-semialdehyde dehydrogenase, mitochondrial; Short=At-SSADH1; AltName: Full=Aldehyde dehydrogenase family 5 member F1; AltName: Full=NAD(+)-dependent succinic semialdehyde dehydrogenase; Flags: Precursor gi|6684442|gb|AAF23590.1|AF117335_1 succinic semialdehyde dehydrogenase [Arabidopsis thaliana] gi|16226915|gb|AAL16297.1|AF428367_1 At1g79440/T8K14_14 [Arabidopsis thaliana] gi|15810165|gb|AAL07226.1| putative succinic semialdehyde dehydrogenase gabD [Arabidopsis thaliana] gi|332198122|gb|AEE36243.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/527 (76%), Positives = 458/527 (86%), Gaps = 19/527 (3%)
Query: 1 MTLSGVARVAFVGSRRIFASHLP-----------SMQSYTPA--------FSRQGLIGGK 41
M + ARVA G R++ +SH SM + + + QGLIGGK
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLLLVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIGGK 60
Query: 42 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 101
W+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK LR+
Sbjct: 61 WLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRR 120
Query: 102 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDR 161
WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L DR
Sbjct: 121 WYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDR 180
Query: 162 RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ 221
RL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELALQ
Sbjct: 181 RLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQ 240
Query: 222 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 281
AG+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKKVSLELGG
Sbjct: 241 AGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLELGG 300
Query: 282 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 341
NAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L+V
Sbjct: 301 NAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEV 360
Query: 342 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKS 401
GDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+ +V
Sbjct: 361 GDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDVSD 420
Query: 402 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 461
M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYGLV
Sbjct: 421 NMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYGLV 480
Query: 462 GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508
GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 481 GVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842727|ref|XP_002889245.1| ALDH5F1 [Arabidopsis lyrata subsp. lyrata] gi|297335086|gb|EFH65504.1| ALDH5F1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/526 (75%), Positives = 455/526 (86%), Gaps = 18/526 (3%)
Query: 1 MTLSGVARVAFVGSRRIFASHLP----------SMQSYTPA--------FSRQGLIGGKW 42
M + ARVA G R++ +SH SM + + + QGLIGGKW
Sbjct: 1 MVIGAAARVAIGGCRKLVSSHTSLLVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIGGKW 60
Query: 43 IDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKW 102
ID+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK LR+W
Sbjct: 61 IDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKILRRW 120
Query: 103 YDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRR 162
YDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L DRR
Sbjct: 121 YDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRR 180
Query: 163 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 222
L VLKQPVGV GAI PWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELALQA
Sbjct: 181 LLVLKQPVGVVGAIAPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQA 240
Query: 223 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGN 282
G+PP +NVVMGNAP+IGDALL+S QVRKITFTGSTAVGKKLMA AA TVKKVSLELGGN
Sbjct: 241 GVPPVALNVVMGNAPEIGDALLSSRQVRKITFTGSTAVGKKLMAAAAPTVKKVSLELGGN 300
Query: 283 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 342
AP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L+VG
Sbjct: 301 APSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVG 360
Query: 343 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 402
DGF EG QGPLIN AA++KV+TF +DAVSKGAK++LGG+RHSLG TFYEPTV+ +V ++
Sbjct: 361 DGFKEGTTQGPLINDAAVQKVQTFQQDAVSKGAKIILGGKRHSLGSTFYEPTVIRDVSND 420
Query: 403 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 462
ML+S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYGLVG
Sbjct: 421 MLMSKEEIFGPVAPLIRFKTEEDAIRLANDTIAGLAAYIFTNSVQRSWRVFEALEYGLVG 480
Query: 463 VNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508
VNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 481 VNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 526
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736107|emb|CBI24145.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/473 (82%), Positives = 439/473 (92%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
Q LIGGKW +AYDGKT+ VHNPATG+V+ NV CMGG+ET DAIS A++AF SWSKLTAAE
Sbjct: 51 QCLIGGKWTEAYDGKTIPVHNPATGDVLVNVPCMGGQETNDAISVAYEAFLSWSKLTAAE 110
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RSK LRKWYDLL+A+KEELGQ+ITLEQGKPLKEA+GEV+YGA FIEF AEEAKR+YG+II
Sbjct: 111 RSKRLRKWYDLLIANKEELGQIITLEQGKPLKEAIGEVNYGAAFIEFSAEEAKRIYGDII 170
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P+ L DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALA
Sbjct: 171 PSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 230
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AAELALQAGIPPG VNVV GNAP+IGDALL S QVRKITFTGSTAVGKKLMAGAA TVKK
Sbjct: 231 AAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVRKITFTGSTAVGKKLMAGAAQTVKK 290
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VSLELGGNAPCI+FDDADL VAV GAL KFRNSGQTCVCANR+LVQEGIYEKFA AFS+
Sbjct: 291 VSLELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQTCVCANRILVQEGIYEKFAIAFSQ 350
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV++++VG+GF EGVVQGPLIN+AA++KVE+FV+DAVSKGAKVLLGG+RHSLGMTFYEPT
Sbjct: 351 AVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLLGGKRHSLGMTFYEPT 410
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V+ ++K++ML++R EVFGPVAPLL FKTEEEAI +ANDTNAGLAAY+FT N+QR WRV+E
Sbjct: 411 VIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTNAGLAAYVFTENVQRMWRVTE 470
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
ALEYGLVGVNEGL+STEVAPFGGVK+SGLGREGSKYGMDEFLE+KYVC G+++
Sbjct: 471 ALEYGLVGVNEGLVSTEVAPFGGVKESGLGREGSKYGMDEFLEMKYVCFGNIS 523
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462297|ref|XP_002265514.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/473 (82%), Positives = 439/473 (92%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
Q LIGGKW +AYDGKT+ VHNPATG+V+ NV CMGG+ET DAIS A++AF SWSKLTAAE
Sbjct: 56 QCLIGGKWTEAYDGKTIPVHNPATGDVLVNVPCMGGQETNDAISVAYEAFLSWSKLTAAE 115
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RSK LRKWYDLL+A+KEELGQ+ITLEQGKPLKEA+GEV+YGA FIEF AEEAKR+YG+II
Sbjct: 116 RSKRLRKWYDLLIANKEELGQIITLEQGKPLKEAIGEVNYGAAFIEFSAEEAKRIYGDII 175
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P+ L DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALA
Sbjct: 176 PSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALA 235
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AAELALQAGIPPG VNVV GNAP+IGDALL S QVRKITFTGSTAVGKKLMAGAA TVKK
Sbjct: 236 AAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVRKITFTGSTAVGKKLMAGAAQTVKK 295
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VSLELGGNAPCI+FDDADL VAV GAL KFRNSGQTCVCANR+LVQEGIYEKFA AFS+
Sbjct: 296 VSLELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQTCVCANRILVQEGIYEKFAIAFSQ 355
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV++++VG+GF EGVVQGPLIN+AA++KVE+FV+DAVSKGAKVLLGG+RHSLGMTFYEPT
Sbjct: 356 AVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLLGGKRHSLGMTFYEPT 415
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V+ ++K++ML++R EVFGPVAPLL FKTEEEAI +ANDTNAGLAAY+FT N+QR WRV+E
Sbjct: 416 VIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTNAGLAAYVFTENVQRMWRVTE 475
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
ALEYGLVGVNEGL+STEVAPFGGVK+SGLGREGSKYGMDEFLE+KYVC G+++
Sbjct: 476 ALEYGLVGVNEGLVSTEVAPFGGVKESGLGREGSKYGMDEFLEMKYVCFGNIS 528
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 509 | ||||||
| TAIR|locus:2206405 | 528 | ALDH5F1 "AT1G79440" [Arabidops | 0.931 | 0.897 | 0.797 | 1.1e-209 | |
| UNIPROTKB|Q9I6M5 | 483 | gabD "Succinate-semialdehyde d | 0.929 | 0.979 | 0.566 | 2.1e-148 | |
| UNIPROTKB|P25526 | 482 | gabD [Escherichia coli K-12 (t | 0.929 | 0.981 | 0.558 | 5.7e-146 | |
| UNIPROTKB|E1BDP3 | 526 | ALDH5A1 "Uncharacterized prote | 0.921 | 0.891 | 0.576 | 2.2e-144 | |
| TIGR_CMR|SO_1275 | 482 | SO_1275 "succinate-semialdehyd | 0.931 | 0.983 | 0.576 | 2.8e-144 | |
| UNIPROTKB|Q88RC0 | 480 | gabD "Succinate-semialdehyde d | 0.923 | 0.979 | 0.561 | 2e-143 | |
| UNIPROTKB|F1RUE3 | 537 | ALDH5A1 "Uncharacterized prote | 0.921 | 0.873 | 0.566 | 9.9e-142 | |
| UNIPROTKB|E1BRI3 | 516 | ALDH5A1 "Uncharacterized prote | 0.931 | 0.918 | 0.559 | 1.6e-141 | |
| UNIPROTKB|Q3MSM3 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.917 | 0.872 | 0.568 | 2.6e-141 | |
| UNIPROTKB|Q6A2H2 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.917 | 0.872 | 0.564 | 5.5e-141 |
| TAIR|locus:2206405 ALDH5F1 "AT1G79440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2002 (709.8 bits), Expect = 1.1e-209, Sum P(2) = 1.1e-209
Identities = 378/474 (79%), Positives = 427/474 (90%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
QGLIGGKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA E
Sbjct: 54 QGLIGGKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGE 113
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
RSK LR+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+II
Sbjct: 114 RSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDII 173
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXX 214
P L DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TP
Sbjct: 174 PPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALA 233
Query: 215 XXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
G+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKK
Sbjct: 234 AAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKK 293
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VSLELGGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+
Sbjct: 294 VSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSE 353
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 394
AV+ L+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPT
Sbjct: 354 AVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPT 413
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
V+ +V M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV E
Sbjct: 414 VIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFE 473
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508
ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 474 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
|
| UNIPROTKB|Q9I6M5 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
Identities = 268/473 (56%), Positives = 354/473 (74%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
F +Q + G W+DA +G+T++V+NPATGE+I +V MG ET+ AI +A A +W LT
Sbjct: 9 FRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKALPAWRALT 68
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LR+W+DL++ ++++L +L+T+EQGKPL EA GE+ Y A F+E++ EEAKR+YG
Sbjct: 69 AKERANKLRRWFDLMIENQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFGEEAKRIYG 128
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 211
+ IP PD+R+ V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP
Sbjct: 129 DTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLKPASQTPYS 188
Query: 212 XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
GIP GV +VV G+A ++G L ++P VRK+TFTGST +G++LMA A
Sbjct: 189 ALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQLMAECAQD 248
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+KKVSLELGGNAP IVFDDADL+ AV GAL +K+RN+GQTCVCANR+ VQ+G+Y+ F D
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDGVYDAFVDK 308
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
AV L +G+G GV GPLI+ A+ KVE + DAVSKGAKV+ GG+ H+LG TF+
Sbjct: 309 LKAAVAKLNIGNGLEAGVTTGPLIDAKAVAKVEEHIADAVSKGAKVVSGGKPHALGGTFF 368
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPT+L +V LVS++E FGP+AP+ FK E E I M+NDT GLA+Y + +L R +R
Sbjct: 369 EPTILVDVPKNALVSKDETFGPLAPVFRFKDEAEVIAMSNDTEFGLASYFYARDLARVFR 428
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
V+E LEYG+VG+N GLIS EVAPFGG+K SGLGREGSKYG++++LEIKY+CLG
Sbjct: 429 VAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLG 481
|
|
| UNIPROTKB|P25526 gabD [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 264/473 (55%), Positives = 349/473 (73%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
F +Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A +W LT
Sbjct: 9 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALT 68
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AEE KR+YG
Sbjct: 69 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG 128
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 211
+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 212 XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
G+P GV NVV G+A +G+ L ++P VRK++FTGST +G++LM A
Sbjct: 189 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 248
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+Y++FA+
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+AV L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H G F+
Sbjct: 309 LQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 368
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY + +L R +R
Sbjct: 369 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 428
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
V EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 429 VGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
|
|
| UNIPROTKB|E1BDP3 ALDH5A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 274/475 (57%), Positives = 349/475 (73%)
Query: 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
G +GG W+ A T VH+PA+G + V+ G E + A+ +A++AF SW ++A ER
Sbjct: 54 GFVGGLWVSA--AATFPVHDPASGAELGLVADCGVPEARAAVRAAYEAFCSWRGVSAKER 111
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
S LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 112 SSLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWFSEEARRVYGDIIS 171
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXX 215
+RR VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 172 TPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 231
Query: 216 XXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
GIPPGV NV+ A ++G+AL T P V KI+FTGSTA GK L+ AA +V
Sbjct: 232 AELANQAGIPPGVYNVIPCSQKKAKEVGEALCTDPLVSKISFTGSTATGKVLLHHAANSV 291
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K+VS+ELGG+AP IVFD A+++ AV GA+A+KFRNSGQTCVC+NR LVQ GI++ F F
Sbjct: 292 KRVSMELGGHAPFIVFDSANVDQAVAGAMASKFRNSGQTCVCSNRFLVQSGIHDSFVKKF 351
Query: 333 SKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
++A+K NL VG+GF E QGPLIN A+EKVE V DA+SKGA V+ GG+RH +G F+
Sbjct: 352 AEAIKTNLHVGNGFDERTTQGPLINAKAVEKVEKHVSDAISKGATVVTGGKRHHVGKNFF 411
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPT+LSNV +ML S+EE FGPVAP++ F TEEEA+ +AN N GLA Y ++ + + WR
Sbjct: 412 EPTLLSNVTRDMLCSQEETFGPVAPVIKFNTEEEAVAIANAANVGLAGYFYSQDPAQIWR 471
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
V+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 472 VAERLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCFGGL 526
|
|
| TIGR_CMR|SO_1275 SO_1275 "succinate-semialdehyde dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 274/475 (57%), Positives = 346/475 (72%)
Query: 30 PAFSRQGL-IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 88
P+ RQ I G+W DA +T+ + NPATG VIA V MG ET+ AI++A A +W
Sbjct: 6 PSLLRQQCYINGQWCDANSKETVAITNPATGAVIACVPVMGQAETQAAIAAAEAALPAWR 65
Query: 89 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 148
LTA ER LR+W++LL + ++L L+T EQGKPL EA GEV Y A FIE++AEEAKR
Sbjct: 66 ALTAKERGAKLRRWFELLNENSDDLALLMTSEQGKPLTEAKGEVTYAASFIEWFAEEAKR 125
Query: 149 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 208
+YG+ IP D+R+ V+KQPVGV AITPWNFP AMITRK PALA GCT+VVKP+ T
Sbjct: 126 IYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVKPAPQT 185
Query: 209 PXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268
P GIP GV +V+ G+A IG+ + T+P VRK++FTGST VG KLMA
Sbjct: 186 PFTALALAVLAERAGIPAGVFSVITGDAIAIGNEMCTNPIVRKLSFTGSTNVGIKLMAQC 245
Query: 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
A T+KK+SLELGGNAP IVFDDA+++ AV GA+ AK+RN+GQTCVCANR+ VQ G+Y++F
Sbjct: 246 APTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQAGVYDEF 305
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
A+ S AV LKVG+G GV GPLIN AA+EKV++ +EDA+ KGA VL GG+ H LG
Sbjct: 306 AEKLSMAVAKLKVGEGIIAGVTTGPLINAAAVEKVQSHLEDAIKKGATVLAGGKVHELGG 365
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448
F+EPTVL+N M V+REE FGP+APL F ++ I ANDT GLAAY + ++
Sbjct: 366 NFFEPTVLTNADKSMRVAREETFGPLAPLFKFNDVDDVIKQANDTEFGLAAYFYGRDISL 425
Query: 449 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
W+V+E+LEYG+VGVN GLISTEVAPFGG+K SGLGREGSKYG++E+LEIKY+C+
Sbjct: 426 VWKVAESLEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEIKYICM 480
|
|
| UNIPROTKB|Q88RC0 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas putida KT2440 (taxid:160488)] | Back alignment and assigned GO terms |
|---|
Score = 1402 (498.6 bits), Expect = 2.0e-143, P = 2.0e-143
Identities = 265/472 (56%), Positives = 350/472 (74%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
F +Q I G+W+DA +G+T++V NPATGEVI V MG ET+ AI +A A +W LT
Sbjct: 9 FRQQAYINGEWLDADNGQTIKVTNPATGEVIGTVPKMGTAETRRAIEAADKALPAWRALT 68
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ERS LR+W++L++ ++++L +L+T EQGKPL EA GE+ Y A FIE++AEEAKR+YG
Sbjct: 69 AKERSAKLRRWFELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFAEEAKRIYG 128
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXX 211
+ IP PD+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP
Sbjct: 129 DTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPYS 188
Query: 212 XXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
GIP GV++VV G+A ++G L + VRK++FTGST +G++LM A
Sbjct: 189 ALALVELAHRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQLMEECAKD 248
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+KKVSLELGGNAP IVFDDADL+ AV GA+ +K+RN+GQTCVCANR+ VQ+G+Y+ FA+
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDGVYDAFAEK 308
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ AV LK+G+G EG GPLI+ A+ KV+ +EDAVSKGAKVL GG+ + F+
Sbjct: 309 LAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIEDAVSKGAKVLSGGKL--IEGNFF 366
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPT+L +V V++EE FGP+APL FK E E I M+NDT GLA+Y + ++ R +R
Sbjct: 367 EPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARDMSRVFR 426
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
V+EALEYG+VG+N GLIS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+
Sbjct: 427 VAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCI 478
|
|
| UNIPROTKB|F1RUE3 ALDH5A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1386 (493.0 bits), Expect = 9.9e-142, P = 9.9e-142
Identities = 270/477 (56%), Positives = 350/477 (73%)
Query: 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
G +GG+W+ A T V++PA+G + V+ G E + A+ +A++AF +W ++A ER
Sbjct: 63 GFVGGRWLSA--ASTFPVYDPASGAELGLVADCGVSEARAAVRAAYEAFCTWKGVSAKER 120
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
S LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+ +EEA+RVYG++I
Sbjct: 121 SSFLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWCSEEARRVYGDVIY 180
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXX 215
+RR VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 181 TPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 216 XXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
GIPPGV NV+ A ++G+AL T P V KI+FTGSTA GK L+ AA +V
Sbjct: 241 AQLANQAGIPPGVYNVIPCSQKKAMEVGEALCTDPLVSKISFTGSTATGKVLLHHAANSV 300
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K+VS+ELGG+AP IVFD A+++ AV GA+ +KFRNSGQTCVC+NR LVQ GI++ F F
Sbjct: 301 KRVSMELGGHAPFIVFDSANVDQAVAGAMVSKFRNSGQTCVCSNRFLVQRGIHDSFVKKF 360
Query: 333 SKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
++A+K NL VG+GF E QGPLIN+ A+EKVE V DA+SKGA V+ GG+RH +G F+
Sbjct: 361 AEAIKTNLCVGNGFEERTTQGPLINEKAVEKVEKHVIDAISKGATVVTGGKRHQVGKNFF 420
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG--LAAYIFTNNLQRT 449
EPT+LSNV EML SREE FGP+AP++ F TEEEA+ +AN N G ++ Y ++ +L +
Sbjct: 421 EPTLLSNVTQEMLCSREETFGPLAPVIKFDTEEEAVAIANAANVGWQVSRYFYSQDLAQI 480
Query: 450 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 481 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCFGGL 537
|
|
| UNIPROTKB|E1BRI3 ALDH5A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 269/481 (55%), Positives = 353/481 (73%)
Query: 31 AFSRQG-LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK 89
A R+G L+GG+W++ V +PA+G+ + V+ G E + A+ +A +A +W +
Sbjct: 38 ALVRRGALVGGRWVET--PSAFPVRDPASGDELGRVADCGEAEARAAVRAAHEAGAAWGR 95
Query: 90 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 149
L A ERS +R+WY+L++ K++L +IT E GKPLKEA GEV Y A F+E++AEEA+RV
Sbjct: 96 LPAKERSALIRRWYELMIERKKDLATIITAENGKPLKEAEGEVLYSASFLEWFAEEARRV 155
Query: 150 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209
YG++IPA+ DRR+ VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 156 YGDVIPASAKDRRILVLKQPVGVAAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 215
Query: 210 XXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 266
GIP GV NVV A +G+ L T P V KI+FTGSTA GK L+
Sbjct: 216 LSALALGELANQAGIPAGVYNVVPCSRQQAAAVGEVLCTDPLVAKISFTGSTATGKILLK 275
Query: 267 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 326
AAGTVK+VS+ELGG+AP IVFD AD++ AV GALA+K+RNSGQTCVC NR LVQ+GI++
Sbjct: 276 HAAGTVKRVSMELGGHAPFIVFDSADVDRAVAGALASKYRNSGQTCVCTNRFLVQKGIHD 335
Query: 327 KFADAFSKAVKN-LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 385
F F+KA+++ L+VG GF QGPLIN+ A+EKVE + DAVS+GA V+ GG+RHS
Sbjct: 336 TFVQKFAKAIESELRVGSGFDAKTTQGPLINEKAVEKVERHINDAVSQGASVVTGGKRHS 395
Query: 386 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445
LG F+EPT+LSNV ++ML ++EE FGP+AP++ F TE EAI +AN + GLA Y ++ +
Sbjct: 396 LGKNFFEPTLLSNVTTKMLCTQEETFGPLAPVIKFDTEAEAIAIANAADVGLAGYFYSQD 455
Query: 446 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505
+ WRV+E LE G+VGVNEG++S+ +PFGG+KQSG+GREGSKYG+DE+LEIKYVC G
Sbjct: 456 PAQIWRVAEQLEVGMVGVNEGIVSSVESPFGGIKQSGIGREGSKYGIDEYLEIKYVCFGG 515
Query: 506 M 506
+
Sbjct: 516 L 516
|
|
| UNIPROTKB|Q3MSM3 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Hylobates lar (taxid:9580)] | Back alignment and assigned GO terms |
|---|
Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
Identities = 269/473 (56%), Positives = 349/473 (73%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW +++A ERS
Sbjct: 65 VGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKERSS 122
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 157
LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 123 LLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTP 182
Query: 158 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXX 217
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 183 AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAE 242
Query: 218 XXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+
Sbjct: 243 LASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKR 302
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VS+ELGG AP IVFD A+++ AV GALA+KFRN+GQTCVC+NR LVQ GI++ F AF++
Sbjct: 303 VSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAFAE 362
Query: 335 AVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 393
A+K NL VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH LG F+EP
Sbjct: 363 AMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEP 422
Query: 394 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 453
T+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+
Sbjct: 423 TLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVA 482
Query: 454 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 483 EQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
| UNIPROTKB|Q6A2H2 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Pongo pygmaeus (taxid:9600)] | Back alignment and assigned GO terms |
|---|
Score = 1379 (490.5 bits), Expect = 5.5e-141, P = 5.5e-141
Identities = 267/473 (56%), Positives = 349/473 (73%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW +++A ERS
Sbjct: 65 VGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKERSS 122
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 157
LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II
Sbjct: 123 LLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTP 182
Query: 158 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXX 217
DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 183 AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAE 242
Query: 218 XXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ AA +VK+
Sbjct: 243 LASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKR 302
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F AF++
Sbjct: 303 VSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAE 362
Query: 335 AVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 393
A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH LG F+EP
Sbjct: 363 AMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEP 422
Query: 394 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 453
T+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ + + WRV+
Sbjct: 423 TLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQIWRVA 482
Query: 454 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 483 EQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8BWF0 | SSDH_MOUSE | 1, ., 2, ., 1, ., 2, 4 | 0.5759 | 0.9194 | 0.8948 | yes | no |
| P51649 | SSDH_HUMAN | 1, ., 2, ., 1, ., 2, 4 | 0.5822 | 0.9194 | 0.8747 | yes | no |
| P25526 | GABD_ECOLI | 1, ., 2, ., 1, ., 7, 9 | 0.5750 | 0.9292 | 0.9813 | N/A | no |
| Q9US47 | SSDH1_SCHPO | 1, ., 2, ., 1, ., 1, 6 | 0.5157 | 0.9332 | 0.8683 | yes | no |
| Q9SAK4 | SSDH_ARATH | 1, ., 2, ., 1, ., 2, 4 | 0.7628 | 0.9980 | 0.9621 | yes | no |
| Q6A2H2 | SSDH_PONPY | 1, ., 2, ., 1, ., 2, 4 | 0.5822 | 0.9194 | 0.8747 | N/A | no |
| P94428 | GABD_BACSU | 1, ., 2, ., 1, ., 7, 9 | 0.5426 | 0.8919 | 0.9826 | yes | no |
| Q6A2H0 | SSDH_PANTR | 1, ., 2, ., 1, ., 2, 4 | 0.5822 | 0.9194 | 0.8747 | yes | no |
| Q6A2H1 | SSDH_GORGO | 1, ., 2, ., 1, ., 2, 4 | 0.5822 | 0.9194 | 0.8747 | N/A | no |
| Q3MSM4 | SSDH_PANPA | 1, ., 2, ., 1, ., 2, 4 | 0.5822 | 0.9194 | 0.8747 | N/A | no |
| P51650 | SSDH_RAT | 1, ., 2, ., 1, ., 2, 4 | 0.5801 | 0.9194 | 0.8948 | yes | no |
| Q3MSM3 | SSDH_HYLLA | 1, ., 2, ., 1, ., 2, 4 | 0.5864 | 0.9194 | 0.8747 | N/A | no |
| P38067 | UGA2_YEAST | 1, ., 2, ., 1, ., 1, 6 | 0.4979 | 0.9312 | 0.9537 | yes | no |
| B9F3B6 | SSDH_ORYSJ | 1, ., 2, ., 1, ., 2, 4 | 0.7991 | 0.9292 | 0.8975 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 509 | |||
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 0.0 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 0.0 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 0.0 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-180 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-179 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-178 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-169 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-168 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-166 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-165 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-162 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-160 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-158 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-155 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-153 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-153 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-153 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-153 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-150 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-150 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-149 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-149 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-149 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-148 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-146 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-146 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-146 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-146 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-144 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-144 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-144 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-144 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-141 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-141 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-141 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-140 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-140 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-139 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-139 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-138 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-137 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-135 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-134 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-133 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-133 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-131 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-131 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-127 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-127 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-127 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-126 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-124 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-123 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-121 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-121 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-120 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-118 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-117 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-113 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-112 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-111 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-109 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 1e-106 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-106 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-103 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-103 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-102 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 1e-98 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-96 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-92 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-92 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 2e-85 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 4e-85 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 7e-83 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 9e-80 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-78 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 7e-78 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 1e-76 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 5e-74 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 5e-74 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-72 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 7e-72 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-70 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 8e-70 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 8e-69 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 2e-68 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 3e-67 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 6e-67 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 6e-63 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 1e-57 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 4e-55 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 7e-54 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 8e-54 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-53 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-45 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-42 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-42 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 8e-42 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-40 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 7e-32 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 5e-29 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 5e-27 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 3e-26 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 5e-23 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 5e-22 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 5e-10 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 2e-09 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 7e-09 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 7e-09 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-08 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 2e-07 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 4e-07 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 1e-06 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 9e-05 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 7e-04 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 928 bits (2400), Expect = 0.0
Identities = 393/476 (82%), Positives = 434/476 (91%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
QGLIGGKW DAYDGKT V+NPATGEVIANV CMG ET DAI+SA DAF SWSKLT
Sbjct: 23 LRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLT 82
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A+ERSK LR+WYDL++A+KE+L QL+TLEQGKPLKEA+GEV YGA F+E++AEEAKRVYG
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYG 142
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+IIP+ PDRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLT
Sbjct: 143 DIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLT 202
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
ALAAAELALQAGIPPGV+NVVMG+AP+IGDALL SP+VRKITFTGSTAVGKKLMAGAA T
Sbjct: 203 ALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAAT 262
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
VK+VSLELGGNAP IVFDDADL+VAV GALA+KFRNSGQTCVCANR+LVQEGIY+KFA+A
Sbjct: 263 VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEA 322
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
FSKAV+ L VGDGF EGV QGPLIN+AA++KVE+ V+DAVSKGAKVLLGG+RHSLG TFY
Sbjct: 323 FSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFY 382
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPTVL +V +ML+ REEVFGPVAPL FKTEEEAI +ANDT AGLAAYIFT +LQR WR
Sbjct: 383 EPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWR 442
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
VSEALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGSKYG+DE+LEIKYVCLG+MN
Sbjct: 443 VSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGNMN 498
|
Length = 498 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 810 bits (2096), Expect = 0.0
Identities = 288/451 (63%), Positives = 350/451 (77%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V NPATGEVI V G + AI +A AF +W K TA ER+ LR+W DL+ E+
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 172
L +L+TLEQGKPL EA GEVDY A F+E++AEEA+R+YG IP+ P +R+ V+KQPVGV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 173 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 232
AITPWNFP AMITRK+ PALA GCTVV+KP+E TPL+ALA AELA +AG+P GV+NVV
Sbjct: 121 VAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVV 180
Query: 233 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292
G+ +IG+AL SP+VRKI+FTGSTAVGK LMA AA TVK+VSLELGGNAP IVFDDAD
Sbjct: 181 TGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240
Query: 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352
L+ AV+GA+A+KFRN+GQTCVCANR+ V E IY++F + + VK LKVG+G EG G
Sbjct: 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMG 300
Query: 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 412
PLIN+ A+EKVE VEDAV+KGAKVL GG+R LG FYEPTVL++V +ML+ EE FG
Sbjct: 301 PLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFG 360
Query: 413 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 472
PVAP++ F TE+E I ANDT GLAAY+FT +L R WRV+EALE G+VG+N GLIS
Sbjct: 361 PVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAE 420
Query: 473 APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
APFGGVK+SGLGREG K G++E+LE KYV L
Sbjct: 421 APFGGVKESGLGREGGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 686 bits (1771), Expect = 0.0
Identities = 296/448 (66%), Positives = 360/448 (80%), Gaps = 1/448 (0%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V+NPATGE+I +V G ET+ AI +A++AF +W TA ERS LRKWY+L+M +K++
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 172
L +LITLE GKPLKEA GE+ Y A F+E++AEEAKRVYG+ IP+ D+RL V+KQPVGV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 173 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 232
AITPWNFP AMITRK G ALA GCTVVVKP+E TPL+ALA A LA QAGIP GV+NV+
Sbjct: 121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVI 180
Query: 233 MGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
G+ A ++G+ L TSP VRKI+FTGST VGK LM +A TVKKVS+ELGGNAP IVFDDA
Sbjct: 181 TGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ AV GA+A+KFRN+GQTCVCANR+ V +GIY++FA ++AVK LKVG+G EGV Q
Sbjct: 241 DLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQ 300
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 411
GPLIN+ A+EKVE + DAV KGAKV+ GG+RH LG F+EPTVLSNV ++MLVS+EE F
Sbjct: 301 GPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETF 360
Query: 412 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 471
GP+AP+ F EEE I +ANDT GLAAY F+ +L R WRV+EALEYG+VG+N GLIS
Sbjct: 361 GPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNV 420
Query: 472 VAPFGGVKQSGLGREGSKYGMDEFLEIK 499
VAPFGGVKQSGLGREGSKYG++E+LE K
Sbjct: 421 VAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 636 bits (1641), Expect = 0.0
Identities = 273/473 (57%), Positives = 362/473 (76%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
F +Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A +W LT
Sbjct: 9 FRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALT 68
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LR+W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AEE KR+YG
Sbjct: 69 AKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG 128
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP +
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
ALA AELA++AGIP GV NVV G+A +G L ++P VRK++FTGST +G++LM A
Sbjct: 189 ALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 248
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+Y++FA+
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+AV L +GDG +GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H LG F+
Sbjct: 309 LQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFF 368
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PT+L +V + V++EE FGP+APL FK E + I ANDT GLAAY + +L R +R
Sbjct: 369 QPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 428
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
V EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 429 VGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
|
Length = 482 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 612 bits (1581), Expect = 0.0
Identities = 225/461 (48%), Positives = 308/461 (66%), Gaps = 3/461 (0%)
Query: 42 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 101
W+D+ +T+EV NPATGEVIA V ++ A+++A AF +W+K +ER+ L K
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 102 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDR 161
DLL ++EL +L TLE GKPL EA GEV + +YA A+++ GE +P+ P
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPSD-PGV 118
Query: 162 RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ 221
+ ++P+GV GAITPWNFPL + K+ PALA G TVV+KPSE TPLTAL AEL +
Sbjct: 119 LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEE 178
Query: 222 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 281
AG+PPGV+NVV G+ ++GDAL+ P V K++FTGST VG+++ AA +K+V+LELGG
Sbjct: 179 AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGG 238
Query: 282 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 341
P IVFDDADL+ AV GA+ F N+GQ C +R+LV E IY++F + +A K+LKV
Sbjct: 239 KNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKV 298
Query: 342 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKS 401
GD GPLI+K E+V +++EDA +GAK+L GG F EPTVL++V
Sbjct: 299 GDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTP 358
Query: 402 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 461
+M +++EE+FGPV ++ FK E+EAI +ANDT GLAA +FTN+L+R RV+ LE G+V
Sbjct: 359 DMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMV 418
Query: 462 GVNEGLISTEVA-PFGGVKQSGLGREGSKYGMDEFLEIKYV 501
+N+ A PFGG KQSG GREG K G++E+ E K V
Sbjct: 419 WINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 595 bits (1537), Expect = 0.0
Identities = 243/469 (51%), Positives = 325/469 (69%), Gaps = 7/469 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
LI G+W+D T+EV NPATGEVIA V ++ A+++A AF +WS+L+A ER+
Sbjct: 4 LIDGEWVDG--ASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERA 61
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LR+ DLL A EEL LITLE GKP+ EA GE+ A FI +YAEEA+R+ GE IP
Sbjct: 62 AILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPT 121
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
+ V ++P+GV GAITPWNFPLA+ K+ PALA G TVV+KPSE TPL+ALA A
Sbjct: 122 D-KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALA 180
Query: 217 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276
ELA +AG+P GV+NVV G ++GDAL+ P V I+FTGSTAVG+ + A AA +K V+
Sbjct: 181 ELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVT 240
Query: 277 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 336
LELGG +P IV +DADL+ AV+ A+ F N+GQ C A+R++V E +Y++F +
Sbjct: 241 LELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARA 300
Query: 337 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 396
+LKVGD GPLI++ L++VE ++EDAV++GA++L GG+R G F EPT+L
Sbjct: 301 ASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVEPTIL 358
Query: 397 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 456
V +M ++REE+FGPV P++ FK EEEAI +ANDT GLAA IFT +L R +RV+ L
Sbjct: 359 EGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRL 418
Query: 457 EYGLVGVNEGLISTEV--APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
E G+VG+N+ ++ PFGGVKQSGLGREG KYG++EF E+K V +
Sbjct: 419 EAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTI 467
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 566 bits (1460), Expect = 0.0
Identities = 223/430 (51%), Positives = 300/430 (69%), Gaps = 2/430 (0%)
Query: 76 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 135
A+++A AF +W+ L AER+ LRK DLL +EEL L TLE GKP++EA+GEV
Sbjct: 3 AVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARA 62
Query: 136 AKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195
A +YA A+R++GE+IP+ P V ++P+GV GAITPWNFPL + K+ PALA
Sbjct: 63 ADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALA 122
Query: 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 255
G TVV+KPSE TPLTAL AEL +AG+PPGV+NVV G+ ++G AL + P+V KI+FT
Sbjct: 123 AGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFT 182
Query: 256 GSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 315
GSTAVGK +M AA +K+V+LELGG +P IVFDDADL+ AV GA+ F N+GQ C A
Sbjct: 183 GSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAA 242
Query: 316 NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 375
+R+LV E IY++F + + VK LKVG+ GPLI+ A L++V ++EDA ++GA
Sbjct: 243 SRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302
Query: 376 KVLLGGRR-HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 434
K+L GG+R F PTVL++V +M +++EE+FGPV P++ FK EEEAI +ANDT
Sbjct: 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTE 362
Query: 435 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMD 493
GLAA +FT +L+R RV+E LE G V +N+ + E APFGGVKQSG+GREG YG++
Sbjct: 363 YGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLE 422
Query: 494 EFLEIKYVCL 503
E+ E K V +
Sbjct: 423 EYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 544 bits (1405), Expect = 0.0
Identities = 213/467 (45%), Positives = 299/467 (64%), Gaps = 5/467 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
I G+++ + G+T++V NPATGEV+A V ++ A+ +A A +W +L A ER+
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAA 61
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 157
LRK DL+ + +EL +LI EQGK L A EV++ A +I++ AE A+R+ GEIIP+
Sbjct: 62 YLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSD 121
Query: 158 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 217
P+ +F+ K P+GV I PWNFP +I RK+ PAL G T+V+KPSE TPL AL AE
Sbjct: 122 RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAE 181
Query: 218 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSL 277
L +AG+P GV+N+V G +GDAL+ P+V I+ TGST G+K+M AA + KVSL
Sbjct: 182 LVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSL 241
Query: 278 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK 337
ELGG AP IV DADL++AV + ++ N GQ C CA RV V E IY++F + + +K
Sbjct: 242 ELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMK 301
Query: 338 NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVL 396
+KVGD F GPL+N+AAL+KVE VE AV GA +L GG+R FYEPTVL
Sbjct: 302 AVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVL 361
Query: 397 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 456
+NV+ +M + +EE+FGPV P++ F + +EAI +AND+ GL +YI+T NL R + L
Sbjct: 362 TNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNEL 421
Query: 457 EYGLVGVNEGLISTEVAP--FGGVKQSGLGREGSKYGMDEFLEIKYV 501
E+G +N + E G K+SGLG K+G++E+L+ K V
Sbjct: 422 EFGETYINRE--NFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 514 bits (1327), Expect = e-180
Identities = 207/469 (44%), Positives = 288/469 (61%), Gaps = 5/469 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLTAAE 94
I +++D+ GKT NPAT EVI V+ ++ A+ +A AF + K+ E
Sbjct: 7 FINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRE 66
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEI 153
R + L K DL+ ++EL L +L+ GKPL+E A G+V K + +YA A ++ G+
Sbjct: 67 RGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT 126
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
IP + + ++P+GV G I PWNFPL M+ K+ PALA G TVV+KP+E TPL+AL
Sbjct: 127 IP-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSAL 185
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM-AGAAGTV 272
AEL +AG PPGVVN+V G P G A+ + V KI FTGSTAVG+ +M A A +
Sbjct: 186 YLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNL 245
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
KKV+LELGG +P IVFDDADL+ AV A F N GQ C +R+ VQE IY++F + F
Sbjct: 246 KKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKF 305
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+ VGD F QGP ++KA +K+ +++E +GA +L GG RH F +
Sbjct: 306 KARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQ 365
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PTV ++VK +M +++EE+FGPV +L FKTE+E I ANDT GLAA +FT ++ + RV
Sbjct: 366 PTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRV 425
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
S AL+ G V VN + PFGG KQSG GRE + G++E+ ++K V
Sbjct: 426 SRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 511 bits (1318), Expect = e-179
Identities = 217/456 (47%), Positives = 293/456 (64%), Gaps = 6/456 (1%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
NPATGEV+A V G E A+++A +AF WS+++ AER++ L K DL+ A +E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 113 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 171
L L +L+ GKP+ A ++ A F+A+ ++ GE P +VL+QPVG
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVG 119
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
VAG ITPWN PL ++T K+ PALA G TVV+KPSE+TPLTA AELA +AG+PPGVVNV
Sbjct: 120 VAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNV 179
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
V G P+ G AL+ P V I+FTG TA G+ +M AA +K VSLELGG P IVF DA
Sbjct: 180 VHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ AV+ A+ + F N+G+ C+ +R+LVQ IY++F + F + K LKVGD
Sbjct: 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEV 299
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSR 407
GPLI+K LEKV +VE A ++GA +L GG R L F EPTV++ + ++ V++
Sbjct: 300 GPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQ 359
Query: 408 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 467
EE+FGPV ++ F EEEAI +ANDT GLAAY++T +L R RV+ LE G V VN L
Sbjct: 360 EEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWL 419
Query: 468 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
+ PFGGVK SG+GREG Y ++ + E+K VC+
Sbjct: 420 VRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 507 bits (1308), Expect = e-178
Identities = 205/455 (45%), Positives = 280/455 (61%), Gaps = 6/455 (1%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHK 110
NPATGE A V + A+++A AF W KLT ER K LR+ DL+ A+
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 170
EEL +L T + GK ++E +V Y A++ +YA A ++ G +IP D F ++P+
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 171 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230
GV AITPWN PL ++ +K+ PALA G TVV+KPSE TP + L A+LA +AG PPGVVN
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVN 180
Query: 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290
VV G P+ G+AL+ P V KI FTG T G+ + AA + V+LELGG +P IVFDD
Sbjct: 181 VVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240
Query: 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350
ADL+ AVNG +A F +GQTCV +R+LVQ IY++F + + ++VGD
Sbjct: 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQ 300
Query: 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVS 406
GPL + LEKVE +V A +GA+VL GG R S F+EPT+L++V ++M ++
Sbjct: 301 MGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIA 360
Query: 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 466
+EEVFGPV ++ F EEEAI +AND+ GLAA I+T +L R RV+ A+E G V VN
Sbjct: 361 QEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTY 420
Query: 467 LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
+ +PFGG K SG+GRE + E+ + K V
Sbjct: 421 RALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 483 bits (1247), Expect = e-169
Identities = 190/447 (42%), Positives = 254/447 (56%), Gaps = 5/447 (1%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V NPATGEV A+ + A+++A AF WS ER L D + A+ EE
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 172
L +L+TLEQGKPL EA EV ++ + A E+I RR+ + ++P+GV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDLPD--EVIEDD-DTRRVELRRKPLGV 117
Query: 173 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 232
AI PWNFPL + K+ PAL G TVV+KPS FTPL L ELA + +PPGV+NVV
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 233 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292
G ++G AL + P +RKI+FTGSTA GKK+MA AA T+K+V+LELGGN IV D D
Sbjct: 177 SGGD-ELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD 235
Query: 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352
++ F NSGQ C R+ V E IY++F +A K VGDG G G
Sbjct: 236 IDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLG 295
Query: 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 412
P+ NK +KV+ VEDA +KGAKVL GG F PT++ + + EE FG
Sbjct: 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFG 355
Query: 413 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 472
PV P+L + E+E I AND+ GL A +++++L+R V+ LE G V +N
Sbjct: 356 PVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPD 415
Query: 473 APFGGVKQSGLGREGSKYGMDEFLEIK 499
APFGG KQSG+G E G+ E+ + +
Sbjct: 416 APFGGHKQSGIGVEFGIEGLKEYTQTQ 442
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 483 bits (1246), Expect = e-168
Identities = 210/458 (45%), Positives = 292/458 (63%), Gaps = 7/458 (1%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 110
+EV NPA GEVI V + +E ++AI A A + S L A +R K L K +L+ K
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 166
EEL +L+T+E GKP+K++ EV+ + + AEEAK + GE IP R F +
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 167 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 226
++P+GV GAITP+NFP + K+ PA+A G +VVVKPS TPLTA+ A++ +AG+PP
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPP 180
Query: 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286
GV+NVV G ++GD ++T+P+V I+FTGSTAVG + + A GT KKV+LELGG+ P I
Sbjct: 181 GVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240
Query: 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346
V DADL AV+ A+ +F N+GQ C R+LV+E +Y+KF + VK LKVGD
Sbjct: 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLD 300
Query: 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 406
E GPLI+ A+E++E V DAV KG K+L GG+R +F+ PTVL N +M+V
Sbjct: 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKR--DEGSFFPPTVLENDTPDMIVM 358
Query: 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE- 465
+EEVFGPV P+ K +EEA+ +AN T GL A +FTN++ R +V+ LE G V +N+
Sbjct: 359 KEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDS 418
Query: 466 GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
+ PFGG K+SG+GREG +Y M E E K + +
Sbjct: 419 TRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 479 bits (1235), Expect = e-166
Identities = 201/470 (42%), Positives = 284/470 (60%), Gaps = 7/470 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAER 95
I G+W++A GKT ++ NPA GEVIA V ++ K AI++A AF+S W L A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
+ L + D + EEL +L TL GK L+E+ ++D A +YA A + GE+
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD 121
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
P +++PVGV G ITPWN+PL K+ PALA G TVV+KPSE TPLT +A
Sbjct: 122 VP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
EL +AG+P GVVN+V G+ +G L SP V ++FTG TA G+ +M AAG VKKV
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKV 240
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
+LELGG P IVF DAD AV+ AL F N+GQ C +R+LV+E I++KF A ++
Sbjct: 241 ALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAER 300
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 391
K +K+G+G GPL++ EKV ++++ +GA+++ GG+R + F
Sbjct: 301 AKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFV 360
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPT+ +V M + +EE+FGPV + F TEEEAI +ANDT GLA ++T ++ R R
Sbjct: 361 EPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANR 420
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
V+ L G V +N+ AP+GG KQSG+GRE G++E+ E K++
Sbjct: 421 VARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 475 bits (1224), Expect = e-165
Identities = 210/460 (45%), Positives = 287/460 (62%), Gaps = 14/460 (3%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 110
+EV +P GEVI V ++ + AI++A + L A ER++ L + LL +
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 166
EE + I LE GKP+K+A EVD + + AEEAKR+ GE IP R F +
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 167 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 226
++P+GV AITP+NFPL ++ KVGPA+A G VV+KP+ TPL+AL AEL L+AG+P
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286
G +NVV G+ +GDAL+T P+VR I+FTGS AVG+ + A AG +KKV+LELG NA I
Sbjct: 181 GALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAI-ARKAG-LKKVTLELGSNAAVI 238
Query: 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346
V DADL AV ++ F N+GQ C+ R+ V E IY++F + F A K L VGD
Sbjct: 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLD 298
Query: 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 406
E GP+I++A E++E +VE+AV GA++L GG+R EPTVL++V +M V
Sbjct: 299 EDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDG---AILEPTVLTDVPPDMKVV 355
Query: 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 466
EEVF PV L F T +EAI MAND+ GL A +FTN+LQ+ + + LE G V +N+
Sbjct: 356 CEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMIND- 414
Query: 467 LIST---EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
ST + P+GGVK+SG GREG +Y ++E EIK VC
Sbjct: 415 -SSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 467 bits (1205), Expect = e-162
Identities = 188/467 (40%), Positives = 275/467 (58%), Gaps = 12/467 (2%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
I G W+ +T++V NPAT EVI V + A+++A AF +WS + ER+
Sbjct: 3 IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAA 62
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRV-YGEIIP 155
L + + A +EL Q ITLE G P+ A +V G + A+ K + E
Sbjct: 63 LLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERRG 122
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+L V+++P+GV G ITPWN+PL I KV PALA GCTVV+KPSE PL+A+
Sbjct: 123 NSL------VVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIIL 176
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
AE+ +AG+P GV N+V G+ P +G+AL P V ++FTGST GK++ AA TVK+V
Sbjct: 177 AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRV 236
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
+LELGG + I+ DDADL AV +AA F NSGQ+C R+LV Y + + + A
Sbjct: 237 ALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAA 296
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYE 392
+ VGD GPL + A ++V+ +++ + +GA+++ GG G+ F +
Sbjct: 297 AEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVK 356
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PTV ++V +M ++REE+FGPV ++ + E+EAI +ANDT GLA Y+++ + +R V
Sbjct: 357 PTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAV 416
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
+ L G V +N + APFGG KQSG GRE +YG++EFLE+K
Sbjct: 417 ARRLRAGQVHINGAAFNPG-APFGGYKQSGNGREWGRYGLEEFLEVK 462
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 462 bits (1191), Expect = e-160
Identities = 194/452 (42%), Positives = 285/452 (63%), Gaps = 4/452 (0%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 110
+ NPA G V A V+ ++ + AI++A+DAF +W+ T +ER + L K +++
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRA 60
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 170
++L L+ E G +A E + + + A E +RV GE +P+ P +++P+
Sbjct: 61 DDLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPL 120
Query: 171 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230
GV ITP+N+PL + T+KV ALA G TVV+KPSE TP+ L AE+ +AG+P GV N
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFN 180
Query: 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290
VV G ++GD L+ P+VR +TFTGSTAVG+++ A +KK++LELGG P IV D
Sbjct: 181 VVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240
Query: 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350
ADL+ AV A F + GQ C+ A+R++V+E +Y++F F LKVGD V
Sbjct: 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTV 300
Query: 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 410
GPLI+ +E+++ VEDAV+KGAK+L GG+ FY+PTVL++V +M + REE
Sbjct: 301 IGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREET 357
Query: 411 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 470
FGPV ++ K EEA+ +ANDT GL+A I TN+LQR ++++E LE G+V +N+ I
Sbjct: 358 FGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILD 417
Query: 471 E-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
E PFGGVK SG GREG ++ M+EF E+K++
Sbjct: 418 EAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 457 bits (1179), Expect = e-158
Identities = 186/430 (43%), Positives = 265/430 (61%), Gaps = 5/430 (1%)
Query: 74 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 133
A ++A A +W+ ER+ LRK ++L ++E+ + E G +A EV
Sbjct: 3 DRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVG 62
Query: 134 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193
+ A +R GEI+P+ +P + V + P+GV G I+P+NFPL + R V PA
Sbjct: 63 AAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPA 122
Query: 194 LACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 252
LA G VV+KP TP+T L AE+ +AG+P GV+NVV G +IGDAL+ P+VR I
Sbjct: 123 LALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMI 182
Query: 253 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 312
+FTGSTAVG+ + A +KKV+LELGGN P IV DDADL++AV+ A F + GQ C
Sbjct: 183 SFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQIC 242
Query: 313 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372
+ A R+LV E +Y++F + K L VGD V GPLIN+ +++V VEDAV+
Sbjct: 243 MAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVA 302
Query: 373 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432
GA++L GG L FY+PTVLS+V +M + REE+FGPVAP++ F +EEA+ +AND
Sbjct: 303 AGARLLTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELAND 359
Query: 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYG 491
T GL+A +FT +L+R +E LE G+V +N+ ++ E PFGGVK SG GR G
Sbjct: 360 TEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPAS 419
Query: 492 MDEFLEIKYV 501
++EF E +++
Sbjct: 420 LEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 450 bits (1161), Expect = e-155
Identities = 198/462 (42%), Positives = 284/462 (61%), Gaps = 14/462 (3%)
Query: 48 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDL 105
G+T NPATG V+A V+ + A+++A AF S WS+L+ AER L + DL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 106 LMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF 164
+ AH++EL L TL+ GKP+ +A+ +V A +YAE +VYGE+ P T PD
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAP-TGPDALAL 119
Query: 165 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 224
+ ++P+GV GA+ PWNFPL M K+ PALA G +VV+KP+E +PLTAL AELAL+AG+
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 225 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNA 283
P GV+NVV G G+AL V + FTGST VG++ + + + +K+V LE GG +
Sbjct: 180 PAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKS 239
Query: 284 PCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 342
P IVF DA DL+ A A A F N G+ C +R+LV E I ++F + A + K G
Sbjct: 240 PNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPG 299
Query: 343 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVK 400
D G L+++A +KV ++E ++GA+++ GG+R G F EPTV V
Sbjct: 300 DPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVT 359
Query: 401 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 460
+M ++REE+FGPV ++ F +EEEA+ +AND+ GLAA ++T++L R RV+ L G
Sbjct: 360 PDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGT 419
Query: 461 VGVN---EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
V VN EG I+T PFGG KQSG GR+ S + +D++ E+K
Sbjct: 420 VWVNCFDEGDITT---PFGGFKQSGNGRDKSLHALDKYTELK 458
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 446 bits (1149), Expect = e-153
Identities = 202/470 (42%), Positives = 291/470 (61%), Gaps = 7/470 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERS 96
I +++ + DG+T++ NP+TGEVIA+V G ++ A+ +A AF + WSK+T ER
Sbjct: 12 INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERG 71
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
+ L K DL+ +++ L + L+ GKP A+G++D I +YA A ++ G+ IP
Sbjct: 72 ELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIP 131
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ P++ + L +P GV G I PWN+PLAM K+ PALA G TVV+KP+E TPL+ L
Sbjct: 132 TS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
A L +AG PPGVVN++ G G AL P V KI FTGSTA G+ +M AA +K V
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAV 250
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
+LE GG +P +VF+DADL+ AV A A NSGQ C +R+ VQE IY+KF + F +
Sbjct: 251 TLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEH 310
Query: 336 VK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FY 391
VK N KVG F + V GP ++K ++V +++E +GAK++ GG + G+ F
Sbjct: 311 VKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFI 370
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
PT+ ++V +M + +EE+FGPV + FKT EEAI ANDT GLAA +FT +++R R
Sbjct: 371 PPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHR 430
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
V+ LE G+V +N S PFGG K SG+GRE +YG++ + + K V
Sbjct: 431 VARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 445 bits (1147), Expect = e-153
Identities = 189/469 (40%), Positives = 275/469 (58%), Gaps = 4/469 (0%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
+ LI G+ + +G+ V+NPATGEV+A ++ + A+++A AF WS+ T E
Sbjct: 4 KLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKE 62
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEI 153
R++ L K D + + +E +L +L GKPL A+ E+ F+A A+ + G+
Sbjct: 63 RAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKA 122
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
L + + PVGV +I PWN+PL M K+ PALA G TVV+KPSE TPLTAL
Sbjct: 123 AGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTAL 182
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
AELA +PPGV+NVV G +GDAL+ P+VR ++ TGS A GK +++ AA +VK
Sbjct: 183 KLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVK 241
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+ LELGG AP IVFDDADL+ V G + N+GQ C A R+ Q GIY+ +
Sbjct: 242 RTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLA 301
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYE 392
AV LKVGD E GPLI+ A ++V FVE A + G +V+ GG +YE
Sbjct: 302 AAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYE 361
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L+ + + + + EVFGPV + F E++A+ AND++ GLA+ ++T ++ R RV
Sbjct: 362 PTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRV 421
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
S L+YG VN + P GG KQSG G++ S YG++++ +++V
Sbjct: 422 SARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 445 bits (1146), Expect = e-153
Identities = 190/471 (40%), Positives = 285/471 (60%), Gaps = 7/471 (1%)
Query: 36 GLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
I G+W+ DG+ E NP+ T +V+ + ++ AI++A AF +W + +
Sbjct: 3 NYIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEA 60
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
R+ L K D L A KEEL +L+T E+GK L EA GEV + +YA EA R+ GE +
Sbjct: 61 RADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETL 120
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P+T P + ++P+GV G ITPWNFP+A+ K+ PALA G TVV KP+E TP +A A
Sbjct: 121 PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWA 180
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
E+ +AG+P GV N+VMG+ ++G AL+ P V ++FTGSTAVG+++ A AA +
Sbjct: 181 LVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGAR 240
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
V LE+GG P +V DDADL++AV A+ F ++GQ C ++R++V EGI+++F +A +
Sbjct: 241 VQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVE 300
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--FYE 392
K LKVGD EGV GP++++ LEK ++E A S+GAK++ GG R +
Sbjct: 301 RTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLA 360
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
P + + V ++M ++REE+FGPVA ++ + +EA+ +ANDT GL+A I T +L+
Sbjct: 361 PALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHF 420
Query: 453 SEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-REGSKYGMDEFLEIKYV 501
+E G+V VN + PFGG K S G RE + ++ + IK V
Sbjct: 421 KRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 444 bits (1144), Expect = e-153
Identities = 203/455 (44%), Positives = 282/455 (61%), Gaps = 7/455 (1%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V NPAT I + ++ A+ +A AF W K T AER+K LR + + +EE
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV---YGEIIPATLPDRRLFVLKQP 169
L +L + GKPL EA +VD A E+YA+ A+++ +P D + V ++P
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREP 120
Query: 170 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVV 229
VGV G ITPWNFPL M KV PALA GCTVV+KPSE T LT L AE+A +AG+PPGV+
Sbjct: 121 VGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVL 180
Query: 230 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289
NVV G + G L P + KI+FTGSTA G ++M AA +K VSLELGG +P IVFD
Sbjct: 181 NVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240
Query: 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349
DADL AV A+ F N+GQ C +R+LV E I + F + + A + ++VGD EGV
Sbjct: 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGV 300
Query: 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--FYEPTVLSNVKSEMLVSR 407
GPL+++A EKV +F+ +GA++L GGRR + F PTV ++V ++ + R
Sbjct: 301 RLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWR 360
Query: 408 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EG 466
EE+FGPV + F TE+EAI +AND+ GLAA + + + +R RV+EALE G+V +N
Sbjct: 361 EEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQ 420
Query: 467 LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
+ AP+GG K+SG+GRE ++G+D +LE+K +
Sbjct: 421 PCFPQ-APWGGYKRSGIGRELGEWGLDNYLEVKQI 454
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 437 bits (1125), Expect = e-150
Identities = 202/451 (44%), Positives = 285/451 (63%), Gaps = 4/451 (0%)
Query: 55 NPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113
NPATGE+IA V+ E D A+++A AF +WS + AER + L + +L++A+ +EL
Sbjct: 3 NPATGELIARVA-QASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADEL 61
Query: 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 172
+L +L+ GKP++ A +V A +YA A ++ GE+IP + +++PVGV
Sbjct: 62 ARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGV 120
Query: 173 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 232
GAI PWNFPL KV PALA G TVV+KP+E TPL+AL AEL +AG P GV+NVV
Sbjct: 121 VGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVV 180
Query: 233 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292
G G AL+ P V KITFTGSTAVG+K+M GAAG +K+VSLELGG + IVF DAD
Sbjct: 181 TGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240
Query: 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352
L+ AV A F N GQ C +R+LV E IY++F + F+ ++L+ GD G
Sbjct: 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMG 300
Query: 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 412
PL+++A ++V +V+ +GA++L GG+R F EPT+ + V EM +++EE+FG
Sbjct: 301 PLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFG 360
Query: 413 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 472
PV ++ F+ EEEA+ +AN T GLAA ++T +L R RV+ AL+ G V +N
Sbjct: 361 PVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPG 420
Query: 473 APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
+PFGG KQSG GRE + +DE+ E+K V +
Sbjct: 421 SPFGGYKQSGFGREMGREALDEYTEVKSVWV 451
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 437 bits (1125), Expect = e-150
Identities = 207/482 (42%), Positives = 275/482 (57%), Gaps = 17/482 (3%)
Query: 28 YTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAF-- 84
YT F I +W D+ GKT NPATGE I V G K D A+ +A AF
Sbjct: 6 YTKIF-----INNEWHDSVSGKTFPTINPATGEKICEVQE-GDKADVDKAVKAARAAFKL 59
Query: 85 -NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFY 142
+ W + A+ER + L K DL+ + L L TL+ GKP K + ++ K + +Y
Sbjct: 60 GSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYY 119
Query: 143 AEEAKRVYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 200
A A +++G+ IP D F +PVGV G I PWNFPL M K+ PALACG TV
Sbjct: 120 AGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTV 176
Query: 201 VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 260
V+KP+E TPLTAL A L +AG PPGVVNVV G P G A+ + P + K+ FTGST V
Sbjct: 177 VLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEV 236
Query: 261 GKKLM-AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 319
GK + A +K+V+LELGG +P IVF DADL+ AV A A F N GQ C +R
Sbjct: 237 GKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTF 296
Query: 320 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 379
VQE IY++F + K VG+ F QGP I++ +K+ +E +GAK+
Sbjct: 297 VQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLEC 356
Query: 380 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 439
GG+RH F +PTV S+V +M +++EE+FGPV + FKT +E I AN+T GLAA
Sbjct: 357 GGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAA 416
Query: 440 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
+FT ++ + S AL G V VN + + APFGG K SG GRE +YG+ E+ E+K
Sbjct: 417 AVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVK 476
Query: 500 YV 501
V
Sbjct: 477 TV 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-149
Identities = 189/426 (44%), Positives = 249/426 (58%), Gaps = 61/426 (14%)
Query: 79 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 138
+A AF +W+ L AER+ LRK DLL +EEL L TLE GKP++EA+GEV
Sbjct: 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDT 61
Query: 139 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 198
+ A A ++ G +P+ P +V ++P+GV G ITPWNFPL + K+ PALA G
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 199 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258
TVV+KPSE TPLTALA AEL +AG+PPGVVNVV G ++G ALL+ P+V KI+FTGST
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181
Query: 259 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 318
AVGK +M AA +K V+LELGG +P IV +DADL+ AV GA+ F N+GQ C A+R+
Sbjct: 182 AVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241
Query: 319 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378
LV E IY++F +EK+ T + D
Sbjct: 242 LVHESIYDEF-------------------------------VEKLVTVLVD--------- 261
Query: 379 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438
V +M +++EE+FGPV P++ FK EEEAI +ANDT GL
Sbjct: 262 --------------------VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLT 301
Query: 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLE 497
A +FT +L R RV+E L G V +N+ I APFGGVK SG+GREG YG++E+
Sbjct: 302 AGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTR 361
Query: 498 IKYVCL 503
K V +
Sbjct: 362 TKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 434 bits (1119), Expect = e-149
Identities = 198/457 (43%), Positives = 269/457 (58%), Gaps = 11/457 (2%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V PATGEV+A V C G ++ A+ SA A WS + ER + LRK DLL +E
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP-DRRLFVLKQPVG 171
+ +L T++ GKP++EA ++D A +E+YA A + GE +P LP + ++P+G
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP--LPGGSFAYTRREPLG 118
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V I WN+P+ + + K PALACG +V KPS FTPLTAL AE+ +AG+P GV NV
Sbjct: 119 VCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNV 178
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
V G + G L P V K++FTGS GKK+M+ AA +K V+LELGG +P I+FDDA
Sbjct: 179 VQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDA 237
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL AVNGA+ A F + GQ C RV VQ I ++F + + K +++GD E
Sbjct: 238 DLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQM 297
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-----GMTFYEPTVLSNVKSEMLVS 406
G LI++ LEKV ++E A +GAKVL GG R + P VL++ +M +
Sbjct: 298 GALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIV 357
Query: 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE- 465
REE+FGPV +L F TEEE I ANDT GLAA +FT +LQR RV L+ G +N
Sbjct: 358 REEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTY 417
Query: 466 GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
+ EV PFGG KQSG GRE ++ + ++K V
Sbjct: 418 NISPVEV-PFGGYKQSGFGRENGTAALEHYTQLKTVY 453
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 434 bits (1119), Expect = e-149
Identities = 204/472 (43%), Positives = 290/472 (61%), Gaps = 7/472 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLTAAER 95
IGG+W+D+ G+T + NPA E + + D A+ +A +AF W K+ A R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
++ L + +LL KEEL +L+T E GKPL E G+V ++ A E +R++GE +P
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ LP++ +QP+GV ITPWNFP+A+ + K+ PAL CG TVV KP+E TP AL
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKL 181
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
EL +AG+PPGVVNVV G ++G+AL+ P V ++FTGST VG+++ A K+V
Sbjct: 182 VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRV 241
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
+LE+GG P IV DDADL++A+ GAL + F +GQ C +R++V E +Y++F F +
Sbjct: 242 ALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVER 301
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FY 391
K L+VGDG E GPLIN+A LEKV + E +GA +LLGG R + G F
Sbjct: 302 AKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFV 361
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPTV ++V +M +++EE+FGPV L+ + EEAI +ANDT GL++ I+T ++ + +R
Sbjct: 362 EPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFR 421
Query: 452 VSEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-REGSKYGMDEFLEIKYV 501
LE G+ VN I EV PFGGVK+SG G RE +D F E K V
Sbjct: 422 ARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 432 bits (1114), Expect = e-148
Identities = 184/469 (39%), Positives = 278/469 (59%), Gaps = 7/469 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAER 95
IGG+W+ +T++V +PAT EV+ V + A+++A AF++ W +L+ AER
Sbjct: 3 IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEII 154
+ LR+ D L A +EL +L T E G P+ + + A + +YA A+ E
Sbjct: 63 AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER 122
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
+ V ++PVGV AI PWN PL + K+ PALA GCTVV+KPS TPL A
Sbjct: 123 RPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYL 182
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AE A +AG+PPGVVNVV + ++G+ L+ P V K++FTGSTA G+++ A + +
Sbjct: 183 LAEAAEEAGLPPGVVNVVPADR-EVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLAR 241
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
V+LELGG + IV DDADL+ AV G + A N+GQ CV R+LV Y++ +A +
Sbjct: 242 VTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAA 301
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYE 392
AV LKVGD GPL + E+VE ++ ++GA+++ GG R F E
Sbjct: 302 AVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVE 361
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+ ++V ++M +++EE+FGPV ++ + E++A+ +AND++ GL+ ++T +++R V
Sbjct: 362 PTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAV 421
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
+ + G VGVN G APFGG KQSG+GREG G+D +LE K +
Sbjct: 422 ARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSI 469
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 427 bits (1100), Expect = e-146
Identities = 198/450 (44%), Positives = 263/450 (58%), Gaps = 3/450 (0%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V +PATGE IA V + A+++A AF SW + T AERSK L K D + + EE
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 113 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 171
L L + GKPL E+ F+A A+ + G LP + ++P+G
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIG 120
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V I PWN+PL M K+ PALA G TVV+KPSE TPLT L AELA +PPGVVNV
Sbjct: 121 VVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELA-AEVLPPGVVNV 179
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
V G GDAL+ P+VR ++ TGS GKK+ AA T+K+V LELGG AP IVFDDA
Sbjct: 180 VCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ AV G A + N+GQ C A RV V E +Y++F A +AV ++VGD E
Sbjct: 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEM 299
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 411
GPL + A E+V FVE A A+VL GGRR FYEPTV++ V + + +EE+F
Sbjct: 300 GPLNSAAQRERVAGFVERA-PAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIF 358
Query: 412 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 471
GPV + F E+EAI +AND GLA+ ++T ++ R R+S L++G V VN +
Sbjct: 359 GPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAA 418
Query: 472 VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
P GG KQSG G++ S Y ++++ IK+V
Sbjct: 419 EMPHGGFKQSGYGKDLSIYALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 425 bits (1096), Expect = e-146
Identities = 186/456 (40%), Positives = 273/456 (59%), Gaps = 10/456 (2%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKE 111
V NPAT EVI G + AI++A AF++ A ER++ LR+ ++ L A KE
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 112 ELGQLITLEQGKPLK-EAVGEVDYGAKFIEFYAEEAKRVYGEII-----PATLPDRRLFV 165
EL L+ E G P+ +VD + ++A+ A E P RR+ V
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRV-V 119
Query: 166 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 225
++PVGV AITPWNFP + K+ PALA G TVV+KP+ TPL+AL E+ + +P
Sbjct: 120 RREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLP 179
Query: 226 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 285
GVVNVV G+ +G+AL T P+V ++FTGSTAVG+++MA AA T+K+V LELGG +
Sbjct: 180 AGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSAN 239
Query: 286 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345
IV DDADL A A+ N+GQ C R+LV Y++ +A + A + L VGD
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPA 299
Query: 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR-HSLGMTFY-EPTVLSNVKSEM 403
G V GPLI+ A ++VE ++ +GA+++ GG R L FY EPT+ ++V ++M
Sbjct: 300 DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDM 359
Query: 404 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 463
+++EE+FGPV ++ + ++EA+ +AND++ GL+ +++ ++ R +RV+ + G VG+
Sbjct: 360 RIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGI 419
Query: 464 NEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
N G APFGG KQSGLGRE G++EFLE K
Sbjct: 420 NGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETK 455
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 426 bits (1098), Expect = e-146
Identities = 181/460 (39%), Positives = 267/460 (58%), Gaps = 11/460 (2%)
Query: 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
G+IGG+W+ + G+T NPA GE IA V ++ + A+++A +AF W K+ A R
Sbjct: 1 GVIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRR 59
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
+ +R+ + L KE LG+L++LE GK L E +GEV ++ ++ +YG IP
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP 119
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ P RL P+GV G IT +NFP+A+ AL CG TVV KPSE TPLTA+A
Sbjct: 120 SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAV 179
Query: 216 AELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
++ + G+PPGVVN+V G D G+ L+ P+V ++FTGST VG+++ A
Sbjct: 180 TKILAEVLEKNGLPPGVVNLVTGGG-DGGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+V LELGGN IV DDADL++AV L A +GQ C R++V E +Y++F +
Sbjct: 239 FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLER 298
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMT 389
KA K +++GD EG + GPLIN+AA+EK +E A S+G VL GG+R
Sbjct: 299 LVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGN 358
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR- 448
+ EPT+++ V + + +EE F P+ ++ F + EEAI + ND GL++ IFT +L+
Sbjct: 359 YVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREA 418
Query: 449 -TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 486
W + + G+V VN E+ FGG K++G GRE
Sbjct: 419 FRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 458
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 425 bits (1094), Expect = e-146
Identities = 199/458 (43%), Positives = 279/458 (60%), Gaps = 10/458 (2%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 110
L+VHNP GEVI V + ++A+++A + L ER L + DLL
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 166
EE ++I E GKP+K+A EVD + AEEA+R+ GE IP +R + +
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 167 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 226
++PVGV AITP+NFPL ++ K+ PA+A GC VV+KP+ TPL+AL A++ ++AG+P
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286
GV+ VV G +GDA +V ++FTGS AVG+ L A A G K+++LELGGNAP I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGG--KRIALELGGNAPVI 238
Query: 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346
V DADL+ A+ F ++GQ C+ R+ V E +Y++F +AF AVK LKVGD
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 406
E GPLI++ A E+VE +VE+AV GA++L GG R ++PTVL +V + +S
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDG---ALFKPTVLEDVPRDTKLS 355
Query: 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 466
EE FGPV P++ + EEAI +AN T+ GL A IFT +L ++ +E LE G V VN+
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415
Query: 467 -LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
T+ PFGGVK+SG+GREG Y M+E E K V +
Sbjct: 416 SAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 423 bits (1088), Expect = e-144
Identities = 199/469 (42%), Positives = 288/469 (61%), Gaps = 5/469 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAE 94
I G+++DA GKT +P GEVIA+V+ ++ A+ +A AF+ W ++T E
Sbjct: 7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYE 66
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEI 153
RS+ L ++ DLL H +EL L T + GKP ++A EV A+ +YA A +++G
Sbjct: 67 RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT 126
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
+PA P ++ L +P+GV G I PWNFPL M KVGPALACG T+V+KP+E TPL+AL
Sbjct: 127 LPADGP-HHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSAL 185
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-V 272
AA+LA +AG+P GV+N+V G P G A+ + V K+ FTGST VGK +M AA + +
Sbjct: 186 LAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNL 245
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K V+LELGG +P IV +DAD++ AV A A F N GQ C +R V E IY++F +
Sbjct: 246 KPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKA 305
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
VGD F +GV QGP ++K EK+ +++E +GA ++ GG R + +
Sbjct: 306 KARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQ 365
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+ S+VK +M ++R+E+FGPV +L FKT +E I AN++ GLAA +F+ N+ +
Sbjct: 366 PTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTL 425
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
S AL+ G V VN + PFGG K SG+GRE Y ++ +L++K V
Sbjct: 426 SRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 421 bits (1084), Expect = e-144
Identities = 186/451 (41%), Positives = 276/451 (61%), Gaps = 3/451 (0%)
Query: 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 111
+PA G V+A + ++ A+++A AF+ W +++ AER+ L K DL+ A +E
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 171
L + TLE GKP+ +A GE++ A + A A+ ++G+ D VL++P+G
Sbjct: 62 RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG 121
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V G ITPWNFP ++++K+ ALA GCTVVVKPSEFT T L AEL ++AG+P GVVN+
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
V G +G A+ P V ++FTGST VGK + A AA +KKVSLELGG P IVF DA
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ A + + + N+G+ C +R+LV E I + F A + ++VGD
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEV 410
G +IN+A L K+ +V+ ++GA +LLGG R + FY+PT+ ++V +M ++REE+
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 411 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 470
FGPV +L F T +EAI +ANDT GL+A +++ ++ V+ + G V VN L +
Sbjct: 362 FGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGS 421
Query: 471 EVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
PFGG KQSG+GRE +YG++E+ E+K V
Sbjct: 422 PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 421 bits (1084), Expect = e-144
Identities = 200/467 (42%), Positives = 282/467 (60%), Gaps = 6/467 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
I G++++ G T E+ NPA GEVIA V ++ + AI++A A W+ ++ ER +
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGR 61
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
LR+ DL+ EEL +L TL+ GK L+E V ++D GA EF+A A + GEIIP
Sbjct: 62 ILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPL 121
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
P + +++P+GV I WN+PL + + K+ PALA G +V KPSE TPLTAL A
Sbjct: 122 GGPSF-AYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVA 180
Query: 217 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276
E+ +AG+P GV NVV G+ ++G L+ P V K++FTG GKK+MA AAG +K V+
Sbjct: 181 EIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVT 240
Query: 277 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 336
+ELGG +P IVFDDADL AV+GA+ F ++GQ C RV V + I E+F +
Sbjct: 241 MELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERT 300
Query: 337 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGM-TFYE 392
+ +K+GD F E GPLI+ A +KV +++E ++GA + GG R L F E
Sbjct: 301 ERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVE 360
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PTV ++ +M + REE+FGPV +L F E+E I ANDT GLA +FT +L R RV
Sbjct: 361 PTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRV 420
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
++ LE G V +N + APFGG KQSG+GRE K + + E+K
Sbjct: 421 ADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 422 bits (1086), Expect = e-144
Identities = 210/483 (43%), Positives = 295/483 (61%), Gaps = 10/483 (2%)
Query: 29 TPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--- 85
P RQ IGG+W + GK + V NPAT E I ++ ++ A+ +A AF
Sbjct: 3 IPVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNK 62
Query: 86 --SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYA 143
W++ T A R+K LR + K EL +L TL+ GKPL EA ++D A E+YA
Sbjct: 63 GKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYA 122
Query: 144 EEAKRVYG-EIIPATLPDR--RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 200
+ A+ + + P +LP + +VLK+P+GV G ITPWN+PL M T KV PALA GCT
Sbjct: 123 DLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTA 182
Query: 201 VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 260
V+KPSE +T L A++ + G+PPGV+NVV G + G L + P V KI FTGSTA
Sbjct: 183 VLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT 242
Query: 261 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 320
G+K+M AA VK VSLELGG +P IVFDD DL+ AV A+ F +GQ C +R+LV
Sbjct: 243 GRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLV 302
Query: 321 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 380
E I +F + K KN+K+ D EG GP++++ EKV F+ A S+GA +L G
Sbjct: 303 HERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCG 362
Query: 381 GRR-HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438
G+R L F+ EPT++++V + M + REEVFGPV + F TE+EAI +AND++ GLA
Sbjct: 363 GKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLA 422
Query: 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 498
+ +N+L+R RVSEA + G+V +N AP+GG+K+SG GRE ++G++ +L +
Sbjct: 423 GAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSV 482
Query: 499 KYV 501
K V
Sbjct: 483 KQV 485
|
Length = 503 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 416 bits (1071), Expect = e-141
Identities = 197/488 (40%), Positives = 279/488 (57%), Gaps = 18/488 (3%)
Query: 30 PAFSRQGL-IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 88
Q L I G +++A G+T EV NPATGEV+A V + + A++SA W+
Sbjct: 2 SRQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWA 61
Query: 89 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAK 147
+TA ERS+ LR+ D+L +EL L TL+ GKP++E V ++ GA +E+YA A
Sbjct: 62 AMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAP 121
Query: 148 RVYGEIIPATLPD----RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 203
+ GE IP RR +P+GV I WN+P+ + K PALA G ++ K
Sbjct: 122 ALEGEQIPLRGGSFVYTRR-----EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176
Query: 204 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 263
PSE TPLTAL AE+ +AG+P GV NVV G+ +G L P + K++FTG GKK
Sbjct: 177 PSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDG-RVGAWLTEHPDIAKVSFTGGVPTGKK 235
Query: 264 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 323
+MA AA ++K+V++ELGG +P IVFDDADL+ A + A+ A F +SGQ C RV VQ+
Sbjct: 236 VMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKS 295
Query: 324 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383
I F + V+ +++GD GPL++ A +KV ++E ++GA++L GG R
Sbjct: 296 IKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGER 355
Query: 384 HSLGM----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 439
+ G F PTV ++ +M + REE+FGPV +L F E+E I ANDT GLAA
Sbjct: 356 LTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAA 415
Query: 440 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
+FT +L R RV LE G+ +N S P GG KQSG+GRE ++ + +IK
Sbjct: 416 GVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIK 475
Query: 500 --YVCLGD 505
V +G
Sbjct: 476 SVQVEMGP 483
|
Length = 488 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 414 bits (1066), Expect = e-141
Identities = 188/457 (41%), Positives = 269/457 (58%), Gaps = 13/457 (2%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKE 111
V +P+TGEV A ++ G + A+ +A AF S W +L+ AER + L + L+ H +
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 171
EL +L +L+ GKPL +A +V+ A++ E+Y A +++GE IP P ++ +++P G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHG 119
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V G I PWN+PL + R V PALA G VVVKP+E PLTAL AELA +AG+P G +NV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
V G + G AL+ P V I+FTGS G +M AA V V+LELGG +P IVF DA
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL A+ + A +N+GQTC +R+LV IY++ + + + L+VG G E
Sbjct: 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG-LEDPDL 298
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSRE 408
GPLI+ L++VE FV A ++GA+++ GGR G F PT+L +V + +++E
Sbjct: 299 GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQE 358
Query: 409 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE--- 465
E+FGPV ++ F E EAI +AN T+ GL A ++T + R RV+ L G V VN
Sbjct: 359 EIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGA 418
Query: 466 -GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
G I PFGGVK+SG GRE + + + K V
Sbjct: 419 GGGIEL---PFGGVKKSGHGREKGLEALYNYTQTKTV 452
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 415 bits (1068), Expect = e-141
Identities = 191/475 (40%), Positives = 280/475 (58%), Gaps = 10/475 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I G+++ + G+T E +PAT EV+ +V+ G + A +A +AF W++L AAER
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIP 155
+ L K DL+ H +E+ L L+ G+PL++ +V A+ F+A++ + + G P
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ ++ PVG G ITPWN P + T K+ PALA G TVV+KP+E++PLTA
Sbjct: 124 V--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARL 181
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
AE+A +AG+P GV N+V G + G AL+ P V+ ++FTG TA G +M A T+K+
Sbjct: 182 AEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRF 241
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
S+ELGG +P IVFDDADL A++ + F +G+ C ++R+LVQE I E F + +
Sbjct: 242 SMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVER 301
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-------GM 388
V+ ++VG GPLI+ L KV +VE A +GA +L+GG R
Sbjct: 302 VRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRG 361
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448
+ PTV + + M +++EE+FGPV ++ FK EEEAI ANDT GLA Y++TN++ R
Sbjct: 362 NYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGR 421
Query: 449 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
RV+ ALE G++ VN + PFGGVK SG+GREG Y D + E K V L
Sbjct: 422 AHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 412 bits (1060), Expect = e-140
Identities = 194/460 (42%), Positives = 266/460 (57%), Gaps = 16/460 (3%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAAERSKGLRKWYDLLMAH 109
LEV NP TGEV+ V T++A+ A A + S LT +RS L K LL A
Sbjct: 1 LEVRNPYTGEVVGTVP----AGTEEALREALALAASYRSTLTRYQRSAILNKAAALLEAR 56
Query: 110 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFV 165
+EE +LITLE G LK+ EV A + F A EA R GE A R++F
Sbjct: 57 REEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFT 116
Query: 166 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 225
L++P+GV AITP+N PL + K+ PA+A +V+KPSE TPL+A+ A+L +AG+P
Sbjct: 117 LREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLP 176
Query: 226 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 285
P +++VV G +IGD L+T P V +TFTG AVGK + A A K+ LELGGN P
Sbjct: 177 PDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGY--KRQLLELGGNDPL 234
Query: 286 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345
IV DDADL A A+A + NSGQ C R+LV E + ++F D + L VGD
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLV 405
G +I++ A ++E VE+A+++GA+VLLG +R Y PTVL +V + +
Sbjct: 295 DPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQG---ALYAPTVLDHVPPDAEL 351
Query: 406 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 465
EE FGPVAP++ K +EAI ++N T GL++ + TN+L R+ E L+ G V VNE
Sbjct: 352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNE 411
Query: 466 GL-ISTEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 503
+E++PFGGVK SGLG +EG + M E +K L
Sbjct: 412 VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 411 bits (1058), Expect = e-140
Identities = 198/469 (42%), Positives = 288/469 (61%), Gaps = 7/469 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAER 95
I G+++D+ G T++V+NP+TG++I ++ + A+ A AF W K++ ++R
Sbjct: 11 INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKR 70
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEII 154
+ L K DL+ + + L + L+ GK A +V A +Y A +++G++I
Sbjct: 71 GRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVI 130
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
T + + +P+GV G I PWNFPL M K+ PALA G T+V+KPSE TPL+AL
Sbjct: 131 -ETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VK 273
+L +AG PPGV+NVV G G+A+ + + K+ FTGST VG+K+M AA + +K
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
KV+LELGG +P IVFDDADL AV F N GQ C +R+ VQEGIY+KF F
Sbjct: 250 KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFK 309
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 393
+ K LKVGD F E QGP +++ E++ +++E ++GA V GG+RH F EP
Sbjct: 310 EKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEP 369
Query: 394 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 453
T+ ++V +M + +EE+FGPV ++ FKTEEEAI AND+ GLAA +FTNN+ RV+
Sbjct: 370 TIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVA 429
Query: 454 EALEYGLVGVN-EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
AL+ G V VN L+ +V PFGG KQSG+GRE +Y ++ + +IK V
Sbjct: 430 NALKAGTVWVNCYNLLHHQV-PFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 408 bits (1052), Expect = e-139
Identities = 176/435 (40%), Positives = 249/435 (57%), Gaps = 10/435 (2%)
Query: 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131
+ A+ +A AF +WSK +ER L K DLL + ++E + + E G A
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191
VD A + A ++ G IP+ P V+K+PVGV I PWN P+ + TR +
Sbjct: 61 VDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIA 120
Query: 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQ 248
LA G TVV+K SE +P T + +AG+P GV+NVV +AP++ +AL+ P
Sbjct: 121 YPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPA 180
Query: 249 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 308
VRK+ FTGST VG+ + AA +K V LELGG AP IV +DADL+ A N AL F NS
Sbjct: 181 VRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240
Query: 309 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 368
GQ C+ R++V E I ++F + A + L G VV G L++ AA ++V+ V+
Sbjct: 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVKELVD 295
Query: 369 DAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427
DA+SKGAK+++GG S T PT+L NV +M + EE FGPV ++ K EEEA+
Sbjct: 296 DALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAV 355
Query: 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGRE 486
+AND+ GL+A +FT +L R V++ +E G V +N + E P GGVK SG GR
Sbjct: 356 RIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRF 415
Query: 487 GSKYGMDEFLEIKYV 501
K+G+DEF E K++
Sbjct: 416 NGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 408 bits (1050), Expect = e-139
Identities = 187/456 (41%), Positives = 265/456 (58%), Gaps = 15/456 (3%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 110
LEV NP TGEV+A V+ G + ++AI++A AF L A R+ L L
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 166
EEL + I LE GKP+K+A GEV AEEA R+YGE++P A R+ V
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 167 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 226
+ P+G AITP+NFPL ++ KV PA+A GC V+KP+ TPL+AL E+ + G+P
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPK 180
Query: 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286
G +V+ + D D L+T +++ ++FTGS AVG L A AG KKV LELGGNA I
Sbjct: 181 GAFSVLPCSRDD-ADLLVTDERIKLLSFTGSPAVGWDLKA-RAGK-KKVVLELGGNAAVI 237
Query: 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346
V DADL+ A + F +GQ+C+ RVLV +Y++F VK LK GD
Sbjct: 238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKD 297
Query: 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 406
+ GP+I+++ E+VE +V +AV GAK+L GG+R EPT+L +V +M V+
Sbjct: 298 DATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDG---ALLEPTILEDVPPDMEVN 354
Query: 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 466
EEVFGPV + + +EA+ ND+ GL A +FT +L++ R + LE G V +N+
Sbjct: 355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND- 413
Query: 467 LIST---EVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
+ T + P+GGVK SG+GREG +Y ++E E +
Sbjct: 414 -VPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPR 448
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 404 bits (1042), Expect = e-138
Identities = 183/434 (42%), Positives = 255/434 (58%), Gaps = 16/434 (3%)
Query: 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 134
A+ A AF +W K + AER+ LRK DLL K+EL +LITLE GKP+ EA EV+
Sbjct: 3 AALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEK 62
Query: 135 GAKFIEFYAEEAKRVYGEIIPATLPDRRL-------FVLKQPVGVAGAITPWNFPLAMIT 187
A +YAE A A L D + +V +P+GV I PWNFP +
Sbjct: 63 CAWICRYYAENA--------EAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVF 114
Query: 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 247
R P L G TV++K + P ALA EL +AG P GV ++ ++ + +A++ P
Sbjct: 115 RFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQV-EAIIADP 173
Query: 248 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 307
+VR +T TGS G+ + A A +KK LELGG+ P IV DDADL+ AV A+ + +N
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQN 233
Query: 308 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367
+GQ+C+ A R +V E +Y++F + F +A+ LKVGD E GPL K +++ V
Sbjct: 234 AGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQV 293
Query: 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427
E+AV+ GA +LLGG+R FY PTVL++V M EE+FGPVA ++ K EEEAI
Sbjct: 294 EEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAI 353
Query: 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 487
+AND+ GL +FT +L+R RV+ LE G+V +N + S PFGGVK+SG GRE
Sbjct: 354 ALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGREL 413
Query: 488 SKYGMDEFLEIKYV 501
++G+ EF+ IK V
Sbjct: 414 GRFGIREFVNIKTV 427
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 403 bits (1038), Expect = e-137
Identities = 179/464 (38%), Positives = 279/464 (60%), Gaps = 5/464 (1%)
Query: 40 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 99
G+W D +T++V NP TGE +A + ++ +A +A A W+ ER++ L
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 100 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 159
K +L ++E+ + + E G +A E A R+ G I+P+ +P
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 160 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAEL 218
+ V ++P+GV G I+PWNFPL + R V PALA G VV+KP+ TP+T L A++
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKI 180
Query: 219 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 278
+AG+P GV+NVV+G +IGDA + P R I+FTGST VG+ + A +KKV+LE
Sbjct: 181 FEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240
Query: 279 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 338
LGGN P +V +DAD++ AVN A+ KF + GQ C+ NR++V E +Y++F + F + VK
Sbjct: 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKA 300
Query: 339 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 398
L GD V GPLIN++ ++ + +E AV +GA +L+GG + EPTVLS+
Sbjct: 301 LPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVL---EPTVLSD 357
Query: 399 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 458
V ++M ++REE+FGPVAP++ EEEA+ +ANDT GL+ +FT++L+R + + ++
Sbjct: 358 VTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDA 417
Query: 459 GLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
G+ +N+ ++ E PFGG K SGLGR ++ ++EF K++
Sbjct: 418 GMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 399 bits (1028), Expect = e-135
Identities = 183/453 (40%), Positives = 250/453 (55%), Gaps = 7/453 (1%)
Query: 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113
NPATGEV+ V E A++ A A +W+ L R++ L +W L H +EL
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIP--ATLPDRRLFVLKQPV 170
+L+ E GKP +A EV + I++ A A RV +P +P+++ V +P
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPY 120
Query: 171 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230
GV G I+PWN+PL + PALA G VV+KPSE TPL AE AG P GV+
Sbjct: 121 GVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQ 180
Query: 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290
VV G+ G AL+ + V K+ FTGS A G+K+MA AA + V LELGG P IV D
Sbjct: 181 VVTGDGA-TGAALIDAG-VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLAD 238
Query: 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350
ADL A A+ N+GQTC+ RV V E +Y++F + L+ G
Sbjct: 239 ADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDAD 298
Query: 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 410
GP+ L+ V V+DAV+KGAK L GG R + G FYEPTVL++V +M V REE
Sbjct: 299 IGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREET 358
Query: 411 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 470
FGPV P++ E+EAI +AND+ GL+A +F+ +L R ++ LE G V +N+ L++
Sbjct: 359 FGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTA 418
Query: 471 EV--APFGGVKQSGLGREGSKYGMDEFLEIKYV 501
+ PFGGVK SG GR G+ EF K +
Sbjct: 419 GIPALPFGGVKDSGGGRRHGAEGLREFCRPKAI 451
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 398 bits (1023), Expect = e-134
Identities = 212/485 (43%), Positives = 300/485 (61%), Gaps = 13/485 (2%)
Query: 23 PSMQ-SYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAF 81
P +Q SYT Q LI G+++DA GKT +P TGEVIA+V+ ++ A+++A
Sbjct: 51 PPVQVSYT-----QLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAAR 105
Query: 82 DAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKF 138
AF+ W K+TA ERS+ L ++ DLL H +EL L T + GKP +++ E+ A+
Sbjct: 106 KAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARL 165
Query: 139 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 198
+YA A +++G +PA P + L +P+GVAG I PWNFPL M KVGPALACG
Sbjct: 166 FRYYAGWADKIHGLTVPADGP-HHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 224
Query: 199 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258
T+V+K +E TPL+AL AA+L +AG+PPGV+NVV G P G AL + V K+ FTGST
Sbjct: 225 TIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGST 284
Query: 259 AVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 317
GK ++ AA + +K V+LELGG +P IV +DAD++ AV A A F N GQ C +R
Sbjct: 285 DTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSR 344
Query: 318 VLVQEGIYEKFAD-AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 376
V E +Y++F + A ++A+K + VGD F +GV QGP I+ EK+ +++ V GA
Sbjct: 345 TFVHERVYDEFVEKAKARALKRV-VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGAT 403
Query: 377 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 436
+ GG R + +PTV SNV+ +ML++++E+FGPV +L FK +E I AN+T G
Sbjct: 404 LECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYG 463
Query: 437 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 496
LAA +FT NL +S AL G V VN + PFGG K SG+GRE Y ++ +L
Sbjct: 464 LAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYL 523
Query: 497 EIKYV 501
++K V
Sbjct: 524 QVKAV 528
|
Length = 538 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 395 bits (1016), Expect = e-133
Identities = 200/471 (42%), Positives = 290/471 (61%), Gaps = 11/471 (2%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFN--SWSKLTAAE 94
I G+++DA GKT E +P TGEVIA ++ G KE D A+ +A +AF+ W +++ E
Sbjct: 25 INGEFVDAASGKTFETRDPRTGEVIARIA-EGDKEDVDLAVKAAREAFDHGPWPRMSGFE 83
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGK-PLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 153
R + + K+ DL+ H EEL L T++ GK ++ A + +YA A +++GE
Sbjct: 84 RGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGET 143
Query: 154 IPATLPDRRL--FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+ + R+L + LK+P+GV G I PWNFP M KV PALA GCT+VVKP+E TPL+
Sbjct: 144 LKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLS 200
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM-AGAAG 270
AL A LA AG+P GV+NVV G P G A+ + V K++FTGST VG+K+M A A
Sbjct: 201 ALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATS 260
Query: 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 330
+K+VSLELGG +P ++FDDAD+++AV+ AL F N G+ CV ++RV VQEGIY++F
Sbjct: 261 NLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVK 320
Query: 331 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390
+ K+ VGD F QGP ++K EK+ +++E +GA +L GG+ +
Sbjct: 321 KLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYY 380
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450
EPT+ ++V +M ++++E+FGPV L+ FKT EEAI AN+T GLAA I T +L
Sbjct: 381 IEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVAN 440
Query: 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
VS ++ G + VN PFGG K SG GR+ +D++L++K V
Sbjct: 441 TVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSV 491
|
Length = 501 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-133
Identities = 179/455 (39%), Positives = 260/455 (57%), Gaps = 8/455 (1%)
Query: 55 NPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEE 112
+PATGEVI + G E + AI++A AF+ W+ R++ L + D A+ E
Sbjct: 3 DPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAER 61
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 172
L +L+ LE GK L EA E+ + +YA A+ G +I P VL++P+GV
Sbjct: 62 LARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPMGV 120
Query: 173 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE-LALQAGIPPGVVNV 231
AG I PWN P+ ++ R + PALA GCTVVVKP+ T A LA +P GVVN+
Sbjct: 121 AGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNL 180
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
+ + L+ SP V I+FTGSTA G+ +MA AA T+K++ LELGG PCIVFDDA
Sbjct: 181 FTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDDA 240
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ A+ A +GQ C+ +RVLVQ I ++ D + + +KVG G
Sbjct: 241 DLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDM 300
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVSRE 408
GPLI++A +++V+ VE A++ GA+V+L G + G+ F PT+L + + +E
Sbjct: 301 GPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQE 360
Query: 409 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 468
E+FGPV L F E EA+ +ANDT+ GLAA ++T +L R RV+ A+ G V +N+
Sbjct: 361 EIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNK 420
Query: 469 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
A GG +QSGLGR +++F+E K++ L
Sbjct: 421 LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 389 bits (1002), Expect = e-131
Identities = 180/466 (38%), Positives = 255/466 (54%), Gaps = 17/466 (3%)
Query: 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK-LTA 92
+ LI G+W ++ GKT+EV++P GEVI +V + E +A +A+DA W +
Sbjct: 2 FKYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPL 60
Query: 93 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 152
ER L K+ DLL +KEE+ L+ E GK LK+A+ EVD +I EE KR+ G+
Sbjct: 61 EERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGD 120
Query: 153 IIPATLPDRRLFVL----KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 208
+P + ++P+GV AI P+N+PL + K+ PAL G TVV KP+
Sbjct: 121 SLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQG 180
Query: 209 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268
L + AE AG P GVVNVV G +IGD L+T ++ I+FTGST VG +L
Sbjct: 181 VLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK-- 238
Query: 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
+K++ LELGG P IV DADL +A + SGQ C RVLV E + ++
Sbjct: 239 QHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADEL 298
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
+ + V LKVG + GV PLI+ + + VE ++DAV+KGA VL GG R G
Sbjct: 299 VELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR--EGG 356
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448
PT+L V +M ++ EE FGPV P++ EEAI +AN +N GL A IFT ++ +
Sbjct: 357 NLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINK 416
Query: 449 TWRVSEALEYGLVGVNEGLISTE----VAPFGGVKQSGLGREGSKY 490
++++ALE G V +N + PF G K SG+G +G
Sbjct: 417 ARKLADALEVGTVNINS---KCQRGPDHFPFLGRKDSGIGTQGIGD 459
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 389 bits (1000), Expect = e-131
Identities = 184/473 (38%), Positives = 272/473 (57%), Gaps = 8/473 (1%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERS 96
I G+ + K L++ NPAT +VIA+V+ + A++SA+ AF S W+K T AER
Sbjct: 4 IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERG 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 155
+ L + DL+ H EEL QL TL GK + + EV A F+ ++A A ++ GE +
Sbjct: 64 RILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLA 123
Query: 156 ATLPDRR-----LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210
++P + F ++PVGV I PWNF + + K+G ALA GCT+V+KPSEFTPL
Sbjct: 124 PSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPL 183
Query: 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270
T L AELA +AGIP GV+NVV G +G L++ P V K++FTGS A GKK+ AA
Sbjct: 184 TLLRVAELAKEAGIPDGVLNVVNGKG-AVGAQLISHPDVAKVSFTGSVATGKKIGRQAAS 242
Query: 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 330
+ +V+LELGG DAD++ V G L A F + GQ C R V +++
Sbjct: 243 DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVT 302
Query: 331 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390
+A+ + +VG E V+ GPL N+ +KV ++++DA ++G +++ GG + F
Sbjct: 303 KLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYF 362
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450
+PT++ ++ + REE FGPV + ++ EEE I + NDT GL A ++TNNL +
Sbjct: 363 VQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKAL 422
Query: 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
R +E G V VN PFGG+KQSG+GRE +D++ E+K V +
Sbjct: 423 RYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMI 475
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 380 bits (979), Expect = e-127
Identities = 186/453 (41%), Positives = 252/453 (55%), Gaps = 16/453 (3%)
Query: 43 IDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKW 102
+D G T EV P TGE +A V + + A + A A +W+ ER+ L ++
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRF 85
Query: 103 YDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA------KRVYGEIIPA 156
+DL++ ++EEL L+ LE GK + A EV A +YA A +R G +
Sbjct: 86 HDLVLENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVL 145
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
T + L+QP GV G I+PWN+PL + PAL G VV+KP TPLTALAA
Sbjct: 146 T----KTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAV 201
Query: 217 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276
EL +AG+P + VV G P +G AL+ + FTGSTA G+ L A + S
Sbjct: 202 ELLYEAGLPRDLWQVVTGPGPVVGTALV--DNADYLMFTGSTATGRVLAEQAGRRLIGFS 259
Query: 277 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 336
LELGG P IV DDADL+ A GA+ A F N+GQ C+ R+ V E IY++F AF AV
Sbjct: 260 LELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAV 319
Query: 337 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHSLGMTFYEPTV 395
+ +++G G+ G LI++A LE V V+DAV+KGA VL GG+ R LG FYEPTV
Sbjct: 320 RAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTV 379
Query: 396 LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 455
L+ V +M ++REE FGPV + +EA+ ANDT GL A ++T + R ++
Sbjct: 380 LTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAAR 439
Query: 456 LEYGLVGVNEGLIST---EVAPFGGVKQSGLGR 485
+ G V VNEG + AP GG+K SGLGR
Sbjct: 440 IRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR 472
|
Length = 524 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 375 bits (966), Expect = e-127
Identities = 169/406 (41%), Positives = 246/406 (60%), Gaps = 1/406 (0%)
Query: 99 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 158
LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 159 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 218
P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP A+A A++
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 120
Query: 219 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 278
+ G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA + KV LE
Sbjct: 121 VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLE 180
Query: 279 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 338
LGG AP IV DDADL++AV + ++ NSGQ C CA RV VQ+GIY++F + +A++
Sbjct: 181 LGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240
Query: 339 LKVGDGFGEGVVQ-GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 397
++ G+ + GPLIN AALE+VE V AV +GA+V LGG+ +Y PT+L
Sbjct: 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLL 300
Query: 398 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 457
+V+ EM + EE FGPV P++ F T EEAI MAND++ GL + I+T NL + + L+
Sbjct: 301 DVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLK 360
Query: 458 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
+G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 361 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 406
|
Length = 409 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-127
Identities = 179/480 (37%), Positives = 263/480 (54%), Gaps = 26/480 (5%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I G+W+ G+ + +NP G+V+ + ++ A+ +A +AF +W K + AER+
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKE--------AVGEVDYGAKFIEFYAEEAKR 148
L K D + + E L TL+ GKP++E A+ Y A I A+E
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIR--AQEGSL 121
Query: 149 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 208
EI TL + +P+GV G I PWNFPL M K+ PALA G TVV+KP+ T
Sbjct: 122 S--EIDEDTLS----YHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQT 175
Query: 209 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268
PL+ L EL + +P GVVNVV G + G L + P++ K+ FTGST VG+ +M A
Sbjct: 176 PLSILVLMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYA 234
Query: 269 AGTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 323
A + V+LELGG +P I FDDA D + N G+ C C +R LVQE
Sbjct: 235 AENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQES 294
Query: 324 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383
IY++F + + + +KVG+ + G ++K LEK+ ++V+ +GA+VL GG R
Sbjct: 295 IYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGER 354
Query: 384 HSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 439
+LG FYEPT++ ++M + +EE+FGPV ++ FK EEEAI +ANDT GL
Sbjct: 355 LTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGG 414
Query: 440 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
++T ++ R RV+ ++ G V VN APFGG K+SG+GRE K +D + + K
Sbjct: 415 GVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 377 bits (970), Expect = e-126
Identities = 183/470 (38%), Positives = 274/470 (58%), Gaps = 11/470 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I G+W+ G+T++ +NPA GE ++ ++ + A+ +A +AF +W K T AER+
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 155
L K D++ +KE L + TL+ GKP++E ++ A ++A + G
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS--- 120
Query: 156 ATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
A + D VL++P+GV G I PWNFP M K+ PALA G TVV+KPS T L+ L
Sbjct: 121 ANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
A++ +Q +P GVVN+V G G+ LL P + K+ FTGST VG+ + AA +
Sbjct: 181 ELAKI-IQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+LELGG + I+FDDA+ + A+ GA N GQ C +R+ VQEGIY++F
Sbjct: 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLK 299
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---- 389
+ +N+KVG+ G +NK L+K+ ++V+ A +GAK+L GG R +
Sbjct: 300 EKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGF 359
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
F EPT++ NV ++M V++EE+FGPVA ++ FKTE+E I MAND+ GL +FT ++ R
Sbjct: 360 FIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRA 419
Query: 450 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
RV+ A+E G V VN APFGG K+SG+GRE K +D + ++K
Sbjct: 420 LRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMK 469
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 370 bits (951), Expect = e-124
Identities = 190/457 (41%), Positives = 261/457 (57%), Gaps = 10/457 (2%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V NPATG+VI V + A+++A AF W+ A ER K L + D L A EE
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 113 LGQLITLEQGKPLK-EAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 171
L +L+ LE G L+ +A E A ++ A + GE +P PD + +++P+G
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLG 119
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V GAI PWN PL + K+ PAL G TVV+K +E PL L AE+ L +P GV+NV
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEI-LAQVLPAGVLNV 178
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
+ G + G AL+ P V K+TFTGST VGK + AA + VSLELGG +P IVF DA
Sbjct: 179 ITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238
Query: 292 DLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350
DL+ AV+GA+A +F GQ+C +R+ V E IY+ F + + LK+GD E
Sbjct: 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATD 298
Query: 351 QGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLV 405
G +I++ KV +++ +S GA VL GG G F +PT+ S V +E +
Sbjct: 299 IGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRL 358
Query: 406 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 465
+REE+FGPV + +K E+E I MAND++ GLAAY++T +L R R + ALE G V VN+
Sbjct: 359 AREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQ 418
Query: 466 GLISTEVAPFGGVKQSGLGREGSKYGM-DEFLEIKYV 501
G +GG KQSGLGRE S GM + F + K V
Sbjct: 419 GGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTV 455
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 369 bits (948), Expect = e-123
Identities = 179/479 (37%), Positives = 278/479 (58%), Gaps = 15/479 (3%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTA 92
Q I G+++DA GKT NP G VI VS ++ A+++A +AF + W K+ A
Sbjct: 7 QLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNA 66
Query: 93 AERSKGLRKWYDLLMAHKEELGQLITLEQGK----PLKEAVGEVDYGAKFIEFYAEEAKR 148
+R + + + DL+ H+EEL + +L+ G LK VG + ++A +
Sbjct: 67 RDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVG---MSIQTFRYFAGWCDK 123
Query: 149 VYGEIIPAT--LPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 205
+ G+ IP P+R L ++P+GV G + PWN+PL M+ K+ LA G TVV+KP+
Sbjct: 124 IQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPA 183
Query: 206 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265
+ TPLTAL AEL ++AG P GV+N++ G+ +G L P VRK+ FTGST +GK +M
Sbjct: 184 QVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243
Query: 266 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 324
A +KKVSLELGG +P I+F D D++ AV +++ F N G+ C+ A R+ V+E I
Sbjct: 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESI 303
Query: 325 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 384
+++F + VK +K+GD GP +KA L+K+ + E V +GA ++ GG++
Sbjct: 304 HDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQV 363
Query: 385 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIF 442
F+EPTV ++V+ M +++EE FGP+ + F + + ANDT GLA+ +F
Sbjct: 364 DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVF 423
Query: 443 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
T ++ + VS+ LE G V VN + APFGG KQSG G++ + ++E+L+ K V
Sbjct: 424 TKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 363 bits (935), Expect = e-121
Identities = 168/466 (36%), Positives = 248/466 (53%), Gaps = 15/466 (3%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I G+W+++ + L+V+NPATGEVIA V +E A+++A AF +WS +R
Sbjct: 4 FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQ 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
+ + K+ LL + +EL +LITLE GK L +A G+V G + +EF + GE +
Sbjct: 64 QVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLEN 123
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLTALAA 215
+ +QP+GV ITP+NFP AMI A+ACG T V+KPSE P A+
Sbjct: 124 VARGIDTYSYRQPLGVVAGITPFNFP-AMIPLWMFPMAIACGNTFVLKPSERVPGAAMRL 182
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
AEL +AG+P GV+NVV G + +ALL P ++ ++F GST VG+ + AA K+V
Sbjct: 183 AELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRV 241
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
G +V DADL N + A F +GQ C+ + + +++ +
Sbjct: 242 QALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVER 301
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE--- 392
K LKVG G G GP+I+ AA E++E +E V +GAK++L GR + YE
Sbjct: 302 AKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVK--VPGYENGN 359
Query: 393 ---PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
PT+L NV +M + +EE+FGPV ++ T +EAI + N G A IFT +
Sbjct: 360 FVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAA 419
Query: 450 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 493
+ ++ G+VG+N I +A FGG K S G + YG D
Sbjct: 420 RKFQREVDAGMVGINVP-IPVPLAFFSFGGWKGSFFG-DLHFYGKD 463
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-121
Identities = 175/454 (38%), Positives = 249/454 (54%), Gaps = 8/454 (1%)
Query: 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113
P TGE + + + + A + A A +W+ AER+ +++DL++ ++EL
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIPATLPD-RRLFVLKQPVG 171
LI LE GK + A EV A +YA A+R+ +P R V ++P G
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKG 120
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V G I+PWN+PL + PAL G VV+KP T LTAL A EL ++AG+P + V
Sbjct: 121 VVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQV 180
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
V G ++G A++ + FTGSTA G+ + A + SLELGG P IV +DA
Sbjct: 181 VTGPGSEVGGAIVD--NADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ A GA+ A F N+GQ CV R+ V E +Y++F F + L++G G
Sbjct: 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDM 298
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEV 410
G LI++A L++V V+DAV+KGA VL GGR R LG FYEPTVL+ V +M + EE
Sbjct: 299 GSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEET 358
Query: 411 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 470
FGPV + ++EAI +ANDT+ GL A ++T + R R++ L G V VNEG +
Sbjct: 359 FGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAA 418
Query: 471 EV---APFGGVKQSGLGREGSKYGMDEFLEIKYV 501
AP GG+K SGLGR G+ ++ E + V
Sbjct: 419 WASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTV 452
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-120
Identities = 183/461 (39%), Positives = 273/461 (59%), Gaps = 13/461 (2%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
I GKW+ + K+ NPATGEV+A+V ++ A+++A AF SWS L R++
Sbjct: 26 INGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRAR 85
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPA 156
L + + H+ L +L+ GKP++E+ ++ A+ +A + +++
Sbjct: 86 HLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHA-----GWAQLLDT 140
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
L +PVGV G I PWNFPL M+ K+ PALA G TVV+KP+E+TPLTAL A
Sbjct: 141 ELAGW------KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFA 194
Query: 217 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276
E+ +AG+PPGV+N+V GN G AL P V K+ FTGST VG+ L AGT KK+S
Sbjct: 195 EICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLS 253
Query: 277 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 336
LELGG +P IVFDDADL+ AV G + A + N GQ C +R+LVQE + E+ + +
Sbjct: 254 LELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERM 313
Query: 337 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 396
+L+VGD + + G +++ A L+++ VE+ ++GA V G FY PT+
Sbjct: 314 SHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLF 373
Query: 397 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 456
+NV +++EE+FGPV +L F+T +EA+ +AN+T GLAA +++ NL V+ +L
Sbjct: 374 TNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSL 433
Query: 457 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 497
+ G+V +N + A FGG ++SG GREG K G+ E+L
Sbjct: 434 KAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-118
Identities = 183/480 (38%), Positives = 253/480 (52%), Gaps = 13/480 (2%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAA 93
+ I G ++++ GKT NP G VIA V G E A+++A A W K+T A
Sbjct: 2 RNFINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVA 59
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGE 152
ER+ L D + ++ + GKP A ++ GA +A+ K E
Sbjct: 60 ERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTE 119
Query: 153 IIPATLPDRRL---FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209
PD + + +++P+GV G I+PWN PL ++T KVGPALACG TVVVKPSE TP
Sbjct: 120 CFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179
Query: 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS-PQVRKITFTGSTAVGKKLMAGA 268
TA E+ G+P GV NVV G PD LT P V ITFTG T G +M A
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239
Query: 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
A VK VS ELGG IVF D D + AV G L + F N+GQ C+ RV V+ I+++F
Sbjct: 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRF 299
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
A ++LK+G GPLI+ +KV ++ AV +GA V+ GG G
Sbjct: 300 VAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGD 359
Query: 389 -----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 443
+ +PT+ + + V EE+FGP + F +EEE I +ANDT GLAA ++T
Sbjct: 360 ALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWT 419
Query: 444 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
+L R RV+ +E G+V VN + PFGG K SG+GREG + ++ + E+ VC+
Sbjct: 420 EDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI 479
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 353 bits (908), Expect = e-117
Identities = 172/446 (38%), Positives = 247/446 (55%), Gaps = 8/446 (1%)
Query: 59 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLIT 118
G V+ V + A + A A +W+ ER+ LR+ DLL H +E+ I
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIV 60
Query: 119 LEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP 178
E G +A EV + A + GEI+P+ P R + P+GV G I+P
Sbjct: 61 RESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISP 119
Query: 179 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAP 237
+NFPL + R V PALA G VV+KP TP++ + A L +AG+P GV++V+ G
Sbjct: 120 FNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GA 178
Query: 238 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 297
D G+AL+ P V I+FTGSTAVG+K+ A +KKVSLELGG IV DDADL++A
Sbjct: 179 DAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAA 238
Query: 298 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 357
+ F + GQ C+ A R LV E + + + + K+L VGD V GPLIN
Sbjct: 239 SNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINA 298
Query: 358 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 417
L++V V+D+V+ GA++ GG L FY PTVLS VK M EE+FGPVAP+
Sbjct: 299 RQLDRVHAIVDDSVAAGARLEAGGTYDGL---FYRPTVLSGVKPGMPAFDEEIFGPVAPV 355
Query: 418 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFG 476
F ++EEA+ +ANDT GL+A I + ++ R +++ L G++ +N+ ++ E PFG
Sbjct: 356 TVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFG 415
Query: 477 GVKQSGLG-REGSKYGMDEFLEIKYV 501
G+ SG G R G +EF + ++V
Sbjct: 416 GMGASGNGSRFGGPANWEEFTQWQWV 441
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-113
Identities = 178/468 (38%), Positives = 264/468 (56%), Gaps = 8/468 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAE 94
I G++ A + +T E +P T +A ++ + A+S+A F WS + A+
Sbjct: 23 FINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAK 82
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 153
R L K DL+ AH EEL L TL+ GKP++ ++ ++ A+ I +YAE +VYGE+
Sbjct: 83 RKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV 142
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
T ++++PVGV AI PWNFPL + K+GPALA G +V++KPSE +PL+A+
Sbjct: 143 AT-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAI 201
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-V 272
A LA +AG+P GV+NVV G + G AL + I FTGST GK+L+ A + +
Sbjct: 202 RLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNM 261
Query: 273 KKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
K+V LE GG + IVF D DL A + A F N GQ C+ R+L++E I ++F
Sbjct: 262 KRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLAL 321
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ +N + G G LI+ A + V +F+ + SKG ++LL GR L
Sbjct: 322 LKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGL-AAAI 379
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
PT+ +V +SREE+FGPV + F +EE+A+ +AND+ GL A ++T +L R R
Sbjct: 380 GPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHR 439
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
+S L+ G V VN PFGG KQSG GR+ S + +++F E+K
Sbjct: 440 MSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELK 487
|
Length = 494 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 340 bits (873), Expect = e-112
Identities = 166/454 (36%), Positives = 245/454 (53%), Gaps = 7/454 (1%)
Query: 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112
V NPATG+V+A V + A+++A AF W T ER++ LR+ L H EE
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 172
L + L+ G P+ +G+V A ++++A + GE IP + L++P GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGV 119
Query: 173 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 232
I +N PL K+ LA G TVVVKP E PL+AL AELA + +PPGV N++
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNIL 178
Query: 233 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292
G+ G AL+ P V++I GS G+ +M AA +K V+LELGG IVF DAD
Sbjct: 179 PGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238
Query: 293 LNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
A + A+A F GQ+C +R+ V E IY++ + V +KVGD
Sbjct: 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTM 298
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFY-EPTVLSNVKSEMLVSR 407
GPL+++ ++V +++ A +GA+++ GG R +L FY EPTV ++V M ++R
Sbjct: 299 GPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAR 358
Query: 408 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 467
EE+FGPV +L ++ E E + AN GL A I+TN++ + R + +E G V +N
Sbjct: 359 EEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSS 418
Query: 468 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
APFGGVK SG+GRE + + + K V
Sbjct: 419 RHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 338 bits (870), Expect = e-111
Identities = 167/481 (34%), Positives = 254/481 (52%), Gaps = 22/481 (4%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+IGGK + + +E NPA EV+ V +E + A+ +A AF +W + ER
Sbjct: 36 VIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEER 93
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII- 154
++ L + LL + EL + LE GK EA +V F+E+YA E R+ G +
Sbjct: 94 ARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVE 153
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
D R +P+GV I+PWNFPLA++ AL G TVV+KP+E TP+ A
Sbjct: 154 MVPGEDNRYVY--RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAK 211
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT--- 271
E+ +AG+PPGVVN + G ++GD L+ P VR I FTGS VG ++ AA
Sbjct: 212 LVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPG 271
Query: 272 ---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
+K+V E+GG IV +DADL+ A G + + F GQ C +RV+V E +Y++F
Sbjct: 272 QKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEF 331
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSL 386
+ + K LKVGD V GP+I+K A +++ ++E S+G ++LLGG +
Sbjct: 332 LERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELAA 390
Query: 387 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446
F +PT+ ++V + +++EE+FGPV ++ K +EA+ +ANDT GL +F+ +
Sbjct: 391 EGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSP 450
Query: 447 QRTWRVSEALEYGLVGVNEGLIST----EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYV 501
+ R E G + N T PFGG K SG G + G + +F++ K V
Sbjct: 451 EHLERARREFEVGNLYANRK--ITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508
Query: 502 C 502
Sbjct: 509 T 509
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 332 bits (853), Expect = e-109
Identities = 148/449 (32%), Positives = 222/449 (49%), Gaps = 4/449 (0%)
Query: 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113
+P G VIA + + A+ A A W + ER + + +LL A+ +E+
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVA 173
+ +T + G+P+ +A GE+ + + A+ +I ++ ++P+GV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 174 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 233
I PWN+P V PAL G V++K S TPL A +AG+P GV V+
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 234 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL 293
+ AL+ P++ ++FTGS A G+ + AAG KV LELGG P V DADL
Sbjct: 181 LSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL 239
Query: 294 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353
+ A + F NSGQ+C R+ V E IY+ F +AF VK K+GD GP
Sbjct: 240 DAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGP 299
Query: 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSL---GMTFYEPTVLSNVKSEMLVSREEV 410
+++ A + V + DA++KGA+ L+ G G + PTVL+NV M V REE
Sbjct: 300 VVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREET 359
Query: 411 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 470
FGPV ++ K++ EAI + ND+ GL A ++T ++ R + E LE G V +N
Sbjct: 360 FGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLD 419
Query: 471 EVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
+ GVK SG G S+ G D+ K
Sbjct: 420 PALAWTGVKDSGRGVTLSRLGYDQLTRPK 448
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 326 bits (837), Expect = e-106
Identities = 180/468 (38%), Positives = 259/468 (55%), Gaps = 19/468 (4%)
Query: 45 AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAAERSKGLRKWY 103
+ +EV P G V+ V K + D + AF A LT ERS L +
Sbjct: 13 VSRDRVIEVRYPYNGTVVGTVP----KASVDDVRRAFAIAAAYRPTLTRYERSAILDRAA 68
Query: 104 DLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP---- 159
LL A KEE+ LITLE G K+++ EV A + F A EA R G+I L
Sbjct: 69 ALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGK 128
Query: 160 DRRLFVLKQPV-GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 218
R++F ++P+ GV AITP+N P+ + K+ PA+A +VVKPSE TPL+AL A++
Sbjct: 129 ARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADI 188
Query: 219 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 278
+AG+PP ++ VV G+ +I D L+T+P V +TFTG A+GK + A A ++ LE
Sbjct: 189 LYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLE 246
Query: 279 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 338
LGGN P IV +DADL+ A + A+ ++NSGQ C R+LVQE + ++F + + +
Sbjct: 247 LGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRA 306
Query: 339 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 398
+ GD V G +I++AA E V +A+++GA++LLG R Y PTVL
Sbjct: 307 WRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDG---ALYAPTVLDR 363
Query: 399 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 458
V M + REE FGPV+P++ F ++AI ++N T GL++ + TN L R L+
Sbjct: 364 VDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQV 423
Query: 459 GLVGVNE--GLISTEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 503
G V V E G E+ PFGG+K SGLG +EG + M F +K L
Sbjct: 424 GTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 325 bits (835), Expect = e-106
Identities = 169/467 (36%), Positives = 257/467 (55%), Gaps = 4/467 (0%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
LI G+ + +G+ V+NPATGEVI ++ ++ A+ +A AF W + T R+
Sbjct: 5 LINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 155
+ L K D++ + + +L + GKPL E+ F+A A+ + G
Sbjct: 64 ECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAG 123
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
L + + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPLTAL
Sbjct: 124 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 183
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
AELA P GVVN++ G +GD L +VR ++ TGS A G+ +++ A ++K+
Sbjct: 184 AELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRT 242
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
+ELGG AP IVFDDAD++ V G F N+GQ C A R+ Q GIY+ + A
Sbjct: 243 HMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAA 302
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPT 394
V LK G E GPL + A LE+V VE+A + G KV+ GG + ++ PT
Sbjct: 303 VATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPT 362
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
+L+ K + + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++ R R+S
Sbjct: 363 LLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSA 422
Query: 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
L+YG VN + P GG K SG G++ S YG++++ ++++
Sbjct: 423 RLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHI 469
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-103
Identities = 173/464 (37%), Positives = 257/464 (55%), Gaps = 18/464 (3%)
Query: 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
G+ G+W G + +PA GE IA V ++ + I +A +AF W + A +R
Sbjct: 1 GVYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKR 58
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--YAEEAKR-VYGE 152
+ +R+ D L KE LG+L++LE GK L E +GEV + I+ +A R +YG
Sbjct: 59 GEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQ---EMIDICDFAVGLSRQLYGL 115
Query: 153 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212
IP+ P R+ P+GV G IT +NFP+A+ AL CG VV KPS TPLTA
Sbjct: 116 TIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTA 175
Query: 213 LAA----AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268
+A A + + G+P + ++V G A D+G+AL+ P+V ++FTGSTAVG+++
Sbjct: 176 IAVTKIVARVLEKNGLPGAIASLVCGGA-DVGEALVKDPRVPLVSFTGSTAVGRQVGQAV 234
Query: 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
A + LELGGN IV +DADL++AV L A +GQ C R++V E IY++
Sbjct: 235 AARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEV 294
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
+ KA K +++GD +G + GPL KAA++ +E+A S+G VL GG+
Sbjct: 295 LERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPG 354
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448
+ EPT++ S+ + +EE F P+ +L F T EEAI N+ GL++ IFT +L+
Sbjct: 355 NYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRN 413
Query: 449 --TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE-GS 488
W + + G+V VN G E+ FGG K++G GRE GS
Sbjct: 414 AFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-103
Identities = 171/453 (37%), Positives = 245/453 (54%), Gaps = 5/453 (1%)
Query: 55 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114
NPATGE + + + E AI+ A F + T A+R++ DLL A +++
Sbjct: 7 NPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVA 66
Query: 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD---RRLFVLKQPVG 171
L+TLE GK L A E AK +YAE A+ + + PA R +V QP+G
Sbjct: 67 ALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADE-PADAAAVGASRAYVRYQPLG 125
Query: 172 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231
V A+ PWNFPL + R PAL G ++K + P TAL A+L +AG P G
Sbjct: 126 VVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQT 185
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
++ + + +A+L P+V T TGS G+ + A A +KK LELGG+ P IV A
Sbjct: 186 LLVGSGAV-EAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSA 244
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL+ A A+ A+ +N+GQ+C+ A R +V +Y+ FA+ F + L+VGD
Sbjct: 245 DLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDV 304
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 411
GPL + ++VE V+DAV+ GA +L GG+R FY PTV++++ +M + EEVF
Sbjct: 305 GPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVF 364
Query: 412 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 471
GPVA L +EAI +AN T GL + +T + R + LE G V +N +S
Sbjct: 365 GPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYP 424
Query: 472 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
PFGGVK+SG GRE S +G+ EF IK V +G
Sbjct: 425 ELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457
|
Length = 457 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-102
Identities = 182/479 (37%), Positives = 264/479 (55%), Gaps = 20/479 (4%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAE 94
LI GK + G T NPAT EV+ + + AI++A AF+ WS+ TA
Sbjct: 4 LIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKP--------LKEAVGEVDYGAKFIEFYAEEA 146
R + LR+ D L AH EEL +L E G P L+ V ++ + A E Y
Sbjct: 62 RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESY--AW 119
Query: 147 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206
G P +P RR + ++ VGV GAITPWNFP + K+GPALA G TVV+KP+
Sbjct: 120 TTDLGVASPMGIPTRRT-LRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 207 FTPLTALAAAEL-ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265
TP A EL A PPGVVN+V + +G L P+V ++FTGSTA G+ +M
Sbjct: 179 DTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM 238
Query: 266 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 325
A AA T+KKV LELGG + IV DDADL A + A ++GQ C R++V Y
Sbjct: 239 ADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARY 298
Query: 326 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR-- 383
++ A + + ++K GD G V GP+I+ ++V+++++ AV++G + GG R
Sbjct: 299 DEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPA 358
Query: 384 -HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 442
G F EPTV++ + + V+REE+FGPV ++ +++A+ +AND+ GL+ +F
Sbjct: 359 DRDRGF-FVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVF 417
Query: 443 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
+ +R V+ + G V VN G+ + APFGG KQSG+GRE G +E+LE K +
Sbjct: 418 GADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 304 bits (782), Expect = 1e-98
Identities = 159/463 (34%), Positives = 253/463 (54%), Gaps = 15/463 (3%)
Query: 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113
++PATG+ + +V ++ +AI++A A W+K + AER K LR ++ ++EE+
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 114 GQLITLEQGKPLKEAV-GEVDYGAKFIEF---YAEEAKRVYGEIIPATLPDRRLFVLKQP 169
++ + GK + +A GE+ + I + + E+A R + +R V +P
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP 120
Query: 170 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA---LAAAELALQA-GIP 225
+GV GAI WN+P + + AL G +VVK SE ++ L+ L A G
Sbjct: 121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHD 180
Query: 226 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 285
P +V +V P+ +AL + P + ITF GS VGKK+MA AA ++ V LELGG P
Sbjct: 181 PDLVQLVTC-LPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPA 239
Query: 286 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345
IV DDADL+ + + F++SGQ C+ RV+V E IY+K + + V+ L+ G
Sbjct: 240 IVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPL 299
Query: 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKS 401
V G +I+ A +++E V DAV KGA++L GG+R+ ++ PT+L +V
Sbjct: 300 DGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTP 359
Query: 402 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 461
+M +++EEVFGPV ++ +EEA+ +AN T GL A +F +++R R++ LE G+V
Sbjct: 360 DMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMV 419
Query: 462 GVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
+N+ ++ V PFGGVK SG GR + G+ K V
Sbjct: 420 AINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVT 462
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 300 bits (769), Expect = 1e-96
Identities = 171/480 (35%), Positives = 255/480 (53%), Gaps = 29/480 (6%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
IGG+W+ G+ + P TG+V V ++ + A+ +A A +W K + AER+
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERAN 64
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKE--------AVGEVDYGAKFIEFYAEEAKRV 149
L K D + A+ E L T + GKP++E A+ Y A I A+E
Sbjct: 65 ILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIR--AQEGS-- 120
Query: 150 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209
EI T+ + +P+GV G I PWNFPL M T K+ PALA G VV+KP+E TP
Sbjct: 121 ISEIDENTVA----YHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTP 176
Query: 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269
+ L EL + +PPGVVNVV G + G L +S ++ K+ FTG T G+ +M A+
Sbjct: 177 ASILVLMEL-IGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235
Query: 270 GTVKKVSLELGGNAPCIVF------DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 323
+ V+LELGG +P I F DDA + A+ G + N G+ C C +R L+QE
Sbjct: 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQES 294
Query: 324 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383
IY++F + + VK +K G+ + G + LEK+ ++++ +GA+VL GG R
Sbjct: 295 IYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGER 354
Query: 384 HSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 439
+ LG +Y PT ++M + +EE+FGPV + FK EEEA+ +ANDT GL A
Sbjct: 355 NELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGA 413
Query: 440 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499
++T + +R+ ++ G V N + A FGG KQSG+GRE K +D + + K
Sbjct: 414 GVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTK 473
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 291 bits (746), Expect = 1e-92
Identities = 142/455 (31%), Positives = 234/455 (51%), Gaps = 13/455 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+IGG+ I D + NPA EV+ VS + + A+ +A +AF +W K + +R
Sbjct: 40 IIGGERITTED--KIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDR 97
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
++ L + ++ K E + E GKP EA + F+E+YA + ++
Sbjct: 98 ARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPV 157
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ P P+GV I+PWNFP A++ A+ G TV++KP+ TP+ A
Sbjct: 158 ESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKF 217
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---- 271
E+ +AG+P GVVN V G+ ++GD L+ P+ R ITFTGS VG ++ AA
Sbjct: 218 VEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQ 277
Query: 272 --VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 329
+K+V E+GG +V +DADL++A +A+ F SGQ C +R +V E +Y++
Sbjct: 278 IWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVL 337
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389
+ + K L VG+ + GP+IN+A+ +K+ +++E +G +++LGG
Sbjct: 338 EKVVELTKELTVGNP-EDNAYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKGY 395
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
F +PT+ ++V + + +EE+FGPV + K + A+ +AN+T GL + +NN +
Sbjct: 396 FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHL 455
Query: 450 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 482
+ G + N G V PFGG SG
Sbjct: 456 EKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 288 bits (739), Expect = 3e-92
Identities = 162/448 (36%), Positives = 244/448 (54%), Gaps = 4/448 (0%)
Query: 55 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114
NPATGE ++ + G + ++A+ A F W + R++ LR L A EE+
Sbjct: 13 NPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMA 72
Query: 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAG 174
Q+IT E GKP+ +A EV A ++YAE + + P + +++ + +P+G
Sbjct: 73 QMITREMGKPINQARAEVAKSANLCDWYAEHGPAML-KAEPTLVENQQAVIEYRPLGTIL 131
Query: 175 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 234
AI PWNFPL + R P L G ++K + A A++ AGIP GV +
Sbjct: 132 AIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWL-- 189
Query: 235 NAPDIG-DALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL 293
NA + G ++ ++ +T TGS G + A A +KK LELGG+ P IV +DADL
Sbjct: 190 NADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADL 249
Query: 294 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353
+AV A+A +++N+GQ C A R +++EGI F + F A LK+GD E GP
Sbjct: 250 ELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGP 309
Query: 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGP 413
+ +++ VE +++GA++LLGG + + +Y PTVL+NV EM REE+FGP
Sbjct: 310 MARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGP 369
Query: 414 VAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 473
VA + K E A+ +AND+ GL+A IFT + + +++ LE G V +N S
Sbjct: 370 VAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARV 429
Query: 474 PFGGVKQSGLGREGSKYGMDEFLEIKYV 501
FGGVK+SG GRE S +G+ EF I+ V
Sbjct: 430 AFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 270 bits (693), Expect = 2e-85
Identities = 162/453 (35%), Positives = 229/453 (50%), Gaps = 16/453 (3%)
Query: 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAF---NSWSKLTAAERSKGLRKWYDLLM 107
LEV NP + I V + A+ +A F N+W L A ER L + DL+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLME 58
Query: 108 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRL 163
+EL LI E GKPL +A EV +E A+E ++ G IP L R
Sbjct: 59 ERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118
Query: 164 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 223
F ++P+GV AI+ +N PL +I +V PA+A GC V+VKP+ TPL+ LA +L +AG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178
Query: 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG-AAGTVKKVSLELGGN 282
+P G V + + L+T P+V +F GS VG L + A GT + +LE GG
Sbjct: 179 LPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGT--RCALEHGGA 235
Query: 283 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 342
AP IV ADL+ + + F ++GQ CV RV V I + FA + A + L VG
Sbjct: 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVG 295
Query: 343 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 402
D GPLI +++VE +V +AV+ GA++L GG+R L T Y PTVL + +
Sbjct: 296 DPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKR--LSDTTYAPTVLLDPPRD 353
Query: 403 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 462
VS +E+FGPV + + +EAI AN A +FT +L + L+ V
Sbjct: 354 AKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVM 413
Query: 463 VNE-GLISTEVAPFGGVKQSGLGREGSKYGMDE 494
VN+ + PF G +QSG G G Y M +
Sbjct: 414 VNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHD 446
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 4e-85
Identities = 147/433 (33%), Positives = 226/433 (52%), Gaps = 8/433 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
IGGK+ + G + V NPAT EV V+ E A++SA + F +W + + A+R+
Sbjct: 4 WIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT 63
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
L ++ LL H++E+ +LIT E GK +A+G+V G + +E + GE
Sbjct: 64 SVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQ 123
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP-ALACGCTVVVKPSEFTPLTALAA 215
++ ++QP+GV ITP+NFP AMI + P A+ACG T V+KPSE P A+
Sbjct: 124 VATRVDVYSIRQPLGVCAGITPFNFP-AMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKL 182
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
AEL +AG P GV+NVV G+ + D LL P V+ ++F GST +G+ + + K+V
Sbjct: 183 AELFSEAGAPDGVLNVVHGDKEAV-DRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
G +V DAD + A + + A + +GQ C+ A V G +++ +
Sbjct: 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCM-AISAAVLVGAADEWVPEIRER 300
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----GMTFY 391
+ +++G G G GPLI A ++V + + ++GA+VLL GR + + +
Sbjct: 301 AEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWV 360
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
PT+L V M +EE+FGPV +L T EEAI + N + G IFT + R
Sbjct: 361 GPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARR 420
Query: 452 VSEALEYGLVGVN 464
+E G VGVN
Sbjct: 421 FQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 263 bits (674), Expect = 7e-83
Identities = 154/436 (35%), Positives = 223/436 (51%), Gaps = 28/436 (6%)
Query: 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131
+ A+++A AF W+ L+ ER+ LR++ +LL A+KEEL +LI+ E GKPL EA E
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 132 VDYGAKFIEF----YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 187
V A I+ Y E R P + R + +P GV P+NFP +
Sbjct: 61 VAAMAGKIDISIKAYHE---RTGERATP--MAQGRAVLRHRPHGVMAVFGPFNFPGHLPN 115
Query: 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 247
+ PAL G TVV KPSE TP A EL +AG+PPGV+N+V G + G+AL
Sbjct: 116 GHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHE 174
Query: 248 QVRKITFTGSTAVGKKLMAGAAGTVKKV-SLELGGNAPCIVFDDADLNVAVNGALAAKFR 306
+ + FTGS A G L AG K+ +LE+GGN P +V+D AD++ A + + F
Sbjct: 175 GIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFL 234
Query: 307 NSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 365
+GQ C CA R++V +G + F + +A K L++G E GPLI AA +
Sbjct: 235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLL 294
Query: 366 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTE 423
+D ++ G + LL R G F P ++ ++ V EE+FGP+ + +
Sbjct: 295 AQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYRYDDF 351
Query: 424 EEAIHMANDTNAGLAAYIFTNN---LQRTWRVSEALEYGLVGVNE---GLISTEVAPFGG 477
+EAI +AN T GL+A + +++ +R A G+V N G ST APFGG
Sbjct: 352 DEAIALANATRFGLSAGLLSDDEALFERFLARIRA---GIVNWNRPTTGASST--APFGG 406
Query: 478 VKQSGLGREGSKYGMD 493
V SG R + Y D
Sbjct: 407 VGLSGNHRPSAYYAAD 422
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 257 bits (660), Expect = 9e-80
Identities = 152/459 (33%), Positives = 223/459 (48%), Gaps = 19/459 (4%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+I G + G+ V +PA E I VS ++ A++ A AF WS ER
Sbjct: 36 IING--EETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEER 93
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
++ L K DLL A++ EL L E GK L +A EV F +YA +A+ ++ +
Sbjct: 94 AEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ GV I+PWNFPLA+ T ++ ALA G TV+ KP+E TPL A A
Sbjct: 154 PGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARA 213
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTV 272
EL +AG+P V+ +V G+ +IG+AL+ P++ + FTGST K + +A G +
Sbjct: 214 VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPI 273
Query: 273 KKVSLELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFAD 330
+ E GG NA IV A AV + + F ++GQ C A R+L +QE I E+F +
Sbjct: 274 LPLIAETGGKNA-MIVDSTALPEQAVKDVVQSAFGSAGQRC-SALRLLYLQEEIAERFIE 331
Query: 331 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390
A+ +LKVGD + GPLI+K A + + E + A ++ F
Sbjct: 332 MLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE-LMRGEAWLIAPAPLDDGNGYF 390
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQR 448
P ++ V L EVFGP+ ++ FK E +EAI N T GL I + + +R
Sbjct: 391 VAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRD-ER 447
Query: 449 TWR-VSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 484
E +E G + +N + PFGG SG G
Sbjct: 448 EIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 2e-78
Identities = 142/460 (30%), Positives = 225/460 (48%), Gaps = 17/460 (3%)
Query: 55 NPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113
NP EV+ VS + + A+ +A AF +W K ER+ L K ++ + E
Sbjct: 52 NPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILFKAAAIVRRRRHEF 111
Query: 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVA 173
L+ E GKP EA EV F+E+YA + + + + P GV
Sbjct: 112 SALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPVNSREGETNQYVYTPTGVT 171
Query: 174 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 233
I+PWNFP A++ + G VV+KP+E P+ A E+ +AG+P GVV V
Sbjct: 172 VVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVP 231
Query: 234 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT------VKKVSLELGGNAPCIV 287
G+ ++GD L+ P+ ITFTGS VG ++ AA +K+V E+GG IV
Sbjct: 232 GSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIV 291
Query: 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 347
+DAD+ +A A + F +GQ C +R +V E +Y++ + F + ++LKVG
Sbjct: 292 DEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSA 351
Query: 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 407
V GP+I++ + K+ ++E ++G +++ GG F PT+ ++V + +++
Sbjct: 352 DVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQ 410
Query: 408 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 467
EE+FGPV + +EA+ +AN+T GL + +NN R E G + N +
Sbjct: 411 EEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNI 470
Query: 468 ISTEVA--PFGGVKQSGLGREGSKYG----MDEFLEIKYV 501
V PFGG K SG SK G + F++ K V
Sbjct: 471 TGAIVGYQPFGGFKMSGT---DSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 7e-78
Identities = 141/415 (33%), Positives = 214/415 (51%), Gaps = 32/415 (7%)
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA--------VGEVDYGAKFIEFYAEEA 146
R L+ +L ++EE+ + + GKP EA +GE+D+ K ++ + +
Sbjct: 22 RKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKP- 80
Query: 147 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206
+RV +P L + +V+ +P+GV I PWN+PL + + A+A G TVV+KPSE
Sbjct: 81 RRVS---VPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSE 137
Query: 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 266
P T+ A+L + P V VV G ++ ALL P I FTGS AVGK +M
Sbjct: 138 LAPATSALLAKL-IPKYFDPEAVAVVEG-GVEVATALLAEP-FDHIFFTGSPAVGKIVME 194
Query: 267 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 326
AA + V+LELGG +PCIV DA+L VA KF N+GQTC+ + VLV E I +
Sbjct: 195 AAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKD 254
Query: 327 KFADAFSKAVKNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGR 382
+ + KA+K +GE + G +IN+ +++ + ++D KV++GG+
Sbjct: 255 ELIEELKKAIKEF-----YGEDPKESPDYGRIINERHFDRLASLLDD-----GKVVIGGQ 304
Query: 383 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 442
PT+L +V + + +EE+FGP+ P+L + +EAI N LA Y+F
Sbjct: 305 VDKEERYI-APTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLF 363
Query: 443 TNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 495
+ + RV G V VN+ L+ + PFGGV SG+G K G D F
Sbjct: 364 SEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTF 418
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 249 bits (636), Expect = 1e-76
Identities = 148/478 (30%), Positives = 235/478 (49%), Gaps = 18/478 (3%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
IGG+W+D + V A EV+ + E + A+ +A+ AF +W +R++
Sbjct: 23 IGGEWVDTKERMV-SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRAR 81
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG---EII 154
L K DLL + EL +T E GK EA+ +V FI +YA A R+ E++
Sbjct: 82 LLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVV 141
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P D F +G I+PWNFP+A+ T + +A G TV+ KP+E +
Sbjct: 142 PYPGEDNESFY--VGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYK 199
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA----- 269
E+ +AG PPGVV + G ++G L ++R I FTGS GKK+ AA
Sbjct: 200 VFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPG 259
Query: 270 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
K++ +E GG IV + AD + V G + + F GQ C A+R+++ +G YE
Sbjct: 260 QTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPV 319
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
+ K + L VG G GP+I+ KV +++E ++G +++LGG+R
Sbjct: 320 LERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEG 378
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNNL 446
F PTV+ V + +++EE+FGPV ++ +K ++ EA+ +AN T GL +++
Sbjct: 379 YFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKR 438
Query: 447 QRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGSKYGMDEFLEIKYV 501
+ G + +N + V PFGG K SG + G + + FLE+K V
Sbjct: 439 EHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 5e-74
Identities = 149/462 (32%), Positives = 227/462 (49%), Gaps = 21/462 (4%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
G+W + GK++ + NP+T + V +E A+ SA A +W+K +R+
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA 78
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE---- 152
+ L K +L HK + + + E KP K+AV EV I + AEE R+ GE
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL 138
Query: 153 ---IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209
P ++ K P+GV AI P+N+P+ + K+ PAL G VV+KP
Sbjct: 139 VSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198
Query: 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG---STAVGKKLMA 266
+ AL AG P G+++ V G +IGD L P V I+FTG A+ KK
Sbjct: 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKK--- 255
Query: 267 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 326
AG V + +ELGG CIV +DADL++A + F SGQ C VLV E + +
Sbjct: 256 --AGMV-PLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVAD 312
Query: 327 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 386
+ + V L VG + + P++++++ +E V DA KGA +R
Sbjct: 313 ALVEKVNAKVAKLTVGPPEDDCDIT-PVVSESSANFIEGLVMDAKEKGATFCQEWKREG- 370
Query: 387 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446
P +L NV+ +M ++ EE FGPV P++ + EE IH N +N GL +FT ++
Sbjct: 371 --NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 428
Query: 447 QRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREG 487
+ +S+A+E G V +N + PF G+K SG+G +G
Sbjct: 429 NKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQG 470
|
Length = 496 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 240 bits (614), Expect = 5e-74
Identities = 137/435 (31%), Positives = 203/435 (46%), Gaps = 49/435 (11%)
Query: 87 WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 146
TAAER L++ ++A +EE+ + + KP EVD E
Sbjct: 14 LRASTAAERIAKLKRLKKAILARREEIIAALAADFRKP----AAEVD---------LTEI 60
Query: 147 KRVYGEI-----------------IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189
V EI P L + + +P GV I+PWN+P +
Sbjct: 61 LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120
Query: 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 249
+ A+A G T ++KPSE TP T+ A++ +A V V G+A ++ ALL P
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDA-EVAQALLELP-F 177
Query: 250 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 309
I FTGS AVGK +MA AA + V+LELGG +P IV + ADL A KF N+G
Sbjct: 178 DHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAG 237
Query: 310 QTCVCANRVLVQEGIYEKFADAFSKAV-KNLKVGDGFGEGVVQGP----LINKAALEKVE 364
QTC+ + V V E + + F + + K G P ++N ++++
Sbjct: 238 QTCIAPDYVFVHESVKDAFVEHLKAEIEKFY----GKDAARKASPDLARIVNDRHFDRLK 293
Query: 365 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 424
++DAV+KGAKV GG + + PTVL+NV +M + +EE+FGPV P++ ++ +
Sbjct: 294 GLLDDAVAKGAKVEFGG-QFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLD 352
Query: 425 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA----PFGGVKQ 480
E I N LA Y+F+ + +V G V VN+ ++ PFGGV
Sbjct: 353 EVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVL--HFLNPNLPFGGVNN 410
Query: 481 SGLGREGSKYGMDEF 495
SG+G YG F
Sbjct: 411 SGIGSYHGVYGFKAF 425
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 2e-72
Identities = 148/456 (32%), Positives = 233/456 (51%), Gaps = 11/456 (2%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
+GG+W +G + NPA + IA V ++ ++ + + +A W ++ A +R +
Sbjct: 25 VGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGE 82
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 157
+R+ D L A + LG+L++LE GK L E +GEV +F ++++ G IIP+
Sbjct: 83 IVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSE 142
Query: 158 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA--- 214
P+ + + P+G+ G IT +NFP A++ AL CG VV K + TPL +A
Sbjct: 143 RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTK 202
Query: 215 -AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
AE+ + +P + G A +IG+A+ ++ ++FTGS+ VG +
Sbjct: 203 LVAEVLEKNNLPGAIFTSFCGGA-EIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFG 261
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
K LEL GN IV DDAD+ +AV L A +GQ C R+L+ E IY+ +
Sbjct: 262 KCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLL 321
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 393
K +K+GD +G + GPL + + E +E S+G K+L GG F +P
Sbjct: 322 TVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQP 381
Query: 394 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR--TWR 451
T++ + + V +EE+FGPV ++ FKT EEAI + N GL++ IFT N + W
Sbjct: 382 TIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWI 440
Query: 452 VSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 486
+ G+V VN E+ FGG K +G GRE
Sbjct: 441 GPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
|
Length = 508 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 7e-72
Identities = 151/464 (32%), Positives = 235/464 (50%), Gaps = 16/464 (3%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
I GKW G++ NPAT EV+ + + + A+++A AF +W++L+ ER
Sbjct: 3 IDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIA 61
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV-DYGAKF---IEFYAEEAKRVYGEI 153
++++ LL KE L ++I E GKPL E EV K I+ Y E
Sbjct: 62 VVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP- 120
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
+PD R + +P GV P+NFP + + PAL G TVV KPSE TP A
Sbjct: 121 ----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
+L +AG+P GV+N+V G A + G AL P + + FTGS+ G L AG +
Sbjct: 177 ETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235
Query: 274 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADA 331
K+ +LE+GGN P IV + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLAR 295
Query: 332 FSKAVKNLKVGDGFGEGV-VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390
+ + L VG E G +I+ A +++ ++ G K LL R+ G
Sbjct: 296 LVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAAL 355
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450
P ++ +V + EE FGP+ ++ + +EAI +AN+T GL+A + +++ +
Sbjct: 356 LTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD 414
Query: 451 RVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMD 493
R + G+V N+ L ++ APFGG+ SG R + Y D
Sbjct: 415 RFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD 458
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 3e-70
Identities = 152/471 (32%), Positives = 227/471 (48%), Gaps = 30/471 (6%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 97
I G WI A G+ E NP +GEV+ + + A+ +A AF +W++L+ ER
Sbjct: 5 INGDWI-AGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 98 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF----YAEEAKRVYGEI 153
+ ++ LL +KEEL ++I E GKPL EA EV I Y E E
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE- 122
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
+ D + +P GV P+NFP + + PAL G TVV KPSE TP A
Sbjct: 123 ----MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 178
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
+L QAG+P GV+N+V G + G AL P + + FTGS G L AG +
Sbjct: 179 LTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPE 237
Query: 274 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADA 331
K+ +LE+GGN P ++ + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 238 KILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLAR 297
Query: 332 FSKAVKNLKVGDGFGEGV-VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390
K L VG E G +I++ A + + ++ G K LL + G
Sbjct: 298 LVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGL 357
Query: 391 YEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN--- 445
P ++ + V + EE FGP+ ++ + +EAI +AN+T GL+A + +++
Sbjct: 358 LTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDRED 414
Query: 446 LQRTWRVSEALEYGLVGVNE---GLISTEVAPFGGVKQSGLGREGSKYGMD 493
+ A G+V N+ G S APFGGV SG R + Y D
Sbjct: 415 YDQFLLEIRA---GIVNWNKPLTGASSA--APFGGVGASGNHRPSAYYAAD 460
|
Length = 487 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 8e-70
Identities = 135/437 (30%), Positives = 210/437 (48%), Gaps = 35/437 (8%)
Query: 76 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV------ 129
S F S R L++ Y + ++E + + + + G+P E +
Sbjct: 10 IHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSG 69
Query: 130 --GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF---VLKQPVGVAGAITPWNFPLA 184
++ + K ++ +A++ K + + K+P+GV I PWN+P+
Sbjct: 70 VKNDILHMLKNLKKWAKDEK------VKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVL 123
Query: 185 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 244
+ + A+A GCTVV+KPSE TP TA AEL + + P VV G P+ ALL
Sbjct: 124 LALSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKYLDPDAFQVVQGGVPETT-ALL 181
Query: 245 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 304
KI +TGS VG+ + AA + V+LELGG +P IV +ADL +A L K
Sbjct: 182 EQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGK 240
Query: 305 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAAL 360
F N+GQ CV + VLV +Y++F + K + + G P ++N
Sbjct: 241 FGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEF-----YPGGANASPDYTRIVNPRHF 295
Query: 361 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 420
++++ ++ +KG KV++GG F PT++S+V + + EE+FGPV P++
Sbjct: 296 NRLKSLLDT--TKG-KVVIGGEM-DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKV 351
Query: 421 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGV 478
+EAI + N + LA YIFT++ + G V +N+ LI V APFGGV
Sbjct: 352 DDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGV 411
Query: 479 KQSGLGREGSKYGMDEF 495
SG G KYG D F
Sbjct: 412 GDSGYGAYHGKYGFDTF 428
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 8e-69
Identities = 133/420 (31%), Positives = 213/420 (50%), Gaps = 42/420 (10%)
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV--------GEVDYGAKFIEFYAEEA 146
R + L+K + ++ E+ + + + GK EA E++Y K ++ + +
Sbjct: 22 RIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKP- 80
Query: 147 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVK 203
KRV + P + ++ +P GV I PWN+P + + P A+A G T V+K
Sbjct: 81 KRVKTPL--LNFPSKS-YIYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLK 134
Query: 204 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 263
PSE TP T+ A++ ++ V VV G + LL I FTGS VGK
Sbjct: 135 PSELTPNTSKVIAKI-IEETFDEEYVAVVEGGV-EENQELLDQK-FDYIFFTGSVRVGKI 191
Query: 264 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 323
+M AA + V+LELGG +PCIV +DA+L +A + KF N+GQTCV + VLV E
Sbjct: 192 VMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHES 251
Query: 324 IYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLL 379
+ EKF + +K +GE ++ P +IN+ +++ +++ K++
Sbjct: 252 VKEKFIKELKEEIKKF-----YGEDPLESPDYGRIINEKHFDRLAGLLDN-----GKIVF 301
Query: 380 GGR--RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 437
GG R +L + EPT+L NV + V +EE+FGP+ P+L + T +EAI + L
Sbjct: 302 GGNTDRETL---YIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPL 358
Query: 438 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 495
A Y+F+ + + +V E L +G +N+ ++ + PFGGV SG+G KY D F
Sbjct: 359 ALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTF 418
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 2e-68
Identities = 130/364 (35%), Positives = 176/364 (48%), Gaps = 67/364 (18%)
Query: 165 VLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQ 221
V QP+GV G I PWN+PL + +GP ALA G V++KPSEFTP T+ AEL L
Sbjct: 97 VEYQPLGVVGIIVPWNYPL-YLA--LGPLIAALAAGNRVMIKPSEFTPRTSALLAEL-LA 152
Query: 222 AGIPPGVVNVVMGNAPDIGDA--------LLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
V VV G D+ A LL FTGSTAVG+ +M AA +
Sbjct: 153 EYFDEDEVAVVTG-GADVAAAFSSLPFDHLL---------FTGSTAVGRHVMRAAAENLT 202
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
V+LELGG +P I+ DADL A K N+GQTCV + VLV E E+F A
Sbjct: 203 PVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAK 262
Query: 334 KAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKV---------LLG 380
AV + + P +IN+ +++ +EDA +KGA+V
Sbjct: 263 AAVAKM-----YPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA 316
Query: 381 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 440
R+ PT++ NV +M V +EE+FGP+ P+L + + +EAI N LA Y
Sbjct: 317 TRK-------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALY 369
Query: 441 IFTNN-------LQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYG 491
F + L+RT S G V +N+ L ++ + PFGGV SG+G K G
Sbjct: 370 YFGEDKAEQDRVLRRT--HS-----GGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEG 422
Query: 492 MDEF 495
F
Sbjct: 423 FLTF 426
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 3e-67
Identities = 129/431 (29%), Positives = 205/431 (47%), Gaps = 22/431 (5%)
Query: 82 DAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA--------VGEVD 133
++F + R + LR +L +K+E + + + G+ E V E++
Sbjct: 18 ESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIE 77
Query: 134 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193
+ K ++ Y + K V P + +++ +P+GV I WN+PL + + A
Sbjct: 78 HLLKHLDEYLKPEK-VDTVG--VFGPGKS-YIIPEPLGVVLVIGAWNYPLNLTLIPLAGA 133
Query: 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 253
+A G TVV+KPSE +P T+ A+L L + P V V+ G LL P I
Sbjct: 134 IAAGNTVVLKPSELSPHTSKLMAKL-LTKYLDPSYVRVIEGGVEVT-TELLKEP-FDHIF 190
Query: 254 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 313
FTGS VGK +M AA + +LELGG +P IV +L VA KF N+GQTCV
Sbjct: 191 FTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCV 250
Query: 314 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 373
+ VLV I +KF +A +A+K G+ + ++N+ +++ ++D
Sbjct: 251 APDYVLVHRSIKDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIKD---H 306
Query: 374 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 433
G KV+ GG + + PT++ N + + +EE+FGP+ P+L ++ +E + N
Sbjct: 307 GGKVVYGG-EVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSR 365
Query: 434 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYG 491
LA Y F + + V E G V +N+ + + PFGGV SG+G KYG
Sbjct: 366 PKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYG 425
Query: 492 MDEFLEIKYVC 502
D F K V
Sbjct: 426 FDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 226 bits (576), Expect = 6e-67
Identities = 165/505 (32%), Positives = 257/505 (50%), Gaps = 16/505 (3%)
Query: 8 RVAFVGSRRIFASHLPSMQSYTPAFSRQ--GLIGGKWIDAYDGKTLEVHNPATGEVIANV 65
R F+ R + S P QS P + LIGG ++++ ++V NPAT EV++ V
Sbjct: 87 RPQFLALRSSWLSTSPE-QSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKV 145
Query: 66 SCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL 125
+E K A+S+A AF W R + + K+ +L+ + ++L IT EQGK L
Sbjct: 146 PLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTL 205
Query: 126 KEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAM 185
K++ G++ G + +E A GE +P + +++P+GV I P+NFP AM
Sbjct: 206 KDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFP-AM 264
Query: 186 ITRKVGP-ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 244
I + P A+ CG T ++KPSE P ++ AELA++AG+P GV+N+V G D +A+
Sbjct: 265 IPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAIC 323
Query: 245 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 304
+R ++F GS G + A AA K++ +G +V DA+++ +N LAA
Sbjct: 324 DDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAG 383
Query: 305 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 364
F +GQ C+ + V V G + + D + K LKV G GP+I+K A E++
Sbjct: 384 FGAAGQRCMALSTV-VFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERIC 442
Query: 365 TFVEDAVSKGAKVLLGGRR-----HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 419
++ V GAK+LL GR + G F PT+LS V +M +EE+FGPV +
Sbjct: 443 RLIQSGVDDGAKLLLDGRDIVVPGYEKG-NFIGPTILSGVTPDMECYKEEIFGPVLVCMQ 501
Query: 420 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGV 478
+ +EAI + N G A IFT++ + +E G +G+N + + F G
Sbjct: 502 ANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGN 561
Query: 479 KQSGLGREG--SKYGMDEFLEIKYV 501
K S G K G+D F +IK V
Sbjct: 562 KASFAGDLNFYGKAGVDFFTQIKLV 586
|
Length = 604 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 6e-63
Identities = 141/438 (32%), Positives = 215/438 (49%), Gaps = 36/438 (8%)
Query: 74 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 132
+A+ A +AF+S R + L +L +++E+ + + + KP EAV E+
Sbjct: 1 AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60
Query: 133 DYGAKFIEFYA-----EEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 187
I+ YA E K + ATL D +++ K+P+GV I WN+PL +
Sbjct: 61 LLVKNEIK-YAISNLPEWMKPEPVKKNLATLLDD-VYIYKEPLGVVLIIGAWNYPLQLTL 118
Query: 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP----PGVVNVVMGNAPDIGDAL 243
+ A+A G VV+KPSE +P TA AEL IP VV+G +
Sbjct: 119 VPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGGVEET--TE 171
Query: 244 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 303
L + I +TGST+VGK +M AA + V+LELGG +PC V D++VA
Sbjct: 172 LLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWG 231
Query: 304 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ----GPLINKAA 359
KF N+GQTC+ + VL + EKF +A K +K + +GE + G +IN
Sbjct: 232 KFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLK-----EFYGEDPKESPDYGRIINDRH 286
Query: 360 LEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 419
++++ + G KV +GG + + PTVL++VK V +EE+FGP+ P++
Sbjct: 287 FQRLKKLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVT 340
Query: 420 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGG 477
+EAI N LA Y+F+NN + ++ G V VN+ + + + PFGG
Sbjct: 341 VNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGG 400
Query: 478 VKQSGLGREGSKYGMDEF 495
V SG+G KY D F
Sbjct: 401 VGNSGMGAYHGKYSFDTF 418
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 1e-57
Identities = 145/478 (30%), Positives = 217/478 (45%), Gaps = 32/478 (6%)
Query: 37 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+IG + DG+ V NPA +++ V + AI SA AF +W+ A ER
Sbjct: 41 IIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKER 98
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
+ L + DLL H EL L E GK + A+ EV F +YA++ + V GE
Sbjct: 99 AAKLDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGEFS- 157
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ GV I+PWNFPLA+ T ++ ALA G TV+ KP+E T L A A
Sbjct: 158 -----------VESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL---MAGAAGTV 272
EL +AG P G + ++ G D+G AL + P++ + FTGST V + + +A
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADA 331
+ E GG IV A V L + F ++GQ C A RVL VQE + ++
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRC-SALRVLCVQEDVADRVLTM 325
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG---AKVLLGGRRHSLGM 388
A++ LKVG GP+I+ A + + +E A++ L R
Sbjct: 326 IQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHG 385
Query: 389 TFYEPTVLS-NVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNN 445
TF PT+ + +E+ EEVFGPV ++ +K E + + N T GL + +
Sbjct: 386 TFVAPTLFELDDIAEL---SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442
Query: 446 LQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGSKYGMDEFLEIKY 500
+ + G VN + V PFGG SG G + G + + +++Y
Sbjct: 443 ETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 199 bits (508), Expect = 4e-55
Identities = 149/465 (32%), Positives = 224/465 (48%), Gaps = 53/465 (11%)
Query: 44 DAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKW 102
DG T V NPA +V+ V+ ++ + A+++A AF WS AAER+ L +
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERA 621
Query: 103 YDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRR 162
DL+ AH EL L E GK L A+ EV F+ +YA +A+R L
Sbjct: 622 ADLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARR--------LLNGPG 673
Query: 163 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 222
+P+G I+PWNFPLA+ T ++ AL G TV+ KP+E TPL A A L +A
Sbjct: 674 H----KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA 729
Query: 223 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTVKKVSL-- 277
G+P + ++ G+ +G AL+ P++ + FTGST V + + +A +G V L
Sbjct: 730 GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG--PPVPLIA 787
Query: 278 ELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKA 335
E GG NA IV A V +A+ F ++GQ C A RVL +QE + ++ A
Sbjct: 788 ETGGQNA-MIVDSSALPEQVVADVIASAFDSAGQRC-SALRVLCLQEDVADRVLTMLKGA 845
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------- 388
+ L++GD + GP+I+ A +E +E + G V H L +
Sbjct: 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLV------HQLPLPAETEKG 899
Query: 389 TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE-----EAIHMANDTNAGLAAYI 441
TF PT+ + ++ S++ EVFGPV ++ FK +E + I N T GL +
Sbjct: 900 TFVAPTLIEIDSI-SDL---EREVFGPVLHVVRFKADELDRVIDDI---NATGYGLTFGL 952
Query: 442 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 484
+ + V+ + G + VN +I V PFGG SG G
Sbjct: 953 HSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 7e-54
Identities = 113/344 (32%), Positives = 170/344 (49%), Gaps = 17/344 (4%)
Query: 165 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 224
++ +P+GV I+ WNFP + V A+A G VV+KPSE P T+ A+L + +
Sbjct: 97 IVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYL 155
Query: 225 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 284
+ V+ G ALL + KI FTGS VG+ +MA AA + V+LELGG P
Sbjct: 156 DTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCP 213
Query: 285 CIVFDDADLNVAVNGALAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 343
IV DL VAV K+ N+GQ C+ + VLV+E DA ++
Sbjct: 214 VIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKF---- 269
Query: 344 GFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 399
FGE + ++N +++ ++D S K++ GG R + + EPT+L +
Sbjct: 270 -FGENPKESKDLSRIVNSHHFQRLSRLLDDP-SVADKIVHGGERDEKNL-YIEPTILLDP 326
Query: 400 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 459
+ + EE+FGP+ P++ K EE+I + N LAAY+FT N + R+ G
Sbjct: 327 PLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSG 386
Query: 460 LVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYV 501
V N+ ++ + PFGGV +SG G K+ D F K V
Sbjct: 387 GVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 8e-54
Identities = 150/466 (32%), Positives = 229/466 (49%), Gaps = 40/466 (8%)
Query: 43 IDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 101
I +G+ V +PA V+ V+ ++ + A+++A AF +WS+ ER+ L +
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILER 615
Query: 102 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP-- 159
DLL A++ EL L E GK L++A+ EV F +YA +A+R++G P LP
Sbjct: 616 AADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGA--PEKLPGP 673
Query: 160 ---DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
L + GV I+PWNFPLA+ +V ALA G TV+ KP+E TPL A A
Sbjct: 674 TGESNELRL--HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV 731
Query: 217 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTVK 273
+L +AGIP V+ ++ G+ +G AL P++ + FTGST + + +A G +
Sbjct: 732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPI- 790
Query: 274 KVSL--ELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFA 329
V L E GG NA IV A V+ + + FR++GQ C A RVL VQE I ++
Sbjct: 791 -VPLIAETGGQNA-MIVDSTALPEQVVDDVVTSAFRSAGQRC-SALRVLFVQEDIADRVI 847
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM- 388
+ A+ LKVGD GP+I+ A ++ +E + + A++L +
Sbjct: 848 EMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIE-RMKREARLLAQLPLPAGTEN 906
Query: 389 -TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE-----EAIHMANDTNAGLAAY 440
F PT + ++ EVFGP+ ++ +K + +AI N T GL
Sbjct: 907 GHFVAPTAFEIDSIS----QLEREVFGPILHVIRYKASDLDKVIDAI---NATGYGLTLG 959
Query: 441 IFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 484
I + + R+++ + G V VN I V PFGG SG G
Sbjct: 960 IHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 192 bits (491), Expect = 1e-53
Identities = 144/450 (32%), Positives = 217/450 (48%), Gaps = 29/450 (6%)
Query: 47 DGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDL 105
G+ V NPA +++ V+ + + A+ +A A WS AER+ L + DL
Sbjct: 125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADL 184
Query: 106 LMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFV 165
+ A +L L+ E GK L A+ EV F+ +YA +A+ +G +
Sbjct: 185 MEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------L 232
Query: 166 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 225
+P+G I+PWNFPLA+ T ++ ALA G +V+ KP+E TPL A A L +AG+P
Sbjct: 233 THRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVP 292
Query: 226 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL---MAGAAGTVKKVSLELGGN 282
PGV+ ++ G +G AL +V + FTGST V + + +A G + E GG
Sbjct: 293 PGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQ 352
Query: 283 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKV 341
IV A V LA+ F ++GQ C A RVL +QE + ++ A+ L+V
Sbjct: 353 NAMIVDSSALAEQVVADVLASAFDSAGQRC-SALRVLCLQEDVADRILTMLKGAMAELRV 411
Query: 342 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTV--LSN 398
G+ GP+I+ A +E ++ SKG V +SL TF PT+ L N
Sbjct: 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELEN 471
Query: 399 VKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 456
+ E+ + EVFGPV ++ +K + +E I N T GL + T + V+E
Sbjct: 472 L-DEL---QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERA 527
Query: 457 EYGLVGVNEGLISTEVA--PFGGVKQSGLG 484
G + VN ++ V PFGG SG G
Sbjct: 528 HAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 1e-45
Identities = 119/351 (33%), Positives = 173/351 (49%), Gaps = 28/351 (7%)
Query: 165 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 224
V+ +P+GV + WNFP+ + + A+A G VV+KPSE P T +A LA A I
Sbjct: 104 VVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPAT---SAFLA--ANI 158
Query: 225 P----PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 280
P V V+ G P +G+ LL KI FTGS VG+ +M AA + V+LELG
Sbjct: 159 PKYLDSKAVKVIEG-GPAVGEQLLQHKW-DKIFFTGSPRVGRIIMTAAAKHLTPVALELG 216
Query: 281 GNAPCIV--FDDA-DLNVAVNGALAAKFRN-SGQTCVCANRVLVQEGIYEKFADAFSKAV 336
G PCIV + D VAVN + K+ + +GQ C+ + VLV+E + +
Sbjct: 217 GKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTI 276
Query: 337 KNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
K FGE + ++NK +++ ++D A ++ GG + F E
Sbjct: 277 KKF-----FGENPRESKSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSIDEKKL-FIE 329
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L N + + EE+FGP+ P++ K E++I N LA Y FTNN + R+
Sbjct: 330 PTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389
Query: 453 SEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501
G V N+ +I + + PFGGV +SG GR KY D F K V
Sbjct: 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAV 440
|
Length = 484 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 2e-42
Identities = 140/457 (30%), Positives = 215/457 (47%), Gaps = 38/457 (8%)
Query: 47 DGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDL 105
G+ V NPA +++ V E + A+ SA +A W AER+ L + DL
Sbjct: 657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADL 716
Query: 106 LMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFV 165
+ A + L L+ E GK A+ EV F+ +YA + + + T
Sbjct: 717 MEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFDN---DT-------- 765
Query: 166 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 225
+P+G I+PWNFPLA+ T +V ALA G +V+ KP+E TPL A A + L+AG+P
Sbjct: 766 -HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVP 824
Query: 226 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV----KKVSL--EL 279
GVV ++ G +G AL+ +VR + FTGST V + L AG + + + L E
Sbjct: 825 AGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAET 884
Query: 280 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKN 338
GG IV A V LA+ F ++GQ C A RVL +Q+ + ++ A+
Sbjct: 885 GGQNAMIVDSSALTEQVVADVLASAFDSAGQRC-SALRVLCLQDDVADRTLKMLRGAMAE 943
Query: 339 LKVG--DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---TFYEP 393
++G D + GP+I+ A +E ++ +KG V R +S TF P
Sbjct: 944 CRMGNPDRLSTDI--GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPP 1001
Query: 394 TV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNNLQRT 449
T+ L + E+ + EVFGPV ++ + + E I N + GL + T +
Sbjct: 1002 TLIELDSF-DEL---KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETI 1057
Query: 450 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 484
+V+ + G + VN ++ V PFGG SG G
Sbjct: 1058 AQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
|
Length = 1318 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 2e-42
Identities = 130/480 (27%), Positives = 223/480 (46%), Gaps = 53/480 (11%)
Query: 37 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+IGGK + G T + P V+A + AI +A +A W+++ +R
Sbjct: 36 VIGGKEV--RTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDR 93
Query: 96 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDYGAK---FIEFYAEEAKRVYG 151
+ K DLL ++ EL L QGK + +A E+D + F+ F + A+ +Y
Sbjct: 94 AAIFLKAADLLSGKYRYELNAATMLGQGKNVWQA--EIDAACELIDFLRFNVKYAEELYA 151
Query: 152 EIIPATLPDRRLFVLKQPV-GVAGAITPWNF-------PLAMITRKVGPALACGCTVVVK 203
+ ++ + +P+ G A++P+NF A PAL G V+ K
Sbjct: 152 QQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGA-------PALM-GNVVLWK 203
Query: 204 PSEFTPLTALAAAELALQ----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 259
PS+ TA+ + L + AG+PPGV+N V G+ P +GD +L SP + + FTGST
Sbjct: 204 PSD----TAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTP 259
Query: 260 VGKKLMAGAAG------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 313
K L T ++ E GG +V AD++ V + F GQ C
Sbjct: 260 TFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCS 319
Query: 314 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA-VS 372
A+R V E ++ + + + +K +K+GD G +I++ A ++++ +++ A
Sbjct: 320 AASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSD 379
Query: 373 KGAKVLLGGR-RHSLGMTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTE--EEAI 427
A+++ GG+ S+G F EPTV+ ++ K +++ EE+FGPV + + EE +
Sbjct: 380 PEAEIIAGGKCDDSVGY-FVEPTVIETTDPKHKLMT--EEIFGPVLTVYVYPDSDFEETL 436
Query: 428 HMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFGGVKQSG 482
+ + T+ L IF + + ++AL G +N+ V PFGG + SG
Sbjct: 437 ELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 8e-42
Identities = 129/467 (27%), Positives = 212/467 (45%), Gaps = 26/467 (5%)
Query: 37 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+IGG+ + G+ + +P V+A + + A+ +A DA WS L +R
Sbjct: 35 VIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDR 93
Query: 96 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDYGAK---FIEFYAEEAKRVYG 151
+ K DLL ++ E+ L Q K + +A E+D A+ F F A+ A+ +Y
Sbjct: 94 AAIFLKAADLLSGPYRAEILAATMLGQSKTVYQA--EIDAVAELIDFFRFNAKYARELYE 151
Query: 152 EIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210
+ P + P +P+ G AI+P+NF PAL G TV+ KPS+ L
Sbjct: 152 QQ-PISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAML 209
Query: 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270
+ + +AG+PPGV+N V G+ P + D +L P + I FTGST K L A
Sbjct: 210 SNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQ 269
Query: 271 TVKK------VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 324
+ + + E GG +V AD+ V+G + F GQ C +R+ V +
Sbjct: 270 NLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329
Query: 325 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA--KVLLGGR 382
+ +F + +KVGD G G +I++ + K+ ++E A S + +L GG+
Sbjct: 330 WPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGK 389
Query: 383 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF---KTEEEAIHMANDTNAGLAA 439
F EPTV+ + + + +EE+FGPV + + K +E + + T+ GL
Sbjct: 390 YDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTG 449
Query: 440 YIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFGGVKQSG 482
+F + + L + G +N+ V PFGG + SG
Sbjct: 450 AVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 2e-40
Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 165 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 224
++ +P+GV I+ WN+P + V A++ G VV+KPSE P ++ A+L L+ +
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYL 166
Query: 225 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 284
V VV G + L + KI +TGS+ +G+ +MA AA + V LELGG +P
Sbjct: 167 DSSAVRVVEGAVTET--TALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSP 224
Query: 285 CIVFDDADLNVAVNGALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 343
+V D DL V V +A K+ N+GQ C+ + +L + K DA K ++ G
Sbjct: 225 VVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETF-YGK 283
Query: 344 GFGEGVVQGPLINKAALEKVETFV-EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 402
E ++N +++ + E VS K++ GG + + PT+L +V +
Sbjct: 284 NPMESKDMSRIVNSTHFDRLSKLLDEKEVSD--KIVYGGEKDRENLKI-APTILLDVPLD 340
Query: 403 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 462
L+ EE+FGP+ P+L EE+ + LAAY+FT+N + R + + G +
Sbjct: 341 SLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400
Query: 463 VNEGLISTEVA----PFGGVKQSGLGREGSKYGMDEFLEIKYV 501
VN+ I+ +A PFGGV +SG+G K+ D F K V
Sbjct: 401 VND--IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 7e-32
Identities = 123/451 (27%), Positives = 193/451 (42%), Gaps = 59/451 (13%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAA 93
Q + G+W A G +H+ TGEV+A VS G + A++ A + + LT
Sbjct: 2 QSYVAGQWH-AGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFH 59
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----- 148
ER+ L+ LM KE+L ++ G +++ ++D G + YA +R
Sbjct: 60 ERAAMLKALAKYLMERKEDLYA-LSAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNA 118
Query: 149 ---VYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 201
V G++ P T + + ++ GVA I +NFP+ + K PAL G V+
Sbjct: 119 HFLVEGDVEPLSKDGTFVGQHILTPRR--GVAVHINAFNFPVWGMLEKFAPALLAGVPVI 176
Query: 202 VKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 260
VKP+ T A + +++G+ P G + ++ G+ D+ D L V + FTGS A
Sbjct: 177 VKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL-GEQDV--VAFTGSAAT 233
Query: 261 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD-LNVAVNGALAAK------------FRN 307
KL A + + NA +AD LN A+ G A R
Sbjct: 234 AAKLRAHPNIVARSIRF----NA------EADSLNAAILGPDATPGTPEFDLFVKEVARE 283
Query: 308 ----SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 363
+GQ C R V E + +A + + VGD EGV GPL+++ E V
Sbjct: 284 MTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDV 343
Query: 364 ETFVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTVL--SNVKSEMLVSREEVFGPV 414
V + A+V+ GG + F+ PT+L + + V E FGPV
Sbjct: 344 RAAVA-TLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPV 402
Query: 415 APLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445
A L+ + + EAI +A L A + TN+
Sbjct: 403 ATLMPYDSLAEAIELAARGRGSLVASVVTND 433
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 5e-29
Identities = 113/431 (26%), Positives = 175/431 (40%), Gaps = 31/431 (7%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAA 93
Q + G+W G+ + V + +TGEV+A V+ G + A++ A + + LT
Sbjct: 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTS-EGLDVAAAVAWAREVGGPALRALTFH 59
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----- 148
ER++ L+ L KE L L G ++ ++D G + Y+ +R
Sbjct: 60 ERARMLKALAQYLSERKEALYAL-AATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDA 118
Query: 149 ---VYGEIIPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 201
E P L F +L GVA I +NFP+ + K PA G +
Sbjct: 119 NLIPEDEFEP--LSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTL 176
Query: 202 VKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 260
KP+ T A A +++G+ P G + ++ G+A D+ D L V FTGS A
Sbjct: 177 AKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGDLLDHLDHRDVV---AFTGSAAT 233
Query: 261 GKKLMA-------GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 313
+L A G + SL D+ + ++ + +GQ C
Sbjct: 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCT 293
Query: 314 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 373
RV+V + + E A + + +GD EGV GPL++ VE V ++
Sbjct: 294 AIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAA 353
Query: 374 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVFGPVAPLLCFKTEEEAIHMAND 432
GA+V LGG G F+ PT+L V E FGPVA + EA +A
Sbjct: 354 GAEVRLGGPGRLDG-AFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAAR 412
Query: 433 TNAGLAAYIFT 443
L A + T
Sbjct: 413 GGGSLVATLAT 423
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 5e-27
Identities = 117/449 (26%), Positives = 186/449 (41%), Gaps = 62/449 (13%)
Query: 38 IGGKWID-AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF------NSWSKL 90
+ G+W + G L +P TGE + VS G +++AF AF + L
Sbjct: 9 VAGRWQAGSGAGTPL--FDPVTGEELVRVSATGLD-----LAAAF-AFAREQGGAALRAL 60
Query: 91 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 150
T A+R+ L +L A+++ + T G ++ ++D G + +YA+
Sbjct: 61 TYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAK------ 114
Query: 151 GEIIPATLPDRRLFVLKQPV------------------GVAGAITPWNFPLAMITRKVGP 192
+ A L D RL + V GVA I +NFP + K P
Sbjct: 115 ---LGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAP 171
Query: 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRK 251
AL G V+VKP+ T + + AGI P G ++VV G++ + D L V
Sbjct: 172 ALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVV-- 229
Query: 252 ITFTGSTAVGKKLMAGAAGTVKKV-------SLELGGNAPCIVFDDADLNVAVNGALAAK 304
+FTGS L + A + V SL P ++ V +
Sbjct: 230 -SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREM 288
Query: 305 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 364
SGQ C R+ V E +Y+ A+A + + VG+ +GV GPL+++A L V
Sbjct: 289 TVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVR 348
Query: 365 TFVEDAVSKGAKVLLGGRRHSL------GMTFYEPTVL--SNVKSEMLVSREEVFGPVAP 416
+ A+ A+VL G +L PT+L S+ + V EVFGPVA
Sbjct: 349 AGLA-ALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVAT 407
Query: 417 LLCFKTEEEAIHMANDTNAGLAAYIFTNN 445
LL ++ A+ +A L A +++++
Sbjct: 408 LLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 3e-26
Identities = 106/372 (28%), Positives = 147/372 (39%), Gaps = 51/372 (13%)
Query: 76 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 135
A ++A AF S+ L+ A R+ L D + A +EL E G P GE+
Sbjct: 4 AAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRT 63
Query: 136 AKFIEFYAEEAKR--VYGEII--------PATLPD-RRLFVLKQPVGVAGAITPWNFPLA 184
+ +A+ + I P PD RR+ V PV V GA NFPLA
Sbjct: 64 TGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGAS---NFPLA 120
Query: 185 MITRKVG----PALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 236
G ALA GC VVVK P T+ A A G+P GV +++ G
Sbjct: 121 FSV--AGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGG 178
Query: 237 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDADLN 294
++G AL+ P ++ + FTGS G+ L AA ELG P + A
Sbjct: 179 REVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGA--- 235
Query: 295 VAVNG-ALAAKFRNS-----GQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGE 347
+A G A+A F S GQ C VLV G + F A ++A+
Sbjct: 236 LAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTP 295
Query: 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS- 406
G+ + AL G +VL GG G PT+ V + ++
Sbjct: 296 GIAEAYRQGVEALAAA---------PGVRVLAGGAAAEGGNQ-AAPTLFK-VDAAAFLAD 344
Query: 407 ---REEVFGPVA 415
+EEVFGP +
Sbjct: 345 PALQEEVFGPAS 356
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 5e-23
Identities = 92/418 (22%), Positives = 154/418 (36%), Gaps = 32/418 (7%)
Query: 76 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 135
A+ +A + + +L +R+ L + L A ++ L GK A +
Sbjct: 4 ALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFA-ENICGD 62
Query: 136 AKFIEFYAE--EAKRVYGEIIPATLPDRRLFVLKQ--PVGVAGAITPWNFPLAMITRKVG 191
+ A + R+ E + P G I +NFPL + ++
Sbjct: 63 QVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122
Query: 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVR 250
ALA G V+VKP + L AG+ PP V ++ G+ ALL P +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDG-KTMQALLLHPNPK 181
Query: 251 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK-FRNSG 309
+ FTGS+ V +KL A ++ LEL G ++ DA V SG
Sbjct: 182 MVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSG 239
Query: 310 QTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 368
Q C + + V E + + K+ D ++ GP+ L +
Sbjct: 240 QKCTAQSMLFVPENWSKTPLVEKLKALLARRKLED-----LLLGPVQTFTTLAMIAHMEN 294
Query: 369 DAVSKGAKVLLGGRRHSL--GMTFYEPTVLS--------NVKSEMLVSREEVFGPVAPLL 418
G+ +L G+ + Y V S +K+ LV+ EE+FGP A ++
Sbjct: 295 LL---GSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVT-EEIFGPFAIVV 350
Query: 419 CFKTEEEA--IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 474
+K ++ A + + + L A I++N+ + L T VAP
Sbjct: 351 EYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAP 408
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 99.2 bits (248), Expect = 5e-22
Identities = 125/463 (26%), Positives = 197/463 (42%), Gaps = 64/463 (13%)
Query: 21 HLPSMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA 80
+ +QSY + G+W G+ +H+ TGE +A VS G + A++ A
Sbjct: 1 MMQKLQSY---------VAGRWQTG-QGEGRPLHDAVTGEPVARVSS-EGLDFAAALAYA 49
Query: 81 FD-AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFI 139
+ + LT ER+ L+ L+ KEEL L + + G +++ +++ G +
Sbjct: 50 REVGGPALRALTFHERAAMLKALAKYLLERKEELYAL-SAQTGATRRDSWIDIEGGIGTL 108
Query: 140 EFYAEEAKR--------VYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 187
YA + +R V GE+ P T R + + GVA I +NFP+ +
Sbjct: 109 FTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLE--GVAVHINAFNFPVWGML 166
Query: 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTS 246
K+ PA G +VKP+ T A L +++G+ P G + ++ G+A D+ D L
Sbjct: 167 EKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGDLLDH-LDG 225
Query: 247 PQVRKITFTGSTAVGKKLMAGAAGTVKKV-------SLELGGNAPCIVFDDA-------D 292
V +TFTGS A +KL A V SL NA I+ DA D
Sbjct: 226 QDV--VTFTGSAATAQKLRAHPNVVANSVPFTAEADSL----NA-AILGPDATPGTPEFD 278
Query: 293 LNV-AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
L V V + K +GQ C R +V + + +A + + VGD EGV
Sbjct: 279 LFVKEVVREMTVK---AGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRM 335
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTVLS--NVKSE 402
G L + E V V A+ A+++ GG + F+ PT+L +
Sbjct: 336 GALASLEQREDVREKV-AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEA 394
Query: 403 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445
V E FGPV+ L+ + +EAI +A L A + T +
Sbjct: 395 PAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTAD 437
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 5e-10
Identities = 108/429 (25%), Positives = 168/429 (39%), Gaps = 68/429 (15%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAE 94
L+ GKW A + + +P G+ +V E + + S S + L E
Sbjct: 2 LVAGKWKGASN--YTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 95 RSKGLRKWYDLLMAHKEELGQ---------LITLEQGKPLKEAVGEVDYGAKFIEFYAEE 145
R + D+ EL + LI K +A+GEV KF+E +A +
Sbjct: 60 R---YLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGD 116
Query: 146 AKRVY--GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 203
R +P ++ + P G ITP+NFPL + ++ AL G ++K
Sbjct: 117 QVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLK 176
Query: 204 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 263
+ L G+P V+++ + P + LL + R FTGS+ V ++
Sbjct: 177 VDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEA-NPRMTLFTGSSKVAER 235
Query: 264 LMAGAAGTVKKVSLELGGN-----APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 318
L A KV LE G P + D A A SGQ C A +
Sbjct: 236 L---ALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYAC----SGQKC-SAQSI 287
Query: 319 L------VQEGIYEKFAD-AFSKAVKNLKVGDGFGEGVVQGPLI---NKAALEKVETFVE 368
L VQ GI +K A + +++L + GP++ + L+ V+ +
Sbjct: 288 LFAHENWVQAGILDKLKALAEQRKLEDLTI----------GPVLTWTTERILDHVDKLLA 337
Query: 369 DAVSKGAKVLLGGR---RHSLGMTF--YEPTV----LSNVKSEM---LVSREEVFGPVAP 416
GAKVL GG+ HS+ + YEPT L + E LV+ EVFGP
Sbjct: 338 ---IPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTT-EVFGPFQV 393
Query: 417 LLCFKTEEE 425
+ +K E+
Sbjct: 394 VTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 59.4 bits (145), Expect = 2e-09
Identities = 75/311 (24%), Positives = 121/311 (38%), Gaps = 69/311 (22%)
Query: 168 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAG 223
+PVGV A+ P P + K AL ++ P ++ AA++ A+ AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 224 IPPGVVNVVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 280
P G++ + P I L+ P V I TG M AA + K ++ +G
Sbjct: 154 APEGLIQWI--EEPSIELTQELMKHPDVDLILATGGPG-----MVKAAYSSGKPAIGVGP 206
Query: 281 GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCA--NRVLVQEGIYEKFADAFSKAVK 337
GN P + + AD+ AV + +K F N +CA V+V + IY++ +
Sbjct: 207 GNVPAYIDETADIKRAVKDIILSKTFDNG---TICASEQSVIVDDEIYDEVRAELKR--- 260
Query: 338 NLKVGDGFGEGVVQGPLINKAALEKVETFVE--------DAVSKGAKVLLGGRRHSLGMT 389
G +N+ EK+E + D V K A+ + G+
Sbjct: 261 ---------RGAY---FLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAEL----AGIE 304
Query: 390 FYEPTVLSNVKSEMLVSREEVFGP--------VAPLLCF---KTEEEAIHMAND--TNAG 436
E T + LV+ E GP ++P+L F + EEA+ A + G
Sbjct: 305 VPEDTKV-------LVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGG 357
Query: 437 LA--AYIFTNN 445
A I +N+
Sbjct: 358 AGHTAVIHSND 368
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 7e-09
Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 28/257 (10%)
Query: 193 ALACGCTVVVKPSEFTPL----TALAAAELALQAGIPPGVVNVVMGNAPD-IGDALLTSP 247
+LA G V+VKP L T A E+ +AG P +V + + I L T P
Sbjct: 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRP 276
Query: 248 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR- 306
+VR I FTGS A G L A A +V E G +V D D A+ LA
Sbjct: 277 EVRIIDFTGSNAFGDWLEANARQ--AQVYTEKAGVNTVVV-DSTDDLKAMLRNLAFSLSL 333
Query: 307 NSGQTCVCANRVLV-QEGI--------YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 357
SGQ C + V ++GI +++ A + A+ L + D + G + +
Sbjct: 334 YSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSP 392
Query: 358 AALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGP 413
L ++ + +VLL + P +L S+ EE FGP
Sbjct: 393 DTLARIA-----EARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGP 447
Query: 414 VAPLLCFKTEEEAIHMA 430
+A ++ + + +I +A
Sbjct: 448 IAFVVATDSTDHSIELA 464
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-09
Identities = 96/401 (23%), Positives = 150/401 (37%), Gaps = 64/401 (15%)
Query: 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG------KPLK-E 127
DA+++A A + K T A+R K + + L+++ EEL ++ E G K K
Sbjct: 8 DAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKIAKNH 67
Query: 128 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQ-PVGVAGAITPWNFPLAMI 186
E G E A G D L +++ P GV GAITP P I
Sbjct: 68 LAAEKTPG---TEDLTTTA--WSG--------DNGLTLVEYAPFGVIGAITPSTNPTETI 114
Query: 187 TRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDA 242
LA G VV P + A EL +AG P +V V + +
Sbjct: 115 INNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNE 174
Query: 243 LLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL-NVAVNGAL 301
L+ P + + TG AV K ++ + KK GN P +V + AD+ A +
Sbjct: 175 LMAHPDINLLVVTGGPAVVKAALS----SGKKAIGAGAGNPPVVVDETADIEKAARDIVQ 230
Query: 302 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 361
A F N+ C+ V+ + + + A + G L ++ A +
Sbjct: 231 GASFDNN-LPCIAEKEVIAVDSVADYLIAAMQR------------NGAYV--LNDEQAEQ 275
Query: 362 KVETFVEDA---------VSKGAKVLLGGRRHSLGMTFYEPTVLSNV---KSEMLVSREE 409
+E + V K A +L + G+ L V K V EE
Sbjct: 276 LLEVVLLTNKGATPNKKWVGKDASKILK----AAGIEVPADIRLIIVETDKDHPFVV-EE 330
Query: 410 VFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQR 448
P+ P++ K +EAI +A + G A I + N++
Sbjct: 331 QMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 103/429 (24%), Positives = 163/429 (37%), Gaps = 75/429 (17%)
Query: 52 EVHNPATGEVIANVSCMGGKET-KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 110
E+ + T A V MG + DA+++A A + + + A R + + + L+ H
Sbjct: 16 EMLSSQTVSPPAAVGEMGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHA 75
Query: 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--EIIPATLPDRRLFVLKQ 168
EEL +L E G +G V+ K + A A++ G ++ L L +
Sbjct: 76 EELAELAVEETG------MGRVE--DKIAKNVAA-AEKTPGVEDLTTEALTGDNGLTLIE 126
Query: 169 --PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQA 222
P GV GA+TP P I LA G +VV P +L A EL + A
Sbjct: 127 YAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAA 186
Query: 223 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGN 282
G P +V V + L+ P + + TG AV K M + KK GN
Sbjct: 187 GGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGN 242
Query: 283 APCIVFDDADLNVA----VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 338
P +V + AD+ A V G A F N+ C+ V+V + + ++ K
Sbjct: 243 PPVVVDETADIEKAARDIVKG---ASFDNN-LPCIAEKEVIVVDSVADELMRLMEK---- 294
Query: 339 LKVGDGFGEGVVQGPLINKAALEKVETFV--------EDAVSKGAKVLLGGRRHSLGMTF 390
G V + EK++ V + V K A +L G+
Sbjct: 295 --------NGAVL---LTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA----AGINV 339
Query: 391 YEPTVL---------SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AA 439
+ T L V +E+++ PV P++ K +EAI +A G A
Sbjct: 340 PKDTRLLIVETDANHPFVVTELMM-------PVLPVVRVKDVDEAIALAVKLEHGNRHTA 392
Query: 440 YIFTNNLQR 448
+ + N+
Sbjct: 393 IMHSRNVDN 401
|
Length = 465 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 72/266 (27%), Positives = 108/266 (40%), Gaps = 28/266 (10%)
Query: 169 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT----PLTALAAAELALQAGI 224
P G+A I FP + +LA G V+VKP LT A E+ +AG
Sbjct: 193 PRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGF 252
Query: 225 PPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 283
P +V + + + L T P VR I FTGS A G+ L A +V E G
Sbjct: 253 DPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQA--QVYTEKAGVN 310
Query: 284 PCIVFDDADLN-VAVNGALAAKFRNSGQTCVCANRVLV-QEGI--------YEKFADAFS 333
I+ D + N A + SGQ C +LV ++GI Y++ A +
Sbjct: 311 TVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLA 369
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMT 389
A+ L +GD V G + + L + + +A + G +VLL + G
Sbjct: 370 TAIDGL-LGDPARATAVLGAIQSPDTLAR----IAEARALG-EVLLASTKIEHPEFPGAR 423
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVA 415
P +L ++ +E FGP+A
Sbjct: 424 VRTPLLLKCDAADEAAYMQERFGPIA 449
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 4e-07
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 24/269 (8%)
Query: 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 134
DA+++A A S + R + + +L +L E G E
Sbjct: 3 DAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVED------ 56
Query: 135 GAKFIE--FYAEEAKRVY-GEIIPATLPDRRLF---VLKQPVGVAGAITPWNFPLAMITR 188
K I+ F AE VY E L ++ +P+GV +ITP P + +
Sbjct: 57 --KVIKNHFAAEYIYNVYKDEKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIF 114
Query: 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG--NAPDI--GDALL 244
K +L +++ P AA L LQA + G ++G + P I L+
Sbjct: 115 KSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLM 174
Query: 245 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAA 303
P + + TG AV K AA + K ++ +G GN P ++ + AD+ AV + +
Sbjct: 175 KFPGIGLLLATGGPAVVK-----AAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229
Query: 304 KFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K ++G C V+V + +Y++ F
Sbjct: 230 KTFDNGVICASEQSVIVVDSVYDEVMRLF 258
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 50/270 (18%), Positives = 105/270 (38%), Gaps = 14/270 (5%)
Query: 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG-KPLKEAV 129
++ ++ I SA A + +T + K ++ D + +L ++ E G ++ V
Sbjct: 8 QQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKV 67
Query: 130 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189
+ + A + ++ K + I+ + + + PVGV + P P + K
Sbjct: 68 IKNVFAATIVYDSIKDMKTI--GILSEDKEKK-VIEIAVPVGVVAGLIPSTNPTSTAIYK 124
Query: 190 VGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLT 245
++ +V P + +L A +AG P G + + + + L+
Sbjct: 125 TLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMK 184
Query: 246 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAAK 304
+ I TG A M AA + ++ +G GN P + A++ AV + +K
Sbjct: 185 NKDTSLILATGGEA-----MVKAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSK 239
Query: 305 FRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
++G C ++V+E + + K
Sbjct: 240 TFDNGTICASEQSIIVEECNKDAVVEELKK 269
|
Length = 488 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 9e-05
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 169 PVGVAGAITPWNFP---------LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL- 218
PVGV ITP P +A+ TR ++ +++AAA++
Sbjct: 108 PVGVIAGITPTTNPTSTAIFKALIALKTR---------NPIIFSFHPRAQKSSIAAAKIV 158
Query: 219 ---ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
A+ AG P ++ + + ++ +AL+ P + I TG M AA + K
Sbjct: 159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP 213
Query: 276 SLELG-GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+L +G GN P + AD+ AVN L +K F N G C V+V + IY++ + F+
Sbjct: 214 ALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDN-GMICASEQAVIVDDEIYDEVKEEFA 272
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367
+NK L+K+E F+
Sbjct: 273 SH---------------GAYFLNKKELKKLEKFI 291
|
Length = 862 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 7e-04
Identities = 46/192 (23%), Positives = 68/192 (35%), Gaps = 18/192 (9%)
Query: 148 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 207
+ ++P +V P+GV I P PL+ IT +A + +P
Sbjct: 82 HIQDVLLPDNG---ETYVRAFPIGVTMHILPSTNPLSGIT-SALRGIATRNQCIFRPHPS 137
Query: 208 TPLTALAAAELALQAGIPPGVVN--VVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKK 263
P T A A L QA V+ P + LL+ P++ I TG
Sbjct: 138 APFTNRALA-LLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDA 196
Query: 264 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR-----NSGQTCVCANRV 318
A V GN+P +V + AD A +KF S Q + V
Sbjct: 197 --AVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQNACASEQNLYVVDDV 254
Query: 319 LVQEGIYEKFAD 330
L + +YE+F
Sbjct: 255 L--DPLYEEFKL 264
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 509 | |||
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.94 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.81 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.57 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.21 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.48 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.75 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.51 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.22 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.2 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.07 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.06 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.01 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.87 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.57 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.38 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 87.06 | |
| PF12340 | 229 | DUF3638: Protein of unknown function (DUF3638); In | 81.99 |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-115 Score=834.18 Aligned_cols=475 Identities=66% Similarity=1.052 Sum_probs=463.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.+.||+|+|+++.++++|++.||++|++|+.++..+.++.++||++|.+||++|+.++..+|.++|+++.++|.+|.++|
T Consensus 24 ~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddL 103 (503)
T KOG2451|consen 24 AQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDL 103 (503)
T ss_pred hhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHH
Confidence 57899999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|.|||+.||++||..+..+++||+..+++.+|.+.+...+.....+.++|+||+++|+|||||..+..++..+|
T Consensus 104 a~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAA 183 (503)
T KOG2451|consen 104 ATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAA 183 (503)
T ss_pred HHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999888888899999999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC---chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
|++||+||+||+++||++++.++++..+||+|+|++|+|+++ ..++++.|+.+|+|++|+||||+.+||.++.+++.
T Consensus 184 LAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsas 263 (503)
T KOG2451|consen 184 LAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSAS 263 (503)
T ss_pred HhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999963 45899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
..|++++||||+.|+||++|||+|+|++....++|.++||.|.+..|+|||+++||+|+++|.++++++++||.+|+++.
T Consensus 264 tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt 343 (503)
T KOG2451|consen 264 TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTT 343 (503)
T ss_pred hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
.||+|+..+.+++..++++|+++|+++++||+... .+++|++|||+.+++++|-+.+||+|||+.+|++|+|+||+|++
T Consensus 344 ~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ 423 (503)
T KOG2451|consen 344 QGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEW 423 (503)
T ss_pred cCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHH
Confidence 99999999999999999999999999999999543 56799999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccCC
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~~ 508 (509)
+|+++.||++++||+|..+..+++++|++|+|.+|....++...||||+|+||+||+++.+|+++|+..|.+++++.++
T Consensus 424 ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L~~ 502 (503)
T KOG2451|consen 424 ANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTLPI 502 (503)
T ss_pred hccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeecCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987764
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-115 Score=872.26 Aligned_cols=471 Identities=46% Similarity=0.721 Sum_probs=455.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+++.++++++++||+||+++++|+.++.+||+.||++|++||+ .|++++..+|..+|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 3699999999998999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|+.+.+.+.|||+.+++ .++..+++.+|||+.+++..++...+. ......|++++|+|||+.|+|||||+.+..|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~-~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPT-DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCC-CCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999999 899999999999999998886665443 334678999999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
+|||++||+||+||++++|+|+..++++++++|+|+||+|+|+|.|...+.+|.+|++|++|+||||+.+|+.|++++++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999884
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCC
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEG 348 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~-~~~G~p~~~~ 348 (509)
++|+++||||||+|.||++|||++.|++.+..+.|+|+||.|++.+|+|||+++||+|+++++++.++ +++|||+++.
T Consensus 260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~ 339 (501)
T KOG2450|consen 260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG 339 (501)
T ss_pred cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999976 9999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+.+||++++.|++++.+||+.++++||++++||.+....|+|++|||+.++.++|++++||+||||++|++|++.||+|+
T Consensus 340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~ 419 (501)
T KOG2450|consen 340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIE 419 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHH
Confidence 99999999999999999999999999999999987546789999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|++.|||++.|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+++++||+.|+|+++.
T Consensus 420 ~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 420 RANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred HhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998874
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-109 Score=873.50 Aligned_cols=470 Identities=58% Similarity=1.034 Sum_probs=448.3
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLA 91 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999986567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
+++++|+|||+.+++.|+..+++.++|++..+++..+...+...++...+++++|+|||++|+|||||+.+.++++++||
T Consensus 92 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (482)
T PRK11241 92 RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPAL 171 (482)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHH
Confidence 99999999999999999999999999999988776655443323345568899999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+++|+.|++.++++++|
T Consensus 172 aaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~ 251 (482)
T PRK11241 172 AAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKK 251 (482)
T ss_pred HhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999997778899999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+
T Consensus 252 ~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpl 331 (482)
T PRK11241 252 VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPL 331 (482)
T ss_pred EEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCC
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 434 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~ 434 (509)
+++.+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 332 i~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~ 411 (482)
T PRK11241 332 IDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTE 411 (482)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCC
Confidence 99999999999999999999999999975433579999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 435 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 435 ~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|||++||||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|++.
T Consensus 412 ~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 412 FGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred CCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 9999999999999999999999999999998877667899999999999999999999999999999764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-108 Score=859.97 Aligned_cols=466 Identities=52% Similarity=0.849 Sum_probs=445.5
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|++..+ +++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999998643 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
+++++|+|||+.+++.|+..+++.++|++..+++..+...+... +...++.++|+|||++|+|||||+.+.+|+++|||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999887776533322 56789999999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+++|+.|++.+++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999998777999999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCcccCc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVVQGP 353 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~-~~~G~p~~~~~~~Gp 353 (509)
+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.|+.+++||
T Consensus 239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gp 317 (472)
T COG1012 239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGP 317 (472)
T ss_pred EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 65 999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcC
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 433 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~ 433 (509)
++++.+++++.++|++++++|++++.||+.. . |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 318 li~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t 395 (472)
T COG1012 318 LISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDT 395 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999999999843 3 8999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 010482 434 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 434 ~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
+|||+++|||+|..++.++++++++|+||||++.. ..+.+||||+|.||+|+++|.+++++|++.|++.++..
T Consensus 396 ~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 396 EYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred CCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 99999999999999999999999999999998853 45779999999999999999999999999999988754
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-107 Score=865.02 Aligned_cols=471 Identities=32% Similarity=0.496 Sum_probs=445.7
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999875667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||+.+++.|+..+++.++|++..+....+...+....+...++.++|+|||++|+|||||+...++++++
T Consensus 193 la~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iap 272 (604)
T PLN02419 193 LAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPV 272 (604)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988776654433223455688999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+ .+.++.|+.|++|++|+||||+++|+.|++.+++++
T Consensus 273 ALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~l 351 (604)
T PLN02419 273 AVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKG 351 (604)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999996 468899999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.|+++++|
T Consensus 352 k~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~G 430 (604)
T PLN02419 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLG 430 (604)
T ss_pred CcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCccc---C-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRH---S-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~---~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
|++++.+++++.++|++++++|+++++||... . .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+
T Consensus 431 Plis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~ 510 (604)
T PLN02419 431 PVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAIS 510 (604)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHH
Confidence 99999999999999999999999999999753 1 3589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||+... ..+.+||||+|+||+| +++|.+|+++|++.|+|+++.
T Consensus 511 laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 511 IINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 9999999999999999999999999999999999998743 3468999999999999 799999999999999998764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-105 Score=853.09 Aligned_cols=474 Identities=83% Similarity=1.287 Sum_probs=452.1
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 104 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDL 104 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999998656789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.+++++...+...+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 105 a~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~A 184 (498)
T PLN02278 105 AQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPA 184 (498)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766544433334556788999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++++++
T Consensus 185 LaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~ 264 (498)
T PLN02278 185 LAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVK 264 (498)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCc
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp 353 (509)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||
T Consensus 265 ~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gp 344 (498)
T PLN02278 265 RVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGP 344 (498)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcC
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 433 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~ 433 (509)
++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 345 li~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~ 424 (498)
T PLN02278 345 LINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDT 424 (498)
T ss_pred ccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCC
Confidence 99999999999999999999999999997643357999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 434 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 434 ~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
+|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++++||
T Consensus 425 ~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~~~ 498 (498)
T PLN02278 425 EAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGNMN 498 (498)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEecCC
Confidence 99999999999999999999999999999998776667899999999999999999999999999999999886
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-105 Score=852.64 Aligned_cols=474 Identities=41% Similarity=0.676 Sum_probs=449.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+ .|+.+|.++|.++|++++++|+++++
T Consensus 21 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 100 (501)
T PLN02766 21 TKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIE 100 (501)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999866678999999999999999999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..+++ .|+..+++.+++++..+.+..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 179 (501)
T PLN02766 101 ELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKV 179 (501)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHHH
Confidence 999999999999999997 5999999999999998877666533221 23456789999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh-
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 269 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~- 269 (509)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.++++.|++||+|+.|.||||+++|+.|++.++
T Consensus 180 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 259 (501)
T PLN02766 180 APALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAAT 259 (501)
T ss_pred HHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999987889999999999999999999999999999998
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 260 ~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~ 339 (501)
T PLN02766 260 SNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRA 339 (501)
T ss_pred cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++++++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 340 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~ 419 (501)
T PLN02766 340 RQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKK 419 (501)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999764345799999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccCC
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 508 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~~ 508 (509)
+|+++|||+++|||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+|+++||+.|++++..+|.
T Consensus 420 aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~~~ 498 (501)
T PLN02766 420 ANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNS 498 (501)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecccc
Confidence 9999999999999999999999999999999999987777788999999999999999999999999999999988763
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-105 Score=843.88 Aligned_cols=468 Identities=36% Similarity=0.619 Sum_probs=443.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+ ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 357999999975 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..+++ .|+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 9999999999999997 499999999999998877665543222223456789999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 9999999999977889999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++|
T Consensus 240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~G 319 (472)
T TIGR03374 240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELG 319 (472)
T ss_pred cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCC-CEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 353 PLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
|++++.+++++.++|++++++| +++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 320 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an 399 (472)
T TIGR03374 320 PLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWAN 399 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHh
Confidence 9999999999999999999999 799999976433579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|++++
T Consensus 400 ~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 400 DSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999887777889999999999999999999999999999875
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-104 Score=842.06 Aligned_cols=471 Identities=37% Similarity=0.655 Sum_probs=445.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999866678899999999999999999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCC--CC-ceeEEEeecceEEEEEcCCChhHHHHH
Q 010482 112 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATL--PD-RRLFVLKQPVGVAGAITPWNFPLAMIT 187 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~ 187 (509)
+|++++++|+|||..+++ .|+..+++.+++++.+.+...+...+... ++ ...++.++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999997 69999999999999988877655433221 22 246789999999999999999999999
Q ss_pred HhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHH
Q 010482 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 267 (509)
Q Consensus 188 ~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 267 (509)
+++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred hhc-CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 268 AAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 268 ~~~-~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 996 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC--CHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE 424 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~~ 424 (509)
+++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+ |++
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~ 405 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD 405 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence 999999999999999999999999999999999997643457999999999999999999999999999999998 699
Q ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 425 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 425 eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|||+++|+++|||++||||+|.++++++++++++|.||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 406 eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 406 GVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 99999999999999999999999999999999999999999877777899999999999999999999999999999864
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-104 Score=846.03 Aligned_cols=473 Identities=43% Similarity=0.680 Sum_probs=449.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|++++++|+++++
T Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 137 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHND 137 (538)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876778999999999999999999999999999999999997 49999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..+++ .|+..+++.+++|+.+..+..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 138 ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i 216 (538)
T PLN02466 138 ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216 (538)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence 999999999999999996 5999999999999998887766544322 23356899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|++||+|++|.||||+++|+.|++.+++
T Consensus 217 ~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~ 296 (538)
T PLN02466 217 GPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAK 296 (538)
T ss_pred hHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999985
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|.++++
T Consensus 297 ~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~ 376 (538)
T PLN02466 297 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGV 376 (538)
T ss_pred cCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 377 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~ 456 (538)
T PLN02466 377 EQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRR 456 (538)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999865345789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
+|+++|||+++|||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+|+++||+.|++++..+|
T Consensus 457 aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~ 534 (538)
T PLN02466 457 ANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKN 534 (538)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCC
Confidence 999999999999999999999999999999999998777778899999999999999999999999999999887765
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-104 Score=837.84 Aligned_cols=468 Identities=39% Similarity=0.649 Sum_probs=443.1
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh-hhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
+||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+. |+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA 81 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 699999998656678999999999999999999999999999999999985 9999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCC-----CCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 115 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL-----PDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
+++++|+|||..+++. |+..+++.+++++.++....+...+... .+...++.++|+|||++|+|||||+.+.++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 9999999999999985 9999999999999888776554332111 123567899999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++. +++.|++||+|++|.||||+++|+.|.+.+
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 240 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQA 240 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999765 899999999999999999999999999999
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 241 a~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (477)
T cd07113 241 ASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDES 320 (477)
T ss_pred HhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~ 400 (477)
T cd07113 321 VMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQ 400 (477)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976433579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 401 ~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 401 LINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999998877778899999999999999999999999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-103 Score=834.55 Aligned_cols=467 Identities=31% Similarity=0.511 Sum_probs=440.1
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus 22 ~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (508)
T PLN02315 22 GCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLG 99 (508)
T ss_pred CceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 47999999864 6789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
+++++|+|||..+++.|+..+++.++|++..++.+.+...+...++...+..++|+|||++|+|||||+.++++++++||
T Consensus 100 ~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~AL 179 (508)
T PLN02315 100 RLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIAL 179 (508)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHH
Confidence 99999999999999999999999999999988777665444333344557889999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHH----HHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 195 ACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||+||+|||+.+|+++.. +.++|.++|+|+|++|+++| +.++++.|+.||++++|.||||+++|+.|++.++.
T Consensus 180 aaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~ 258 (508)
T PLN02315 180 VCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNA 258 (508)
T ss_pred HcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999887 67888999999999999998 77889999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||++++++
T Consensus 259 ~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~ 338 (508)
T PLN02315 259 RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTL 338 (508)
T ss_pred cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+||++++.+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++
T Consensus 339 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~a 417 (508)
T PLN02315 339 LGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEIN 417 (508)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999764345799999999 599999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHh--hccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSE--ALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~--~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|||+++|||+|.+.++++++ ++++|+||||.... ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 418 N~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 418 NSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence 999999999999999999999985 79999999998654 3468999999999999999999999999999988763
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-103 Score=830.33 Aligned_cols=468 Identities=39% Similarity=0.654 Sum_probs=444.3
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 47999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 115 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
+++++|+|||+.+++. |+..+++.+++|+.......+...+.. .+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999985 999999999999988776655433322 23456889999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+++.|+||||+++|+.|.+.++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999885 99999999999778889999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCc
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp 353 (509)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||
T Consensus 240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gp 319 (475)
T cd07117 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGA 319 (475)
T ss_pred cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 399 (475)
T cd07117 320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM 399 (475)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence 99999999999999999999999999997642 25789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+|+++|||+++|||+|.+++.++++++++|+|+||++...++.+||||+|+||+|+++|.+|+++||+.|+++++
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999777778899999999999999999999999999999764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-103 Score=833.30 Aligned_cols=469 Identities=42% Similarity=0.701 Sum_probs=445.1
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh--hhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+. |+++|.++|.++|++++++|+++++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999997656788999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..+++. |+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 9999999999999999974 999999999999998877666544322 23456789999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|++||+++.|+||||+++|+.|++.+++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877889999999999999999999999999999996
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus 243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 322 (476)
T cd07142 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV 322 (476)
T ss_pred cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.+++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus 323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 402 (476)
T cd07142 323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKR 402 (476)
T ss_pred cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999765445789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+|+++|||+++|||+|.++++++++++++|+||||++...++.+||||+|+||+|+++|.+|+++||+.|++++
T Consensus 403 ~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 476 (476)
T cd07142 403 ANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEeC
Confidence 99999999999999999999999999999999999887777889999999999999999999999999999863
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-103 Score=831.77 Aligned_cols=471 Identities=44% Similarity=0.695 Sum_probs=447.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhh-----HhhhcCCHHHHHHHHHHHHHHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-----NSWSKLTAAERSKGLRKWYDLLMA 108 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~iL~~~a~~l~~ 108 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+++|.++|.++|++++++|++
T Consensus 8 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~ 87 (503)
T PLN02467 8 RQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITE 87 (503)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHH
Confidence 468999999987667899999999999999999999999999999999999 899999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC-CC--CCCceeEEEeecceEEEEEcCCChhHHH
Q 010482 109 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-AT--LPDRRLFVLKQPVGVAGAITPWNFPLAM 185 (509)
Q Consensus 109 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 185 (509)
++++|++++++|+|||+.+++.|+..+++.+++|+..++++.+.... .. ..+...+++++|+|||++|+|||||+.+
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 167 (503)
T PLN02467 88 RKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLM 167 (503)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHH
Confidence 99999999999999999999999999999999999998887665321 11 1234568899999999999999999999
Q ss_pred HHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHH
Q 010482 186 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265 (509)
Q Consensus 186 ~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 265 (509)
.++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+.+|+.|+
T Consensus 168 ~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 247 (503)
T PLN02467 168 ATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIM 247 (503)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788899999999999999999999999999
Q ss_pred HHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 266 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 266 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+
T Consensus 248 ~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~ 327 (503)
T PLN02467 248 TAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPL 327 (503)
T ss_pred HHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 423 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~ 423 (509)
|+++++||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 407 (503)
T PLN02467 328 EEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTE 407 (503)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCH
Confidence 9999999999999999999999999999999999997642 35789999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||||+++|+++|||+++|||+|.+.++++++++++|+||||++......+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 408 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~ 487 (503)
T PLN02467 408 DEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTK 487 (503)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEE
Confidence 99999999999999999999999999999999999999999877666789999999999999999999999999999988
Q ss_pred e
Q 010482 504 G 504 (509)
Q Consensus 504 ~ 504 (509)
.
T Consensus 488 ~ 488 (503)
T PLN02467 488 Y 488 (503)
T ss_pred e
Confidence 5
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-103 Score=833.27 Aligned_cols=470 Identities=40% Similarity=0.654 Sum_probs=445.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++.+++++||.||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|
T Consensus 7 ~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (488)
T PRK13252 7 QSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDEL 86 (488)
T ss_pred ccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 45799999997666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..+++. |+..+++.+++++...+...+...+.. .+...+++++|+|||++|+|||||+.+.++++++
T Consensus 87 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ 165 (488)
T PRK13252 87 AALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAP 165 (488)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 99999999999999984 999999999999998877655543322 2445688999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++. +++.|+.||+|+.|+||||+++|+.|.+.++.++
T Consensus 166 ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l 244 (488)
T PRK13252 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASL 244 (488)
T ss_pred HHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998665 8999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++|
T Consensus 245 ~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 324 (488)
T PRK13252 245 KEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFG 324 (488)
T ss_pred CcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
|++++.+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~ 404 (488)
T PRK13252 325 PLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIA 404 (488)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHH
Confidence 999999999999999999999999999996432 2479999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 405 ~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 405 RANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred HHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 99999999999999999999999999999999999987666678999999999999999999999999999998753
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-103 Score=830.42 Aligned_cols=468 Identities=36% Similarity=0.623 Sum_probs=445.1
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 115 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
+++++|+|||+.+++. |+..+++.+++++.......+...+.. .+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999975 999999999999998877655443322 34557889999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|++||+|+.|+||||+++|+.|++.++++++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 239 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI 239 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999996 99999999999878899999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 274 KVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~da-----Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|++
T Consensus 240 p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 319 (480)
T cd07559 240 PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPE 319 (480)
T ss_pred cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 424 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ 424 (509)
+++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 399 (480)
T cd07559 320 TMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEE 399 (480)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHH
Confidence 9999999999999999999999999999999997642 357999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 425 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 425 eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+++++
T Consensus 400 eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 400 EAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS 479 (480)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998777778899999999999999999999999999999763
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-102 Score=828.28 Aligned_cols=468 Identities=38% Similarity=0.614 Sum_probs=441.8
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh-hhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+. ++.+++++||+||+++++++.++.+|++.|+++|++||+. |+++|.++|.++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4799999997 4688999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCC---CCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL---PDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++++++|+|||..+++. |+..+++.+++++...+...+...+... .+...++.++|+|||++|+|||||+...+++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 99999999999999975 9999999999999988766554332111 1235678999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCch-hhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
+++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++. ++++.|..||+|+.|+||||+.+|+.|++.+
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a 239 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998654 4888999999999999999999999999999
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|.+++
T Consensus 240 a~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 319 (481)
T TIGR03216 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPA 319 (481)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 423 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~ 423 (509)
+++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~ 399 (481)
T TIGR03216 320 TNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSE 399 (481)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCH
Confidence 9999999999999999999999999999999997532 25799999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||||+++|+++|||+++|||+|.+.++++++++++|+||||++...++.+||||+|+||+|+++|.+|+++||+.|++++
T Consensus 400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 479 (481)
T TIGR03216 400 EEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI 479 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999887777889999999999999999999999999999976
Q ss_pred e
Q 010482 504 G 504 (509)
Q Consensus 504 ~ 504 (509)
+
T Consensus 480 ~ 480 (481)
T TIGR03216 480 K 480 (481)
T ss_pred e
Confidence 4
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-102 Score=827.12 Aligned_cols=470 Identities=40% Similarity=0.665 Sum_probs=446.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+ ++++++++||+||+++++++.++.+|++.++++|++||+.|+++|.++|.++|+++++.|++++++|
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 81 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEF 81 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999875 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..+++. |+..+++.+++++...+.+.+...+....+...++.++|+|||++|+|||||+...++++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ 161 (475)
T PRK13473 82 ARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAP 161 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHH
Confidence 99999999999999964 99999999999998887776553322223445688999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|++.++++.|++||+|+.|+||||+++|+.|.+.+++++
T Consensus 162 ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~ 240 (475)
T PRK13473 162 ALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240 (475)
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999 9999999999977889999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|
T Consensus 241 ~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~g 320 (475)
T PRK13473 241 KRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELG 320 (475)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCC-CEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 353 PLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
|++++.+++++.++|+++.++| +++++||...+..|+|++|||+.++++++++++||+||||++|++|+|+||||+++|
T Consensus 321 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N 400 (475)
T PRK13473 321 PLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWAN 400 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHh
Confidence 9999999999999999999999 999999986533578999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+++++|
T Consensus 401 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 401 DSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999998777778999999999999999999999999999998875
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-102 Score=825.81 Aligned_cols=469 Identities=35% Similarity=0.530 Sum_probs=442.6
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+.|+++|.++|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999987556889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
+++++|+|||+.+++.|+..+++.+++++.......++..+...++...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766665433222344578999999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|+ .+.++.|++||+|+.|+||||+++|+.|.+.++++++|
T Consensus 162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999984 57889999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpl 320 (478)
T cd07085 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPV 320 (478)
T ss_pred EEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 400 (478)
T cd07085 321 ISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400 (478)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999997532 257999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEe
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~ 504 (509)
|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|.+|+++||+.|+|+++
T Consensus 401 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 999999999999999999999999999999999987544 367999999999999 57999999999999999765
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-102 Score=827.52 Aligned_cols=469 Identities=41% Similarity=0.677 Sum_probs=444.1
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+.|+++|.++|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46999999987567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHH-hhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
+++++|+|||..+++.|+..+++.+++++.... ...+...+. +....++.++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccC--CCceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999998876 333333222 13456789999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.++.|+.||+|+.|+||||+++|+.|++.++++++
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~ 239 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK 239 (488)
T ss_pred HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999777888999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCc
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp 353 (509)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||
T Consensus 240 ~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp 319 (488)
T TIGR02299 240 RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP 319 (488)
T ss_pred eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-------CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS-------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea 399 (488)
T TIGR02299 320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEA 399 (488)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999997532 24789999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|+++|||++||||+|.+.++++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++||+.|+++++.
T Consensus 400 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 400 IEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999999999999999999999987776778999999999999999999999999999998863
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-102 Score=824.62 Aligned_cols=470 Identities=42% Similarity=0.677 Sum_probs=445.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|++++
T Consensus 7 ~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T cd07141 7 TKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDR 86 (481)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 4689999999876678999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 165 (481)
T cd07141 87 AYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWK 165 (481)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHHH
Confidence 999999999999999766 45999999999999998887766543322 2345678999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 245 (481)
T cd07141 166 LAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAG 245 (481)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999988
Q ss_pred c-CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 270 G-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 270 ~-~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
. +++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 246 ~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 325 (481)
T cd07141 246 KSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPK 325 (481)
T ss_pred hhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 405 (481)
T cd07141 326 TEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIE 405 (481)
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999987544579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 406 ~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 481 (481)
T cd07141 406 RANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTIK 481 (481)
T ss_pred HHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEEC
Confidence 9999999999999999999999999999999999998777778899999999999999999999999999998763
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-102 Score=822.89 Aligned_cols=467 Identities=40% Similarity=0.664 Sum_probs=442.3
Q ss_pred CeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+.+. ..++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 79 (473)
T cd07097 2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEEL 79 (473)
T ss_pred CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 479999999752 347999999 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.+++|+...++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 80 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~A 159 (473)
T cd07097 80 ARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPA 159 (473)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766543332335567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.++++.|+.||+|+.|.||||+++|+.|.+.++++++
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (473)
T cd07097 160 LAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239 (473)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999777899999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCc
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp 353 (509)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++||
T Consensus 240 ~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gp 319 (473)
T cd07097 240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGP 319 (473)
T ss_pred cEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 399 (473)
T cd07097 320 VVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIAN 399 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHh
Confidence 99999999999999999999999999997543 2478999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~ 503 (509)
+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|++
T Consensus 400 ~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~ 473 (473)
T cd07097 400 DTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV 473 (473)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999998665 3468999999999999 8999999999999999863
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-102 Score=821.80 Aligned_cols=465 Identities=35% Similarity=0.593 Sum_probs=438.6
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA 81 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 115 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
+++++|+|||+.+++. |+..+++.+++++.......+...+. .++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999985 99999999999998877665543322 233456789999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+++..|+.||+|++|+||||+++|+.|.+.++++++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~ 239 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENII 239 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999998 99999999999777899999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCC------CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC
Q 010482 274 KVSLELGGNAPCIVFDD------ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 347 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~d------aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~ 347 (509)
|+++|||||||+||++| ||++.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++++|+|+++
T Consensus 240 p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 318 (479)
T cd07116 240 PVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDT 318 (479)
T ss_pred eEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999998 79999999999865 599999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCH
Q 010482 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 423 (509)
Q Consensus 348 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~ 423 (509)
++.+||++++.+++++.++|++++++|+++++||.... .+|+|+.|||+.+++ +|++++||+||||++|++|+|+
T Consensus 319 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~ 397 (479)
T cd07116 319 ETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDE 397 (479)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCH
Confidence 99999999999999999999999999999999997642 257899999999875 9999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|++++
T Consensus 398 ~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 477 (479)
T cd07116 398 EEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477 (479)
T ss_pred HHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999877777789999999999999999999999999999976
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-101 Score=821.25 Aligned_cols=467 Identities=38% Similarity=0.634 Sum_probs=443.6
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 115 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 115 (509)
+||||+|+.+. +.+++++||+||+++++++.++.+|++.++++|++||+.|+++|.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999864 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhh
Q 010482 116 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195 (509)
Q Consensus 116 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 195 (509)
++++|+|||..+++.|+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888876654443333446788999999999999999999999999999999
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||+||+|||+.+|+++..++++|.++ |+|+|++|+|+|++. +++.|.+||+++.|.||||+++|+.|++.++++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~ 238 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999999 999999999998654 889999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++
T Consensus 239 ~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (478)
T cd07086 239 FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLV 318 (478)
T ss_pred CCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC--CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 319 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~ 398 (478)
T cd07086 319 GPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAI 398 (478)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999976532 4789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~--l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+|+++|||+++|||+|.+++++++++ +++|+||||++... .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 399 ~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 399 NNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred HhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999 99999999987653 46899999999999999999999999999999876
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-101 Score=817.68 Aligned_cols=470 Identities=41% Similarity=0.696 Sum_probs=444.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH-hhh-cCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+ .+|.++|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3689999999876678899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..++ +.|+..+++.+++++.++....+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999665 46999999999999999877665543322 34456789999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999885
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 405 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR 405 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999865345789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999877778899999999999999999999999999999764
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-101 Score=817.92 Aligned_cols=464 Identities=35% Similarity=0.597 Sum_probs=436.0
Q ss_pred eEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 010482 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 116 (509)
Q Consensus 37 ~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 116 (509)
+|||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999984 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhC
Q 010482 117 ITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 196 (509)
Q Consensus 117 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 196 (509)
+++|+|||+.+++.|+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+.++++++++||++
T Consensus 80 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 159 (474)
T cd07130 80 VSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVC 159 (474)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHc
Confidence 99999999999999999999999999887776655544333344556788999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHH----HHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 197 GCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 197 GN~vVlkps~~~p~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||+||+|||+.+|+++..++++ |.++|+|+|++|+++|+ .+.++.|++||+|++|.||||+++|+.|++.+++++
T Consensus 160 GN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~ 238 (474)
T cd07130 160 GNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARF 238 (474)
T ss_pred CCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcC
Confidence 9999999999999999887765 57999999999999984 567999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++|
T Consensus 239 ~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~G 318 (474)
T cd07130 239 GRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVG 318 (474)
T ss_pred CCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||...+.+|+|++|||+.++++ |++++||+||||++|++|+|+||||+++|+
T Consensus 319 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~ 397 (474)
T cd07130 319 PLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNE 397 (474)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence 9999999999999999999999999999986433579999999998877 999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~--l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+++|||+|.+++++++++ +++|+||||.... ..+.+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 398 ~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 398 VPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred CCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 99999999999999999999987 9999999998654 457899999999999999999999999999998875
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-101 Score=817.76 Aligned_cols=470 Identities=43% Similarity=0.712 Sum_probs=444.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh-hhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+. |+++|.++|.++|+++++.|++++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 87 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL 87 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35799999998655678999999999999999999999999999999999996 88999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+..++|+|||++|+|||||+.+.+++++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 166 (484)
T cd07144 88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA 166 (484)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence 9999999999998765 67999999999999998887755443322 344568899999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+.+|+.|.+.++++
T Consensus 167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~ 246 (484)
T cd07144 167 PALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQN 246 (484)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997778999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCcc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVV 350 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~-~~~G~p~~~~~~ 350 (509)
++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|++++++
T Consensus 247 ~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~ 326 (484)
T cd07144 247 LKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTV 326 (484)
T ss_pred CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai 427 (509)
+||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 327 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai 406 (484)
T cd07144 327 VGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAI 406 (484)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHH
Confidence 99999999999999999999999999999997643 257899999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 428 ~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+++|+++|||+++|||+|.+++.++++++++|+||||++...++.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 407 ~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 407 KKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999998877677899999999999999999999999999999875
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-101 Score=811.18 Aligned_cols=456 Identities=35% Similarity=0.540 Sum_probs=431.2
Q ss_pred CCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 010482 48 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 127 (509)
Q Consensus 48 ~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 127 (509)
.++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCC
Q 010482 128 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 207 (509)
Q Consensus 128 a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~ 207 (509)
++.|+..+++.++||+.......+.... ..++...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999999887665433211 123456789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEE
Q 010482 208 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 287 (509)
Q Consensus 208 ~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 287 (509)
+|+++..+.++|.++|+|+|++|+|+|++.. +..|+.||+++.|+||||+++|+.|++.++.+++++++|+|||||+||
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV 243 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEE
Confidence 9999999999999999999999999986544 456899999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 288 ~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 244 ~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i 323 (462)
T PRK13968 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQV 323 (462)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 324 ~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~ 403 (462)
T PRK13968 324 EATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDET 403 (462)
T ss_pred HHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 99999999999999764334789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
.++++++++++|+||||+....++.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 404 ~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 404 QARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 9999999999999999988777788999999999999999999999999999997753
|
|
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-101 Score=817.93 Aligned_cols=469 Identities=43% Similarity=0.678 Sum_probs=445.6
Q ss_pred eEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 37 ~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
||||+|..+.++.+++++||+||+++++++.++.+|++++++.|++||+ .|+++|.++|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6899998765678899999999999999999999999999999999997 69999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
+++++|+|||..+++.|+..+++.+++++...++..+...+.. ++...++.++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998877655443322 345678999999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|++||++++|.||||+++|+.|++.++++++|
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999997777899999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus 240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl 319 (482)
T cd07119 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL 319 (482)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 399 (482)
T cd07119 320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA 399 (482)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999999999997542 247999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+++++.+
T Consensus 400 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~~ 475 (482)
T cd07119 400 NDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLS 475 (482)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecC
Confidence 9999999999999999999999999999999999876667889999999999999999999999999999988754
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-101 Score=809.90 Aligned_cols=453 Identities=37% Similarity=0.561 Sum_probs=429.9
Q ss_pred EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 51 ~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++++||+||+++++++.++.+|++.++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 208 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~ 208 (509)
|+..+++.++|++..+++..+...... ..+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999998877654322111 123456889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEc
Q 010482 209 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF 288 (509)
Q Consensus 209 p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 288 (509)
|+++..|.++|.++|+|+|++|+|++ +.+.+..|+.||++++|+||||+++|+.|++.++++++|+++|+|||||+||+
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~ 241 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVM 241 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEEC
Confidence 99999999999999999999999986 34567889999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 010482 289 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 368 (509)
Q Consensus 289 ~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 368 (509)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|+++++||++++.+++++.++|+
T Consensus 242 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~ 321 (457)
T PRK09406 242 PSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVD 321 (457)
T ss_pred CCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q 010482 369 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448 (509)
Q Consensus 369 ~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~ 448 (509)
+++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 322 ~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~ 401 (457)
T PRK09406 322 DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAE 401 (457)
T ss_pred HHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99999999999998754457999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 449 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 449 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++++++++++|+||||++....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 402 ~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 402 QERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEeC
Confidence 99999999999999999877778899999999999999999999999999999763
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-101 Score=820.44 Aligned_cols=471 Identities=27% Similarity=0.400 Sum_probs=439.3
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHH-HhH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM-AHK 110 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~-~~~ 110 (509)
..++||||+|+.+ ++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|+ +++
T Consensus 31 ~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~ 109 (533)
T TIGR01236 31 EIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYR 109 (533)
T ss_pred eeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcH
Confidence 3568999999975 456899999997 8999999999999999999999999999999999999999999999999 599
Q ss_pred HHHHHHHHHHcCCCHHHHhhH-HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecc-eEEEEEcCCChhHHHHHH
Q 010482 111 EELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMITR 188 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~ 188 (509)
++|++++++|+|||+.+++.| +..+++.++|++.++.+..+........+...++.++|+ |||++|+|||||+....+
T Consensus 110 ~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~ 189 (533)
T TIGR01236 110 EEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNL 189 (533)
T ss_pred HHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHH
Confidence 999999999999999999886 999999999999988776554331122345678999999 999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++|| +||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 190 ~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~a 268 (533)
T TIGR01236 190 PGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWV 268 (533)
T ss_pred HHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999 8999999999999999999999999999999999999997788999999999999999999999999999999
Q ss_pred hcCCCe------EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccC
Q 010482 269 AGTVKK------VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 342 (509)
Q Consensus 269 ~~~~~~------~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G 342 (509)
++++++ +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 269 a~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G 348 (533)
T TIGR01236 269 ASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVG 348 (533)
T ss_pred HhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcC
Confidence 998874 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCC--CEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEe
Q 010482 343 DGFGEGVVQGPLINKAALEKVETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 420 (509)
Q Consensus 343 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~G--a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~ 420 (509)
+|.|+++++||++++.+++++.+++++++++| +++++||......|+|++|||+.+++++|++++||+||||++|++|
T Consensus 349 ~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~ 428 (533)
T TIGR01236 349 DPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVY 428 (533)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEe
Confidence 99999999999999999999999999999987 7999999764335799999999999999999999999999999999
Q ss_pred CC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHH
Q 010482 421 KT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGM 492 (509)
Q Consensus 421 ~~--~~eai~l~-n~~~~gl~asv~t~d~~~~~~~~~~l~--~G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l 492 (509)
+| ++|||+++ |+++|||+++|||+|.+++.+++++|+ +|+||||..... .+.+||||+|.||+| +++|.+|+
T Consensus 429 ~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l 508 (533)
T TIGR01236 429 PDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNL 508 (533)
T ss_pred CCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHH
Confidence 99 49999999 889999999999999999999999977 999999976543 368999999999998 99999999
Q ss_pred HhhheeeEEEEec
Q 010482 493 DEFLEIKYVCLGD 505 (509)
Q Consensus 493 ~~~~~~k~~~~~~ 505 (509)
++|++.|+++...
T Consensus 509 ~~f~~~k~v~~~~ 521 (533)
T TIGR01236 509 LRWTSARSIKETF 521 (533)
T ss_pred HHhcceEEEEEEc
Confidence 9999999997753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-100 Score=814.01 Aligned_cols=469 Identities=44% Similarity=0.711 Sum_probs=443.8
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhh--cCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++..++++||+||+++++++.++.+|++.++++|++||+.|+ ++|.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999998765678899999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999999665 45999999999999988877655543322 34567899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+++|+.|++.++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999778889999999999999999999999999999987
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 322 (476)
T cd07091 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT 322 (476)
T ss_pred cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.+++++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 402 (476)
T cd07091 323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIER 402 (476)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHH
Confidence 99999999999999999999999999999999865445789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|++++
T Consensus 403 ~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 403 ANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999977777889999999999999999999999999999864
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-100 Score=813.19 Aligned_cols=467 Identities=46% Similarity=0.765 Sum_probs=445.0
Q ss_pred eEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 010482 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 116 (509)
Q Consensus 37 ~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 116 (509)
||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997656789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhC
Q 010482 117 ITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 196 (509)
Q Consensus 117 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 196 (509)
+++|+|||..+++.|+..+++.+++++.++.+..+...+...++...+.+++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999998877666544433335567889999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEE
Q 010482 197 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276 (509)
Q Consensus 197 GN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~ 276 (509)
||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||++++|.||||+++|+.|++.++++++|++
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 240 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence 99999999999999999999999999999999999999777788999999999999999999999999999999999999
Q ss_pred eecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccC
Q 010482 277 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 356 (509)
Q Consensus 277 lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~ 356 (509)
+|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++.+||+++
T Consensus 241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 320 (468)
T cd07088 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN 320 (468)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 010482 357 KAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 435 (509)
Q Consensus 357 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~ 435 (509)
+.+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 400 (468)
T cd07088 321 EAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY 400 (468)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCC
Confidence 99999999999999999999999997653 35799999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 436 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 436 gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||+++|||+|.++++++++++++|+||||++....+..||||+|+||+|+++|++|+++||+.|+|++
T Consensus 401 gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 401 GLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred CceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999987666677999999999999999999999999999863
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-101 Score=813.05 Aligned_cols=462 Identities=44% Similarity=0.723 Sum_probs=439.7
Q ss_pred eEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 010482 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 116 (509)
Q Consensus 37 ~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 116 (509)
||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997656789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhh
Q 010482 117 ITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195 (509)
Q Consensus 117 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 195 (509)
+++|+|||..++ ..|+..+++.+++++...++..+...+...+ ...+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 6799999999999999887765554332222 45678999999999999999999999999999999
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeE
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~ 275 (509)
+||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+|++|.||||+++|+.|.+.+++++|++
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~ 239 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV 239 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence 99999999999999999999999999999999999999977789999999999999999999999999999999999999
Q ss_pred EeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCccc
Q 010482 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 355 (509)
Q Consensus 276 ~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i 355 (509)
++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++
T Consensus 240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 319 (467)
T TIGR01804 240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI 319 (467)
T ss_pred EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 356 NKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 356 ~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
++.+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n 399 (467)
T TIGR01804 320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN 399 (467)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999997643 2478999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k 499 (509)
+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++||+.|
T Consensus 400 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 400 DTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999999999999999999998777778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-100 Score=818.07 Aligned_cols=469 Identities=26% Similarity=0.408 Sum_probs=437.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHH-hHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-HKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~-~~~ 111 (509)
.++||||+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++ +++
T Consensus 33 ~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (522)
T cd07123 33 IPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRY 110 (522)
T ss_pred cCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHH
Confidence 458999999974 57899999994 99999999999999999999999999999999999999999999999997 899
Q ss_pred HHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecc-eEEEEEcCCChhHHHHHHh
Q 010482 112 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~ 189 (509)
+|++++++|+|||..+++. |+..+++.++|++..+.+..+...+....+...++.++|+ |||++|+|||||+....++
T Consensus 111 ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~ 190 (522)
T cd07123 111 ELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLA 190 (522)
T ss_pred HHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHH
Confidence 9999999999999999965 8889999999999888776554332222245678999998 9999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++|| +||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 191 ~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa 269 (522)
T cd07123 191 GAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIG 269 (522)
T ss_pred HHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999 69999999999999999999999999999999999999977789999999999999999999999999999999
Q ss_pred cCCC------eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCC
Q 010482 270 GTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 343 (509)
Q Consensus 270 ~~~~------~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~ 343 (509)
++++ ++++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 270 ~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~ 349 (522)
T cd07123 270 ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGD 349 (522)
T ss_pred hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCC
Confidence 8877 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHC-CCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCC
Q 010482 344 GFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 422 (509)
Q Consensus 344 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~ 422 (509)
|+|+++++||++++.+++++.++|++++++ |+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 350 p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 429 (522)
T cd07123 350 PDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPD 429 (522)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCC
Confidence 999999999999999999999999999999 9999999975433579999999999999999999999999999999995
Q ss_pred --HHHHHHHHhcCC-CCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHh
Q 010482 423 --EEEAIHMANDTN-AGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDE 494 (509)
Q Consensus 423 --~~eai~l~n~~~-~gl~asv~t~d~~~~~~~~~~l--~~G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l~~ 494 (509)
+||+|+++|++. |||++||||+|.+++.++++++ ++|+||||+.... .+.+||||+|.||+| +++|.+++++
T Consensus 430 ~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~ 509 (522)
T cd07123 430 SDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLR 509 (522)
T ss_pred CCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHH
Confidence 799999999985 9999999999999999999996 5999999986553 357999999999996 9999999999
Q ss_pred hheeeEEEEec
Q 010482 495 FLEIKYVCLGD 505 (509)
Q Consensus 495 ~~~~k~~~~~~ 505 (509)
||+.|++++..
T Consensus 510 ~~~~k~~~~~~ 520 (522)
T cd07123 510 WVSPRTIKETF 520 (522)
T ss_pred hcceEEEEEec
Confidence 99999997754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-100 Score=812.73 Aligned_cols=471 Identities=37% Similarity=0.613 Sum_probs=445.0
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHh
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAH 109 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~ 109 (509)
+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|+++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 97 (494)
T PRK09847 18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAH 97 (494)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 345689999998876678899999999999999999999999999999999997 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 110 KEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 110 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
+++|++++++|+|||+.++. .|+..+++.+++++...+...++..+.. .+...++.++|+|||++|+|||||+..+++
T Consensus 98 ~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (494)
T PRK09847 98 AEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTCW 176 (494)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHHH
Confidence 99999999999999999885 4999999999999998888766544332 344568899999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||+++.|+||||+.+|+.|.+.+
T Consensus 177 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~a 256 (494)
T PRK09847 177 KLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDA 256 (494)
T ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998788899999999999999999999999999998
Q ss_pred h-cCCCeEEeecCCCCceEEcCCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 269 A-GTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 269 ~-~~~~~~~lelgG~~~~iV~~da-Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
+ .+++++++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++.+++|+|.+
T Consensus 257 a~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 336 (494)
T PRK09847 257 GDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLD 336 (494)
T ss_pred hhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 5899999999999999999997 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+++.+||++++.+++++.++|++++++| ++++||... ..++|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 337 ~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 414 (494)
T PRK09847 337 PATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQA 414 (494)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHH
Confidence 9999999999999999999999999999 999998764 34689999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++.+
T Consensus 415 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 493 (494)
T PRK09847 415 LQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL 493 (494)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999999998777778999999999999999999999999999998753
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-100 Score=809.99 Aligned_cols=462 Identities=39% Similarity=0.660 Sum_probs=438.6
Q ss_pred CEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 010482 40 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL 119 (509)
Q Consensus 40 g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 119 (509)
|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 57877655678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCE
Q 010482 120 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCT 199 (509)
Q Consensus 120 e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 199 (509)
|+|||..+++.|+..+++.+++++....+..+...+...++...++.++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999988777665544433345567889999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHH-HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEee
Q 010482 200 VVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 278 (509)
Q Consensus 200 vVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~le 278 (509)
||+|||+.+|+++ ..+.++|.++|+|+|++|+|+|++.++++.|++||.+++|.||||+++|+.|++.++++++|+++|
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE 240 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999999996 789999999999999999999977788999999999999999999999999999999999999999
Q ss_pred cCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHH
Q 010482 279 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA 358 (509)
Q Consensus 279 lgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~ 358 (509)
+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||++++.
T Consensus 241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 320 (465)
T cd07151 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES 320 (465)
T ss_pred CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcE
Q 010482 359 ALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438 (509)
Q Consensus 359 ~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~ 438 (509)
+++++.+++++++.+|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 321 ~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 397 (465)
T cd07151 321 QVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLS 397 (465)
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccce
Confidence 9999999999999999999999964 3689999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 439 asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+|.++++++++++++|+||||+++.. .+.+||||+|+||+|+++|.+++++||+.|++++.
T Consensus 398 a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 398 GAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred EEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 9999999999999999999999999987654 46899999999999999999999999999998763
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-101 Score=809.02 Aligned_cols=447 Identities=65% Similarity=1.066 Sum_probs=427.4
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 132 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 132 (509)
++||+||+++++++.++.+|++.++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH
Q 010482 133 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~ 212 (509)
..+++.++|++....+..+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999999888777665444333345567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCC-chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 213 LAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 213 ~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
..++++|.++|+|+|++|+++|+ +.++++.|++||++++|.||||+.+|+.|++.++.+++|+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 99999999999999999999997 67889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 320 (448)
T TIGR01780 241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV 320 (448)
T ss_pred CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q 010482 372 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~ 451 (509)
++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 321 ~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~ 400 (448)
T TIGR01780 321 EKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWR 400 (448)
T ss_pred HCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHH
Confidence 99999999997653457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheee
Q 010482 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 499 (509)
Q Consensus 452 ~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k 499 (509)
+++++++|+||||++...++.+||||+|+||+|+++|.+|+++||+.|
T Consensus 401 ~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 401 VAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999999999998777778999999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-100 Score=814.98 Aligned_cols=469 Identities=31% Similarity=0.517 Sum_probs=441.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|++.|++.|++||+.|+++|.++|.++|++++++|++++++
T Consensus 33 ~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (511)
T TIGR01237 33 YPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHE 110 (511)
T ss_pred cceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 357999999974 5679999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.+++++..++...+...+...++...+++++|+|||++|+|||||+..+++++++
T Consensus 111 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 111 LNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999888776543332233556789999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh---
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA--- 269 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~--- 269 (509)
||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+++|+.|++.++
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~ 270 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQ 270 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999977789999999999999999999999999999887
Q ss_pred ---cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 270 ---GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 270 ---~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 271 ~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~ 350 (511)
T TIGR01237 271 PGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDD 350 (511)
T ss_pred ccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+++++||++++.+++++.+++++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 351 ~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~dea 429 (511)
T TIGR01237 351 PSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEA 429 (511)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHH
Confidence 9999999999999999999999999999 889988654335799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhheeeEEEE
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~-~~g~~~l~~~~~~k~~~~ 503 (509)
|+++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+|+ ++|.+++++||+.|+|+.
T Consensus 430 i~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~ 509 (511)
T TIGR01237 430 LEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTE 509 (511)
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999987653 3568999999999995 799999999999999987
Q ss_pred ec
Q 010482 504 GD 505 (509)
Q Consensus 504 ~~ 505 (509)
++
T Consensus 510 ~~ 511 (511)
T TIGR01237 510 NI 511 (511)
T ss_pred eC
Confidence 64
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-100 Score=815.19 Aligned_cols=468 Identities=35% Similarity=0.564 Sum_probs=442.8
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+ +.+++++||+| |+++++++.++.+|++.++++|++||+.|+++|.++|.++|++++++|++++++
T Consensus 33 ~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (512)
T cd07124 33 YPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFE 110 (512)
T ss_pred cceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 468999999974 57899999997 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.+++++..+++..+...+. ..+...+++++|+|||++|+|||||+.+.++++++
T Consensus 111 la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ 189 (512)
T cd07124 111 LAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTA 189 (512)
T ss_pred HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999988775543332 23456789999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc--
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG-- 270 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~-- 270 (509)
||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+++|+.|.+.+++
T Consensus 190 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~ 269 (512)
T cd07124 190 ALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269 (512)
T ss_pred HHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999877889999999999999999999999999999886
Q ss_pred ----CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 271 ----TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 271 ----~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|
T Consensus 270 ~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d 349 (512)
T cd07124 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPED 349 (512)
T ss_pred ccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC--CCceeecEEEecCCCCCcccccccccceEEEEEeCCHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 424 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ 424 (509)
+++++||++++.+++++.++|++++. |+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 350 ~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 428 (512)
T cd07124 350 PEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFD 428 (512)
T ss_pred CCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHH
Confidence 99999999999999999999999988 8999999976532 57999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhheeeEE
Q 010482 425 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYV 501 (509)
Q Consensus 425 eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~ 501 (509)
|||+++|+++|||+++|||+|.+.++++++++++|+||||.+... .+.+||||+|+||+| +++|.+|+++||+.|+|
T Consensus 429 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v 508 (512)
T cd07124 429 EALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508 (512)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEE
Confidence 999999999999999999999999999999999999999986543 357999999999999 88999999999999999
Q ss_pred EEec
Q 010482 502 CLGD 505 (509)
Q Consensus 502 ~~~~ 505 (509)
++++
T Consensus 509 ~~~~ 512 (512)
T cd07124 509 TENF 512 (512)
T ss_pred EEeC
Confidence 8763
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-100 Score=810.80 Aligned_cols=469 Identities=43% Similarity=0.735 Sum_probs=444.5
Q ss_pred eeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
+||||+|+.+.++.+++++||+| ++++++++.++.+|++.++++|++||+.|++++.++|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999765678999999998 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
+++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776655443323344578999999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|.+.++++++|
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999997777899999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 320 (478)
T cd07131 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL 320 (478)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~ 400 (478)
T cd07131 321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA 400 (478)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999997532 257899999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~~ 504 (509)
|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|+||+| +++|.+|+++||+.|+|+++
T Consensus 401 n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 401 NDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 999999999999999999999999999999999987664 578999999999999 88999999999999999875
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-99 Score=805.80 Aligned_cols=469 Identities=32% Similarity=0.487 Sum_probs=442.2
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++||||+|+.+.+++.++++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|.++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999976567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
++++.|+|||+.+++.|+..+++.+++++.......++..+...++...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776665433222344567899999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+++|+.|.+.++.++||
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~ 240 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR 240 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCe
Confidence 9999999999999999999999999999999999999998 456788999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.++++++||+
T Consensus 241 v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~ 319 (477)
T TIGR01722 241 VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPL 319 (477)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~ 399 (477)
T TIGR01722 320 ITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALI 399 (477)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999997531 247899999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|||+++|||+|.+.++++++++++|.||||++... .+.+||||+|.||+| +++|.+++++||+.|++++++
T Consensus 400 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 400 NASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 999999999999999999999999999999999986553 368999999999999 588999999999999998763
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-100 Score=805.89 Aligned_cols=461 Identities=40% Similarity=0.657 Sum_probs=437.5
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 115 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 115 (509)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 48999999875668899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 116 LITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 116 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
++++|+|||..+++ .|+..+++.+++++...+...+... ....++.++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999986 4999999999999988766544321 23457889999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
++||+||+|||+.+|+++..|.++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++.+++|
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 99999999999999999999999999999999999999997778999999999999999999999999999999999999
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|||+++++++||+
T Consensus 236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 315 (466)
T cd07138 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL 315 (466)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
+++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n 395 (466)
T cd07138 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIAN 395 (466)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHh
Confidence 9999999999999999999999999996422 2579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
+++|||+++|||+|.++++++++++++|+||||++. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 396 DTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999999999999999864 4578999999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-99 Score=809.24 Aligned_cols=467 Identities=31% Similarity=0.518 Sum_probs=438.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|++.++++|++||+.|+++|.++|.++|++++++|++++++
T Consensus 37 ~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 114 (514)
T PRK03137 37 YPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHE 114 (514)
T ss_pred cceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 457999999974 5789999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.+++|+..+.+..........++...+++++|+|||++|+|||||+.++++++++
T Consensus 115 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ 194 (514)
T PRK03137 115 FSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLA 194 (514)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999998887654222111224556789999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc--
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG-- 270 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~-- 270 (509)
||++||+||+|||+.+|+++..|.++|.++|+|+|++|+++|++.++++.|++||+|++|.||||+++|+.|++.+++
T Consensus 195 ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~ 274 (514)
T PRK03137 195 AIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQ 274 (514)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999777899999999999999999999999999999886
Q ss_pred ----CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 271 ----TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 271 ----~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 275 ~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~ 354 (514)
T PRK03137 275 PGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPED 354 (514)
T ss_pred ccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+. ++||++++.+++++.+++++++++ +++++||......|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus 355 ~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 432 (514)
T PRK03137 355 NA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHA 432 (514)
T ss_pred cc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHH
Confidence 98 999999999999999999999887 6999999765345799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~ 503 (509)
|+++|+++|||++||||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|.+++++||+.|+|+.
T Consensus 433 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~ 512 (514)
T PRK03137 433 LEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSE 512 (514)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEE
Confidence 9999999999999999999999999999999999999986543 356899999999999 6899999999999999876
Q ss_pred e
Q 010482 504 G 504 (509)
Q Consensus 504 ~ 504 (509)
.
T Consensus 513 ~ 513 (514)
T PRK03137 513 M 513 (514)
T ss_pred e
Confidence 4
|
|
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-99 Score=803.87 Aligned_cols=464 Identities=32% Similarity=0.494 Sum_probs=432.6
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 115 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 115 (509)
+||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++
T Consensus 3 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (487)
T PRK09457 3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE 81 (487)
T ss_pred ceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6999999975 457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhh
Q 010482 116 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195 (509)
Q Consensus 116 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 195 (509)
++++|+|||..+++.|+..+++.+++++.......+.... ..++...+++++|+|||++|+|||||+....+++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 160 (487)
T PRK09457 82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 160 (487)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988877665444322 123456789999999999999999999999999999999
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC-CCe
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK 274 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-~~~ 274 (509)
+||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+++|+.|++.++.+ .++
T Consensus 161 aGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 161 AGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 999999999999999999999999999999999999998 567899999999999999999999999999987755 578
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHHhccccCCCC-CCCcccC
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGF-GEGVVQG 352 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~l~~~~~~~~~G~p~-~~~~~~G 352 (509)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|||+ ++.+++|
T Consensus 240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~G 319 (487)
T PRK09457 240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMG 319 (487)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccC
Confidence 899999999999999999999999999999999999999999999999998 99999999999999999996 7889999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~ 398 (487)
T PRK09457 320 AVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANN 398 (487)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999988654345799999999 69999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+++|||+|.+.++++++++++|+||||.... ..+.+||||+|+||+|+++|..+ .+||+.|+++++
T Consensus 399 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~ 470 (487)
T PRK09457 399 TRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLE 470 (487)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEe
Confidence 999999999999999999999999999999997654 34679999999999999999555 559999998876
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-99 Score=803.33 Aligned_cols=465 Identities=39% Similarity=0.653 Sum_probs=437.9
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh--hhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
+||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+. |+++|.++|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999987655678999999999999999999999999999999999984 999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..++.. |+..+++.+++++...+...+........+...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999988754 99999999999998877654322211112455688999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++| +.+.++.|+.|++++.|.||||+.+|+.|++.+++++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~ 239 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERL 239 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999998 5678999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++|
T Consensus 240 ~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 319 (471)
T cd07139 240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIG 319 (471)
T ss_pred CEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
|++++.+++++.++|++++.+|+++++||.... ..++|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 320 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 399 (471)
T cd07139 320 PLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIA 399 (471)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHH
Confidence 999999999999999999999999999997643 347899999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
|+++|||+++|||+|.+++.++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 400 n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 400 NDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999876 5678999999999999999999999999999986
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-99 Score=798.44 Aligned_cols=461 Identities=38% Similarity=0.590 Sum_probs=432.0
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
..||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|| +.++..+|.++|++++++|++++++|+
T Consensus 5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4799999986 36789999999999999999999999999999998875 578999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCC----CCCCceeEEEeecc-eEEEEEcCCChhHHHHHHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA----TLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~ 189 (509)
+++++|+|||..+++.|+..+++.++|++..+.+..+..... ...+...++.++|+ |||++|+|||||+.+.+++
T Consensus 80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~ 159 (472)
T TIGR03250 80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK 159 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence 999999999999999999999999999998887765543321 11234568999998 9999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.++.|+.||+++.|.||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 239 (472)
T TIGR03250 160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG 239 (472)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999875
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 240 --~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 317 (472)
T TIGR03250 240 --YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSV 317 (472)
T ss_pred --CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (472)
T TIGR03250 318 DMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRI 394 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999965 3789999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCCccCCCCCCCC-CCChHHHHHhhheeeEEEEec
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+|+++|||+++|||+|.++++++++++++|+||||...... +.+||||+|+||+| +++|.+|+++||+.|++++++
T Consensus 395 aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 395 SNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred HhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999765433 56899999999999 568899999999999998763
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-99 Score=799.24 Aligned_cols=455 Identities=40% Similarity=0.663 Sum_probs=433.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 22 ~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (480)
T cd07111 22 FGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLF 101 (480)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 45899999998655678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||+.+++. |+..+++.+++++.+.+...+ .+..++|+|||++|+|||||+.+.++++++
T Consensus 102 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 170 (480)
T cd07111 102 AVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAWKICP 170 (480)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999984 999999999988877764321 134689999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +++..|+.||+++.|+||||+.+|+.|.+.+++++
T Consensus 171 ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~ 249 (480)
T cd07111 171 ALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG 249 (480)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999864 68899999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|
T Consensus 250 ~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 329 (480)
T cd07111 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMG 329 (480)
T ss_pred CcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 330 pli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~ 409 (480)
T cd07111 330 AIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANN 409 (480)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhC
Confidence 99999999999999999999999999998653335799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
++|||+++|||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 410 ~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 410 TPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 99999999999999999999999999999999987777789999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-99 Score=801.20 Aligned_cols=461 Identities=27% Similarity=0.373 Sum_probs=421.0
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHh-hHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|.++|+++|++++++|++++++|
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~l 79 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDL 79 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999986 36789999999999999999876 8999999999997 799999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhc--------cccCCCCCC-ceeEEEeec-ceEEEEEcCCChhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--------EIIPATLPD-RRLFVLKQP-VGVAGAITPWNFPL 183 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P~ 183 (509)
+++ ++|+|||+.+++.|+..+++.++||+..+++..+ ...+...++ ...++.++| +|||++|+|||||+
T Consensus 80 a~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 158 (513)
T cd07128 80 YAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPV 158 (513)
T ss_pred HHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHH
Confidence 996 8999999999999999999999999998876542 111211112 134678999 59999999999999
Q ss_pred HHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC-CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHH
Q 010482 184 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 262 (509)
Q Consensus 184 ~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 262 (509)
.+.++++++||++||+||+|||+.+|+++..|+++|.++| +|+|++|+|+|++.++++.| +.+++|.||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~ 235 (513)
T cd07128 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAA 235 (513)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999998654555443 5689999999999999
Q ss_pred HHHHHh--hcCCCeEEeecCCCCceEEcCCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 010482 263 KLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335 (509)
Q Consensus 263 ~i~~~~--~~~~~~~~lelgG~~~~iV~~daD-----l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~ 335 (509)
+|++.+ +++++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|+++
T Consensus 236 ~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (513)
T cd07128 236 KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKAR 315 (513)
T ss_pred HHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHH
Confidence 999985 478999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc-------CCCCceeecEEEecCCC--CCccc
Q 010482 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS--EMLVS 406 (509)
Q Consensus 336 ~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~~~~ 406 (509)
++++++|||+++++++||++++.+++++.++|++++++ |++++||... ..+|+|++|||+.++++ +|+++
T Consensus 316 ~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 394 (513)
T cd07128 316 LAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVH 394 (513)
T ss_pred HHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHH
Confidence 99999999999999999999999999999999999988 9999999652 13579999999998887 48999
Q ss_pred ccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC---------CCCCCCc
Q 010482 407 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI---------STEVAPF 475 (509)
Q Consensus 407 ~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~--~G~v~iN~~~~---------~~~~~pf 475 (509)
+||+||||++|++|+|+||+|+++|+++|||++||||+|.+++++++++|+ +|+||||.... ..+.+||
T Consensus 395 ~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pf 474 (513)
T cd07128 395 DVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVH 474 (513)
T ss_pred hCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999997 99999997642 2467899
Q ss_pred cCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 010482 476 GGVKQSGLGRE-GSKYGMDEFLEIKYVC 502 (509)
Q Consensus 476 GG~k~SG~G~~-~g~~~l~~~~~~k~~~ 502 (509)
||+|.||+|++ +|.+++++|++.|+|.
T Consensus 475 GG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 475 GGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCcccCCCCcccccHHHHHHhheeeeee
Confidence 99999999999 5799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-99 Score=800.16 Aligned_cols=465 Identities=31% Similarity=0.513 Sum_probs=435.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.+++.|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 16 ~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el 95 (496)
T PLN00412 16 YKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPI 95 (496)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999997656788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhcc--ccCC-----CCCCceeEEEeecceEEEEEcCCChhHHHH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--IIPA-----TLPDRRLFVLKQPVGVAGAITPWNFPLAMI 186 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 186 (509)
++++++|+|||..+++.|+..+++.+++++..+.+..+. ..+. ...+...+++++|+|||++|+|||||+.+.
T Consensus 96 ~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 175 (496)
T PLN00412 96 AECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLA 175 (496)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHH
Confidence 999999999999999999999999999998876665322 1111 011224578999999999999999999999
Q ss_pred HHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHH
Q 010482 187 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 266 (509)
Q Consensus 187 ~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 266 (509)
++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+++|++.++++.|..||+|+.|.|||| ++|+.|++
T Consensus 176 ~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~ 254 (496)
T PLN00412 176 VSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISK 254 (496)
T ss_pred HHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999 99999999
Q ss_pred HhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 267 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 267 ~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.+
T Consensus 255 ~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 332 (496)
T PLN00412 255 KAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED 332 (496)
T ss_pred HhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcc
Confidence 875 899999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
++++||++++.+++++.++|++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 333 -~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~dea 408 (496)
T PLN00412 333 -DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEG 408 (496)
T ss_pred -cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHH
Confidence 789999999999999999999999999999997753 4799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+++++.
T Consensus 409 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 409 IHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL 488 (496)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence 999999999999999999999999999999999999998764 4457999999999999999999999999999998764
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-98 Score=801.14 Aligned_cols=467 Identities=31% Similarity=0.518 Sum_probs=440.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+ +..++++||. ||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++
T Consensus 19 ~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (500)
T cd07083 19 YPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRE 96 (500)
T ss_pred ccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 457999999974 5679999997 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC-CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..+++.|+..+++.+++++..+.+..+.... ....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 97 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 176 (500)
T cd07083 97 LIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIV 176 (500)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999998776554321 112345678899999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|.+.++++
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~ 256 (500)
T cd07083 177 APVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARL 256 (500)
T ss_pred HHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999997788999999999999999999999999999999988
Q ss_pred C------CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 272 V------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 272 ~------~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|||.
T Consensus 257 ~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (500)
T cd07083 257 APGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPE 336 (500)
T ss_pred cccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 6 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC--CH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TE 423 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~ 423 (509)
++++++||++++.+++++.+++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+ |+
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~ 415 (500)
T cd07083 337 ENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDF 415 (500)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCH
Confidence 99999999999999999999999999887 9999997654457999999999999999999999999999999999 99
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCCccCCCCCCCC-CCChHHHHHhhheeeE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLEIKY 500 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~ 500 (509)
||||+++|+++|||+++|||+|.+.+.++++++++|+|+||++.... +.+||||+|.||+| +++|.+++++||+.|+
T Consensus 416 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~ 495 (500)
T cd07083 416 AEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKA 495 (500)
T ss_pred HHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeE
Confidence 99999999999999999999999999999999999999999876543 57899999999999 6899999999999999
Q ss_pred EEE
Q 010482 501 VCL 503 (509)
Q Consensus 501 ~~~ 503 (509)
++.
T Consensus 496 ~~~ 498 (500)
T cd07083 496 VAE 498 (500)
T ss_pred EEE
Confidence 865
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-99 Score=793.27 Aligned_cols=449 Identities=39% Similarity=0.604 Sum_probs=427.8
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++||+||+++++++.++.+|+++|++.|++||+. |+. +..+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHH
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~ 210 (509)
|+..+++.++||+...+...+...+. .++...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999999888776654332 23456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 211 TALAAAELALQ-AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 211 ~~~~l~~~l~~-aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
++..++++|.+ +|+|+|++|+++|++.++++.|++||+++.|.||||+++|+.|++.++++++++++|+|||||+||++
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~ 238 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD 238 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence 99999999999 79999999999997778899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 370 AVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~ 398 (455)
T cd07120 319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL 398 (455)
T ss_pred HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 9999999999876432 2578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 447 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+.++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|++++
T Consensus 399 ~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 399 ARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 999999999999999999987777789999999999999999999999999999864
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-98 Score=794.43 Aligned_cols=450 Identities=36% Similarity=0.608 Sum_probs=428.5
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 132 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 132 (509)
++||+||+++++++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH
Q 010482 133 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~ 212 (509)
..+++.+++++.....+.+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999988777666544332 245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCC
Q 010482 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292 (509)
Q Consensus 213 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daD 292 (509)
..+++++.++ +|+|++|+++|++.++++.|+.||++++|.||||+++|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad 238 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence 9999999985 999999999997777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 293 LNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 293 l~~a~~~i~~~~-~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
++.|++.+++++ |.++||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.++|++++
T Consensus 239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 318 (456)
T cd07107 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK 318 (456)
T ss_pred HHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence 999999999995 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 372 SKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 398 (456)
T cd07107 319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398 (456)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence 99999999997532 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 399 QAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999887778899999999999999999999999999999874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-98 Score=794.51 Aligned_cols=450 Identities=45% Similarity=0.710 Sum_probs=428.7
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 132 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 132 (509)
++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhc---cccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCH
Q 010482 133 DYGAKFIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p 209 (509)
..+++.+++++...+.+.. ...+...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999998877642 2222222355678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 210 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
+++..+.++|.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+++|+.|.+.++++++|+++|+|||||+||++
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~ 240 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence 99999999999999999999999997778899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++++||++++.+++++.+++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~ 320 (456)
T cd07110 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR 320 (456)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 370 AVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++.+|+++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus 321 a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~ 400 (456)
T cd07110 321 GKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAE 400 (456)
T ss_pred HHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999997643 35789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
+++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 401 ~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 401 RCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999999999987766788999999999999999999999999999874
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-98 Score=792.04 Aligned_cols=450 Identities=42% Similarity=0.685 Sum_probs=429.3
Q ss_pred ecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhH
Q 010482 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131 (509)
Q Consensus 54 ~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 131 (509)
+||+||+++++++.++.+|+++|++.|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 689999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~ 211 (509)
++.+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999988777655433322234556889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 212 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+..+.++|.++|+|+|++|+++|++.++++.|++||+++.|.||||+++|+.|.+.++++++++++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 99999999999999999999999777789999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.++|++++
T Consensus 242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 321 (454)
T cd07118 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR 321 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 372 SKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 322 ~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~ 401 (454)
T cd07118 322 AEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTAL 401 (454)
T ss_pred hCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHH
Confidence 99999999998653 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++++++|.|+||++....+.+||||+|+||+|+++|.+++++||+.|++++
T Consensus 402 ~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~~ 454 (454)
T cd07118 402 TVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVHL 454 (454)
T ss_pred HHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 99999999999999988777889999999999999999999999999999853
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-98 Score=793.12 Aligned_cols=451 Identities=47% Similarity=0.741 Sum_probs=428.2
Q ss_pred EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 51 ~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCC----CCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~ 206 (509)
|+..+++.+++++.....+.+...+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999887766554332211 134567889999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceE
Q 010482 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286 (509)
Q Consensus 207 ~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 286 (509)
.+|+++..+.++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i 240 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence 99999999999999999999999999997788999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHH
Q 010482 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 287 V~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 320 (456)
T cd07145 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL 320 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 367 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 367 i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
+++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 321 i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 398 (456)
T cd07145 321 VNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDI 398 (456)
T ss_pred HHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999999999764 379999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 447 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++++++++++|+||||++... .+.+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 399 ~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 399 NRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 99999999999999999987643 3679999999999999999999999999999864
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-98 Score=792.50 Aligned_cols=465 Identities=32% Similarity=0.501 Sum_probs=432.3
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 115 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 115 (509)
+||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4899999875 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhh
Q 010482 116 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195 (509)
Q Consensus 116 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 195 (509)
++++|+|||..+++.|+..+++.+++++.......+..... .++...++.++|+|||++|+|||||+...++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887776655543221 23345688899999999999999999999999999999
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC-CCe
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK 274 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-~~~ 274 (509)
+||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|++||+|+.|+||||+++|+.|++.++++ .++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~ 237 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKI 237 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCc
Confidence 999999999999999999999999999999999999998 567899999999999999999999999999988765 678
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHHhccccCCC-CCCCcccC
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDG-FGEGVVQG 352 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~l~~~~~~~~~G~p-~~~~~~~G 352 (509)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .++++++|
T Consensus 238 ~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~g 317 (484)
T TIGR03240 238 LALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMG 317 (484)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCccc
Confidence 999999999999999999999999999999999999999999999999985 9999999999999999997 57889999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.+++++++++|+++++||...+.+++|++|||+ +++++|++++||+||||++|++|+|+||||+++|+
T Consensus 318 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~ 396 (484)
T TIGR03240 318 AVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANN 396 (484)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999988654345789999999 69999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|||+++|||+|.++++++++++++|+||||.... ..+.+||||+|.||+|+++|.++++ ||+.|+++++.
T Consensus 397 ~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 397 TRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 999999999999999999999999999999997654 3467999999999999999976666 99999998873
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-98 Score=790.44 Aligned_cols=450 Identities=43% Similarity=0.715 Sum_probs=430.3
Q ss_pred EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 51 ~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHH
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~ 210 (509)
|+..+++.+++++...++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999999888776654443334566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 211 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++..|.++|.++|+|+|++|+++|++.++++.|+.|++|++|.||||+.+|+.|++.++++++++++|+|||||+||++|
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 99999999999999999999999977789999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a 370 (509)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 320 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 371 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 371 ~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
+.+|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 321 ~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~ 397 (451)
T cd07150 321 VAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAF 397 (451)
T ss_pred HhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHH
Confidence 9999999999864 3789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCC-CCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 451 RVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++++++|+|+||++.... +.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 398 ~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 398 KLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 99999999999999887643 679999999999999999999999999999863
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-98 Score=788.52 Aligned_cols=448 Identities=35% Similarity=0.519 Sum_probs=423.1
Q ss_pred EeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHh-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 52 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 52 ~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
+++||.||+++++++.++.+|++.|+++|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCC----CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~ 206 (509)
|+..+++.+++++.......+...+.. .++...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999998877665433221 1244578899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceE
Q 010482 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286 (509)
Q Consensus 207 ~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 286 (509)
.+|+++..|.++|.++|+|+|++|+++|+ .+.++.|+.||+|+.|.||||+++|+.|++.++. .+|+++|+|||||+|
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~i 239 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVI 239 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceE
Confidence 99999999999999999999999999985 4679999999999999999999999999999876 489999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHH
Q 010482 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 287 V~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.++
T Consensus 240 V~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 319 (455)
T cd07148 240 VDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEW 319 (455)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 367 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 367 i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
+++++.+|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~ 397 (455)
T cd07148 320 VNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397 (455)
T ss_pred HHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999999765 468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCC-CCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 447 QRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+++.++++++++|+||||++.... +.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 398 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 398 DVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 999999999999999999876433 568999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-98 Score=798.00 Aligned_cols=466 Identities=40% Similarity=0.616 Sum_probs=437.3
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
+++|.+.|-. ++.+++++||+||+++++++.++.+|++.|+++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 20 ~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela 97 (524)
T PRK09407 20 RRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELL 97 (524)
T ss_pred HHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5677777654 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC-CCCC-CceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
+++++|+|||..++..|+..++..+++++..+....+.... ...+ ....+..++|+|||++|+|||||+...++++++
T Consensus 98 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ 177 (524)
T PRK09407 98 DLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIP 177 (524)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999888776543221 1111 246788999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|++| ++.|+||||+++|+.|++.+++++
T Consensus 178 ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~~ 255 (524)
T PRK09407 178 ALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRRL 255 (524)
T ss_pred HHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999878889999986 678999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 256 ~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G 335 (524)
T PRK09407 256 IGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMG 335 (524)
T ss_pred CcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
|++++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 336 pli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N 415 (524)
T PRK09407 336 SLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERAN 415 (524)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHh
Confidence 999999999999999999999999999997432 3579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC---CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~---~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+++|||+++|||+|.++++++++++++|.||||++.. .++.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 416 ~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 491 (524)
T PRK09407 416 DTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ 491 (524)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEc
Confidence 9999999999999999999999999999999998654 346789999999999999999999999999999876
|
|
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-99 Score=797.48 Aligned_cols=458 Identities=47% Similarity=0.776 Sum_probs=433.4
Q ss_pred eeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 010482 42 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ 121 (509)
Q Consensus 42 ~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 121 (509)
|+++.+ ++++++||.||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 777644 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEE
Q 010482 122 GKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 201 (509)
Q Consensus 122 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vV 201 (509)
|||+.+++.|+..+++.+++++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999999877765554 36788899999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCC
Q 010482 202 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 281 (509)
Q Consensus 202 lkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG 281 (509)
+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.||+++.|.||||+++|+.|.+.++++++|+++|+||
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG 238 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG 238 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred CCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHH
Q 010482 282 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 361 (509)
Q Consensus 282 ~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~ 361 (509)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++
T Consensus 239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~ 318 (462)
T PF00171_consen 239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRE 318 (462)
T ss_dssp EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHH
T ss_pred cceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCEEEeCCc---ccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcE
Q 010482 362 KVETFVEDAVSKGAKVLLGGR---RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438 (509)
Q Consensus 362 ~~~~~i~~a~~~Ga~~~~gg~---~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~ 438 (509)
++.+++++++.+||++++||. .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 319 ~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 398 (462)
T PF00171_consen 319 RVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLT 398 (462)
T ss_dssp HHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESE
T ss_pred hcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCce
Confidence 999999999999999999992 22256799999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHhhccceEEEECCCCCCCCC-CCccCCCCCCCCCCChHHHHHhhheeeEE
Q 010482 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYV 501 (509)
Q Consensus 439 asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~-~pfGG~k~SG~G~~~g~~~l~~~~~~k~~ 501 (509)
++|||+|.++++++++++++|+||||++...... +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 399 a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 399 ASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred eEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999998775544 69999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-98 Score=811.09 Aligned_cols=462 Identities=25% Similarity=0.360 Sum_probs=422.0
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHh-hHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+.+ .+.+++++||+||+++++++.++ .|+++|+++|++| |+.|+++|..+|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999986 35789999999999999999999 6999999999996 999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhh--------ccccCCCCCC-ceeEEEeecc-eEEEEEcCCChhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNFPL 183 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P~ 183 (509)
++ +++|+|||+.+++.|+..+++.+++|+..+++.. ++..+...++ ...++.++|+ |||++|+|||||+
T Consensus 80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence 99 5999999999999999999999999999887632 3322221112 2467899998 9999999999999
Q ss_pred HHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC-CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHH
Q 010482 184 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 262 (509)
Q Consensus 184 ~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 262 (509)
.++++++++||++||+||+|||+.+|+++..|.++|.++| +|+|++|+|+|+..+ .+..+++++.|+||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~~---~~~~~~~~~~V~FTGS~~~G~ 235 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGD---LLDHLDHRDVVAFTGSAATAD 235 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChHH---HHhcCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 999999999985333 233346789999999999999
Q ss_pred HHHHHh--hcCCCeEEeecCCCCceEEcCCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 010482 263 KLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335 (509)
Q Consensus 263 ~i~~~~--~~~~~~~~lelgG~~~~iV~~daD-----l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~ 335 (509)
+|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 236 ~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (663)
T TIGR02278 236 RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQAR 315 (663)
T ss_pred HHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHH
Confidence 999874 478999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCC-cccccccccce
Q 010482 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVFGPV 414 (509)
Q Consensus 336 ~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~-~~~~eE~fgPv 414 (509)
++++++|+|+++++++||++++.+++++.++|++++++|+++++||... .+|+|++|||+.+++++| ++++||+||||
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~FGPV 394 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAFGPV 394 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccccCCe
Confidence 9999999999999999999999999999999999999999999999764 357999999999999886 79999999999
Q ss_pred EEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEE-CCC-------C-CCCCCCCccCCCCCCC
Q 010482 415 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGV-NEG-------L-ISTEVAPFGGVKQSGL 483 (509)
Q Consensus 415 ~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l--~~G~v~i-N~~-------~-~~~~~~pfGG~k~SG~ 483 (509)
++|++|+|.||||+++|+++|||++||||+|.+.+++++++| ++|+||| |.+ . ...+.+||||+|+||+
T Consensus 395 l~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~ 474 (663)
T TIGR02278 395 ATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGG 474 (663)
T ss_pred EEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcC
Confidence 999999999999999999999999999999999999999999 8999999 642 1 1236789999999999
Q ss_pred CCC-ChHHHHHhhheeeEEEE
Q 010482 484 GRE-GSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 484 G~~-~g~~~l~~~~~~k~~~~ 503 (509)
|++ +|.+++++|++.|+|..
T Consensus 475 G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 475 GEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCccchHHHHHHhceeEEEEc
Confidence 999 57899999999999864
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-97 Score=787.57 Aligned_cols=450 Identities=44% Similarity=0.705 Sum_probs=429.1
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 132 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 132 (509)
++||+||+++++++.++.+|++.+++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH
Q 010482 133 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~ 212 (509)
..+++.+++++...+.+.+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999998877655433322 245678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCC
Q 010482 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292 (509)
Q Consensus 213 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daD 292 (509)
..+.++|.++|+|+|++|+|+|++ ++++.|+.|+++++|.||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAd 238 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDAD 238 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCC
Confidence 999999999999999999999854 6889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 010482 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372 (509)
Q Consensus 293 l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 372 (509)
++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.++|++++.
T Consensus 239 l~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 318 (457)
T cd07090 239 LENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQ 318 (457)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCcccC-----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 373 KGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 373 ~Ga~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
+|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus 319 ~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~ 398 (457)
T cd07090 319 EGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ 398 (457)
T ss_pred CCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHH
Confidence 9999999997532 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
.++++++++++|+||||++....+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 399 RAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 999999999999999999877778899999999999999999999999999999775
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=786.47 Aligned_cols=451 Identities=41% Similarity=0.648 Sum_probs=428.4
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG- 130 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 130 (509)
++||+||+++++++.++.+|+++++++|++||+.|+ ++|..+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 999999999999999999999999999999999999987754
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccc-CCC---CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEII-PAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~ 206 (509)
|+..+++.+++++....+..+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999998877655432 211 1245678999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceE
Q 010482 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286 (509)
Q Consensus 207 ~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 286 (509)
.+|.++..+.++|.++|+|+|++|+++|++.+++..|+.||+++.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 99999999999999999999999999998777899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHH
Q 010482 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 287 V~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~ 320 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY 320 (459)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC
Q 010482 367 VEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 444 (509)
Q Consensus 367 i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~ 444 (509)
+++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 321 i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~ 400 (459)
T cd07089 321 IARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSA 400 (459)
T ss_pred HHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcC
Confidence 9999999999999997643 25799999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 445 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
|.++++++++++++|+|+||++...++.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 401 d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 401 DVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 99999999999999999999888777889999999999999999999999999999863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-97 Score=785.73 Aligned_cols=449 Identities=41% Similarity=0.660 Sum_probs=426.7
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 131 (509)
++||+||+++++++.++.+|++.++++|++||+.|. ++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~ 211 (509)
+..+++.+++++...++..+...+.. ++...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999988877665443322 34567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 212 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+..|.++|.++|+|+|++|+++|++.+.++.|+.||+++.|.||||+++|+.|.+.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 99999999999999999999999777889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++++++++.++|++++
T Consensus 240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~ 318 (454)
T cd07109 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARAR 318 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986 689999999999999999999999
Q ss_pred HCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q 010482 372 SKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~ 448 (509)
.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++
T Consensus 319 ~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~ 398 (454)
T cd07109 319 ARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDR 398 (454)
T ss_pred hCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHH
Confidence 99999999987542 357899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceEEEECCCC-CCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 449 TWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 449 ~~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+.++++++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 399 ~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 454 (454)
T cd07109 399 ALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454 (454)
T ss_pred HHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence 9999999999999999876 456789999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-97 Score=784.05 Aligned_cols=450 Identities=44% Similarity=0.730 Sum_probs=429.9
Q ss_pred ecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HH
Q 010482 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EV 132 (509)
Q Consensus 54 ~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev 132 (509)
+||+||+++++++.++.++++++++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999974 99
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH
Q 010482 133 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~ 212 (509)
..+++.+++++.+.++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 9999999999998877665443322 345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCC
Q 010482 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292 (509)
Q Consensus 213 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daD 292 (509)
..+.++|.++|+|+|++++|+|++.++++.|+.||+++.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd 240 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence 99999999999999999999997778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 010482 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372 (509)
Q Consensus 293 l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 372 (509)
++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHH
Q 010482 373 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452 (509)
Q Consensus 373 ~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~ 452 (509)
+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++
T Consensus 321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~ 400 (453)
T cd07115 321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV 400 (453)
T ss_pred CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence 99999999976433578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 453 ~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++++++|+|+||++....+.+||||+|+||+|+++|.+|+++|++.|+++++
T Consensus 401 ~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 401 AAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999998777778899999999999999999999999999999774
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-97 Score=784.38 Aligned_cols=454 Identities=42% Similarity=0.692 Sum_probs=431.3
Q ss_pred CeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 010482 49 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 126 (509)
Q Consensus 49 ~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 126 (509)
.+++++||+||+++++++.++.+|++++++.|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4689999999999999999999999999999999997 59999999999999999999999999999999999999999
Q ss_pred HHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCC
Q 010482 127 EAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 205 (509)
Q Consensus 127 ~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps 205 (509)
+++. |+..+++.++|++...+...+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPT-GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9975 99999999999999887766543332 234567789999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh-cCCCeEEeecCCCCc
Q 010482 206 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAP 284 (509)
Q Consensus 206 ~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-~~~~~~~lelgG~~~ 284 (509)
+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.|++++.|.||||+++|+.|++.++ .++||+++|+||+||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~ 240 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence 9999999999999999999999999999987889999999999999999999999999999988 489999999999999
Q ss_pred eEEcCCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHH
Q 010482 285 CIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 363 (509)
Q Consensus 285 ~iV~~da-Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~ 363 (509)
+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.+++++
T Consensus 241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 320 (462)
T cd07112 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV 320 (462)
T ss_pred EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 010482 364 ETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 441 (509)
Q Consensus 364 ~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv 441 (509)
.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|
T Consensus 321 ~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i 400 (462)
T cd07112 321 LGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASV 400 (462)
T ss_pred HHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEE
Confidence 9999999999999999997542 24789999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 442 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 401 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 462 (462)
T cd07112 401 WTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI 462 (462)
T ss_pred EcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEEC
Confidence 99999999999999999999999987777889999999999999999999999999999863
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-97 Score=782.19 Aligned_cols=445 Identities=43% Similarity=0.651 Sum_probs=423.3
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 132 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 132 (509)
++||+||+++++++.++.+|++.++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH
Q 010482 133 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~ 212 (509)
..+++.+++++.... .+...+ ..++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIE-DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCcccc-CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999987763 222222 12345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCC
Q 010482 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292 (509)
Q Consensus 213 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daD 292 (509)
..++++|.++ +|+|++|+++| +.++++.|++|++++.|.||||+++|+.|.+.++++++++++|+|||||+||++|||
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dAD 235 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD 235 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCC
Confidence 9999999996 99999999998 456889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 010482 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372 (509)
Q Consensus 293 l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 372 (509)
++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.
T Consensus 236 l~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ 315 (446)
T cd07106 236 IDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKA 315 (446)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHH
Q 010482 373 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452 (509)
Q Consensus 373 ~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~ 452 (509)
+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 316 ~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~ 395 (446)
T cd07106 316 KGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAV 395 (446)
T ss_pred CCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 99999999976533578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 453 ~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+
T Consensus 396 ~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 396 ARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999999998877789999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-97 Score=782.81 Aligned_cols=448 Identities=39% Similarity=0.622 Sum_probs=422.3
Q ss_pred ecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHH
Q 010482 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 133 (509)
Q Consensus 54 ~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 133 (509)
.||.||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccc-CCCCC-CceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH
Q 010482 134 YGAKFIEFYAEEAKRVYGEII-PATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211 (509)
Q Consensus 134 ~~~~~l~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~ 211 (509)
.++..+++++....+..+... +...+ ....+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 999999999988776544322 11111 2456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 212 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+..|.++|.++|+|+|++|+++|++.+.++.|++|+ +.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~--~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dA 238 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNA--DYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhCC--CEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCC
Confidence 999999999999999999999998888899999875 679999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+++++++
T Consensus 239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~ 318 (454)
T cd07101 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAV 318 (454)
T ss_pred CHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 372 SKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
++|+++++||.... .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus 319 ~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~ 398 (454)
T cd07101 319 AKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGR 398 (454)
T ss_pred HCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99999999986532 35789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCC---CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 451 RVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~---~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 399 RIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 999999999999998654 34679999999999999999999999999999864
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-97 Score=779.63 Aligned_cols=431 Identities=28% Similarity=0.414 Sum_probs=402.5
Q ss_pred CCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHH
Q 010482 68 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEA 146 (509)
Q Consensus 68 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~ 146 (509)
....|++.|+++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+|||..+++. |+..+++.++|+++..
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999976 9999999999999988
Q ss_pred Hhhhcccc---CCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC
Q 010482 147 KRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 223 (509)
Q Consensus 147 ~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG 223 (509)
++..+... .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 76655211 1111234568999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHH
Q 010482 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 303 (509)
Q Consensus 224 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~ 303 (509)
+|+|++|+|+|. .+.+..|+. +++++|+||||+++|+.|++.++++++|+++|||||||+||++|||++.|++.++++
T Consensus 166 lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g 243 (484)
T PLN02174 166 LDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAG 243 (484)
T ss_pred CCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 999999999984 455677776 899999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-hccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCc
Q 010482 304 KF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 382 (509)
Q Consensus 304 ~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~ 382 (509)
+| .|+||.|++++|+|||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||.
T Consensus 244 ~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~ 321 (484)
T PLN02174 244 KWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGE 321 (484)
T ss_pred HhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCC
Confidence 99 59999999999999999999999999999999999999988 78999999999999999999998 78999999997
Q ss_pred ccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 010482 383 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 462 (509)
Q Consensus 383 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~ 462 (509)
.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.||
T Consensus 322 ~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~ 400 (484)
T PLN02174 322 KD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400 (484)
T ss_pred cC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEE
Confidence 53 35799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCCC--CCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 463 VNEGLIST--EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 463 iN~~~~~~--~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||++.... +.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 401 IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 401 VNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred ECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99876543 6789999999999999999999999999999875
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-97 Score=783.09 Aligned_cols=447 Identities=44% Similarity=0.710 Sum_probs=425.8
Q ss_pred EeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhH
Q 010482 52 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131 (509)
Q Consensus 52 ~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 131 (509)
+++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|.++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 81 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARVE 81 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCC----CCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCC
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 207 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~ 207 (509)
+..+++.+++++....+..+...+... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 82 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~ 161 (453)
T cd07094 82 VDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999988777655433221 2455678899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEE
Q 010482 208 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 287 (509)
Q Consensus 208 ~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 287 (509)
+|+++..++++|.++|+|+|++++++|++.++++.|++||+++.|.||||+++|+.|.+.+ +++++++|+|||||+||
T Consensus 162 ~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV 239 (453)
T cd07094 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIV 239 (453)
T ss_pred chHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEE
Confidence 9999999999999999999999999998778899999999999999999999999999988 58999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 288 ~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++.+||++++.+++++.+++
T Consensus 240 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 319 (453)
T cd07094 240 DRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWV 319 (453)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 320 ~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (453)
T cd07094 320 EEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLN 396 (453)
T ss_pred HHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHH
Confidence 9999999999999864 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 448 RTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+++++++++++|+||||++... .+.+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 397 ~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 397 VAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred HHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence 9999999999999999987654 4789999999999999999999999999999863
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-97 Score=781.76 Aligned_cols=449 Identities=33% Similarity=0.519 Sum_probs=427.2
Q ss_pred ecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHH
Q 010482 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 133 (509)
Q Consensus 54 ~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 133 (509)
+||+||+++++++.++.+|++.+++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHH
Q 010482 134 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213 (509)
Q Consensus 134 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~ 213 (509)
.+++.+++++...++..+........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999998887665443222223455788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCH
Q 010482 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL 293 (509)
Q Consensus 214 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl 293 (509)
.|.++|.++|+|+|++|+|+|++ +.+..|+.||+|+.|.||||+++|+.|++.++++++++++|+|||||+||++|||+
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl 239 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL 239 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCH
Confidence 99999999999999999999966 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC
Q 010482 294 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 373 (509)
Q Consensus 294 ~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 373 (509)
+.|++.+++++|+++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+
T Consensus 240 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 319 (452)
T cd07102 240 DAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK 319 (452)
T ss_pred HHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 374 GAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 374 Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 320 ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 320 GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 999999997531 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++++++|+||||++...++.+||||+|+||+|+++|.+|+++||+.|++++
T Consensus 400 ~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 452 (452)
T cd07102 400 ALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL 452 (452)
T ss_pred HHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence 99999999999999987777789999999999999999999999999999863
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-97 Score=787.69 Aligned_cols=463 Identities=25% Similarity=0.353 Sum_probs=419.8
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhh-HhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+.+ ++.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|..+|.++|++++++|++++++|
T Consensus 6 ~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 83 (521)
T PRK11903 6 ANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAY 83 (521)
T ss_pred hhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999975 356899999999999999997 8899999999999995 99999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCC--------CCceeEEEeec-ceEEEEEcCCChhHH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL--------PDRRLFVLKQP-VGVAGAITPWNFPLA 184 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~i~p~n~P~~ 184 (509)
++++++|+|||+.+++.|+..+++.++||+.++..+.+....... +....++.++| +|||++|+|||||+.
T Consensus 84 a~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 163 (521)
T PRK11903 84 YDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAW 163 (521)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHH
Confidence 999999999999999999999999999999988766443211100 12234678899 699999999999999
Q ss_pred HHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC-CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHH
Q 010482 185 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 263 (509)
Q Consensus 185 ~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 263 (509)
+.++++++||++||+||+|||+.+|+++..|.+++.++| +|+|++|+|+|++.++++.| ++++.|+||||+++|+.
T Consensus 164 ~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~~ 240 (521)
T PRK11903 164 GLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAAV 240 (521)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHHH
Confidence 999999999999999999999999999999999999999 99999999998766665554 78999999999999999
Q ss_pred HHHHh--hcCCCeEEeecCCCCceEEcCCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHH
Q 010482 264 LMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 336 (509)
Q Consensus 264 i~~~~--~~~~~~~~lelgG~~~~iV~~daD-----l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~ 336 (509)
|++.+ +.+++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|++++
T Consensus 241 v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~ 320 (521)
T PRK11903 241 LRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARL 320 (521)
T ss_pred HHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHH
Confidence 99964 478999999999999999999999 59999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC------CCCceeecEEEecCCC--CCccccc
Q 010482 337 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKS--EMLVSRE 408 (509)
Q Consensus 337 ~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~--~~~~~~e 408 (509)
+++++|+|+++++++||++++.+++++.++|+.. .+|+++++||.... .+|+|++|||+.++++ ++++++|
T Consensus 321 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~e 399 (521)
T PRK11903 321 AKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDV 399 (521)
T ss_pred HhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhC
Confidence 9999999999999999999999999999999964 57999999996521 2478999999987554 4789999
Q ss_pred ccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCC---------CCCCCCccC
Q 010482 409 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI---------STEVAPFGG 477 (509)
Q Consensus 409 E~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l--~~G~v~iN~~~~---------~~~~~pfGG 477 (509)
|+||||++|++|+|+||+|+++|+++|||++||||+|.+++++++++| ++|+||||+... ..+.+||||
T Consensus 400 E~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG 479 (521)
T PRK11903 400 EVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGG 479 (521)
T ss_pred cccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999 899999997532 345789999
Q ss_pred CCCCCCCCC-ChHHHHHhhheeeEEEE
Q 010482 478 VKQSGLGRE-GSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 478 ~k~SG~G~~-~g~~~l~~~~~~k~~~~ 503 (509)
+|.||+|++ +|.+++++||+.|+|..
T Consensus 480 ~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 480 PGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCcCcCCcccccHHHHHHHhccceeeC
Confidence 999999999 55899999999887753
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-96 Score=782.05 Aligned_cols=466 Identities=39% Similarity=0.609 Sum_probs=441.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcC-CHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL-TAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
+++||||+|+.+. +.+++++||+||+++++++.++.+|+++|+++|++||+.|+++ |.++|.++|+++++.|++++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999864 6889999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCC----CCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
|++++++|+|||..+++.|+..+++.++++++..+.+.+...+... .+...++.++|+|||++|+|||||+...++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 9999999999999999999999999999999988777655433211 245568899999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++|++.++++.|+.|++++.|+||||+++|+.|.+.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998778899999999999999999999999999987
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|+|.+++
T Consensus 241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 318 (473)
T cd07082 241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNG 318 (473)
T ss_pred C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.+++++++.+|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 319 ~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~ 396 (473)
T cd07082 319 VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE 396 (473)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999764 379999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.+.++++++++++|+||||++... .+.+||||+|.||+|+++|.+|+++||+.|+++++
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence 99999999999999999999999999999999999987654 35789999999999999999999999999999763
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-96 Score=787.15 Aligned_cols=466 Identities=32% Similarity=0.432 Sum_probs=435.6
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
..||+|+|.. ++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 111 (518)
T cd07125 34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGEL 111 (518)
T ss_pred CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4699999984 578999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||+.+++.|+..+++.+++++...++..+........+...+++++|+|||++|+|||||+...++++++|
T Consensus 112 a~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~A 191 (518)
T cd07125 112 IALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAA 191 (518)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877554321111124567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC--
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-- 271 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-- 271 (509)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++.+++..|+.|++++.|+||||+++|+.|++.++++
T Consensus 192 LaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~ 271 (518)
T cd07125 192 LAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDG 271 (518)
T ss_pred HHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccC
Confidence 999999999999999999999999999999999999999997767899999999999999999999999999998855
Q ss_pred -CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 272 -VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 272 -~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++++
T Consensus 272 ~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 351 (518)
T cd07125 272 PILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTD 351 (518)
T ss_pred CCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC--CHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIH 428 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~~eai~ 428 (509)
+||++++.+++++.+++++++. ++++++||.....+|+|++|||+.++ +|++++||+||||++|++|+ |+||||+
T Consensus 352 ~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~ 428 (518)
T cd07125 352 VGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIE 428 (518)
T ss_pred cCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHH
Confidence 9999999999999999999987 56899998754225799999999888 89999999999999999999 9999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~-~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.+.++++++++++|+||||++... .+.+||||+|.||+|+ ++|.+++++||+.|+|+++.
T Consensus 429 ~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 429 DINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence 99999999999999999999999999999999999987653 3578999999999995 68999999999999998864
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-96 Score=777.95 Aligned_cols=451 Identities=45% Similarity=0.727 Sum_probs=429.0
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++||.||+++++++.++.+|+++++++|++|++ .|+++|.++|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHH
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~ 210 (509)
|+..+++.+++++...+...+...+...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999998877665543333223456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 211 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++..|+++|.++|+|+|+||+++|++.+.++.|+.|+++++|.||||+++|+.|.+.++++++|+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 240 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence 99999999999999999999999977778999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a 370 (509)
||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 371 VSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 371 ~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
+++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 999999999997642 2478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 447 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 999999999999999999877777889999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-96 Score=775.64 Aligned_cols=449 Identities=44% Similarity=0.685 Sum_probs=426.0
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GE 131 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 131 (509)
++||+||+++++++.++.+|++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998875 59
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~ 211 (509)
+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999988776655433222234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 212 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+..|.++|.+ |+|+|++|+++|++.++++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA 239 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence 9999999999 999999999999777789999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++.
T Consensus 240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 319 (450)
T cd07092 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP 319 (450)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q 010482 372 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~ 451 (509)
+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+++++
T Consensus 320 -~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~ 398 (450)
T cd07092 320 -AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMR 398 (450)
T ss_pred -cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 9999999997653457999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 452 ~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+++++++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++
T Consensus 399 ~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 450 (450)
T cd07092 399 LSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450 (450)
T ss_pred HHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEeC
Confidence 9999999999999887777889999999999999999999999999999863
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-96 Score=806.66 Aligned_cols=464 Identities=26% Similarity=0.360 Sum_probs=421.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHh-hHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
+.++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|..+|+++|++++++|+++++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4568999999986 56789999999999999999987 6999999999998 7999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhh--------ccccCCCCCC-ceeEEEeecc-eEEEEEcCCCh
Q 010482 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNF 181 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~n~ 181 (509)
+|++ +++|+|||+.+++.|+..+++.+++|+..+++.. ++..+...++ ...++.++|+ |||++|+||||
T Consensus 82 ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNf 160 (675)
T PRK11563 82 ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNF 160 (675)
T ss_pred HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCch
Confidence 9998 5899999999999999999999999999876542 2222211112 2246888997 99999999999
Q ss_pred hHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC-CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHH
Q 010482 182 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 260 (509)
Q Consensus 182 P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~ 260 (509)
|+...++++++||++||+||+|||+.+|+++..|.+++.++| +|+|++|+|+|+..+ .+..++.+++|.||||+++
T Consensus 161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~~---~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGD---LLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHHH---HhhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 999999999985332 3333467999999999999
Q ss_pred HHHHHHH--hhcCCCeEEeecCCCCceEEcCCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHH
Q 010482 261 GKKLMAG--AAGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333 (509)
Q Consensus 261 g~~i~~~--~~~~~~~~~lelgG~~~~iV~~daD-----l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~ 333 (509)
|+.|++. ++.+++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~ 317 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALR 317 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHH
Confidence 9999985 4588999999999999999999995 99999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc-------CCCCceeecEEEecCCC--CCc
Q 010482 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS--EML 404 (509)
Q Consensus 334 ~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~~ 404 (509)
++++++++|+|+++++++||++++.+++++.++|++++++ |++++||... ..+|+|++|||+.++++ +++
T Consensus 318 ~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 318 ARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 9999999999999999999999999999999999999998 9999999531 12479999999999998 579
Q ss_pred ccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCC--------CC-CCCC
Q 010482 405 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGL--------IS-TEVA 473 (509)
Q Consensus 405 ~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~--~G~v~iN~~~--------~~-~~~~ 473 (509)
+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++++|+ +|+||||..+ .. .+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999997 9999999742 11 2678
Q ss_pred CccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 010482 474 PFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 474 pfGG~k~SG~G~~-~g~~~l~~~~~~k~~~~ 503 (509)
||||+|.||+|++ +|.+++++|++.|+|.+
T Consensus 477 pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 477 VHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 9999999999999 57999999999998854
|
|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-96 Score=775.78 Aligned_cols=447 Identities=41% Similarity=0.659 Sum_probs=422.1
Q ss_pred EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 51 ~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCC----CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~ 206 (509)
|+..++..+++++....+..++..+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999988776554432211 1244567889999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceE
Q 010482 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286 (509)
Q Consensus 207 ~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 286 (509)
.+|.++..|+++|.++|+|+|++|+++|+ .+.+..|+.||+++.|.||||+++|+.|.+.++ .+++++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~p~i 237 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNAAVI 237 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCCcEE
Confidence 99999999999999999999999999985 567899999999999999999999999999876 469999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHH
Q 010482 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 287 V~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++.+||++++.+++++.++
T Consensus 238 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 317 (452)
T cd07147 238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317 (452)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 367 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 367 i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
+++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 318 i~~a~~~Ga~~l~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~ 394 (452)
T cd07147 318 VNEAVDAGAKLLTGGKRD---GALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDL 394 (452)
T ss_pred HHHHHHCCCEEEecCCcC---CEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999999999753 78999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 447 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++++++++++|+||||++... .+.+||||+|+||+|+++|.+|+++||+.|+|++
T Consensus 395 ~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 395 EKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 99999999999999999986543 4679999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-96 Score=777.56 Aligned_cols=450 Identities=30% Similarity=0.449 Sum_probs=422.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCC-CEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATG-EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g-~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..+||||+|+. ++.+++++||+|+ +++++++.++.+|++.|+++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 38 ~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 115 (500)
T TIGR01238 38 AAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPE 115 (500)
T ss_pred cCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 56899999987 4788999999995 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.+++++...+...+. ..++|+|||++|+|||||+...++++++
T Consensus 116 la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~~~i~~ 183 (500)
T TIGR01238 116 LMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFTGQISA 183 (500)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999999887543211 3689999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|.+.++++.
T Consensus 184 ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~ 263 (500)
T TIGR01238 184 ALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRE 263 (500)
T ss_pred HHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999877788999999999999999999999999999999876
Q ss_pred ---CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 273 ---KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 273 ---~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++
T Consensus 264 ~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~ 343 (500)
T TIGR01238 264 DAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTT 343 (500)
T ss_pred cCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcc---cCCCCceeecEEEecCCCCCcccccccccceEEEEEeC--CHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE 424 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~---~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~~ 424 (509)
++||++++.+++++.++|+++++.|++++.++.. ...+|+|++|||+.+ ++|.+++||+||||++|++|+ ++|
T Consensus 344 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~d 421 (500)
T TIGR01238 344 DVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELD 421 (500)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHH
Confidence 9999999999999999999999999998754321 113579999999974 688899999999999999998 699
Q ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhheee
Q 010482 425 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIK 499 (509)
Q Consensus 425 eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k 499 (509)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|+||+| +++|.+++++|++.|
T Consensus 422 eai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 422 QIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999987653 256899999999999 899999999999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-96 Score=772.14 Aligned_cols=440 Identities=39% Similarity=0.616 Sum_probs=417.7
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHH
Q 010482 59 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 138 (509)
Q Consensus 59 g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~ 138 (509)
|+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH-HHHHH
Q 010482 139 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAE 217 (509)
Q Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~-~~l~~ 217 (509)
+++++.......+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~-~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCccccc-cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 999998776554443332 2345678899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHH
Q 010482 218 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 297 (509)
Q Consensus 218 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~ 297 (509)
+|.++|+|+|++|+++| +.+.++.|+.||+++.|+||||+.+|+.|.+.++++++++++|+|||||+||++|||++.|+
T Consensus 160 ~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa 238 (443)
T cd07152 160 LFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAA 238 (443)
T ss_pred HHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHH
Confidence 99999999999999998 56789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEE
Q 010482 298 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 377 (509)
Q Consensus 298 ~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~ 377 (509)
+.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||++++.+++++.++|++++.+|+++
T Consensus 239 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 318 (443)
T cd07152 239 SNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARL 318 (443)
T ss_pred HHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc
Q 010482 378 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 457 (509)
Q Consensus 378 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~ 457 (509)
++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++++++
T Consensus 319 l~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~ 395 (443)
T cd07152 319 EAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLR 395 (443)
T ss_pred EeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCC
Confidence 999975 36899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECCCCCCC-CCCCccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 010482 458 YGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 458 ~G~v~iN~~~~~~-~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~ 503 (509)
+|+||||++.... +.+||||+|+||+| +++|.+|+++||+.|++++
T Consensus 396 ~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 396 TGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred cCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 9999999876654 67999999999999 8899999999999999864
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-96 Score=773.44 Aligned_cols=447 Identities=41% Similarity=0.642 Sum_probs=423.4
Q ss_pred ecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHH
Q 010482 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 133 (509)
Q Consensus 54 ~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 133 (509)
+||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccc-cCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHH
Q 010482 134 YGAKFIEFYAEEAKRVYGEI-IPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210 (509)
Q Consensus 134 ~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~ 210 (509)
.+++.+++++....+..+.. .+.. .++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999998887665432 1211 23556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 211 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++..|+++|.++|+|+|++|+++|++ +.++.|++| .++.|+||||+++|+.|.+.++++++|+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~d 238 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLAD 238 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCC
Confidence 99999999999999999999999965 788899987 4999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a 370 (509)
||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++++++
T Consensus 239 adl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a 318 (453)
T cd07099 239 ADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA 318 (453)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 371 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 371 ~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
+++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++
T Consensus 319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 398 (453)
T cd07099 319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE 398 (453)
T ss_pred HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHH
Confidence 99999999999764235789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 451 RVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
++++++++|+||||++.. ..+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999999999998754 3578999999999999999999999999999874
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=772.28 Aligned_cols=450 Identities=64% Similarity=1.031 Sum_probs=431.2
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 132 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 132 (509)
++||.||+++++++.++.+|++.+++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHH
Q 010482 133 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~ 212 (509)
..+++.++|++.......+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999999888776665444333456778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCC
Q 010482 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292 (509)
Q Consensus 213 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daD 292 (509)
..+.++|.++|+|+|+++++++++.++++.|+.|+++++|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 240 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 99999999999999999999997778889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 010482 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372 (509)
Q Consensus 293 l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 372 (509)
++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHH
Q 010482 373 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452 (509)
Q Consensus 373 ~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~ 452 (509)
+|+++++||.....+|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 400 (451)
T cd07103 321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV 400 (451)
T ss_pred CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 99999999976533578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 453 ~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
++++++|.|+||++....+.+||||+|+||+|+++|++++++||+.|+++
T Consensus 401 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 401 AEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999998877788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-96 Score=773.06 Aligned_cols=449 Identities=42% Similarity=0.666 Sum_probs=425.2
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-HHHhhH
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL-KEAVGE 131 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~e 131 (509)
++||.||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~ 211 (509)
+..+++.+++++.....+.+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999999988776665543322 34556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 212 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+..+.+++.++ +|+|++|+++|++.++++.|++||+++.|.||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA 238 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence 99999999986 99999999999777889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH-HhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370 (509)
Q Consensus 292 Dl~~a~~~i~~~-~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a 370 (509)
|++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (457)
T cd07108 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLG 318 (457)
T ss_pred CHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-CCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCC
Q 010482 371 VS-KGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445 (509)
Q Consensus 371 ~~-~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d 445 (509)
++ +|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 319 ~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d 398 (457)
T cd07108 319 LSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD 398 (457)
T ss_pred HhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCC
Confidence 98 9999999997642 357999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHH-HHhhheeeEEEE
Q 010482 446 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG-MDEFLEIKYVCL 503 (509)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~-l~~~~~~k~~~~ 503 (509)
.++++++++++++|.|+||++....+.+||||+|.||+|+++|.++ +++||+.|++++
T Consensus 399 ~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~~ 457 (457)
T cd07108 399 LGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVNI 457 (457)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEeC
Confidence 9999999999999999999987777889999999999999999876 799999999853
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=768.83 Aligned_cols=444 Identities=43% Similarity=0.642 Sum_probs=418.5
Q ss_pred EeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhH
Q 010482 52 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131 (509)
Q Consensus 52 ~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 131 (509)
+++||+||+++++++.++.+|++.|+++|+++ |+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999998865 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCC----CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCC
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 207 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~ 207 (509)
+..+++.+++++.......++..+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999988776655433221 12445678999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEE
Q 010482 208 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 287 (509)
Q Consensus 208 ~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 287 (509)
+|+++..+.++|.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|.+.++ .+++++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 99999999999999999999999999977788999999999999999999999999998776 6899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 288 ~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++||++++.+++++.+++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v 316 (451)
T cd07146 237 MDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRV 316 (451)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 317 ~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 393 (451)
T cd07146 317 EEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLD 393 (451)
T ss_pred HHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999999964 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCC-CCCChHHHHHhhheeeEEEE
Q 010482 448 RTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGL-GREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~-G~~~g~~~l~~~~~~k~~~~ 503 (509)
+++++++++++|+||||+... ..+.+||||+|.||+ |+++|.+|+++||+.|++++
T Consensus 394 ~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 394 TIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451 (451)
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEeC
Confidence 999999999999999998654 346899999999995 89999999999999999853
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-95 Score=763.71 Aligned_cols=428 Identities=43% Similarity=0.667 Sum_probs=406.6
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhcc
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 152 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~ 152 (509)
++.|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++.|+..+++.+++++..+++....
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999988776432
Q ss_pred c-cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEe
Q 010482 153 I-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231 (509)
Q Consensus 153 ~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~ 231 (509)
. .+. ++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|.++|.++|+|+|++|+
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 2 222 2445788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCc
Q 010482 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 311 (509)
Q Consensus 232 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~ 311 (509)
++|++ +.+..|+.|++|+.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 159 v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~ 237 (429)
T cd07100 159 LLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQS 237 (429)
T ss_pred EeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCC
Confidence 99955 56789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcee
Q 010482 312 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391 (509)
Q Consensus 312 C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~ 391 (509)
|++++|||||+++||+|+++|+++++++++|+|+|+++++||++++.+++++.+++++++++|+++++||...+..|+|+
T Consensus 238 C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~ 317 (429)
T cd07100 238 CIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFY 317 (429)
T ss_pred CCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997643357999
Q ss_pred ecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCC
Q 010482 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 471 (509)
Q Consensus 392 ~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~ 471 (509)
+|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+||||++....+
T Consensus 318 ~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 397 (429)
T cd07100 318 PPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDP 397 (429)
T ss_pred cCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887778
Q ss_pred CCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 472 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 472 ~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 398 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 429 (429)
T cd07100 398 RLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429 (429)
T ss_pred CCCcCCccccccCCcchHHHHHHhcceeEEeC
Confidence 89999999999999999999999999999853
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-95 Score=766.79 Aligned_cols=450 Identities=34% Similarity=0.552 Sum_probs=419.4
Q ss_pred ecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHH
Q 010482 54 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 132 (509)
Q Consensus 54 ~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev 132 (509)
+||.||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+|||+.+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999996 499
Q ss_pred HHHHHHHHHHHHHHHhhhcc-ccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCH
Q 010482 133 DYGAKFIEFYAEEAKRVYGE-IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209 (509)
Q Consensus 133 ~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p 209 (509)
..+++.+++++......... ..+.. ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999998876653322 11111 1234467889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH----HHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCce
Q 010482 210 LTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 285 (509)
Q Consensus 210 ~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 285 (509)
+++..++++ |.++|+|+|++|+|+|++ ++++.|+.||+|+.|.||||+++|+.|.+.++++++|+++|+|||||+
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~ 239 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPA 239 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeE
Confidence 999876554 578999999999999965 789999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHH
Q 010482 286 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 365 (509)
Q Consensus 286 iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 365 (509)
||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++.+++|+|+++++++||++++.+++++.+
T Consensus 240 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~ 319 (465)
T cd07098 240 IVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEE 319 (465)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 010482 366 FVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 441 (509)
Q Consensus 366 ~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv 441 (509)
++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|
T Consensus 320 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i 399 (465)
T cd07098 320 LVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASV 399 (465)
T ss_pred HHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999986532 24799999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 442 FTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||+|.+.++++++++++|.||||.+.. ..+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus 400 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 400 FGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999998653 346899999999999999999999999999999763
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-94 Score=760.62 Aligned_cols=450 Identities=48% Similarity=0.767 Sum_probs=427.2
Q ss_pred eecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-H
Q 010482 53 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-E 131 (509)
Q Consensus 53 ~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-e 131 (509)
++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999998865 9
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH
Q 010482 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211 (509)
Q Consensus 132 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~ 211 (509)
+..+++.++++++......+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 99999999999988766443332221 24567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 212 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+..+.++|.++|+|+|++++++|++.++++.|++|++++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 239 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence 99999999999999999999999778889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.+++++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (455)
T cd07093 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR 319 (455)
T ss_pred CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 372 SKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus 320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~ 399 (455)
T cd07093 320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399 (455)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999997642 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 400 ~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07093 400 RAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455 (455)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence 99999999999999999988777889999999999999999999999999999863
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-94 Score=761.20 Aligned_cols=447 Identities=46% Similarity=0.731 Sum_probs=422.8
Q ss_pred EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh
Q 010482 51 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130 (509)
Q Consensus 51 ~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 130 (509)
++++||+||+++++++.++.+++++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCC----CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 206 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~ 206 (509)
|+..+++.+++++.......++..+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999888776655433321 1123457889999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceE
Q 010482 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 286 (509)
Q Consensus 207 ~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 286 (509)
.+|+++..|.++|.++|+|+|++|+++|++.++++.|+.||++++|.||||+++|+.|++.++ ++++++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i 238 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence 999999999999999999999999999977777999999999999999999999999999875 789999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHH
Q 010482 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 287 V~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|++|+|++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 318 (453)
T cd07149 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 367 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 367 i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
+++++.+|+++++||... ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 319 i~~a~~~ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~ 395 (453)
T cd07149 319 VEEAVEGGARLLTGGKRD---GAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL 395 (453)
T ss_pred HHHHHHCCCEEEeCCCCC---CeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCH
Confidence 999999999999998653 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 447 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
++++++++++++|+||||++... .+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 396 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 396 QKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999999999987643 468999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-93 Score=747.77 Aligned_cols=444 Identities=23% Similarity=0.319 Sum_probs=404.2
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhh--hcCCHHHH----HHHHHHHHHHHHHh
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAER----SKGLRKWYDLLMAH 109 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~iL~~~a~~l~~~ 109 (509)
+||||+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+.| +.++..+| .++|.++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4799999874 5789999999999999999999999999999999999988 55779999 89999999999999
Q ss_pred --HHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhcccc--CCCCCCceeEEEeecceEEEEEcCCChhHHH
Q 010482 110 --KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII--PATLPDRRLFVLKQPVGVAGAITPWNFPLAM 185 (509)
Q Consensus 110 --~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 185 (509)
.++|++++++|+|||+.+++.|+..+++.+++|+.......+... +...++...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 499999999999999999999999999999999988877655432 2222345678999999999999999999999
Q ss_pred HHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHH
Q 010482 186 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265 (509)
Q Consensus 186 ~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 265 (509)
.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.+ +..++.|+++++|+||||+++|+.|.
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~ 237 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLA 237 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996655 55688899999999999999999999
Q ss_pred HHhhcCCCeEEeecCCCCceEEcCCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHHhccccCC
Q 010482 266 AGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD 343 (509)
Q Consensus 266 ~~~~~~~~~~~lelgG~~~~iV~~da-Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v-~~~f~~~l~~~~~~~~~G~ 343 (509)
..++ +++.+|+||+||+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++++|+
T Consensus 238 ~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~ 314 (489)
T cd07126 238 LELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314 (489)
T ss_pred HHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC
Confidence 8876 5789999999999999999 999999999999999999999999999999995 6999999999999999875
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCC----CC-ceeecEEEec------CCCCCcccccccc
Q 010482 344 GFGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSL----GM-TFYEPTVLSN------VKSEMLVSREEVF 411 (509)
Q Consensus 344 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~~~~eE~f 411 (509)
+++||+++.. .+++.++++++++ +|+++++||..... ++ .|++|||+.. ++++|++++||+|
T Consensus 315 -----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiF 388 (489)
T cd07126 315 -----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVF 388 (489)
T ss_pred -----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCc
Confidence 4789999998 9999999999998 99999999976432 23 3899999852 6789999999999
Q ss_pred cceEEEEEeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceE--EEECCCCCCCCC----CCccCCCCCCC
Q 010482 412 GPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL--VGVNEGLISTEV----APFGGVKQSGL 483 (509)
Q Consensus 412 gPv~~v~~~~~--~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~--v~iN~~~~~~~~----~pfGG~k~SG~ 483 (509)
|||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. +||||+|+||+
T Consensus 389 GPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~ 468 (489)
T cd07126 389 GPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGI 468 (489)
T ss_pred CCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCC
Confidence 99999999999 99999999999999999999999999999999999999 568887765443 99999999999
Q ss_pred CCCChHHH
Q 010482 484 GREGSKYG 491 (509)
Q Consensus 484 G~~~g~~~ 491 (509)
|+++...-
T Consensus 469 g~~~~~~~ 476 (489)
T cd07126 469 GTPEAIRL 476 (489)
T ss_pred CCHhHHHh
Confidence 99876543
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-93 Score=739.16 Aligned_cols=407 Identities=42% Similarity=0.688 Sum_probs=386.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcC
Q 010482 99 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP 178 (509)
Q Consensus 99 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 178 (509)
|++++++|++++++|++++++|+|||..+++.|+..+++.+++++.++....+...+...++...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999999887665443322234567889999999999999
Q ss_pred CChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCH
Q 010482 179 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258 (509)
Q Consensus 179 ~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~ 258 (509)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.++++.|++|+++++|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999778889999999999999999999
Q ss_pred HHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhc
Q 010482 259 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 338 (509)
Q Consensus 259 ~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~ 338 (509)
++|+.|++.++++++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++
T Consensus 161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~ 240 (409)
T PRK10090 161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240 (409)
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEE
Q 010482 339 LKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 417 (509)
Q Consensus 339 ~~~G~p~~~-~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v 417 (509)
+++|||.++ ++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 320 (409)
T PRK10090 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPV 320 (409)
T ss_pred cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEE
Confidence 999999998 9999999999999999999999999999999999765445789999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhhe
Q 010482 418 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 497 (509)
Q Consensus 418 ~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~ 497 (509)
++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+||||++....+..||||+|+||+|+++|.+|+++||+
T Consensus 321 ~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~ 400 (409)
T PRK10090 321 VAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQ 400 (409)
T ss_pred EEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987766678999999999999999999999999
Q ss_pred eeEEEEec
Q 010482 498 IKYVCLGD 505 (509)
Q Consensus 498 ~k~~~~~~ 505 (509)
.|++++++
T Consensus 401 ~k~v~~~~ 408 (409)
T PRK10090 401 TQVVYLQS 408 (409)
T ss_pred eEEEEEec
Confidence 99998754
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-93 Score=748.48 Aligned_cols=432 Identities=29% Similarity=0.440 Sum_probs=403.8
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHH
Q 010482 67 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEE 145 (509)
Q Consensus 67 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 145 (509)
.++.+|++.|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++..
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999996 6999999999999988
Q ss_pred HHhhhccc---cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHc
Q 010482 146 AKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 222 (509)
Q Consensus 146 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~a 222 (509)
.+...+.. .+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 77665431 121123456789999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC---CCCHHHHHHH
Q 010482 223 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD---DADLNVAVNG 299 (509)
Q Consensus 223 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~---daDl~~a~~~ 299 (509)
+|+|++|+|+| +.++++.|+.|+ ++.|+||||+++|+.|.+.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 162 -lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~ 238 (484)
T PLN02203 162 -LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNR 238 (484)
T ss_pred -CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHH
Confidence 99999999998 678999999995 99999999999999999999999999999999999999997 6999999999
Q ss_pred HHHHHhh-ccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEE
Q 010482 300 ALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378 (509)
Q Consensus 300 i~~~~~~-~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~ 378 (509)
+++++|. |+||.|++++|+|||++++|+|+++|+++++++++|||.++ +++||++++.+++++.++|++++++ ++++
T Consensus 239 i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~ 316 (484)
T PLN02203 239 IVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIV 316 (484)
T ss_pred HHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEE
Confidence 9999996 89999999999999999999999999999999999999986 6899999999999999999999887 7899
Q ss_pred eCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccc
Q 010482 379 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 458 (509)
Q Consensus 379 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~ 458 (509)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++
T Consensus 317 ~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~ 395 (484)
T PLN02203 317 HGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSS 395 (484)
T ss_pred eCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 998753 3579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 459 GLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 459 G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|.||||++.. ..+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 396 G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~ 443 (484)
T PLN02203 396 GSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRR 443 (484)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEc
Confidence 9999998754 346799999999999999999999999999999876
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-92 Score=796.68 Aligned_cols=463 Identities=30% Similarity=0.455 Sum_probs=431.6
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCC-EEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~-~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
..+||| ++.+++++||+|++ ++++++.++.+|++.|+++|++||+.|+.+|.++|+++|++++++|++++++|
T Consensus 554 ~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL 627 (1038)
T PRK11904 554 GPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAEL 627 (1038)
T ss_pred cceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 356777 35789999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCC-CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA-TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
+.++++|+|||+.++..|+..++++++||+..++...+..... ...+..+++.++|+|||++|+|||||+...++++++
T Consensus 628 ~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~a 707 (1038)
T PRK11904 628 IALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAA 707 (1038)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999988765432221 123567889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC-
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT- 271 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~- 271 (509)
||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.++++.|+.||+|++|.||||+++|+.|.+.++.+
T Consensus 708 ALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~ 787 (1038)
T PRK11904 708 ALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARD 787 (1038)
T ss_pred HHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999998888999999999999999999999999999988865
Q ss_pred --CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 272 --VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 272 --~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
.+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 788 g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t 867 (1038)
T PRK11904 788 GPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLST 867 (1038)
T ss_pred CCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeC--CHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEE 425 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~~e 425 (509)
++||+|++.+++++.++|+++.+ |+++++||..++ .+|+|+.|||+.. +++.+++||+||||++|++|+ ++||
T Consensus 868 ~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~lde 944 (1038)
T PRK11904 868 DVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDK 944 (1038)
T ss_pred CccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHH
Confidence 99999999999999999999876 899999997653 2489999999963 577889999999999999998 6899
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~ 502 (509)
+|+++|+++|||+++|||+|.+.++++++++++|+||||+..... ..+||||+|.||+| +.||+++|++|++.|+|+
T Consensus 945 aI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~ 1024 (1038)
T PRK11904 945 VIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVT 1024 (1038)
T ss_pred HHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEE
Confidence 999999999999999999999999999999999999999876543 56899999999999 679999999999999998
Q ss_pred Eecc
Q 010482 503 LGDM 506 (509)
Q Consensus 503 ~~~~ 506 (509)
++.-
T Consensus 1025 ~~~~ 1028 (1038)
T PRK11904 1025 VNTT 1028 (1038)
T ss_pred Eccc
Confidence 8643
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-93 Score=744.18 Aligned_cols=426 Identities=35% Similarity=0.523 Sum_probs=398.7
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhc
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 151 (509)
|++.++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999888776655
Q ss_pred cccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEe
Q 010482 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231 (509)
Q Consensus 152 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~ 231 (509)
..... .++...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 43322 23557789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC-CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 232 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
++| +.+.++.|++|++++.|.||||+++|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 160 v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ 238 (431)
T cd07095 160 VQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQ 238 (431)
T ss_pred EeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 998 457899999999999999999999999999987754 699999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCc
Q 010482 311 TCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389 (509)
Q Consensus 311 ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~ 389 (509)
.|++++|||||++ ++|+|+++|+++++++++|+|+++++.+||++++.+++++.+++++++.+|+++++||...+.+|+
T Consensus 239 ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~ 318 (431)
T cd07095 239 RCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTA 318 (431)
T ss_pred CCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCe
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999975444679
Q ss_pred eeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-
Q 010482 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI- 468 (509)
Q Consensus 390 ~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~- 468 (509)
|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+||||.+..
T Consensus 319 ~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~ 397 (431)
T cd07095 319 FLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTG 397 (431)
T ss_pred EEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 9999999 69999999999999999999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 010482 469 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501 (509)
Q Consensus 469 ~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~ 501 (509)
..+.+||||+|.||+|+++|.+|+++|+ .|++
T Consensus 398 ~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~ 429 (431)
T cd07095 398 ASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA 429 (431)
T ss_pred CCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence 3467999999999999999999999554 4544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-92 Score=741.96 Aligned_cols=429 Identities=43% Similarity=0.704 Sum_probs=407.7
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhc
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 151 (509)
|++++++.|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++....+..+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999988766655
Q ss_pred cccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHH-HHHHHHHHHHcCCCCccEE
Q 010482 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 152 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~-~~~l~~~l~~aGlP~gvv~ 230 (509)
...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..|.++|.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 444433245667899999999999999999999999999999999999999999999998 5789999999999999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
+++|++.++++.|+.|++++.|.||||+++|+.|++.++++++++++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 240 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ 240 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 99998778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCce
Q 010482 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390 (509)
Q Consensus 311 ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~ 390 (509)
.|++++|||||++++|+|+++|+++++.+++|+|.++++.+||++++.+++++.+++++++.+|+++++||.. +|+|
T Consensus 241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~ 317 (431)
T cd07104 241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLF 317 (431)
T ss_pred CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999865 3689
Q ss_pred eecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC
Q 010482 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 470 (509)
Q Consensus 391 ~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~ 470 (509)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++....
T Consensus 318 ~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 397 (431)
T cd07104 318 YQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVND 397 (431)
T ss_pred ECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred -CCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 471 -EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 471 -~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 398 ~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 398 EPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred CCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 789999999999999999999999999999853
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-92 Score=740.32 Aligned_cols=427 Identities=31% Similarity=0.475 Sum_probs=399.6
Q ss_pred CCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHH
Q 010482 68 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 146 (509)
Q Consensus 68 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 146 (509)
.+.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++...
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999998 49999999999999887
Q ss_pred HhhhccccCCC----CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHc
Q 010482 147 KRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 222 (509)
Q Consensus 147 ~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~a 222 (509)
........... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 76543221111 1244678899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHH
Q 010482 223 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALA 302 (509)
Q Consensus 223 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~ 302 (509)
|+|+|++|+++|++.+. ..|+.|| ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++
T Consensus 161 ~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~ 238 (436)
T cd07135 161 YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238 (436)
T ss_pred hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHH
Confidence 69999999999866555 4699999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCc
Q 010482 303 AKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 382 (509)
Q Consensus 303 ~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~ 382 (509)
++|.++||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++ |+++++||.
T Consensus 239 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~ 314 (436)
T cd07135 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE 314 (436)
T ss_pred HHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence 999999999999999999999999999999999999999999 9999999999999999999999986 889999997
Q ss_pred ccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 010482 383 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 462 (509)
Q Consensus 383 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~ 462 (509)
.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||
T Consensus 315 ~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~ 393 (436)
T cd07135 315 MD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVV 393 (436)
T ss_pred cC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEE
Confidence 65 35799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 463 VNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 463 iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
||+... ..+.+||||+|+||+|+++|.+|+++||+.|+|.
T Consensus 394 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 394 INDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred ECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 998654 3578999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-92 Score=739.81 Aligned_cols=427 Identities=41% Similarity=0.632 Sum_probs=402.2
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhc
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 151 (509)
|++.++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++.......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999988776544
Q ss_pred cccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEe
Q 010482 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 231 (509)
Q Consensus 152 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~ 231 (509)
...+....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 43333223456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCC---chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhcc
Q 010482 232 VMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 308 (509)
Q Consensus 232 v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~ 308 (509)
++|+ +.++++.|++||+|+.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 9975 3457899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CC
Q 010482 309 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LG 387 (509)
Q Consensus 309 GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~ 387 (509)
||.|++++|||||+++||+|+++|+++++++++| ++++||++++.+++++.+++++++++|+++++||.... .+
T Consensus 241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~ 315 (432)
T cd07105 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPS 315 (432)
T ss_pred CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 9999999999999999999999999999999998 67899999999999999999999999999999997653 35
Q ss_pred CceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCC
Q 010482 388 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 467 (509)
Q Consensus 388 g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~ 467 (509)
++|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+||||++.
T Consensus 316 ~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~ 395 (432)
T cd07105 316 GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMT 395 (432)
T ss_pred CeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 468 IS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 468 ~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
.. .+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 396 ~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 396 VHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 54 4789999999999999999999999999999864
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-91 Score=733.02 Aligned_cols=422 Identities=30% Similarity=0.458 Sum_probs=393.3
Q ss_pred HHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccc
Q 010482 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 153 (509)
Q Consensus 75 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 153 (509)
.++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++.......+..
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999999997 499999999999998876644331
Q ss_pred ---cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEE
Q 010482 154 ---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 154 ---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 230 (509)
.+........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 111112235678999999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHh-hccC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF-RNSG 309 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~-~~~G 309 (509)
+++| +.+.++.|+.| +++.|+||||+++|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| .|+|
T Consensus 162 ~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~G 239 (432)
T cd07137 162 VIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNG 239 (432)
T ss_pred EEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCC
Confidence 9999 56788899987 5999999999999999999999999999999999999999999999999999999999 5999
Q ss_pred CccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCc
Q 010482 310 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389 (509)
Q Consensus 310 Q~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~ 389 (509)
|.|++++|+|||++++|+|+++|+++++++++||| ++++++||++++.+++++.+++++++. |+++++||... .+|+
T Consensus 240 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~ 316 (432)
T cd07137 240 QACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNL 316 (432)
T ss_pred CcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCC
Confidence 99999999999999999999999999999999999 568999999999999999999999998 89999999753 3579
Q ss_pred eeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-
Q 010482 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI- 468 (509)
Q Consensus 390 ~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~- 468 (509)
|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.||||.+..
T Consensus 317 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~ 396 (432)
T cd07137 317 YIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQ 396 (432)
T ss_pred EEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred -CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 469 -STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 469 -~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 397 ~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 397 YAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred ccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 3478999999999999999999999999999885
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-92 Score=734.53 Aligned_cols=420 Identities=30% Similarity=0.482 Sum_probs=392.2
Q ss_pred HHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhcc-
Q 010482 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGE- 152 (509)
Q Consensus 75 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~- 152 (509)
..+++|++||+.|+++|..+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.+++++..++...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4688999999999999999999999999999999999999999999999999997 49999999999999887776543
Q ss_pred ccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEE
Q 010482 153 IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 153 ~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 230 (509)
..+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 22211 12345788999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
+++| +.+.+..|+.|+ |+.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 161 ~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ 238 (449)
T cd07136 161 VVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQ 238 (449)
T ss_pred EEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCC
Confidence 9998 556788899776 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCce
Q 010482 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390 (509)
Q Consensus 311 ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~ 390 (509)
.|++++|+|||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ +++++||... .+|+|
T Consensus 239 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~-~~g~~ 311 (449)
T cd07136 239 TCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTD-RETLY 311 (449)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCcC-CCCCE
Confidence 999999999999999999999999999999999998 8899999999999999999986 3899999764 35799
Q ss_pred eecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--
Q 010482 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-- 468 (509)
Q Consensus 391 ~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-- 468 (509)
++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+||||....
T Consensus 312 ~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~ 391 (449)
T cd07136 312 IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHL 391 (449)
T ss_pred EeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 469 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 469 ~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
..+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 392 ANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred cCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 347899999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-90 Score=732.41 Aligned_cols=431 Identities=29% Similarity=0.451 Sum_probs=399.7
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHH
Q 010482 67 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEE 145 (509)
Q Consensus 67 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 145 (509)
..+.+|++.++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999999999999999999999999999999999999999999999999964 999999999998887
Q ss_pred HHhhhccc-c--CCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHc
Q 010482 146 AKRVYGEI-I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 222 (509)
Q Consensus 146 ~~~~~~~~-~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~a 222 (509)
.++..... . +........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 66543321 1 11112345789999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHH
Q 010482 223 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALA 302 (509)
Q Consensus 223 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~ 302 (509)
+|+|++++++| +.+.+..|+.|+ ++.|+||||+++|+.|+++++++++|+++|+|||||+||++|||++.|++.+++
T Consensus 163 -lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~ 239 (493)
T PTZ00381 163 -LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAW 239 (493)
T ss_pred -CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHH
Confidence 99999999998 677888999988 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCc
Q 010482 303 AKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 382 (509)
Q Consensus 303 ~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~ 382 (509)
++|.|+||.|++++++|||++++|+|+++|++.++++. |++.++++++||+++.++++++.++++ ++|+++++||.
T Consensus 240 g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~ 315 (493)
T PTZ00381 240 GKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE 315 (493)
T ss_pred HHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCC
Confidence 99999999999999999999999999999999999985 777788999999999999999999996 36999999997
Q ss_pred ccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 010482 383 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 462 (509)
Q Consensus 383 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~ 462 (509)
.+ .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+
T Consensus 316 ~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~ 394 (493)
T PTZ00381 316 VD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVV 394 (493)
T ss_pred cC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 64 35689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 463 VNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 463 iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+... ..+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 395 IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 395 INDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred ECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 998754 4578999999999999999999999999999998764
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-90 Score=722.34 Aligned_cols=422 Identities=33% Similarity=0.456 Sum_probs=391.1
Q ss_pred HHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-HHHHh-hHHHHHHHHHHHHHHHHHhhhccc
Q 010482 76 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 153 (509)
Q Consensus 76 av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 153 (509)
.+++|++||+.|+++|+.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.+++++.......+..
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56774 599999999999998876654432
Q ss_pred c-CC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEE
Q 010482 154 I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 154 ~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 230 (509)
. .. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 11 112345689999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
+++| +.++++.|+.|+ ++.|+||||+++|+.|++.++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 162 ~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ 239 (434)
T cd07133 162 VVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQ 239 (434)
T ss_pred EEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCC
Confidence 9998 457888898776 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCC
Q 010482 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGM 388 (509)
Q Consensus 311 ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g 388 (509)
.|++++|+|||++++|+|+++|+++++++++|+ ++++++||++++.+++++.++|++++++|+++++||.... .+|
T Consensus 240 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g 317 (434)
T cd07133 240 TCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAAT 317 (434)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCC
Confidence 999999999999999999999999999999986 4678999999999999999999999999999999987542 357
Q ss_pred ceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 010482 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 468 (509)
Q Consensus 389 ~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~ 468 (509)
+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||.+..
T Consensus 318 ~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 397 (434)
T cd07133 318 RKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL 397 (434)
T ss_pred cEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred --CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 469 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 469 --~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
.++.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 398 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 398 HVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 3478999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-90 Score=782.47 Aligned_cols=448 Identities=30% Similarity=0.458 Sum_probs=419.1
Q ss_pred eeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
.+|+|+.. .+..++++||+| ++++++++.++.+|++.|+++|++||+.|+++|..+|+++|++++++|++++++|+
T Consensus 649 p~~~~~~~---~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~ 725 (1318)
T PRK11809 649 PMLEDPVA---AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLM 725 (1318)
T ss_pred CcccCcCC---CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 45677422 467899999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
.++++|+|||+.++..|+..++++++||+.+.+.... ...++|+|||++|+|||||+.+.++++++||
T Consensus 726 ~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaAL 793 (1318)
T PRK11809 726 GLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAAL 793 (1318)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988754210 2468999999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC--
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV-- 272 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~-- 272 (509)
++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|.+.+++++
T Consensus 794 aAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~ 873 (1318)
T PRK11809 794 AAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDP 873 (1318)
T ss_pred HcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhccc
Confidence 999999999999999999999999999999999999999988889999999999999999999999999999988775
Q ss_pred ----CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 273 ----KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 273 ----~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+|+++|+||||++||++|||++.|++.+++|+|.++||+|++.+++|||++++|+|+++|+++++.+++|||.+.+
T Consensus 874 ~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~ 953 (1318)
T PRK11809 874 QGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLS 953 (1318)
T ss_pred ccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeC--CH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TE 423 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~ 423 (509)
+++||+|++.+++++.++|++++++|++++.|+.... ..|+|++|||+.. +++.++++|+||||++|++|+ |+
T Consensus 954 tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~l 1031 (1318)
T PRK11809 954 TDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQL 1031 (1318)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCH
Confidence 9999999999999999999999999999999875432 3589999999974 667889999999999999997 79
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCCccCCCCCCCC-CCChHHHHHhhheeeE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLEIKY 500 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~ 500 (509)
||+|+++|+++|||+++|||+|.+.++++++++++|+||||+..... ..+||||+|.||+| +.||++++..|++.+.
T Consensus 1032 deaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1032 DELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred HHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999876543 46899999999999 4699999999999873
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-90 Score=721.74 Aligned_cols=424 Identities=31% Similarity=0.473 Sum_probs=397.0
Q ss_pred HHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccc
Q 010482 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 153 (509)
Q Consensus 75 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 153 (509)
+++++|++||+.|+++|..+|.++|.++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++.......+..
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999997 699999999999988765543321
Q ss_pred -c--CCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEE
Q 010482 154 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 154 -~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 230 (509)
. +....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 1 11123456789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
+++| +.+.+..|++|+ ++.|.||||+.+|+.|++.++++.+|+++|+|||||+||++|||++.|++.+++++|.++||
T Consensus 161 ~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ 238 (433)
T cd07134 161 VFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQ 238 (433)
T ss_pred EEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCC
Confidence 9999 567889999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHHhccccCCC-CCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCc
Q 010482 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389 (509)
Q Consensus 311 ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~ 389 (509)
.|++++|+|||++++|+|+++|++++++++.|+| .++++++||++++.+++++.++|++++++|+++++||... .+|+
T Consensus 239 ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~ 317 (433)
T cd07134 239 TCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQR 317 (433)
T ss_pred cccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCC
Confidence 9999999999999999999999999999988887 8899999999999999999999999999999999999764 3579
Q ss_pred eeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-
Q 010482 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI- 468 (509)
Q Consensus 390 ~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~- 468 (509)
|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+.++++++++++|.||||++..
T Consensus 318 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 397 (433)
T cd07134 318 YIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLH 397 (433)
T ss_pred EEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred -CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 469 -STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 469 -~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
..+.+||||+|+||+|+++|.+++++||+.|+|.
T Consensus 398 ~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 398 FLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 3478999999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=779.26 Aligned_cols=452 Identities=31% Similarity=0.454 Sum_probs=422.8
Q ss_pred eeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
.+|+|+... +..++++||+| ++++++++.++.+++++|++.|++||+.|+.+|.++|+++|++++++|++++++|+
T Consensus 557 ~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~ 633 (1208)
T PRK11905 557 PLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELF 633 (1208)
T ss_pred ceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 466665442 56799999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHh
Q 010482 115 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 194 (509)
Q Consensus 115 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 194 (509)
.++++|+||+..++..|+..++++++||+...+...+ ...++|+|||++|+|||||+.+.++++++||
T Consensus 634 ~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aAL 701 (1208)
T PRK11905 634 ALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAAL 701 (1208)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988765421 1356899999999999999999999999999
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC---
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT--- 271 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~--- 271 (509)
++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|.+.++++
T Consensus 702 aaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~ 781 (1208)
T PRK11905 702 VAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGP 781 (1208)
T ss_pred HcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999998876
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
.+|+++|+|||||+||++|||++.|++.+++|+|.++||+|++++++|||++++|+|+++|+++++++++|||.+.++++
T Consensus 782 ~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~ 861 (1208)
T PRK11905 782 PVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDV 861 (1208)
T ss_pred CCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeC--CHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIH 428 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~~eai~ 428 (509)
||+|++.+++++.++|++++.+|+.++.|+.... .+|+|+.|||+.. +++.++++|+||||++|++|+ |+||+|+
T Consensus 862 GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~ 939 (1208)
T PRK11905 862 GPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVID 939 (1208)
T ss_pred cCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHH
Confidence 9999999999999999999999999888764322 3589999999973 578899999999999999997 6999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCCccCCCCCCCCC-CChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G~-~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.+.++++.+++++|+||||+..... ..+||||+|.||+|. .+|+++|++|++.|+++++
T Consensus 940 ~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 940 DINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 999999999999999999999999999999999999876643 468999999999995 8999999999999998764
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=713.54 Aligned_cols=421 Identities=31% Similarity=0.468 Sum_probs=389.2
Q ss_pred HHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccc
Q 010482 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 153 (509)
Q Consensus 75 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 153 (509)
+|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++++++......+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 599999999999998877654432
Q ss_pred cCCC---CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEE
Q 010482 154 IPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 154 ~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 230 (509)
.+.. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 2111 11245788999999999999999999999999999999999999999999999999999999986 9999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
+++|++. .+..|+. ++|+.|.||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.++||
T Consensus 161 vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ 238 (443)
T cd07132 161 VVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQ 238 (443)
T ss_pred EEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999544 4566775 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCce
Q 010482 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390 (509)
Q Consensus 311 ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~ 390 (509)
.|++++|+|||++++|+|+++|++++++++.|+| ++++++||++++.+++++.+++++ +++++||..+ .+++|
T Consensus 239 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~ 311 (443)
T cd07132 239 TCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERY 311 (443)
T ss_pred ceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCE
Confidence 9999999999999999999999999999999988 788999999999999999999873 5899999764 35789
Q ss_pred eecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-
Q 010482 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS- 469 (509)
Q Consensus 391 ~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~- 469 (509)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++...
T Consensus 312 ~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~ 391 (443)
T cd07132 312 IAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHY 391 (443)
T ss_pred EeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred -CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 470 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 470 -~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
.+.+||||+|+||+|+++|.+|+++|++.|++++++
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 392 TLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 367999999999999999999999999999998774
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=702.18 Aligned_cols=418 Identities=34% Similarity=0.532 Sum_probs=386.6
Q ss_pred HHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccc
Q 010482 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 153 (509)
Q Consensus 75 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 153 (509)
.++++|++||+.|+++|..+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.......+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3889999999999999999999999999999999999999999999999988776 499999999999988776554322
Q ss_pred -c--CCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEE
Q 010482 154 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 230 (509)
Q Consensus 154 -~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 230 (509)
. +....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.+ |+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 1 1111234578899999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred eecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCC
Q 010482 231 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310 (509)
Q Consensus 231 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ 310 (509)
+++|+ .+.+..|+.|| ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.++||
T Consensus 161 vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 238 (426)
T cd07087 161 VVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQ 238 (426)
T ss_pred EEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCC
Confidence 99984 46788999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCce
Q 010482 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390 (509)
Q Consensus 311 ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~ 390 (509)
.|++++|||||++++|+|+++|++++++++.|+| ++.+++||++++.+++++.++++++ ++++||... .+|+|
T Consensus 239 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~ 311 (426)
T cd07087 239 TCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERY 311 (426)
T ss_pred ccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCE
Confidence 9999999999999999999999999999986666 4688999999999999999999864 899998764 35789
Q ss_pred eecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--
Q 010482 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-- 468 (509)
Q Consensus 391 ~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-- 468 (509)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++..
T Consensus 312 ~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 391 (426)
T cd07087 312 IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHA 391 (426)
T ss_pred EeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 469 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 469 ~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 392 AIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 3478999999999999999999999999999873
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-84 Score=682.49 Aligned_cols=415 Identities=26% Similarity=0.335 Sum_probs=377.1
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhh--
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY-- 150 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-- 150 (509)
+++|+++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++...+...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred ccccCCC------CCCceeEEEeecceEEEEEcCCChhHHH--HHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHH---
Q 010482 151 GEIIPAT------LPDRRLFVLKQPVGVAGAITPWNFPLAM--ITRKVGPALACGCTVVVKPSEFTPLTALAAAELA--- 219 (509)
Q Consensus 151 ~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l--- 219 (509)
+...... .++...++.++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++.++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 2211111 1123457889999999999999999987 4589999999999999999999999999988776
Q ss_pred -HHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc--CCCeEEeecCCCCceEEcCCC---CH
Q 010482 220 -LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDA---DL 293 (509)
Q Consensus 220 -~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~--~~~~~~lelgG~~~~iV~~da---Dl 293 (509)
.++|+|+|++|+|+|++.+.++.|++||+|++|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|+ |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 589999999999999777789999999999999999999999999999998 699999999999999999999 89
Q ss_pred HHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 010482 294 NVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372 (509)
Q Consensus 294 ~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 372 (509)
+.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++ ||++++.+.+++.+.|+++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999875 467777777888888999998
Q ss_pred C-CCEEEeCCcccCCCCceeecEEEecCC---CCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCC--H
Q 010482 373 K-GAKVLLGGRRHSLGMTFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN--L 446 (509)
Q Consensus 373 ~-Ga~~~~gg~~~~~~g~~~~Ptvl~~~~---~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d--~ 446 (509)
+ |+++++||... .+|+|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||++||||+| .
T Consensus 311 ~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 389 (454)
T cd07129 311 APGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL 389 (454)
T ss_pred cCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence 8 99999999764 357999999998665 689999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHhhc--cceEEEECCCCCCC---CCCCccC-CCCCCCCCC--ChHHHHHhhhee
Q 010482 447 QRTWRVSEAL--EYGLVGVNEGLIST---EVAPFGG-VKQSGLGRE--GSKYGMDEFLEI 498 (509)
Q Consensus 447 ~~~~~~~~~l--~~G~v~iN~~~~~~---~~~pfGG-~k~SG~G~~--~g~~~l~~~~~~ 498 (509)
+++++++++| ++|+||||++.... +.+|||| +|.||+|++ +|.+++++||++
T Consensus 390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 9999999999 69999999875532 4899999 999999999 789999999986
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=681.41 Aligned_cols=434 Identities=23% Similarity=0.284 Sum_probs=379.4
Q ss_pred CeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 010482 49 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 128 (509)
Q Consensus 49 ~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 128 (509)
..=.-+||+|++++++++.++. ++++++|++||+.|+++++.+|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 65 ~~~~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a 141 (551)
T TIGR02288 65 WVGGERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMA 141 (551)
T ss_pred ccccccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence 3445679999999999999986 8999999999999999999999999999999999999999999999999999998
Q ss_pred hh-----HHHHHHHHHHHHHHHHHhhhcccc---CCCCCC---ceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCC
Q 010482 129 VG-----EVDYGAKFIEFYAEEAKRVYGEII---PATLPD---RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 197 (509)
Q Consensus 129 ~~-----ev~~~~~~l~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaG 197 (509)
+. ++++.++.++|++....++.+... +..... ...+..++|+||+++|+|||||+++.++++++||++|
T Consensus 142 ~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaG 221 (551)
T TIGR02288 142 FQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATG 221 (551)
T ss_pred HhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcC
Confidence 64 788899999999988877766533 211111 1223478999999999999999999999999999999
Q ss_pred CEEEecCCCCCHHHHH----HHHHHHHHcCCCCccEEeecCC-chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 198 CTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 198 N~vVlkps~~~p~~~~----~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
|+||+|||+.+|+++. .+.++|.++|+|+|++|+++|. +.++++.|+.||+|++|.||||+++|+.|.+.++ .
T Consensus 222 N~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~ 299 (551)
T TIGR02288 222 NPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--Q 299 (551)
T ss_pred CeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--c
Confidence 9999999999999655 5679999999999999999985 6789999999999999999999999999999876 4
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHHhccccCC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNLKVGD 343 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~---------v~~~f~~~l~~~~~~~~~G~ 343 (509)
+++++|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|+|||++ +||+|+++|+++++++ +||
T Consensus 300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd 378 (551)
T TIGR02288 300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD 378 (551)
T ss_pred CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence 799999999999999999999999999999999999999999999999999 7999999999999999 999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEE
Q 010482 344 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 419 (509)
Q Consensus 344 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~ 419 (509)
|.++.+++||++++.+++++ ++++++| ++++||.... .+++|++|||+...+++|++++||+||||++|++
T Consensus 379 p~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~ 453 (551)
T TIGR02288 379 PARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVA 453 (551)
T ss_pred cccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEE
Confidence 99999999999999999995 5667788 5666665421 2336889999964445999999999999999999
Q ss_pred eCCHHHHHHHHhcC--CCC-cEEEEEcCCHHHHHHHHhhc----------cceEEEECCCCCCCCCCCccCCCCCCCCCC
Q 010482 420 FKTEEEAIHMANDT--NAG-LAAYIFTNNLQRTWRVSEAL----------EYGLVGVNEGLISTEVAPFGGVKQSGLGRE 486 (509)
Q Consensus 420 ~~~~~eai~l~n~~--~~g-l~asv~t~d~~~~~~~~~~l----------~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~ 486 (509)
|+|.||||+++|++ +|| |+++|||+|.++++++.+++ ++|.|+||. ..||++.+.||....
T Consensus 454 ~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~------~~~~~~~~~sg~n~~ 527 (551)
T TIGR02288 454 VDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ------SAAFSDFHGTGGNPA 527 (551)
T ss_pred ECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc------CCCCCCCCCCCCCCc
Confidence 99999999999998 566 99999999999999999999 667777774 456788888887644
Q ss_pred -ChHHHHHhhheee
Q 010482 487 -GSKYGMDEFLEIK 499 (509)
Q Consensus 487 -~g~~~l~~~~~~k 499 (509)
+..+.--.|...|
T Consensus 528 a~~~~~~~~~~~~r 541 (551)
T TIGR02288 528 ANASLSDGAFVANR 541 (551)
T ss_pred cCCcccchhhhhcc
Confidence 4445555555544
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=669.98 Aligned_cols=429 Identities=52% Similarity=0.835 Sum_probs=407.2
Q ss_pred HHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccc
Q 010482 74 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 153 (509)
Q Consensus 74 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~ 153 (509)
+++++.|++|++.|+.+|.++|.++|+++++.|.+++++|+++++.|+||+..+++.|+..+++.+++++...+...+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999988887765543
Q ss_pred cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeec
Q 010482 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 233 (509)
Q Consensus 154 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~ 233 (509)
......+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 32223356778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccc
Q 010482 234 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 313 (509)
Q Consensus 234 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~ 313 (509)
|++.+++..|+.|++++.|.||||.++++.|.+.++++++|+++|+||+|++||++|+|++.+++.+++++|.++||.|+
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~ 240 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence 97666889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCceee
Q 010482 314 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYE 392 (509)
Q Consensus 314 a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~ 392 (509)
+++++|||++++++|+++|+++++++++|+|+|+++++||++++.+++++.++++++.++|+++++||..... +|+|++
T Consensus 241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~ 320 (432)
T cd07078 241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVP 320 (432)
T ss_pred CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976532 479999
Q ss_pred cEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CC
Q 010482 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TE 471 (509)
Q Consensus 393 Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~ 471 (509)
|||+.+++++++++++|+||||++|++|+|.||||+++|++++||+++|||+|.+.++++++++++|+|+||++... .+
T Consensus 321 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 400 (432)
T cd07078 321 PTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEP 400 (432)
T ss_pred cEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998776 78
Q ss_pred CCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 472 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 472 ~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 401 ~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 401 SAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999885
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-83 Score=672.68 Aligned_cols=415 Identities=19% Similarity=0.200 Sum_probs=376.1
Q ss_pred HHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhh--c
Q 010482 74 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--G 151 (509)
Q Consensus 74 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--~ 151 (509)
++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||. ++..|+..+++.+++++..+.... +
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6799999999999999999999999999999999999999999999999999 777899999999999998876531 1
Q ss_pred cccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCC-CCcc
Q 010482 152 EIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGV 228 (509)
Q Consensus 152 ~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGl-P~gv 228 (509)
..... ...+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++|.++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 11111 11134568899999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred EEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC-CHHHHHHHHHHHHhhc
Q 010482 229 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRN 307 (509)
Q Consensus 229 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da-Dl~~a~~~i~~~~~~~ 307 (509)
+++++|++. .+..|+.||+++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |++.+++.+++++|.|
T Consensus 161 ~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~ 237 (442)
T cd07084 161 VTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237 (442)
T ss_pred eEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcc
Confidence 999999765 89999999999999999999999999998874 8999999999999999999 6999999999999999
Q ss_pred cCCccccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC-CCEEEeCCcccC
Q 010482 308 SGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHS 385 (509)
Q Consensus 308 ~GQ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~ 385 (509)
+||.|++++|+|||++ ++|+|+++|.++++++++| ++.+||++++ ++.++|++++++ |+++++||....
T Consensus 238 ~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~ 308 (442)
T cd07084 238 SGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELK 308 (442)
T ss_pred cCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccc
Confidence 9999999999999999 9999999999999999998 6789999765 456667777777 599999997521
Q ss_pred ------CCCceeecEEEecCCCCC---cccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHh
Q 010482 386 ------LGMTFYEPTVLSNVKSEM---LVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454 (509)
Q Consensus 386 ------~~g~~~~Ptvl~~~~~~~---~~~~eE~fgPv~~v~~~~~--~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~ 454 (509)
..|+|++|||+.+++++| ++++||+||||++|++|+| .+|+|+++|+++|||+++|||+|.+.++++++
T Consensus 309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 388 (442)
T cd07084 309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG 388 (442)
T ss_pred cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence 247899999999999997 9999999999999999999 99999999999999999999999999999999
Q ss_pred hc-cceEEEECCC--CCCCCCCCccC-CCCCCCCCCC-hHHHHHhhheeeEE
Q 010482 455 AL-EYGLVGVNEG--LISTEVAPFGG-VKQSGLGREG-SKYGMDEFLEIKYV 501 (509)
Q Consensus 455 ~l-~~G~v~iN~~--~~~~~~~pfGG-~k~SG~G~~~-g~~~l~~~~~~k~~ 501 (509)
++ ++|+||||.. ....+..|||| .|.||+|++. |.+++++||+...+
T Consensus 389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 99 9999999976 33445678876 8899999995 99999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=667.97 Aligned_cols=447 Identities=22% Similarity=0.264 Sum_probs=392.1
Q ss_pred CCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 010482 45 AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 124 (509)
Q Consensus 45 ~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 124 (509)
+.++...+++||+|++++++++.+ |++.+|++|++||+.|+++|+.+|.++|++++++|++++++|++++++|+||+
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~ 137 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQA 137 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCC
Confidence 345789999999999999999887 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh-----HHHHHHHHHHHHHHHHHhhhccccCC---CC--C-CceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 125 LKEAVG-----EVDYGAKFIEFYAEEAKRVYGEIIPA---TL--P-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 125 ~~~a~~-----ev~~~~~~l~~~~~~~~~~~~~~~~~---~~--~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
+.++.. |++++++.++|+++....+.+..... .. + .......++|+||+++|+|||||+++.+.++++|
T Consensus 138 ~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~A 217 (549)
T cd07127 138 FMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFAS 217 (549)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHH
Confidence 988863 89999999999998887765542211 00 0 1112347899999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHH----HHHHHHHHcCCCCccEEeecCC-chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 194 LACGCTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~----~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
|++||+||+|||+.+|+++. .+.++|.++|+|+|+||+++++ +.++++.|+.||+|++|.||||+++|+.|.+.+
T Consensus 218 LaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a 297 (549)
T cd07127 218 LATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANA 297 (549)
T ss_pred HhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999998864 4668999999999999999985 367899999999999999999999999999988
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHHhcc
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNL 339 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~---------v~~~f~~~l~~~~~~~ 339 (509)
+ .+++++|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|+|||++ +||+|+++|+++++++
T Consensus 298 ~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l 375 (549)
T cd07127 298 R--QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL 375 (549)
T ss_pred c--cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh
Confidence 7 4799999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred ccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceE
Q 010482 340 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVA 415 (509)
Q Consensus 340 ~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~ 415 (509)
+|||.+..+++||++++++++++.+ +++.|+ +++||.... .+++|++|||+...+++|++++||+||||+
T Consensus 376 -~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl 449 (549)
T cd07127 376 -LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIA 449 (549)
T ss_pred -cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceE
Confidence 9999999999999999999999864 555665 777776432 234567999999888999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCC--C-CcEEEEEcCCHHHHHHHHhh-ccce-EEEECCCCCC--CCCCCccCCCCCCCCCC-C
Q 010482 416 PLLCFKTEEEAIHMANDTN--A-GLAAYIFTNNLQRTWRVSEA-LEYG-LVGVNEGLIS--TEVAPFGGVKQSGLGRE-G 487 (509)
Q Consensus 416 ~v~~~~~~~eai~l~n~~~--~-gl~asv~t~d~~~~~~~~~~-l~~G-~v~iN~~~~~--~~~~pfGG~k~SG~G~~-~ 487 (509)
+|++|+|.||+|+++|++. + ||+++|||+|.+.++++.++ .++| +++||..... ...+||||++.||.... +
T Consensus 450 ~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~ 529 (549)
T cd07127 450 FVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAAN 529 (549)
T ss_pred EEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccc
Confidence 9999999999999999984 4 69999999999999999999 4455 9999953322 23356999999999865 6
Q ss_pred hHHHHHhhheeeEEE
Q 010482 488 SKYGMDEFLEIKYVC 502 (509)
Q Consensus 488 g~~~l~~~~~~k~~~ 502 (509)
..+..-.|...+--.
T Consensus 530 ~~~~~~~fv~~r~~~ 544 (549)
T cd07127 530 AALTDGAFVANRFRV 544 (549)
T ss_pred cccchhhhhhcceEE
Confidence 666677777665433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-83 Score=614.43 Aligned_cols=457 Identities=31% Similarity=0.508 Sum_probs=424.0
Q ss_pred CCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 010482 47 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 126 (509)
Q Consensus 47 ~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 126 (509)
+.++++++.|+||+.+++++.-++.|+++.+..|++||++|.+.+...|.++|+.+.+.+-+++|.+++..+++|||+.-
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hHHHHHHHHHHHHHHHHHhhhc-cccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEe
Q 010482 127 EAV-GEVDYGAKFIEFYAEEAKRVYG-EIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 202 (509)
Q Consensus 127 ~a~-~ev~~~~~~l~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVl 202 (509)
+|. +||..+.+.+.|.....++-.. +..|.. .--...+++++|+||++.|.|||||+.+++.++..||.+||++|+
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 884 6999999999887766544222 211211 112346789999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHH----HHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEee
Q 010482 203 KPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 278 (509)
Q Consensus 203 kps~~~p~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~le 278 (509)
|-|+.+.++... +..+|...|-|+++++++++- ++.+++|.+|+.++.+.|.||..+++.|++.+++.++|+++|
T Consensus 222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lE 300 (583)
T KOG2454|consen 222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLE 300 (583)
T ss_pred EeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEe
Confidence 999999988754 445577779999999999994 689999999999999999999999999999999999999999
Q ss_pred cCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHH
Q 010482 279 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA 358 (509)
Q Consensus 279 lgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~ 358 (509)
||||+++||++|+|+++.+.-++++.|..+||.|...+|++||+++||.|+..|-++++.++.|.|+-...+||.|++..
T Consensus 301 LGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~n 380 (583)
T KOG2454|consen 301 LGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQN 380 (583)
T ss_pred ecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCC
Q 010482 359 ALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 434 (509)
Q Consensus 359 ~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~ 434 (509)
+++.++.++.+|+.+||++++||.+.. ..|.|++||++.+++++|+|++||.|||+++++++++.|++|+++|+++
T Consensus 381 rfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~ 460 (583)
T KOG2454|consen 381 RFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSR 460 (583)
T ss_pred chHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCc
Confidence 999999999999999999999998653 4589999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 435 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 435 ~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|||.++||+.|..+..+++++|++|.|.||+-.. ...++||||+|.||+||.+|.+||+..+..|+|...
T Consensus 461 fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 461 FGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred ccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 9999999999999999999999999999999655 457899999999999999999999999999999664
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-83 Score=623.85 Aligned_cols=452 Identities=37% Similarity=0.615 Sum_probs=423.2
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHh
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAH 109 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~ 109 (509)
++.+.||+|+++++++++++..+||.++++|++++.++..|+++|+.+|+.||+ .|++++..+|.+.|.+++++++++
T Consensus 420 ~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h 499 (881)
T KOG2452|consen 420 MPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQH 499 (881)
T ss_pred CcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhc
Confidence 456789999999999999999999999999999999999999999999999996 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCC--CC-ceeEEEeecceEEEEEcCCChhHHH
Q 010482 110 KEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATL--PD-RRLFVLKQPVGVAGAITPWNFPLAM 185 (509)
Q Consensus 110 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~P~GVv~~i~p~n~P~~~ 185 (509)
+++|+.+.+++.|.....|. .-+...++.+|||+.|++++.|.+.|... |. ..+.+.++|+|||++|+|||||+.+
T Consensus 500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmm 579 (881)
T KOG2452|consen 500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMM 579 (881)
T ss_pred cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHH
Confidence 99999999999998887775 36778899999999999999999887643 33 4567899999999999999999999
Q ss_pred HHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHH
Q 010482 186 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265 (509)
Q Consensus 186 ~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 265 (509)
+.|+.+.+|++- ...+++ -.|++|+++|.++-+|+.|..||+|+.|-||||+++|+.|+
T Consensus 580 lswk~aaclaa~--------------~~k~~e-------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im 638 (881)
T KOG2452|consen 580 LSWKTAACLAAQ--------------VLKFAE-------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 638 (881)
T ss_pred HHHHHHHHHHHH--------------Hhhhhh-------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHH
Confidence 999999998631 112222 24889999999999999999999999999999999999999
Q ss_pred HHhh-cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCC
Q 010482 266 AGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 344 (509)
Q Consensus 266 ~~~~-~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p 344 (509)
+.|+ .+.|+++|||||++|+|++.|+|+++|+..-..+.|++-|..|++..|+||.++++|+|+.+++++++++++|+|
T Consensus 639 ~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~p 718 (881)
T KOG2452|consen 639 KSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNP 718 (881)
T ss_pred HHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCc
Confidence 9998 467999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCC--
Q 010482 345 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT-- 422 (509)
Q Consensus 345 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~-- 422 (509)
+|.+++-||.-..++..++.+|++.+++.||++.+||++.+..|+|++|||+.+++.+|.+..||-||||+.|.+|+|
T Consensus 719 ldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d 798 (881)
T KOG2452|consen 719 LDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGD 798 (881)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCC
Confidence 999999999999999999999999999999999999998876789999999999999999999999999999999985
Q ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 423 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 423 ~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
.|+.++.+|++++||+++|||+|...+.+++++|++|+|+||+..-.+-..||||+|+||+|...|.++|.+|...|+|+
T Consensus 799 ~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit 878 (881)
T KOG2452|consen 799 LDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVT 878 (881)
T ss_pred HHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEE
Confidence 68999999999999999999999999999999999999999999888889999999999999999999999999999998
Q ss_pred Ee
Q 010482 503 LG 504 (509)
Q Consensus 503 ~~ 504 (509)
+.
T Consensus 879 ~e 880 (881)
T KOG2452|consen 879 FE 880 (881)
T ss_pred ee
Confidence 74
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-82 Score=659.28 Aligned_cols=393 Identities=22% Similarity=0.253 Sum_probs=347.4
Q ss_pred HHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhh
Q 010482 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 150 (509)
Q Consensus 71 ~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~ 150 (509)
+|++.|+++|++||+.|+++|.++|.++|+++++.|+++.++|++++++|+|||..++. ++.+++++.......
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~~~~ 77 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTPGTE 77 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcCccc
Confidence 68999999999999999999999999999999999999999999999999999998763 345555554221110
Q ss_pred ccccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHH----HHcCC
Q 010482 151 GEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGI 224 (509)
Q Consensus 151 ~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l----~~aGl 224 (509)
...+. ..++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++ .++|+
T Consensus 78 -~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGl 156 (429)
T cd07121 78 -DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGG 156 (429)
T ss_pred -ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCC
Confidence 00010 112234578899999999999999999999999999999999999999999999999999877 58899
Q ss_pred CCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHH
Q 010482 225 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 304 (509)
Q Consensus 225 P~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~ 304 (509)
|+|++|+++|++.+.++.|++||+|++|+||||+++|+.|++. .+|+++|+|||||+||++|||++.|++.+++++
T Consensus 157 P~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~ 232 (429)
T cd07121 157 PDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGA 232 (429)
T ss_pred CcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhcc
Confidence 9999999998777889999999999999999999999999875 499999999999999999999999999999999
Q ss_pred hhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC--CCEEEeCCc
Q 010482 305 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK--GAKVLLGGR 382 (509)
Q Consensus 305 ~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~--Ga~~~~gg~ 382 (509)
|+|+||.|++++|+|||+++||+|+++|+++ . .+++++.+++++.++++++++. |+++++||.
T Consensus 233 ~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~ 297 (429)
T cd07121 233 SFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKD 297 (429)
T ss_pred cccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcC
Confidence 9999999999999999999999999999986 1 1478999999999999999864 799999986
Q ss_pred cc---CCCCceee---cEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEEcCCHHHHHHHHh
Q 010482 383 RH---SLGMTFYE---PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWRVSE 454 (509)
Q Consensus 383 ~~---~~~g~~~~---Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl--~asv~t~d~~~~~~~~~ 454 (509)
.. ...|+|++ |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++++++++
T Consensus 298 ~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~ 377 (429)
T cd07121 298 ASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMAR 377 (429)
T ss_pred HHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHh
Confidence 41 11367776 599999999999999999999999999999999999999999999 99999999999999999
Q ss_pred hccceEEEECCCCCCCCCCCccCCCCCCC--CCCChHHHH
Q 010482 455 ALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREGSKYGM 492 (509)
Q Consensus 455 ~l~~G~v~iN~~~~~~~~~pfGG~k~SG~--G~~~g~~~l 492 (509)
++++|+||||++.. +.+||||+|.|++ |.+-| +|+
T Consensus 378 ~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~ 414 (429)
T cd07121 378 AMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL 414 (429)
T ss_pred hCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc
Confidence 99999999998755 6799999999998 54433 443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=647.96 Aligned_cols=408 Identities=18% Similarity=0.222 Sum_probs=351.0
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHH--HHHHHHHHHHhhh
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK--FIEFYAEEAKRVY 150 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~--~l~~~~~~~~~~~ 150 (509)
+++|+++|++||+.|+++|+++|.++|+++++.|++++++|++++++|+|||+.+++.++..++. ..++++.. ..
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence 47899999999999999999999999999999999999999999999999999999876665543 22333321 12
Q ss_pred ccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHH----HcCCCC
Q 010482 151 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPP 226 (509)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~----~aGlP~ 226 (509)
+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|+
T Consensus 78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 2222211 23446899999999999999999999999999999999999999999999999988888774 789999
Q ss_pred ccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhh
Q 010482 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 306 (509)
Q Consensus 227 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~ 306 (509)
|++|+|+|.+.++++.|+.||+|++|+||||++ +++.+++++||+++|+|||+|+||++|||++.|++.+++++|.
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 999999987778999999999999999999998 4667778899999999999999999999999999999999999
Q ss_pred ccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCc-c-c
Q 010482 307 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-R-H 384 (509)
Q Consensus 307 ~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~-~ 384 (509)
|+||.|++.+|+|||+++||+|+++|.+++ ||+++.++++++.++|+++..+|++++.|+. . .
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~ 297 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIA 297 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHH
Confidence 999999999999999999999999999973 8999999999999999999999998764432 1 1
Q ss_pred CCCCceeecE---EEecCC--CCCcccccccccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEEcCC---HHHHHHH
Q 010482 385 SLGMTFYEPT---VLSNVK--SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNN---LQRTWRV 452 (509)
Q Consensus 385 ~~~g~~~~Pt---vl~~~~--~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~----~~gl~asv~t~d---~~~~~~~ 452 (509)
...|+|++|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++
T Consensus 298 ~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~ 377 (439)
T cd07081 298 AAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQF 377 (439)
T ss_pred HHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHH
Confidence 1247899998 999888 999999999999999999999999999999965 799999999999 9999999
Q ss_pred HhhccceEEEECCCC-CCC--CCCCccCCCCC--CCCCCChH-----HHHHhhheeeEEEE
Q 010482 453 SEALEYGLVGVNEGL-IST--EVAPFGGVKQS--GLGREGSK-----YGMDEFLEIKYVCL 503 (509)
Q Consensus 453 ~~~l~~G~v~iN~~~-~~~--~~~pfGG~k~S--G~G~~~g~-----~~l~~~~~~k~~~~ 503 (509)
++++++|+||||.+. ... ...-|||++.+ |.|..+|. -+..+|++.|.+..
T Consensus 378 a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 378 ANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999765 322 34456666655 33433332 24678888887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-80 Score=646.25 Aligned_cols=408 Identities=21% Similarity=0.215 Sum_probs=353.8
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHH
Q 010482 67 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 146 (509)
Q Consensus 67 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~ 146 (509)
....+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++. ..+++++...
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHh
Confidence 3578899999999999999999999999999999999999999999999999999999998753 2344444433
Q ss_pred Hhhhccc-cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHH----H
Q 010482 147 KRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----Q 221 (509)
Q Consensus 147 ~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~----~ 221 (509)
....... ......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++. +
T Consensus 106 ~~~~~~~~~~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~e 185 (465)
T PRK15398 106 PGVEDLTTEALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVA 185 (465)
T ss_pred ccccccccCcccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 1111100 0011123456788999999999999999999999999999999999999999999999999998875 6
Q ss_pred cCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHH
Q 010482 222 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL 301 (509)
Q Consensus 222 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~ 301 (509)
+|+|+|++|++++.+.+.++.|++||+|++|+||||+++|+.|++ ..+|+++|+|||||+||++|||++.|++.++
T Consensus 186 aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~ 261 (465)
T PRK15398 186 AGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARDIV 261 (465)
T ss_pred cCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHHHH
Confidence 999999999999877778999999999999999999999999998 3689999999999999999999999999999
Q ss_pred HHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCC
Q 010482 302 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 381 (509)
Q Consensus 302 ~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg 381 (509)
+|+|.|+||.|++++|||||+++||+|+++|+++. +|++++.+++++.++++++.+++++++.||
T Consensus 262 ~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~ 326 (465)
T PRK15398 262 KGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGK 326 (465)
T ss_pred HhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCC
Confidence 99999999999999999999999999999999861 278999999999999996544566777776
Q ss_pred ccc---CCCCcee---ecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEEcCCHHHHHHHH
Q 010482 382 RRH---SLGMTFY---EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWRVS 453 (509)
Q Consensus 382 ~~~---~~~g~~~---~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl--~asv~t~d~~~~~~~~ 453 (509)
... ...|+|+ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+++++++
T Consensus 327 ~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a 406 (465)
T PRK15398 327 DAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMA 406 (465)
T ss_pred CHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHH
Confidence 431 1124555 4899999999999999999999999999999999999999999998 9999999999999999
Q ss_pred hhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 454 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 454 ~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+++++|+||||++.. +.+||||+|.|.+- .+|+.| ...|..|+++.
T Consensus 407 ~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~ 452 (465)
T PRK15398 407 RAIQTSIFVKNGPSY--AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTR 452 (465)
T ss_pred HhCCceEEEECCCCc--cccCcCCCCCceee-ecccCC-CCccchhhhhh
Confidence 999999999998753 67999999999862 136666 66677666644
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-79 Score=633.14 Aligned_cols=386 Identities=21% Similarity=0.244 Sum_probs=342.1
Q ss_pred HHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHh--------hHHHHHHHH
Q 010482 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAKF 138 (509)
Q Consensus 71 ~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~~ 138 (509)
.|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999988877753 443 588999999
Q ss_pred HHHHHHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHH
Q 010482 139 IEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216 (509)
Q Consensus 139 l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~ 216 (509)
+++++.+.... +...+.. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++
T Consensus 84 ~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 84 LRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 99998776542 3332221 12335789999999999999986 4 678899999999999999999999999999988
Q ss_pred HHH----HHcCCCCccEEeecCCc-hhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 217 ELA----LQAGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 217 ~~l----~~aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
+++ .++|+|+|++|+|+|.+ .+.+..|..||+|++|+||||+++|+.|++.+ ++|+++|||||||+||++||
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA 237 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA 237 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence 874 79999999999999644 45788899999999999999999999999865 69999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|++.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 238 dl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------- 287 (417)
T PRK00197 238 DLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------- 287 (417)
T ss_pred CHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------------
Confidence 999999999999999999 99999999999999999999999999988542
Q ss_pred HCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHH
Q 010482 372 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~ 451 (509)
++ |+... .+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 288 -----~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~ 354 (417)
T PRK00197 288 -----LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER 354 (417)
T ss_pred -----Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 11 11110 11 33 9998 4689999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCCccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 010482 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 452 ~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++|+||||++....+..||||.|.||+| +++|.+|+++||+.|++++++
T Consensus 355 ~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 355 FLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 999999999999998776678999999999999 999999999999999998865
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-79 Score=632.64 Aligned_cols=382 Identities=20% Similarity=0.225 Sum_probs=338.6
Q ss_pred HHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------hhHHHHHHHHHHHH
Q 010482 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EA--------VGEVDYGAKFIEFY 142 (509)
Q Consensus 75 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~l~~~ 142 (509)
..+++|++||+.|+++|.++|.++|.++++.|++++++|+++++.|+||+.. ++ ..|++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777666643 33 25899999999999
Q ss_pred HHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHH
Q 010482 143 AEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL 220 (509)
Q Consensus 143 ~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~ 220 (509)
+...+. .+...+.. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 82 a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 876542 23322221 1233567899999999999996 56 6788999999999999999999999999999998886
Q ss_pred ----HcCCCCccEEeecCCch-hhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHH
Q 010482 221 ----QAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNV 295 (509)
Q Consensus 221 ----~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~ 295 (509)
++|+|+|++|+++|.+. ++++.|.+||+|++|+||||+++|+.|++.+ ++|+++|||||||+||++|||++.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 89999999999998544 6788899999999999999999999999877 699999999999999999999999
Q ss_pred HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCC
Q 010482 296 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 375 (509)
Q Consensus 296 a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga 375 (509)
|++.+++++|.|+| .|++++|||||+++||+|+++|++++++ .|+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence 99999999999999 9999999999999999999999998775 256
Q ss_pred EEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhh
Q 010482 376 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 455 (509)
Q Consensus 376 ~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~ 455 (509)
+++.|+... .|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++++
T Consensus 281 ~~~~g~~~~----~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~ 352 (406)
T cd07079 281 ELRGDEETL----AILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLRE 352 (406)
T ss_pred EEecCHHHH----Hhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHh
Confidence 755333221 478888 789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEECCCCCCCCCCCccCCCCCCC----CCCChHHHHHhhheeeEEEEec
Q 010482 456 LEYGLVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 456 l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++|+||||++....+.+||||.|+||+ |+++|.+++++||+.|++++++
T Consensus 353 ~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~ 406 (406)
T cd07079 353 VDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD 406 (406)
T ss_pred CCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence 9999999999877666789999999998 9999999999999999998764
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-77 Score=653.69 Aligned_cols=381 Identities=20% Similarity=0.208 Sum_probs=343.4
Q ss_pred HHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCHHHH----hhHHHHHHHH
Q 010482 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI------TLEQG--KPLKEA----VGEVDYGAKF 138 (509)
Q Consensus 71 ~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~ev~~~~~~ 138 (509)
.++++++++|++||+.|+++|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888776 4599999999
Q ss_pred HHHHHHHHHhhhccccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHH
Q 010482 139 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216 (509)
Q Consensus 139 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~ 216 (509)
++|++.. .+..+...+. ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..|+
T Consensus 374 ~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 9999987 3444443331 122334688999999999999999 99998 99999999999999999999999999999
Q ss_pred HHHHHcCCCCcc----EEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCC
Q 010482 217 ELALQAGIPPGV----VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 292 (509)
Q Consensus 217 ~~l~~aGlP~gv----v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daD 292 (509)
+++.++ +|+|+ +|+|+| +.++++.|..||+|++|+||||+.. +.+.++.++||+++|+|||||+||++|||
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DAD 525 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSAD 525 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCC
Confidence 999999 99996 999998 5688999999999999999999964 45555567899999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 010482 293 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 372 (509)
Q Consensus 293 l~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 372 (509)
++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|+++++
T Consensus 526 ld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~ 571 (718)
T PLN02418 526 MDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRS 571 (718)
T ss_pred HHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHHHH
Confidence 999999999999999 9999999999999999997 2 35889999999
Q ss_pred CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHH
Q 010482 373 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452 (509)
Q Consensus 373 ~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~ 452 (509)
+||++ +||.... | ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 572 ~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~ 640 (718)
T PLN02418 572 AGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIF 640 (718)
T ss_pred CCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHH
Confidence 99999 6886531 3 233 3 7899999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCCccCCCCCCC--CCCC--hHHHHHhhheeeEEEEe
Q 010482 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREG--SKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 453 ~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~--G~~~--g~~~l~~~~~~k~~~~~ 504 (509)
++++++|.||||++....+..||||+|+||+ ||++ |++||++||+.|+++++
T Consensus 641 a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 641 LRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 9999999999999876667789999999999 9885 99999999999999886
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-76 Score=624.14 Aligned_cols=414 Identities=18% Similarity=0.205 Sum_probs=362.7
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHH
Q 010482 67 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEE 145 (509)
Q Consensus 67 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 145 (509)
..+.+|++.++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..+++. +...+...+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999999999999999999999988764 233345555554442
Q ss_pred HHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHH----HHHHHHH
Q 010482 146 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA----AAELALQ 221 (509)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~----l~~~l~~ 221 (509)
.+. .+... ...+...+..++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|.++.. |.++|.+
T Consensus 84 ~~~-~G~~~--~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKT-IGILS--EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Ccc-cceec--CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 222 22211 1234556789999999999999999999999999999999999999999999999998 4555689
Q ss_pred cCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHH
Q 010482 222 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL 301 (509)
Q Consensus 222 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~ 301 (509)
+|+|+|++|++++.+.+.++.|++||+|++|.||||+..++.+ +.+.+|+++|+|||+|+||++|||++.|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 9999999999998778899999999999999999999976544 446799999999999999999999999999999
Q ss_pred HHHhhccCCccccCCeEEEehhhHHHHHHHHHHH-------HhccccCCC-CCCCcccCcccCHHHHHHHHHHHHHHHHC
Q 010482 302 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA-------VKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSK 373 (509)
Q Consensus 302 ~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~-------~~~~~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 373 (509)
+|+|+|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| .++++++||+++..+++++.++++.++.+
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 9999999999999999999999999999999998 899999996 67899999999999999999999999999
Q ss_pred CCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEEcCCHHHH
Q 010482 374 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 374 Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~----~~~gl~asv~t~d~~~~ 449 (509)
|+++++||.. .++++|++ ++|.||||++|++|+|+||||+++|+ ++|||+++|||+|.+++
T Consensus 317 gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a 381 (488)
T TIGR02518 317 DAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIV 381 (488)
T ss_pred CCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHH
Confidence 9999999852 25678886 79999999999999999999999887 69999999999999999
Q ss_pred HHHHhhccceEEEECCCCC------CCCCCC-----ccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 450 WRVSEALEYGLVGVNEGLI------STEVAP-----FGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 450 ~~~~~~l~~G~v~iN~~~~------~~~~~p-----fGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|++++++|+||||++.. .....| ||+++.++.. .+-+++++++.|+|..+-
T Consensus 382 ~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 382 REFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 9999999999999996542 112233 7777777766 388999999999987653
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-77 Score=619.96 Aligned_cols=408 Identities=21% Similarity=0.270 Sum_probs=350.6
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHH-HHHHHHHHHHhhh
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAK-FIEFYAEEAKRVY 150 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~~~~~~~~~ 150 (509)
++.|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||+.+++. |+..+++ .+++++.. +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 7888887 77887752 222
Q ss_pred ccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHH----HHcCCCC
Q 010482 151 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPP 226 (509)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l----~~aGlP~ 226 (509)
+.... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++ .++|+|+
T Consensus 79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 22211 12345688999999999999999999999999999999999999999999999999888776 4799999
Q ss_pred ccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhh
Q 010482 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 306 (509)
Q Consensus 227 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~ 306 (509)
|++|+++|.+.+.++.|++||+|+.|+||||+++++ .++++++|+++|+|||||+||++|||++.|++.+++|+|.
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 999999987778899999999999999999999764 4566789999999999999999999999999999999999
Q ss_pred ccCCccccCCeEEEehhhHHHHHHHHHHHHhcc-------ccCCC-CCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEE
Q 010482 307 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378 (509)
Q Consensus 307 ~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~-------~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~ 378 (509)
|+||.|++++|+|||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++.+++..++.+|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 999999999999999999999999999999887 89999 4778899999999999988888777777777777
Q ss_pred eCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEEcCCHHHHHHHHh
Q 010482 379 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNNLQRTWRVSE 454 (509)
Q Consensus 379 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~----~~gl~asv~t~d~~~~~~~~~ 454 (509)
.++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||+++|||+|.++++++++
T Consensus 313 ~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~ 377 (436)
T cd07122 313 VAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFAL 377 (436)
T ss_pred EEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHh
Confidence 544 45788899987 56799999999999999999999997 899999999999999999999
Q ss_pred hccceEEEECCCCC-CCCCCCccCCCCC--------CCCCCChHHHHHhhheeeEEEE
Q 010482 455 ALEYGLVGVNEGLI-STEVAPFGGVKQS--------GLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 455 ~l~~G~v~iN~~~~-~~~~~pfGG~k~S--------G~G~~~g~~~l~~~~~~k~~~~ 503 (509)
++++|+||||+++. ..-+.-++|...| |.+...+.-+..+|++.|+|.+
T Consensus 378 ~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 378 RMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred hCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 99999999998764 1111112211111 2222233356788888887753
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-77 Score=594.60 Aligned_cols=451 Identities=30% Similarity=0.457 Sum_probs=412.9
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
..+++|+.+. .++..+++||++ .+++++|..++.+|+++|++.|.+|++.|..+|+.+|+++|++++++|+.+..+|
T Consensus 115 ~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L 192 (769)
T COG4230 115 APIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQL 192 (769)
T ss_pred ccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888776 478899999997 5689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
..++.+|-||+...+..|+.++++++|||+.++++-.++ ...+|+|.+++|+|||||+.+...+++.|
T Consensus 193 ~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGqiaAA 260 (769)
T COG4230 193 MGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQIAAA 260 (769)
T ss_pred HHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhHHHHH
Confidence 999999999999999999999999999999988753221 35679999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC--
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-- 271 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-- 271 (509)
|++||+|+-||.++||+.+..-.++|+++|+|++++++++|+|..+|..|+.++++++|+||||+++++.|.+..+++
T Consensus 261 L~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g 340 (769)
T COG4230 261 LAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG 340 (769)
T ss_pred HHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998863
Q ss_pred -CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 272 -VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 272 -~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
..|++.|.||-|.+||+.+|=-++++..++.|+|..+||+|++.+.+++++++.|..++.|+-.+..+++|+|..-.++
T Consensus 341 ~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tD 420 (769)
T COG4230 341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTD 420 (769)
T ss_pred CCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecc
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeC--CHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEEAI 427 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~--~~~eai 427 (509)
+||+|+..+.+.+.++|+..+.+|-.+..-....+ ..|.|+.||+++-..- .-++.|+||||+.|++|+ ++++.|
T Consensus 421 VGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~--~eL~rEVFGPVLHVvRy~~~~l~~vi 498 (769)
T COG4230 421 VGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENL--DELQREVFGPVLHVVRYKRDELDEVI 498 (769)
T ss_pred ccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCH--HHHHHHhccceeEEEEecHHHHHHHH
Confidence 99999999999999999998888754433222222 3589999999974322 236889999999999997 578999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCCccCCCCCCCCC-CChHHHHHhhheeeEE
Q 010482 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYV 501 (509)
Q Consensus 428 ~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G~-~~g~~~l~~~~~~k~~ 501 (509)
+-+|.++|||+.+|+|+-.+.+.++.+++++|++|||.-..+. ..+||||-+.||.|- -||+.+|..|+..+..
T Consensus 499 ~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 499 DQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred HHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999876643 579999999999995 4999999999976654
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-77 Score=576.77 Aligned_cols=423 Identities=31% Similarity=0.494 Sum_probs=383.4
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhc
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG 151 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 151 (509)
+++.++.++.+|.+-+..|.+.|.+.|+++...++++.+++.+++..|.+|+..++. .|+...+..++++....+.--.
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 455689999999999999999999999999999999999999999999999999985 4777777777766655443211
Q ss_pred cc-cC--CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCcc
Q 010482 152 EI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 228 (509)
Q Consensus 152 ~~-~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gv 228 (509)
.. .. ........++..+|+|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++..|++++-+. +++++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 11 11 1112356789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhcc
Q 010482 229 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 308 (509)
Q Consensus 229 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~ 308 (509)
+.+|.|.-++. ..|+.| +.|.|.||||+.+|+.|+.+++++++|++||||||+|++|++|+|++-+++.|+|+++.|+
T Consensus 163 ~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~ 240 (477)
T KOG2456|consen 163 IRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNS 240 (477)
T ss_pred EEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccC
Confidence 99999954554 456666 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCC
Q 010482 309 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388 (509)
Q Consensus 309 GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g 388 (509)
||.|.+++.|+++.+++++|+++++..++.+ .|+...++.+++-+|+..+++|+..++++- .+++.||..+. ..
T Consensus 241 GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~-~d 314 (477)
T KOG2456|consen 241 GQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE-SD 314 (477)
T ss_pred CCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-hh
Confidence 9999999999999999999999999999998 788888899999999999999999998842 68999998764 34
Q ss_pred ceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 010482 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 468 (509)
Q Consensus 389 ~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~ 468 (509)
.|++|||+.+++++.++|+||+||||++|+.++|.+|+|+.+|+-+--|++++||+|.....|+.+++.+|.|.+|+..+
T Consensus 315 ~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~ 394 (477)
T KOG2456|consen 315 RYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIM 394 (477)
T ss_pred cccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred --CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 469 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 469 --~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
....+||||++.||+|+++|.++++.|++.|++..+
T Consensus 395 H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 395 HVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred EEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 457899999999999999999999999999988654
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=577.74 Aligned_cols=466 Identities=25% Similarity=0.368 Sum_probs=424.2
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHH-HhH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM-AHK 110 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~-~~~ 110 (509)
.....|||+.+.. ........|.+ ..+++.+..++.+++++||++|.+|++.|..+|..+|.+|++++|+++. +++
T Consensus 59 evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr 136 (561)
T KOG2455|consen 59 EVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYR 136 (561)
T ss_pred eccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHH
Confidence 4568999999984 44577788886 6789999999999999999999999999999999999999999999999 788
Q ss_pred HHHHHHHHHHcCCCHHHHhhH-HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecc-eEEEEEcCCChhHHHHHH
Q 010482 111 EELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMITR 188 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~ 188 (509)
-+|.....+..||...+|+-+ +.+.++++|+.+..+..+.........++.++...++|+ |.|+.|+||||.....-.
T Consensus 137 ~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnL 216 (561)
T KOG2455|consen 137 YDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNL 216 (561)
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeecccc
Confidence 888888999999999999654 567788889888888777665444435667777888887 999999999998766667
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
..+||| +||+|+||||..+.++.+.+.++|+|||||+|++|+|+++++.+++.+..+|++.++.||||+.+-|.+.+..
T Consensus 217 a~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V 295 (561)
T KOG2455|consen 217 AGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKV 295 (561)
T ss_pred ccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHH
Confidence 778888 6999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcC------CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccC
Q 010482 269 AGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 342 (509)
Q Consensus 269 ~~~------~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G 342 (509)
+++ ..+++.|+||||..+|+++||++.++...++++|.++||.|++.+|+||++++++.+.+.|.+..+++++|
T Consensus 296 ~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~ig 375 (561)
T KOG2455|consen 296 GENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIG 375 (561)
T ss_pred HhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccC
Confidence 875 46889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEe
Q 010482 343 DG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 420 (509)
Q Consensus 343 ~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~ 420 (509)
|| .|.++++||+|+...++|++++|+.|+. ...++++||+.++..|+|+.|||+..-+|.++++.||+||||++|+.|
T Consensus 376 d~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY 455 (561)
T KOG2455|consen 376 DPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVY 455 (561)
T ss_pred CccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEe
Confidence 98 7889999999999999999999999986 347899999998777999999999999999999999999999999999
Q ss_pred CC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCCC--CCCCccCCCCCCCCCC-ChHHHH
Q 010482 421 KT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIST--EVAPFGGVKQSGLGRE-GSKYGM 492 (509)
Q Consensus 421 ~~--~~eai~l~-n~~~~gl~asv~t~d~~~~~~~~~~l~--~G~v~iN~~~~~~--~~~pfGG~k~SG~G~~-~g~~~l 492 (509)
+| ++|+++++ |.++|||+.+||+.|.+.+.+..++|+ +|+.|||+-.+++ ..+||||.+.||.... ||+..+
T Consensus 456 ~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l 535 (561)
T KOG2455|consen 456 EDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYL 535 (561)
T ss_pred ccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEE
Confidence 86 68999997 779999999999999999999999988 9999999855533 6899999999999854 899989
Q ss_pred HhhheeeEE
Q 010482 493 DEFLEIKYV 501 (509)
Q Consensus 493 ~~~~~~k~~ 501 (509)
..|+.+++|
T Consensus 536 ~RwtSp~~i 544 (561)
T KOG2455|consen 536 LRWTSPLSI 544 (561)
T ss_pred EeecCcchh
Confidence 999888765
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-74 Score=645.50 Aligned_cols=417 Identities=21% Similarity=0.245 Sum_probs=365.1
Q ss_pred EEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHH
Q 010482 64 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 142 (509)
Q Consensus 64 ~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 142 (509)
.+...+.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. ++..++..++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 3566899999999999999999999999999999999999999999999999999999999999875 444444444443
Q ss_pred HHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHH--
Q 010482 143 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 220 (509)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~-- 220 (509)
.. ..+..+.. . ..+....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 85 ~~-~~~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGVI-E-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCccccc-C-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 32 11222221 1 1123456889999999999999999999999999999999999999999999999998888864
Q ss_pred --HcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHH
Q 010482 221 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVN 298 (509)
Q Consensus 221 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~ 298 (509)
++|+|+|+||+++|.+.+.++.|++|++|+.|+||||+.++ +.++.+++|+++|+|||+|+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 68999999999998778899999999999999999999965 445668999999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEE-
Q 010482 299 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV- 377 (509)
Q Consensus 299 ~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~- 377 (509)
.+++|+|+|+||.|++++|||||+++||+|+++|+++. +|++++.+++++.+++++++..|++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 99999999999999999999999999999999998871 58999999999999999887655532
Q ss_pred EeCCcccC---CCCceeecEE------EecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEEcC
Q 010482 378 LLGGRRHS---LGMTFYEPTV------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTN 444 (509)
Q Consensus 378 ~~gg~~~~---~~g~~~~Ptv------l~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~----~~~gl~asv~t~ 444 (509)
++||.... ..|+|++||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+
T Consensus 303 ~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~ 381 (862)
T PRK13805 303 IVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTN 381 (862)
T ss_pred ccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 44664211 2368889997 678999999887 799999999999999999999988 589999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCC----------CCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 445 NLQRTWRVSEALEYGLVGVNEGL----------ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~----------~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|.+++++|++++++|+||||+++ ...+.+|||| +.||.|+.+|+.|+++|++.|+|..+
T Consensus 382 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 382 DDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred CHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeec
Confidence 99999999999999999999875 3467899997 99999999999999999999998754
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-74 Score=542.09 Aligned_cols=465 Identities=33% Similarity=0.533 Sum_probs=440.0
Q ss_pred eEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 010482 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 116 (509)
Q Consensus 37 ~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 116 (509)
..+|+|.. +++..+.++|++.++|+.+..++.+|.+.+++.|++|++.|-..|...|.+|.+++.|.|+...+-|.++
T Consensus 23 vy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~l 100 (507)
T KOG2453|consen 23 VYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKL 100 (507)
T ss_pred eeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhh
Confidence 34569976 5889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhC
Q 010482 117 ITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 196 (509)
Q Consensus 117 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 196 (509)
+++|+||...|..+|+..-++.++|.....+.+.+.+.|...++.-..-.|.|+|+|++|+.+|||....-|.-+.||.+
T Consensus 101 vslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~ 180 (507)
T KOG2453|consen 101 VSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVC 180 (507)
T ss_pred hhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhh
Confidence 99999999999999999999999999999999999999988888777889999999999999999999999999999999
Q ss_pred CCEEEecCCCCCHHHHHH----HHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 197 GCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 197 GN~vVlkps~~~p~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||+|+|||.+.+|+++.. +.+.|.+--+|++......| +.+.++++..+.+++.+.||||+++++.+.+...+++
T Consensus 181 gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarf 259 (507)
T KOG2453|consen 181 GNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARF 259 (507)
T ss_pred cceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHHHh
Confidence 999999999999998765 44557777899999999998 6789999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
.+..|||||+|+.||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|+|+++.+|
T Consensus 260 gk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~g 339 (507)
T KOG2453|consen 260 GKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIG 339 (507)
T ss_pred hhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|+.++++..+.+.-++++++.|.++++||+..+..|+|++|||++ +.+|.+++.+|.|.||++|.+|++++||+.+-|+
T Consensus 340 plht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainne 418 (507)
T KOG2453|consen 340 PLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNE 418 (507)
T ss_pred cccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccc
Confidence 999999999999999999999999999999887778999999998 9999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCCC-CCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~--l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
.+.||++||||+|..++.+...- -++|.|.||-++... -.-.|||-|..|.||+.|.++.++|++..+.+++-
T Consensus 419 v~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 419 VDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred cccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 99999999999999999998864 569999999988753 46789999999999999999999999988777653
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-72 Score=584.66 Aligned_cols=373 Identities=17% Similarity=0.173 Sum_probs=338.0
Q ss_pred HHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-----------hHHHHHHHHHHHHHHHH
Q 010482 78 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-----------GEVDYGAKFIEFYAEEA 146 (509)
Q Consensus 78 ~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~~~~~ 146 (509)
++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999999999999975543 48899999999988765
Q ss_pred HhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHc---C
Q 010482 147 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA---G 223 (509)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~a---G 223 (509)
.+..+...+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++.++ |
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 5444332221 2356899999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHH
Q 010482 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 303 (509)
Q Consensus 224 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~ 303 (509)
+|+++++++++.+.++++.|+.||+++.|+||||+++++.+.+.+. .+|+++|+||++|+||++|||++.|++.++++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 9999999999877789999999999999999999999999988774 68999999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Q 010482 304 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383 (509)
Q Consensus 304 ~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 383 (509)
+|.| ||.|++++|||||+++||+|+++|+++++. +|++++.||.
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~- 278 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK- 278 (397)
T ss_pred hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-
Confidence 9999 999999999999999999999999998764 5777777663
Q ss_pred cCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHH----HHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccce
Q 010482 384 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 459 (509)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~----eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G 459 (509)
++|+.|| ++|++.+||+||||++|++|+|+| +|++++|+++|||+++|||+|.++++++++++++|
T Consensus 279 ----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G 348 (397)
T cd07077 279 ----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTA 348 (397)
T ss_pred ----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEE
Confidence 3677786 789999999999999999999996 66678899999999999999999999999999999
Q ss_pred EEEECCCCCCC--CCCCccCCC--CCCCCCCCh-HHHHHhhheeeEEE
Q 010482 460 LVGVNEGLIST--EVAPFGGVK--QSGLGREGS-KYGMDEFLEIKYVC 502 (509)
Q Consensus 460 ~v~iN~~~~~~--~~~pfGG~k--~SG~G~~~g-~~~l~~~~~~k~~~ 502 (509)
+||||++.... ..+||||.| .||+|+++| .+++++|++.|++.
T Consensus 349 ~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 349 SFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999877643 678999999 899999999 99999999999874
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-71 Score=569.68 Aligned_cols=364 Identities=52% Similarity=0.829 Sum_probs=346.0
Q ss_pred HHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 010482 79 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 158 (509)
Q Consensus 79 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 158 (509)
+|++|++.|++++.++|.++|+++++.|.+++++|++++++|+|||+.+++.|+..+++.+++++....+..+...+...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 67899999999999999999999999999999999999999999999999999999999999999988776653333333
Q ss_pred CCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchh
Q 010482 159 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPD 238 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~ 238 (509)
.+...+++++|+||+++|.|||+|+...++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++|++++
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999997777
Q ss_pred hhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeE
Q 010482 239 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 318 (509)
Q Consensus 239 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv 318 (509)
+++.|+.|++++.|.||||.++++.|.+.++++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++++|
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v 241 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEec
Q 010482 319 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 398 (509)
Q Consensus 319 ~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 398 (509)
|||++++|+|+++|+ ||+.+
T Consensus 242 ~v~~~~~~~f~~~l~------------------------------------------------------------tl~~~ 261 (367)
T cd06534 242 LVHESIYDEFVEKLV------------------------------------------------------------TVLVD 261 (367)
T ss_pred EEcHHHHHHHHHhhc------------------------------------------------------------eeeeC
Confidence 999999999999998 67778
Q ss_pred CCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccC
Q 010482 399 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGG 477 (509)
Q Consensus 399 ~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG 477 (509)
+++++++++||+|||+++|++|+|.+|+|+++|++++||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||
T Consensus 262 ~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg 341 (367)
T cd06534 262 VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGG 341 (367)
T ss_pred CCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999998776 78999999
Q ss_pred CCCCCCCCCChHHHHHhhheeeEEE
Q 010482 478 VKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 478 ~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
.|+||+|+++|.+++++||+.|++.
T Consensus 342 ~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 342 VKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred cccCccCCCChHHHHHHhceEEEEe
Confidence 9999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-71 Score=607.22 Aligned_cols=379 Identities=17% Similarity=0.174 Sum_probs=331.3
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh----------------HHHHH
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG----------------EVDYG 135 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------ev~~~ 135 (509)
+++..+++|++||+.|+.+|.++|.++|++++++|++++++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999997 588999887765 47788
Q ss_pred HHHHHHHHHHHHhhhccccCC-C-CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHH
Q 010482 136 AKFIEFYAEEAKRVYGEIIPA-T-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213 (509)
Q Consensus 136 ~~~l~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~ 213 (509)
+..+++++.. .+..+...+. . ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|+++.
T Consensus 363 ~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 8889998873 3333332221 1 11334578999999999999999 9998 589999999999999999999999999
Q ss_pred HHHHHHHHcCCCCc----cEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 214 AAAELALQAGIPPG----VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 214 ~l~~~l~~aGlP~g----vv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
.|++++.++ +|+| ++++|++ ++++++.|..|+++++|+||||+++|+.|++.++ +|+++|+|||||+||++
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~ 514 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK 514 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC
Confidence 999999999 9987 6899985 5678888999999999999999999999998874 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|||++.|++.++.++|.+ ||.|++++|||||+++||+ | .+.+++++
T Consensus 515 dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~ 560 (715)
T TIGR01092 515 SASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDM 560 (715)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHH
Confidence 999999987777776655 9999999999999999985 1 26678888
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~ 449 (509)
++++|++++ ||... . .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 561 ~~~~Ga~l~-Gg~~~--~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a 631 (715)
T TIGR01092 561 LRTEGVTIH-GGPRF--A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVA 631 (715)
T ss_pred HHHCCCEEE-CCcch--h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence 888999985 77543 1 3442 1367899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCC----CChHHHHHhhheeeEEEEec
Q 010482 450 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR----EGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 450 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|++++++|.||||+++...+.+||||+|+||+|+ ++|.+++++||+.|+|.++.
T Consensus 632 ~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 632 EFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred HHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 999999999999999886666788999999999995 48999999999999998763
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-71 Score=570.99 Aligned_cols=375 Identities=19% Similarity=0.154 Sum_probs=322.8
Q ss_pred HHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCH------HHHhhHHHHHHHHHHHHHHHHH
Q 010482 80 AFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPL------KEAVGEVDYGAKFIEFYAEEAK 147 (509)
Q Consensus 80 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~~~~~~ 147 (509)
|++||+.|+++|..+|.++|+++++.|++++++|+++ +++|+|||. .+++.|+..+++.+++++..+.
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3467799999999999998875
Q ss_pred hhhccccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHH----HHH
Q 010482 148 RVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQ 221 (509)
Q Consensus 148 ~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~----l~~ 221 (509)
.. +...+. ..++...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|+++ |.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 53 443332 123556789999999999999997 6 66888999999999999999999999999999999 669
Q ss_pred cCCCCccEEeecCCc-hhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHH
Q 010482 222 AGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGA 300 (509)
Q Consensus 222 aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i 300 (509)
+|+|+|++|+|+|.+ .++++.|..||+|++|+||||+++++.+++. ..+++++|+|||||+||++|||++.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 999999999999754 4578899999999999999999999998875 358999999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeC
Q 010482 301 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 380 (509)
Q Consensus 301 ~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~g 380 (509)
++|+|.+ ||.|++++|+|||+++||+|+++|+++++++++ .+++ .+.+.+++.. |
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g------ 289 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G------ 289 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c------
Confidence 9999965 999999999999999999999999999998643 1222 1334444331 1
Q ss_pred CcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceE
Q 010482 381 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 460 (509)
Q Consensus 381 g~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~ 460 (509)
| ||++ +.+|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++|++++++|.
T Consensus 290 ~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~ 355 (398)
T TIGR00407 290 P-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAA 355 (398)
T ss_pred C-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeE
Confidence 1 3543 2337899999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCccCCCC----CCCCCCChHHHHHhhheee
Q 010482 461 VGVNEGLISTEVAPFGGVKQ----SGLGREGSKYGMDEFLEIK 499 (509)
Q Consensus 461 v~iN~~~~~~~~~pfGG~k~----SG~G~~~g~~~l~~~~~~k 499 (509)
||||+++...+..|||=-.+ ++.....|+.+++.||+.|
T Consensus 356 v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 356 VYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred EEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999988777889972222 2334569999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=303.76 Aligned_cols=362 Identities=16% Similarity=0.117 Sum_probs=267.5
Q ss_pred CHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHH--H
Q 010482 69 GGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM----AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--Y 142 (509)
Q Consensus 69 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~ 142 (509)
+..+++..++..+...+....++.++..+++.++++.+. ..+.+..+.+...+|.+....+..+......++. .
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 456677777777777777888999999999999988886 3466677778888888877666665555555531 1
Q ss_pred HHHHHhhhcc--ccCCCCC-CceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHH
Q 010482 143 AEEAKRVYGE--IIPATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 219 (509)
Q Consensus 143 ~~~~~~~~~~--~~~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l 219 (509)
........+. ......+ +...++.++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.++|
T Consensus 83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l 161 (422)
T cd07080 83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSL 161 (422)
T ss_pred HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHH
Confidence 1111111111 1111222 455688999999999999999999 78999999999999999999999999999999999
Q ss_pred HHcCCCC----ccEEee--cCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCc-eEEcCCC-
Q 010482 220 LQAGIPP----GVVNVV--MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP-CIVFDDA- 291 (509)
Q Consensus 220 ~~aGlP~----gvv~~v--~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~-~iV~~da- 291 (509)
.++ +|+ +.++++ +|.+.++++.|++++ |.|+||||+++++.|++.++.+ +.++|+|||++ +|+.+++
T Consensus 162 ~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~ 236 (422)
T cd07080 162 ADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREAL 236 (422)
T ss_pred Hhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhh
Confidence 999 787 888888 465566889999988 8899999999999999998855 46999999955 5555568
Q ss_pred ---CHHHHHHHHHHHHhhccCCccccCCeEEEehhh---HHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHH
Q 010482 292 ---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI---YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 365 (509)
Q Consensus 292 ---Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v---~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 365 (509)
|++.+++.+++++|.++||.|+|+++||||+++ +++|.++|.++++++.-..|... + +.....++..
T Consensus 237 ~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~------~-~~~~~~~~~~ 309 (422)
T cd07080 237 ESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS------L-SAAESAKIAR 309 (422)
T ss_pred ccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC------C-CHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999998764444321 1 3344444433
Q ss_pred HHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCC
Q 010482 366 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445 (509)
Q Consensus 366 ~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d 445 (509)
.-..+...+.+....+ ..++ ||+...++. +.. ...+=.+.|.++++.+|++..++. |=.|.++|..+
T Consensus 310 ~r~~~~~~~~~~~~~~----~~~~----~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~ 376 (422)
T cd07080 310 ARLEAEFYELKGGVSR----DLGW----TVIISDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSP 376 (422)
T ss_pred HHHHHHHHHHhcCCCC----CCCe----EEEEeCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecCh
Confidence 3332222222111111 1112 233222211 111 344457899999999999999886 77799999999
Q ss_pred HHHHHHHHhhcc
Q 010482 446 LQRTWRVSEALE 457 (509)
Q Consensus 446 ~~~~~~~~~~l~ 457 (509)
.+. .++++++.
T Consensus 377 ~~~-~~~~~~l~ 387 (422)
T cd07080 377 AEL-AELADALA 387 (422)
T ss_pred hhH-HHHHHHHH
Confidence 887 78888876
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-33 Score=271.94 Aligned_cols=385 Identities=19% Similarity=0.234 Sum_probs=298.4
Q ss_pred HHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------cCCCHHHH------hhHHHHHHHH
Q 010482 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLE------QGKPLKEA------VGEVDYGAKF 138 (509)
Q Consensus 71 ~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e------~Gk~~~~a------~~ev~~~~~~ 138 (509)
.++.+..+.|++|......++.++|.+.|.++|+.|+++++++.++...| +|.+-... ...++..++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 35677788999999999999999999999999999999999988866554 44432222 1244555555
Q ss_pred HHHHHHHHHhhhccccC-CC-CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHH
Q 010482 139 IEFYAEEAKRVYGEIIP-AT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216 (509)
Q Consensus 139 l~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~ 216 (509)
++..+...+++ |++.. .. ..+-..+-.+.|+||+++| |..-....+...+-||.+||+||+|.+..+..+...|.
T Consensus 83 l~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 66555444332 22221 12 2356778899999999999 44444567777888999999999999999999988877
Q ss_pred HH----HHHcCCCCccEEeecCCchh-hhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCC
Q 010482 217 EL----ALQAGIPPGVVNVVMGNAPD-IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291 (509)
Q Consensus 217 ~~----l~~aGlP~gvv~~v~g~~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 291 (509)
++ |.++|+|++.|++|+..+++ +.+.|..+..||.|.-.||..--+.+.+.+ ..||+-..-|++.++|+.+|
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a---~vPVi~~~~G~CHiyvd~~A 236 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA---TVPVIEHGVGNCHIYVDESA 236 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC---cCCEEecCcceEEEEecccC
Confidence 66 66789999999999975555 445555578899999999999877777655 35666666699999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 371 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 371 (509)
|+|.|.+-++.++...-+ .|++.+.++||+.+.++|+.+|.+.+..
T Consensus 237 Dld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~--------------------------------- 282 (417)
T COG0014 237 DLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE--------------------------------- 282 (417)
T ss_pred CHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh---------------------------------
Confidence 999999999999999886 9999999999999999999999887663
Q ss_pred HCCCEEEeCCcccCCCCceeecEEEec--CCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q 010482 372 SKGAKVLLGGRRHSLGMTFYEPTVLSN--VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 372 ~~Ga~~~~gg~~~~~~g~~~~Ptvl~~--~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~ 449 (509)
.|.++........ ++.+ .+....-+..|..-+++.|..+++.||||+++|....+++-+|.|+|...+
T Consensus 283 -~gvelr~d~~~~~---------~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a 352 (417)
T COG0014 283 -AGVELRGDAEALA---------LLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANA 352 (417)
T ss_pred -cCeEEEcCHHHHH---------hccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHH
Confidence 2333332221110 0000 122222356788899999999999999999999999999999999999999
Q ss_pred HHHHhhccceEEEECCCCCCCCCCCccCCCCCCC----CCCChHHHHHhhheeeEEEEec
Q 010482 450 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 450 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|.+++++..||||.++.+..+.-||=--+-|+ ..-.|+.||+++|..|++..++
T Consensus 353 ~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 353 ERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred HHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 9999999999999999998877766653223333 3448999999999999998764
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=208.82 Aligned_cols=381 Identities=18% Similarity=0.179 Sum_probs=289.2
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcCCCHHHH-h-----hHHHHHHHHHH
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI------TLEQGKPLKEA-V-----GEVDYGAKFIE 140 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a-~-----~ev~~~~~~l~ 140 (509)
+++..+.|+++....+.++.++|.++|.+++++|..+..++..+. +.++|.....- | ..+......++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 456678899999999999999999999999999998876665533 34556332221 1 23333344444
Q ss_pred HHHHHHHhhhccccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHH
Q 010482 141 FYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 218 (509)
Q Consensus 141 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~ 218 (509)
..+. .+...|++... ...+-..+....|+||.++| |..-...+..-.+.|++.||.+++|-...+..+...|.++
T Consensus 82 ~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 4444 22333333211 12355667788999999999 5444455566667899999999999999999998888877
Q ss_pred HHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHH
Q 010482 219 ALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLN 294 (509)
Q Consensus 219 l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~ 294 (509)
..++ |.|.+.+++|.. ..++.+.|-.+..||.|.-.||..-.+.|..... .||.-+-.|.+.++|+.|||++
T Consensus 159 v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~ 234 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLD 234 (433)
T ss_pred HHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHH
Confidence 6555 779999999987 4678888888899999999999999999887663 8899999999999999999999
Q ss_pred HHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC
Q 010482 295 VAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 373 (509)
Q Consensus 295 ~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v-~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 373 (509)
+|.+-+..+++.+-. .|++++.+++|++. ...|.+.|... +. .+
T Consensus 235 kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~-------------------------------l~---~~ 279 (433)
T KOG4165|consen 235 KAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINM-------------------------------LK---EE 279 (433)
T ss_pred HHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHH-------------------------------HH---hc
Confidence 999988888888764 89999999999973 23333333222 22 35
Q ss_pred CCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Q 010482 374 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 453 (509)
Q Consensus 374 Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~ 453 (509)
|.++.+|.+... - +.--+|...-++.|.-.-.+++-.+++.++||+.+|..+.++|-+|.|+|...+++|.
T Consensus 280 gVtl~agpkl~~-~--------l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl 350 (433)
T KOG4165|consen 280 GVTLHAGPKLAA-L--------LKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL 350 (433)
T ss_pred CeEEecChhHHh-h--------cCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHH
Confidence 555555543321 1 1111455556778888888999999999999999999999999999999999999999
Q ss_pred hhccceEEEECCCCCCCCCCCccCCCCCCCC--C--CChHHHHHhhheeeEEEEe
Q 010482 454 EALEYGLVGVNEGLISTEVAPFGGVKQSGLG--R--EGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 454 ~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G--~--~~g~~~l~~~~~~k~~~~~ 504 (509)
..+++..|+.|..+.+..+.-||=--+-|+. | ..|+-|++-.+.+|++.-+
T Consensus 351 ~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 351 KHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred hccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 9999999999999998888888744455543 2 2888999999999987543
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.7e-16 Score=161.37 Aligned_cols=350 Identities=15% Similarity=0.128 Sum_probs=228.2
Q ss_pred cCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHH--HHHHHHhhhcc--ccCCCCCCce
Q 010482 89 KLTAAERSKGLRKWYDLLMAH--KEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--YAEEAKRVYGE--IIPATLPDRR 162 (509)
Q Consensus 89 ~~~~~~R~~iL~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~~~~~~~~~~~--~~~~~~~~~~ 162 (509)
.+|.++...+|.++++.+... .....+.+..-+|.+....+. ++....+++. .....+...+. ......+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 467777778888888777753 222666677778888777655 5544444421 11111111121 1112223334
Q ss_pred eEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCC----ccEEee--cCCc
Q 010482 163 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP----GVVNVV--MGNA 236 (509)
Q Consensus 163 ~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~----gvv~~v--~g~~ 236 (509)
.+.++.|.|++++|.|.|-|+.. ++.++.+|++||..|+|+|...+.++..|.+.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 67899999999999999999854 455788999999999999999999999999999887 664 445666 4545
Q ss_pred hhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCC
Q 010482 237 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 316 (509)
Q Consensus 237 ~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~ 316 (509)
.++.+.+.++ .|.++.+||.++.+.+.+... ...+.+....-.+-.++..+++++.+++.+..-.+...+|.|.|++
T Consensus 159 ~~~~~~~~~~--~D~vv~wGgd~ti~~ir~~~~-~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~ 235 (399)
T PF05893_consen 159 EELEEALSQQ--ADAVVAWGGDETIRAIRQPLP-PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQ 235 (399)
T ss_pred hHHHHHHHHH--CCEEEEeCCHHHHHHHHHHcC-CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCe
Confidence 6777777754 678999999999999998333 3344444444667788888889999999999999999999999999
Q ss_pred eEEEe---hhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHH-----HHHHCCCEEEeCCcccCCCC
Q 010482 317 RVLVQ---EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE-----DAVSKGAKVLLGGRRHSLGM 388 (509)
Q Consensus 317 rv~V~---~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~-----~a~~~Ga~~~~gg~~~~~~g 388 (509)
.+||. ..-.++|.++|.+.+.+..---|... .+......+....+ .+...+.++..+...
T Consensus 236 ~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----- 303 (399)
T PF05893_consen 236 VIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN----- 303 (399)
T ss_pred EEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC-----
Confidence 99999 34467888888777765421112111 12222222222222 333344444422211
Q ss_pred ceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhc-cceEEEE
Q 010482 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL-EYGLVGV 463 (509)
Q Consensus 389 ~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l-~~G~v~i 463 (509)
. -||+....+ .. ....++=.+.|.++++.+|++..++....=.|.+++... ....++++.+ ..|.--|
T Consensus 304 ~---~~V~~~~~~--~~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 304 S---WTVIVSPEP--PL-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI 372 (399)
T ss_pred C---EEEEECCCc--cc-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee
Confidence 1 134433221 22 223335588999999999999999887432488887665 4455666643 3554333
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.7e-15 Score=123.98 Aligned_cols=146 Identities=25% Similarity=0.350 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHH-HCCCEEEeCCcccCCCCceeecEEEecCCCCC
Q 010482 325 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 403 (509)
Q Consensus 325 ~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~-~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 403 (509)
.....+.|++..+.+++-+...++++. .+..+++.++|+.-. ..|..+..-|- ..|+|+.||+|. +.|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 466778888999999998888888886 567788888888521 12333333232 347999999999 99999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCC
Q 010482 404 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVK 479 (509)
Q Consensus 404 ~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k 479 (509)
.++.||+||||+..+.-+++||+|.++|+++||....|||.+.+.++.+.+..++|.+.+|.+... .+...|.|-+
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 999999999999999999999999999999999999999999999999999999999999986542 3455565544
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.3e-10 Score=104.73 Aligned_cols=171 Identities=22% Similarity=0.252 Sum_probs=129.0
Q ss_pred CceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHH
Q 010482 283 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 362 (509)
Q Consensus 283 ~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 362 (509)
.-+||++|.|++.|+..++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+. +.. .+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~v-----a~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQV-----ANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hhh-----ccCcHHHH
Confidence 348999999999999999999865544 34667899999999999999999987652 221 12233445
Q ss_pred HHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcC--CCCcEEE
Q 010482 363 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT--NAGLAAY 440 (509)
Q Consensus 363 ~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~--~~gl~as 440 (509)
-.+.++ ..+++.+.+.... ...--.|.++.+.+... +.. --.+|+++..|++..||+++.+.. +|+ +.|
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 444444 5789999884332 12344789988766543 333 234799999999999999999875 444 999
Q ss_pred EEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCc
Q 010482 441 IFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPF 475 (509)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pf 475 (509)
||++..+.+.+++.+|++..+|||+.... .|-.++
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~ 179 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPF 179 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhh
Confidence 99999999999999999999999997763 344444
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.5e-07 Score=105.47 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=79.2
Q ss_pred CceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhh
Q 010482 160 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDI 239 (509)
Q Consensus 160 ~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~ 239 (509)
|+.+.....|+|++++|+||| ..++.+++.||++||+||+||++.++. . -+.+|..+.+.+ .+
T Consensus 1069 GEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~-----~~ 1131 (1208)
T PRK11905 1069 GESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI-----DW 1131 (1208)
T ss_pred CcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc-----cc
Confidence 688999999999999999999 457789999999999999999998762 1 123566555544 34
Q ss_pred hhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 240 GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 240 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
+..+..++++++|.|+|++++.+.|.+..+++.
T Consensus 1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905 1132 TQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred ccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence 456888889999999999999999999998775
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.054 Score=55.86 Aligned_cols=258 Identities=22% Similarity=0.261 Sum_probs=122.1
Q ss_pred CCceeEEEeecceEEEEEcCC-ChhHH-HHHHhhhhHhhCCCEE--EecCCCCCHHHHHHHHHHHHHcCCCCccEEeecC
Q 010482 159 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTV--VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 234 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~v--Vlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g 234 (509)
+|.....++.|+--|++..|. .+|+. +++..++||-.+|..= ++-|+...-...-.+.-+.+.+|+-+ +.-+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence 456667899999999999993 34442 3334577999999754 44555443233333445566777743 3323 3
Q ss_pred Cchhhhhhhhc----CCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeec-CCCCceE--EcCCCCHHHHHHHHHHHHhhc
Q 010482 235 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPCI--VFDDADLNVAVNGALAAKFRN 307 (509)
Q Consensus 235 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lel-gG~~~~i--V~~daDl~~a~~~i~~~~~~~ 307 (509)
|.+.-.+|.- -|.||+|+=.|..=+..+=....+ .+-..+ -|.+=++ -+++||.+.++..++.-+=..
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 4444444443 488999998887654333222222 222222 2444433 356789999888877665444
Q ss_pred cCCccccCCeEEEehh--hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC
Q 010482 308 SGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 385 (509)
Q Consensus 308 ~GQ~C~a~~rv~V~~~--v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 385 (509)
.. .+.++|..+ ..++..+.+.+.+..+. .. +.++.+.+
T Consensus 248 ~~-----a~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~-------~i~~~sl~------------- 287 (412)
T PF00815_consen 248 PD-----AQAVLVTTSEELAEAVEAEVERQLEELP---------------RR-------EIAEKSLE------------- 287 (412)
T ss_dssp TT------EEEEEES-HHHHHHHHHHHHHHHTT-T---------------TH-------HHHHHHHT-------------
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------ch-------HHHHHHHH-------------
Confidence 32 334566444 33444444444433331 11 11222221
Q ss_pred CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 010482 386 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 464 (509)
Q Consensus 386 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~-~G~v~iN 464 (509)
+| .++.++|.+||++++|..-- =...|.++|+. .+..+++ +|.|++.
T Consensus 288 -------------------------~g---~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~---~~~~~i~~AGaiFlG 335 (412)
T PF00815_consen 288 -------------------------NG---AIIVVDSLEEAIELANEYAP-EHLELQVEDPE---ELLEKIRNAGAIFLG 335 (412)
T ss_dssp -------------------------T----EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEEES
T ss_pred -------------------------CC---eEEEECCHHHHHHHHHHhhH-HHHHHHHcCHH---HHHHHhhccChhhcC
Confidence 11 45677999999999998532 26778888874 4677776 9999999
Q ss_pred CCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 010482 465 EGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501 (509)
Q Consensus 465 ~~~~---------~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~ 501 (509)
.++. .++.+|-+ |..|..|.-+...|++.-++
T Consensus 336 ~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 336 EYTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp TT--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEEE
T ss_pred CCCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceeeE
Confidence 7654 13456654 45666677788888876543
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.07 Score=54.67 Aligned_cols=257 Identities=22% Similarity=0.260 Sum_probs=145.9
Q ss_pred CCCceeEEEeecceEEEEEcC---CChhHHHHHHhhhhHhhCCCE--EEecCCCCCHHHHHHHHHHHHHcCCCCccEEee
Q 010482 158 LPDRRLFVLKQPVGVAGAITP---WNFPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 232 (509)
Q Consensus 158 ~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~--vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v 232 (509)
.+|..+-.++.|+--|++..| --||-..++ ...||-.+|+. |++-|....- ....+.-+.+.+|+-+ ++. +
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v 180 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V 180 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c
Confidence 456777889999999999999 566654444 46799999985 4456665432 2222223334555542 111 2
Q ss_pred cCCchhhhhhhhcC----CCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCCCHHHHHHHHHHHHh
Q 010482 233 MGNAPDIGDALLTS----PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKF 305 (509)
Q Consensus 233 ~g~~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~daDl~~a~~~i~~~~~ 305 (509)
| |.+.-.+|.-. |.|++|+=.|+.=+.-+=.... ..+-..+- |.+=++| ++++|.+.++..++.-+=
T Consensus 181 -G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~----g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAE 254 (425)
T COG0141 181 -G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVS----GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAE 254 (425)
T ss_pred -c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhh----CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhh
Confidence 3 44555566655 8899998888765432211111 12222222 4443333 555899998887766554
Q ss_pred hccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC
Q 010482 306 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 385 (509)
Q Consensus 306 ~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 385 (509)
.. ...+.++|..+ ++|.++..+++.+.-- . ..+ . +.+.++..
T Consensus 255 Hd-----~~a~aiLvT~s--~~la~~v~~~v~~~l~--------~----l~~--~----ei~~~~l~------------- 296 (425)
T COG0141 255 HD-----PDAQAILVTDS--EELAEAVEAAVERQLE--------T----LPR--A----EIARKALE------------- 296 (425)
T ss_pred cC-----CCceEEEEeCc--HHHHHHHHHHHHHHHH--------h----ccH--H----HHHHHHHH-------------
Confidence 43 22445666554 4444444444432100 0 000 1 11222110
Q ss_pred CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 010482 386 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 464 (509)
Q Consensus 386 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~-~G~v~iN 464 (509)
-|| .|+.++|++|+++++|..-- -...|+++|+.. +..+++ +|.|+++
T Consensus 297 ------------------------~~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~~---~l~~I~nAGsIFlG 345 (425)
T COG0141 297 ------------------------NYG---AIILVDDLDEAVEISNEYAP-EHLELQTENPRE---LLGKIRNAGSIFLG 345 (425)
T ss_pred ------------------------hCC---eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHHH---HHHHhcccceeeec
Confidence 111 45667999999999998532 245677888654 667766 9999999
Q ss_pred CCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhhee
Q 010482 465 EGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEI 498 (509)
Q Consensus 465 ~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~ 498 (509)
.++.. ++.+|- +|+-|..+.-++..|++.
T Consensus 346 ~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~ 383 (425)
T COG0141 346 HYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKR 383 (425)
T ss_pred CCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhH
Confidence 86542 233454 455566666667777654
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.33 Score=49.87 Aligned_cols=284 Identities=21% Similarity=0.232 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCC-hhHHH-HHHhhhhHhhCCCEE--EecCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWN-FPLAM-ITRKVGPALACGCTV--VVKPSE 206 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n-~P~~~-~~~~l~~ALaaGN~v--Vlkps~ 206 (509)
.++.+.+.++.|....... .......+|...-.++.|+--|++..|.- +|+.+ ++....||-.+|..= ++-|+.
T Consensus 56 ai~~A~~nI~~fh~~q~~~--~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~ 133 (390)
T cd06572 56 AIELAAENIRAFHEAQLPK--DWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPR 133 (390)
T ss_pred HHHHHHHHHHHHHHHhCCC--CeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcC
Confidence 4455556665555433221 11111224677778999999999999953 44433 334578999999854 445553
Q ss_pred CCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-C
Q 010482 207 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-G 281 (509)
Q Consensus 207 ~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G 281 (509)
......-.+.-+.+.+|.-+ +.-+ | |.+...+|. ..|.||+|+=.|..=+..+=.... ..+-..+- |
T Consensus 134 ~~g~i~p~iL~aa~~~Gv~e--iy~v-G-GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AG 205 (390)
T cd06572 134 KDGKINPAILAAAKLAGVDE--IYKV-G-GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVS----GDVGIDMPAG 205 (390)
T ss_pred CCCCCCHHHHHHHHHcCCcE--Eecc-C-CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhc----CCcCccCCCC
Confidence 21111112222345666643 2222 3 444444443 368899998777665433221111 12222222 4
Q ss_pred CCceEE--cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCcccCcccCH
Q 010482 282 NAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 357 (509)
Q Consensus 282 ~~~~iV--~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~--~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~ 357 (509)
.+=++| ++.||.+.++..++.-+=... ..+.++|.. ++.++..+.+.+.++.+. ..
T Consensus 206 PSEvlIiAD~~A~p~~vAaDLLaQAEH~~-----~a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~ 265 (390)
T cd06572 206 PSEVLVIADETANPEFVAADLLSQAEHDP-----DSQAILVTTSEELAEAVEEEVERQLAELP---------------RR 265 (390)
T ss_pred CceEEEEeCCCCCHHHHHHHHHhhhccCC-----CCeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH
Confidence 444333 555899988877765543321 233455544 334444444444444331 00
Q ss_pred HHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCc
Q 010482 358 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 437 (509)
Q Consensus 358 ~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl 437 (509)
+ .++.+..+ + -.++.++|.+|+++++|..-- =
T Consensus 266 ---~----~~~~~~~~-------------------------------------~---g~ii~~~~~~eai~~~N~~AP-E 297 (390)
T cd06572 266 ---E----IAAKSLLD-------------------------------------Y---GAIILVDDLEEAIELANEYAP-E 297 (390)
T ss_pred ---H----HHHHHHHh-------------------------------------C---CEEEEECCHHHHHHHHHhhch-h
Confidence 0 11111110 1 145667999999999998532 2
Q ss_pred EEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 438 AAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 438 ~asv~t~d~~~~~~~~~~l~-~G~v~iN~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
..-|.++|... +..+++ +|.|++..++.. ++-+|.+ |+.|..+.-+...|++.-+
T Consensus 298 HLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s 362 (390)
T cd06572 298 HLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRIT 362 (390)
T ss_pred hheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCCC-----cceeecCCCCHHHheecce
Confidence 55677888754 666766 999999876541 2345554 4566666667888877543
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.37 Score=49.96 Aligned_cols=257 Identities=20% Similarity=0.209 Sum_probs=146.3
Q ss_pred CCceeEEEeecceEEEEEcCC-ChhHH-HHHHhhhhHhhCCCEEE--ecCCCCCHHHHHHHHHHHHHcCCCCccEEeecC
Q 010482 159 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 234 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~vV--lkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g 234 (509)
+|...-.++.|+--|++..|. .+|+. +.+....||-.+|..=| +-|+.........|+ +.+.+|+-+ +.-+ |
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~v-G 180 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE--IYVL-G 180 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe--ehhc-C
Confidence 455667789999999999995 33432 33345789999998544 455432112222333 346666653 2212 3
Q ss_pred Cchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCCCHHHHHHHHHHHHhhc
Q 010482 235 NAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFRN 307 (509)
Q Consensus 235 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~daDl~~a~~~i~~~~~~~ 307 (509)
|.+.-.+|. .-|.||+|+=.|..=+..+=.... ..+-..+- |.+=+.| +++||.+.++..++.-+=..
T Consensus 181 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 181 -GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLF----GRVGIDLFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc----CccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 344333333 357899998777765433221111 12333332 4444433 45589999888777655433
Q ss_pred cCCccccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC
Q 010482 308 SGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 385 (509)
Q Consensus 308 ~GQ~C~a~~rv~V~~--~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 385 (509)
.. .+.++|.. ++.++..+.+.+.+..+. + .+.++++.+.
T Consensus 256 ~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~------------ 296 (426)
T PRK12447 256 PN-----SPAVLITTSRKLAEEVLAEIERLLAILP----------------T------ADVASAAWRD------------ 296 (426)
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H------HHHHHHHHHh------------
Confidence 22 34455543 444454444444444331 1 1222222211
Q ss_pred CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 010482 386 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 464 (509)
Q Consensus 386 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~-~G~v~iN 464 (509)
+| .|+.++|.+||++++|..--= ...|.++|.. .+..+++ +|.|++.
T Consensus 297 -------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG 344 (426)
T PRK12447 297 -------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPD---WFLENMTNYGALFLG 344 (426)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccC
Confidence 11 345679999999999985332 4557788874 5677776 9999997
Q ss_pred CCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 465 EGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 465 ~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
.++.. ++-+|- +|+.|..+.-+.+.|++.-+
T Consensus 345 ~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s 384 (426)
T PRK12447 345 ERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVT 384 (426)
T ss_pred CCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhcccee
Confidence 65541 223443 45677777778888877543
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.49 Score=49.13 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=146.3
Q ss_pred CCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCEE--EecCCCCCHHHHHHHHHHHHHcCCCCccEEeec
Q 010482 159 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTV--VVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 233 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~v--Vlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~ 233 (509)
+|...-.++.|+--|++..|. -||...+ ....||-.+|..= ++-|+.........| -+.+.+|+-+ +.-+
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL-~AA~~~Gv~e--Iy~v- 184 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSSVL-MNAIPAKVAGVKEIVMVTPPPDGEINPAIL-AAAALAGVDE--VYKV- 184 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHHHH-HhhcchhhcCCCeEEEEeCCCCCCCCHHHH-HHHHHcCCCe--eecc-
Confidence 455666799999999999996 3554333 4578999999854 445553211222222 3446677653 2222
Q ss_pred CCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCCCHHHHHHHHHHHHhh
Q 010482 234 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFR 306 (509)
Q Consensus 234 g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~daDl~~a~~~i~~~~~~ 306 (509)
| |.+.-.+|. .-|.||+|+=.|..=+..+=....+ .+-..+- |.+=++| +++||.+.++..++.-+=.
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 259 (425)
T PRK00877 185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG----VVGIDMIAGPSEILVIADETADPDFVAADLLSQAEH 259 (425)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC----CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 3 444334443 3578999987777654322111111 2222222 4444433 4458999988887765544
Q ss_pred ccCCccccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Q 010482 307 NSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 384 (509)
Q Consensus 307 ~~GQ~C~a~~rv~V~~--~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 384 (509)
.. ..+.++|.. ++.++..+.+.+.+..+. + .+.++++.+.
T Consensus 260 d~-----~a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~ia~~sl~~----------- 301 (425)
T PRK00877 260 DP-----DAQSILVTTSEELAEAVAAEVERQLATLP----------------R------AEIARASLEG----------- 301 (425)
T ss_pred CC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHh-----------
Confidence 32 234455544 344444444444444331 0 1122222211
Q ss_pred CCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEE
Q 010482 385 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 463 (509)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~-~G~v~i 463 (509)
+| .|+.++|.|||++++|..-- =...|.++|+. .+..+++ +|.|++
T Consensus 302 --------------------------~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFl 348 (425)
T PRK00877 302 --------------------------QG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPR---ALLDRIRNAGAIFL 348 (425)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceecc
Confidence 12 34667999999999998532 24567888874 4667766 999999
Q ss_pred CCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 464 NEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 464 N~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
..++.. ++-+| .+|+.|..+.-+.+.|++.-+
T Consensus 349 G~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~F~K~~s 389 (425)
T PRK00877 349 GPYTPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKRSS 389 (425)
T ss_pred CCCCchhhhhcccCCCcccC-----CCcceeecCCccHHHhcccee
Confidence 765542 12344 456677777778888887543
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.48 Score=48.89 Aligned_cols=256 Identities=20% Similarity=0.218 Sum_probs=145.8
Q ss_pred CCceeEEEeecceEEEEEcCC-C--hhHHHHHHhhhhHhhCCCEEE--ecCCCCCHHHHHHHHHHHHHcCCCCccEEeec
Q 010482 159 PDRRLFVLKQPVGVAGAITPW-N--FPLAMITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVM 233 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~-n--~P~~~~~~~l~~ALaaGN~vV--lkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~ 233 (509)
++.....++.|+--|++..|. . ||...+ ....||-.+|..=| +-|+.........|+ +.+.+|+-+ +.-+
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~i- 174 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVL-MTATLAQVAGVENIVVVTPPQPNGVSQEVLA-ACYITQVNQ--VFQV- 174 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHH-HhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-HHHHcCCCe--eecc-
Confidence 355666789999999999995 3 444333 45789999998654 455433111222222 345666653 2222
Q ss_pred CCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCCCHHHHHHHHHHHHhh
Q 010482 234 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKFR 306 (509)
Q Consensus 234 g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~daDl~~a~~~i~~~~~~ 306 (509)
| |.+.-.+|. .-|.||+|+=.|..=+..+=....+ .+-..+- |.+=+.| +++||.+..+..++.-+=.
T Consensus 175 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 175 G-GAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG----QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 3 344333333 3578999987776654332111111 2323322 4444333 5568999988877765543
Q ss_pred ccCCccccCCeEEEe--hhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Q 010482 307 NSGQTCVCANRVLVQ--EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 384 (509)
Q Consensus 307 ~~GQ~C~a~~rv~V~--~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 384 (509)
.. ..+.++|. +++.++..+.+.+.+..+. + .+.++++.+.
T Consensus 250 d~-----~a~~iLvT~s~~la~~V~~ev~~ql~~lp----------------r------~~i~~~al~~----------- 291 (416)
T PRK13770 250 DE-----LARTYVISEDAQVLKDLESRIAKALPNVD----------------R------YDIVSKSIAN----------- 291 (416)
T ss_pred CC-----CCcEEEEeCCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHh-----------
Confidence 32 13445553 3444555555555544441 0 0122222211
Q ss_pred CCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEE
Q 010482 385 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 463 (509)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~-~G~v~i 463 (509)
+| .++.++|.|||++++|..-.= ..-|.++|.. .+..+++ +|.|++
T Consensus 292 --------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFl 338 (416)
T PRK13770 292 --------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFI 338 (416)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceecc
Confidence 11 345679999999999985332 4457788874 5677777 999999
Q ss_pred CCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 464 NEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 464 N~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
..++.. ++.+|- +|+.|..+.-+.+.|++.-+
T Consensus 339 G~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s 379 (416)
T PRK13770 339 GHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNT 379 (416)
T ss_pred CCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeeccee
Confidence 866542 233454 45666666677888887544
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.52 Score=48.35 Aligned_cols=282 Identities=20% Similarity=0.222 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCEEE--ecCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVV--VKPS 205 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~vV--lkps 205 (509)
-++.+.+.++.|....... .......+|...-.++.|+--|++..|. -||...+ ....||-.+|..=| +-|+
T Consensus 52 ai~~A~~~I~~fh~~q~~~--~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvL-M~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLPR--SWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVL-MTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHhCCC--CeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHH-HhhcchhhcCCCeEEEEeCC
Confidence 3445555565554433221 1111123466677899999999999996 3554333 45679999998544 4554
Q ss_pred CC-CHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC
Q 010482 206 EF-TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 280 (509)
Q Consensus 206 ~~-~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg 280 (509)
.. .......|+ +.+.+|+-+ +--+ | |.+.-.+|. .-|.||+|+=.|..=+..+=.... ..+-..+-
T Consensus 129 ~~~g~i~p~iL~-AA~~~Gv~e--Iy~v-G-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~----g~V~ID~~ 199 (393)
T TIGR00069 129 GKDGKINPAVLA-AAKLAGVDE--VYKV-G-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVF----GDVGIDMP 199 (393)
T ss_pred CcCCCCCHHHHH-HHHHcCCCe--ehhc-C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc----CccCcCCC
Confidence 32 112222233 446677653 2222 3 444333433 357899998777765433211111 12333332
Q ss_pred -CCCceEE--cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCcccCccc
Q 010482 281 -GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 355 (509)
Q Consensus 281 -G~~~~iV--~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~--~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i 355 (509)
|.+=++| +++||.+.++..++.-+=... ..+.++|.. ++.++..+.+.+.+..+.
T Consensus 200 AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~-----~a~~iLvT~s~~la~~V~~~v~~ql~~l~--------------- 259 (393)
T TIGR00069 200 AGPSEVLVIADETANPEFVAADLLSQAEHDP-----DAQAILVTTSEELAEAVQEEIERQLATLP--------------- 259 (393)
T ss_pred CCCceEEEEeCCCCCHHHHHHHHHHHhccCC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------
Confidence 4444444 556899998887776554332 234455533 444555555555544431
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 010482 356 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 435 (509)
Q Consensus 356 ~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~ 435 (509)
+ .+.++++.+. +| .++.++|.+||++++|..--
T Consensus 260 -r------~~i~~~al~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~AP 292 (393)
T TIGR00069 260 -R------REIARKSLED-------------------------------------NG---AIILVDDLEEAIEISNDYAP 292 (393)
T ss_pred -h------HHHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhCh
Confidence 0 1222222221 11 34567999999999998533
Q ss_pred CcEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 436 GLAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 436 gl~asv~t~d~~~~~~~~~~l~-~G~v~iN~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
= ...|.++|+. .+..+++ +|.|++..++.. ++.+|- +|+.|..+.-+.+.|++.-+
T Consensus 293 E-HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s 358 (393)
T TIGR00069 293 E-HLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRIT 358 (393)
T ss_pred H-hheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhcccee
Confidence 2 4457778874 4667766 999999876542 233444 45667766778888877543
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.73 Score=47.88 Aligned_cols=258 Identities=19% Similarity=0.233 Sum_probs=146.0
Q ss_pred CCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCEE--EecCCCCC-HHHHHHHHHHHHHcCCCCccEEee
Q 010482 159 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTV--VVKPSEFT-PLTALAAAELALQAGIPPGVVNVV 232 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~v--Vlkps~~~-p~~~~~l~~~l~~aGlP~gvv~~v 232 (509)
+|...-.++.|+.-|++..|. -||... +....||-.+|..= ++-|+... ......|+ +.+.+|+-+ +.-+
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTA-LMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH--ILKA 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHH-HHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe--eecc
Confidence 456667899999999999996 355433 34578999999854 44555321 12222333 446777653 2222
Q ss_pred cCCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCCCHHHHHHHHHHHHh
Q 010482 233 MGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDADLNVAVNGALAAKF 305 (509)
Q Consensus 233 ~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~daDl~~a~~~i~~~~~ 305 (509)
| |.+.-.+|. .-|.||+|+=.|..=+..+=....+. ..-+-..+- |.+=++| +++||.+.++..++.-+=
T Consensus 186 -G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~-~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAE 262 (431)
T PLN02926 186 -G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNS-EAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAE 262 (431)
T ss_pred -C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCC-CCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 3 444333443 35789999888876543321111111 000333332 4444444 445899988887776554
Q ss_pred hccCCccccCCeEEEehh--hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Q 010482 306 RNSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383 (509)
Q Consensus 306 ~~~GQ~C~a~~rv~V~~~--v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 383 (509)
.... .+.++|..+ +.++..+.+.+.++.+. + .+.++++...
T Consensus 263 Hdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~---------- 305 (431)
T PLN02926 263 HGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH---------- 305 (431)
T ss_pred cCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC----------
Confidence 3322 344555443 33444444444444331 0 1112222111
Q ss_pred cCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEE
Q 010482 384 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVG 462 (509)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~-~G~v~ 462 (509)
-.|+.++|.+||++++|..-- =...|+++|.. .+..+++ +|.|+
T Consensus 306 -------------------------------g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~~---~~l~~i~nAGaiF 350 (431)
T PLN02926 306 -------------------------------SFIVVARDMAEAISFSNLYAP-EHLIVNVEDAE---SWLDKIDNAGSVF 350 (431)
T ss_pred -------------------------------CEEEEECCHHHHHHHHHhhCh-HhheehhcCHH---HHHhhcCccceec
Confidence 145677999999999998532 24457788874 4667766 99999
Q ss_pred ECCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 463 VNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 463 iN~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
+..++.. ++-+|- +|.+|..|.-+.+.|++.-+
T Consensus 351 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s 392 (431)
T PLN02926 351 LGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMT 392 (431)
T ss_pred cCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceee
Confidence 9765441 233444 45667777778888887543
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.008 Score=70.87 Aligned_cols=101 Identities=15% Similarity=0.114 Sum_probs=75.7
Q ss_pred CceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhh
Q 010482 160 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDI 239 (509)
Q Consensus 160 ~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~ 239 (509)
|+.+.....|.|+|+++.+-.- .++.+++.+|++||.+|+..++.. . +++ ++||+.+.+.+.-.
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~--~~Lp~~v~~~v~~~---- 1241 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---R----ALV--AALPAAVQARIQLA---- 1241 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---H----HHH--HhccHHHHhHhhhc----
Confidence 6788899999999999988433 578899999999999988644332 1 122 56899888876321
Q ss_pred hhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEE
Q 010482 240 GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276 (509)
Q Consensus 240 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~ 276 (509)
.........++.|.|.|+.+..+.+.++.+++..+++
T Consensus 1242 ~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1242 KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1223344669999999999999999999988765443
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=1.4 Score=44.91 Aligned_cols=269 Identities=19% Similarity=0.110 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEE--ecCCCCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV--VKPSEFT 208 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vV--lkps~~~ 208 (509)
.+..+.+.++.|.......... . ..+|...-.++.|+--|++..|.-||- +++....||-.+|..=| +-|+..
T Consensus 58 ai~~a~~~I~~fh~~q~~~~~~-~--~~~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~- 132 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPPEAV-D--FYGGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG- 132 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCeE-e--cCCCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC-
Confidence 4455556666555433221111 1 235666778999999999999976664 34455789999998654 344421
Q ss_pred HHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCC-ceE
Q 010482 209 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNA-PCI 286 (509)
Q Consensus 209 p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~-~~i 286 (509)
.....|+ +.+.+|+-+ +.-+ | |.+.-.++...-.||+|+=.|..=+..+=....+ .+-..+- |.+ -+|
T Consensus 133 -i~p~vL~-aa~~~Gv~e--Iy~v-G-GAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlV 202 (368)
T PRK13769 133 -VTGELLA-VAKELGVKG--VLAI-G-GPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ----YVGIDGIEGPTELVV 202 (368)
T ss_pred -CCHHHHH-HHHHcCCCe--eecc-c-CHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhC----CcCCCCcCCCcceEE
Confidence 2222233 446677653 2222 3 4444445555558999988887654332221222 2323222 333 355
Q ss_pred EcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHH
Q 010482 287 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 287 V~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
+-+++|.+.++..++.-+=... ..+.++|..+ .++.+++.+++++.
T Consensus 203 iAD~a~p~~vAaDLLaQAEH~~-----~a~~iLvT~s--~~la~~V~~~v~~~--------------------------- 248 (368)
T PRK13769 203 YAEGVPPEVAVRGALAQLEHGP-----TSFAYLLSTD--AELLKAAEEIYRRE--------------------------- 248 (368)
T ss_pred EcCCCCHHHHHHHHHHHhhcCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------
Confidence 5556888887776665443321 2344555554 45555554443321
Q ss_pred HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Q 010482 367 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446 (509)
Q Consensus 367 i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~ 446 (509)
+.+ . . + . ..|+.++|.+||++++|..--= ...|.+.
T Consensus 249 ~~~-----~-------~---~-~-------------------------~~iivv~~leeai~~~N~~APE-HLel~~~-- 284 (368)
T PRK13769 249 RTS-----S-------M---G-P-------------------------LEVRKVAGVEEAVRFIDEIAPE-HLEVWGR-- 284 (368)
T ss_pred HHh-----c-------C---C-C-------------------------CeEEEECCHHHHHHHHHhhChH-heEeeCc--
Confidence 000 0 0 0 0 2567889999999999985322 2333442
Q ss_pred HHHHHHHhhcc-ceEEEECCCCCC-------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 447 QRTWRVSEALE-YGLVGVNEGLIS-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 447 ~~~~~~~~~l~-~G~v~iN~~~~~-------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
+.+..+++ +|.|+++++... ++-+|- +|.+|..|.-+...|++.-+
T Consensus 285 ---~~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~t 338 (368)
T PRK13769 285 ---REVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPT-----GGTARWRGIITPLTFMKPIG 338 (368)
T ss_pred ---HHHHhhCCccCChhcCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHccccee
Confidence 23556766 999999764331 233454 45666666677888876544
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.06 E-value=0.12 Score=54.02 Aligned_cols=111 Identities=18% Similarity=0.170 Sum_probs=82.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEE---EEEeCCHHHHHHHHhc
Q 010482 356 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAP---LLCFKTEEEAIHMAND 432 (509)
Q Consensus 356 ~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~---v~~~~~~~eai~l~n~ 432 (509)
+..++.++...+.+.++++...+...+.. +.|-++.++...++++..+.++ .|++..- ........+.+.+.+.
T Consensus 80 ~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~~ 156 (501)
T KOG2450|consen 80 DAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTRR 156 (501)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEecC
Confidence 56788888888888888888888877765 3567888888778887777665 4444442 3344556778888899
Q ss_pred CCCCcEEEEEcCC---HHHHHHHHhhccceEEEECCCCCC
Q 010482 433 TNAGLAAYIFTNN---LQRTWRVSEALEYGLVGVNEGLIS 469 (509)
Q Consensus 433 ~~~gl~asv~t~d---~~~~~~~~~~l~~G~v~iN~~~~~ 469 (509)
.+.|-...|---| .-.+.+++-.|.+|+++|+.+...
T Consensus 157 eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~ 196 (501)
T KOG2450|consen 157 EPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQ 196 (501)
T ss_pred CcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCC
Confidence 9999666665556 455778899999999999987653
|
|
| >PF12340 DUF3638: Protein of unknown function (DUF3638); InterPro: IPR022099 This domain family is found in eukaryotes, and is approximately 230 amino acids in length | Back alignment and domain information |
|---|
Probab=81.99 E-value=9.8 Score=36.35 Aligned_cols=89 Identities=21% Similarity=0.406 Sum_probs=62.4
Q ss_pred eEEeecC-CCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCC-----CCCC
Q 010482 274 KVSLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD-----GFGE 347 (509)
Q Consensus 274 ~~~lelg-G~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~-----p~~~ 347 (509)
-..+.+| ||+.+|+. ++.....++.+ .-|++|+++.+++-.+.|..++..+ +|. |++.
T Consensus 45 v~QlnMGeGKTsVI~P-----------mla~~LAdg~~----LvrviVpk~Ll~q~~~~L~~~lg~l-~~r~i~~lpFsR 108 (229)
T PF12340_consen 45 VMQLNMGEGKTSVIVP-----------MLALALADGSR----LVRVIVPKALLEQMRQMLRSRLGGL-LNRRIYHLPFSR 108 (229)
T ss_pred EeeecccCCccchHHH-----------HHHHHHcCCCc----EEEEEcCHHHHHHHHHHHHHHHHHH-hCCeeEEecccC
Confidence 3467777 99988762 22233344433 5589999999998888888888764 332 6666
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCc
Q 010482 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 382 (509)
Q Consensus 348 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~ 382 (509)
++. ++....+.+.+.++++...|+.+++-.+
T Consensus 109 ~~~----~~~~~~~~~~~l~~~~~~~~gill~~PE 139 (229)
T PF12340_consen 109 STP----LTPETLEKIRQLLEECMRSGGILLATPE 139 (229)
T ss_pred CCC----CCHHHHHHHHHHHHHHHHcCCEEEeChH
Confidence 665 4667888999999999988887776443
|
There are two conserved sequence motifs: LLE and NMG. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 509 | ||||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-161 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-161 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-154 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-151 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-145 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-144 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-100 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 3e-95 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 5e-94 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 5e-91 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-90 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 3e-90 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 8e-90 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 3e-88 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 2e-86 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 7e-86 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 9e-86 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 3e-85 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 7e-85 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 7e-85 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-85 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 2e-84 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 2e-84 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 3e-84 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-84 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 6e-84 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 6e-84 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 8e-84 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-83 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-83 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 2e-83 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 3e-83 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 3e-83 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 8e-83 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 2e-82 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-82 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 7e-82 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 8e-82 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 3e-81 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-80 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 4e-80 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 7e-80 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-79 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-79 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 6e-79 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-78 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-76 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-75 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-75 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 9e-74 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 5e-73 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-71 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-68 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 8e-68 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-67 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-65 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 6e-65 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 5e-64 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-63 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-63 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 6e-63 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-56 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 4e-56 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 8e-56 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-54 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-54 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-54 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 7e-53 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-50 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-50 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-50 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-48 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 7e-46 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 4e-44 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 8e-43 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 6e-42 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-40 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-38 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 4e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-31 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 9e-30 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 4e-26 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-25 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-25 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-25 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 2e-17 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 2e-17 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 2e-17 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 4e-17 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 7e-17 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 5e-16 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-08 |
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 509 | |||
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 0.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 0.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 0.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 0.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 0.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 0.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 0.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 0.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 0.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-162 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-150 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-141 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 1e-122 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-119 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-114 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-111 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-104 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 5e-89 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 6e-88 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 5e-79 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 898 bits (2323), Expect = 0.0
Identities = 271/473 (57%), Positives = 360/473 (76%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
F +Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A +W LT
Sbjct: 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALT 67
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AEE KR+YG
Sbjct: 68 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG 127
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP +
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
ALA AELA++AG+P GV NVV G+A +G+ L ++P VRK++FTGST +G++LM A
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+Y++FA+
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+A+ L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H G F+
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFF 367
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY + +L R +R
Sbjct: 368 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 427
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
V EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 428 VGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 896 bits (2318), Expect = 0.0
Identities = 269/473 (56%), Positives = 355/473 (75%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
Q IGG+W A T EV +PATGE + V MG ET AI +A A+ W T
Sbjct: 11 LRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKT 70
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LR+W+DL++A+ ++L ++T EQGKPL EA GE+ Y A FIE++AEE KRV G
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAG 130
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+ +P ++R+ V+K+P+GV AITPWNFP AMI RKVGPALA GC +VVKP+E TP +
Sbjct: 131 DTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFS 190
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
ALA A LA +AG+P GV++VV+G+ IG + ++P VRK++FTGSTAVG+ LMA +A T
Sbjct: 191 ALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPT 250
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
VKK++LELGGNAP IVFDDADL+ AV GA+A+K+RN+GQTCVC NR V E +Y+ FAD
Sbjct: 251 VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADK 310
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ AV LKVG G G GPLIN+AA++KVE+ + DA++KGA ++ GG+RH+LG F+
Sbjct: 311 LAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFF 370
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EPTVL+ VK +M V++EE FGP+APL F +EEE + +ANDT GLAAY+++ ++ R WR
Sbjct: 371 EPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWR 430
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
V+EALEYG+VG+N GLIS EVAPFGGVKQSGLGREGS YG+D+++ IKY+C+
Sbjct: 431 VAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 888 bits (2297), Expect = 0.0
Identities = 278/473 (58%), Positives = 354/473 (74%), Gaps = 2/473 (0%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
Q L+ G+WIDA DG T++V NPA G VI V + K+AI ++ A + W+ T
Sbjct: 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKT 90
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ER+ LRKW+DL++A+ +++ ++T EQGKPL EA GEV Y A FIE++AEEAKRVYG
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYG 150
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+ IPA +RL V++QPVGV AITPWNFP AMITRK PALA GCT++V+P++ TPLT
Sbjct: 151 DTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLT 210
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
ALA LA +AGIP GV+ +V G A +IG L ++ VRK++FTGST VG+ LMA A T
Sbjct: 211 ALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+K++SLELGGNAP IVFDDADL+ AV+GA+ +K+RN+GQTCVCANR+ VQ G+Y+KFA+
Sbjct: 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEK 330
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ VK LKVG+G GVV GP+I + A+ KV+ +EDAVSKGAK++ GG+ LG F+
Sbjct: 331 LAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFF 388
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
EP +L+ V S+MLV++EE FGP+APL F TEEE I ANDT GLAAY +T N R R
Sbjct: 389 EPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIR 448
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
VSEALEYG+VG N GLIS EVAPFGGVKQSGLGREGSKYG++E+LE KY+C
Sbjct: 449 VSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 886 bits (2292), Expect = 0.0
Identities = 211/477 (44%), Positives = 285/477 (59%), Gaps = 1/477 (0%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
+ G IGG+W D+ G T +V+NPATG VIA V M ++ A+ + A +
Sbjct: 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWP 69
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
R K L D L ++EE+G+++ +E GKP KEA GEVDY A F ++ A+ +
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
IP D V +PVGV G I PWNFP+ MI +K+ ALA GC V+KP+ TPLT
Sbjct: 130 HTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLT 189
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
+A + + +P G+VN+VMG A IG L V ++FTGST VG+KL+ A
Sbjct: 190 MIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
VKK++LELGGNAP IVFDDADL A + +A KFR GQTCVCANR+ V E + + F
Sbjct: 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQK 309
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TF 390
++ V + VGDG +G+ GPLINK +KV+ ++DA+ KGA ++ G + LG F
Sbjct: 310 LAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLF 369
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450
+ PTV+ V EM +EE FGP+ P+ F+TEEE I NDT GLA+Y+FT + +R
Sbjct: 370 FPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429
Query: 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
RV+ L +G VG N G T APFGG+K SG+GREG G+ EF+E + V G
Sbjct: 430 RVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAE 486
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 886 bits (2292), Expect = 0.0
Identities = 276/479 (57%), Positives = 359/479 (74%), Gaps = 6/479 (1%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
+GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W +++
Sbjct: 11 LRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVS 68
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYG 128
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP +
Sbjct: 129 DIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFS 188
Query: 212 ALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268
ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+ A
Sbjct: 189 ALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248
Query: 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
A +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI++ F
Sbjct: 249 ANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAF 308
Query: 329 ADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 387
AF++A+ KNL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH LG
Sbjct: 309 VKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLG 368
Query: 388 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447
F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++ +
Sbjct: 369 KNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPA 428
Query: 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
+ WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 429 QIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 487
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 881 bits (2280), Expect = 0.0
Identities = 177/480 (36%), Positives = 272/480 (56%), Gaps = 4/480 (0%)
Query: 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 91
++ IGG+++ + + T+++ +P+TG+VI + + ++A+ A A +W+KLT
Sbjct: 11 KNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLT 70
Query: 92 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 151
A R LR + + + +K L ++ EQGK L A EVD A FI++ + A + G
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEG 130
Query: 152 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
+I+P+ D ++++ K P GV IT WNFPLA+ RK+GPAL G T+V+KP++ TPL
Sbjct: 131 DILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLA 190
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
+A +AG+P GV+NV+ G +G L SP + IT TGST GK++ +A
Sbjct: 191 TTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY 250
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+ V LELGG AP +V DDADL+ A AL +F N GQ C C R+ V +Y++F
Sbjct: 251 MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAK 310
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----G 387
F VK LKVGD GP N+ ++ ++ V +A+ +GA V GG+ ++ G
Sbjct: 311 FLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEG 370
Query: 388 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447
+YEPTVL +VK + +V EE FGP+ P++ + E+AI ND+ GL+AY+ T +
Sbjct: 371 GCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFA 430
Query: 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507
+ LE G V +N G+ G KQSG G E K+G++++LE K V + +
Sbjct: 431 NINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEAE 490
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 870 bits (2250), Expect = 0.0
Identities = 185/471 (39%), Positives = 274/471 (58%), Gaps = 1/471 (0%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
I G+++ ++V NPAT VI+ + ++ + AI +A A W L A E
Sbjct: 8 PMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIE 67
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
R+ LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII
Sbjct: 68 RASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEII 127
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
+ P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP A+A
Sbjct: 128 QSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
A++ + G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA + K
Sbjct: 188 FAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITK 247
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
V LELGG AP IV DDADL +AV + ++ NSGQ C CA RV VQ+GIY++F + +
Sbjct: 248 VCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE 307
Query: 335 AVKNLKVGDGFGEG-VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 393
A++ ++ G+ + GPLIN AALE+VE V AV +GA+V GG+ +Y P
Sbjct: 308 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPP 367
Query: 394 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 453
T+L +V+ EM + EE FGPV P++ F T E+AI MAND++ GL + I+T NL +
Sbjct: 368 TLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAI 427
Query: 454 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
+ L++G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 428 KGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 824 bits (2130), Expect = 0.0
Identities = 165/487 (33%), Positives = 246/487 (50%), Gaps = 12/487 (2%)
Query: 24 SMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA 83
M T F+ L G+W+++ G+ + + PA+G + ++ + +E DAI A DA
Sbjct: 2 VMALQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA 61
Query: 84 FNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYA 143
W ER L W DLL KE +G+LI E KP K A+GEV A I A
Sbjct: 62 QKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTA 121
Query: 144 EEAKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 198
+EA R+ GE + + V ++P+GV AI+P+N+P+ + K+ PAL G
Sbjct: 122 DEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGN 181
Query: 199 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258
TVV KP+ L+ + E AG P G++ VV G IGD L+ P + ITFTG T
Sbjct: 182 TVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGT 241
Query: 259 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 318
G+++ A + V LELGG P IV DDADL + + ++ F SGQ C RV
Sbjct: 242 TTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRV 299
Query: 319 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378
VQ+ + ++ + V+ L VG + P+I++ + ++ ++DA+ GA +L
Sbjct: 300 FVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLL 358
Query: 379 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438
G +R PT+L +V M V+ EE FGPV P++ K EAI ++N ++ GL
Sbjct: 359 SGNKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQ 415
Query: 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLE 497
A IFT + R + + LE G V +N + PF GVK+SGLG +G K +
Sbjct: 416 ASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTR 475
Query: 498 IKYVCLG 504
+ L
Sbjct: 476 ERVTVLN 482
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 811 bits (2098), Expect = 0.0
Identities = 177/473 (37%), Positives = 262/473 (55%), Gaps = 17/473 (3%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I GKWI+ + ++V NP + EVI + + +E K+AI +A L +R
Sbjct: 3 FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
L + KEEL +++ ++ GKP+K+A EV+ + A K E+IP+
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS 119
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
DR +F ++PVG+ GAITP+NFPL + K+ PA+A G +V PS PL + A
Sbjct: 120 --DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELA 177
Query: 217 ELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
++ A +P GV N++ G +GD ++ + +V I+FTGS+ VG+ + A
Sbjct: 178 KIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--F 235
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
KK++LELGG P IV DADLN AVN + F +GQ C+ +LV E I +KF + F
Sbjct: 236 KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMF 295
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
K L VG+ E GPLI+ E VE VE A+ +G K+LLGG+R +
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK---ALFY 352
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PT+L V + ++ + E F PV P++ EEE I +AN T GL + IFTN++ ++ +
Sbjct: 353 PTIL-EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKF 410
Query: 453 SEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
+E LE+G V +N+ L + PFGGVK+SGLGREG KY M+E IK + +
Sbjct: 411 AENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 810 bits (2095), Expect = 0.0
Identities = 153/478 (32%), Positives = 265/478 (55%), Gaps = 6/478 (1%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
+ I GKW G+T ++ NP VI S GK+ +DA A A W+K T +
Sbjct: 8 KSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTED 67
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EI 153
R L+K L +++++ +I E G + ++ E++ ++ + G +
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKE 127
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
+P+ + + + + P+GV +I+P+NFP+ + R + PA+A G +VV KP T ++
Sbjct: 128 VPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187
Query: 214 AA-AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
A+ AG+P GV+NV++ + +IGD +LT+P R I+FTGSTAVG+ + A
Sbjct: 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAF 247
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K+++LELGGN P V DAD++ AV+ A+ KF + GQ C+ NR++V + +Y++F + F
Sbjct: 248 KRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKF 307
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+ VK L GD V GPLIN+ +EK +E A + G ++ + G+R
Sbjct: 308 TARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVG---NVLT 364
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
P V + +++ E+F P+A ++ +++EAI MANDT GL++ +FT++L++ +
Sbjct: 365 PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424
Query: 453 SEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 509
+ ++ G+ VN+ ++ FGG K SG+GR G+ + ++EF K++ + RK
Sbjct: 425 ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRK 482
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 808 bits (2089), Expect = 0.0
Identities = 156/476 (32%), Positives = 247/476 (51%), Gaps = 14/476 (2%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
+ + G+W + ++++ PA+G + +V M +E +SA A +W L+ E
Sbjct: 6 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
R+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE++
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 155 P-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269
++ L AE +AG+P GV N + G +IGD ++ V I FTGST +G+++ A
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243
Query: 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 329
++ + LELGG IV +DADL + +A F SGQ C RVLV E + ++
Sbjct: 244 --MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389
+ + V L +G+ + PLI+ + + VE + DA KGA L +R
Sbjct: 302 EKIREKVLALTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREG---N 357
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 450 WRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
+ ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 792 bits (2047), Expect = 0.0
Identities = 148/479 (30%), Positives = 241/479 (50%), Gaps = 16/479 (3%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAA 93
+ G+W + G+ +EV +P IA V +E + + F S +
Sbjct: 20 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGT 77
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 153
ER LRK D++ + + +++ + GKP AVGEV + + K++ G+
Sbjct: 78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDY 137
Query: 154 IPATLP----DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209
IP + V ++P+GV AITP+N+PL K+ + G VVVKPS P
Sbjct: 138 IPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDP 197
Query: 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269
L A A + L AG PP + ++ + ++ +V ++FTGST VG++++
Sbjct: 198 LPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256
Query: 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 329
VK+ +ELGG P IV +DADL++A + + +GQ C VL + +Y K
Sbjct: 257 --VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLV 314
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389
+ +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGRR LG T
Sbjct: 315 EEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPT 372
Query: 390 FYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 446
+ +PT + ++ +M++ + EVF PVA + K ++AI +AN GL A +F ++
Sbjct: 373 YVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 447 QRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504
+ R LE G + +N+ PFGG K+SG+ REG Y ++ K +
Sbjct: 433 VKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 491
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 784 bits (2026), Expect = 0.0
Identities = 163/485 (33%), Positives = 258/485 (53%), Gaps = 8/485 (1%)
Query: 24 SMQSYTPAFSRQG-LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 82
+ + LIGG+W++ + NP VIA + A +A
Sbjct: 2 VVTATFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKK 61
Query: 83 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFY 142
A W+ AAERS + + +LL H+EE+ + + E G +A E+ +
Sbjct: 62 AQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKES 121
Query: 143 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 202
A RV+G I P+ P + V + GV G I+PWNFPL + R V PALA G VV+
Sbjct: 122 ASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVI 181
Query: 203 KPSEFTPLTALA-AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 261
KP+ TP+T A + +AG+P GV++ V G +IGD +T + I+FTGST VG
Sbjct: 182 KPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241
Query: 262 KKLM--AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 319
+++ A G +K V+LELGGNAP +V DAD++ A A F + GQ C+ NRV+
Sbjct: 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVI 301
Query: 320 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 379
V ++++F + F +AVKN+ GD EG + GP+IN + L ++ +E A +GA V +
Sbjct: 302 VDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQV 361
Query: 380 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 439
G P V S+V S+M ++REE+FGP+ +L E A +AN ++ GL+A
Sbjct: 362 EGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSA 418
Query: 440 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEI 498
+++ ++ R + + ++ G+V +N+ ++ E FGG K SGLGR + ++EF
Sbjct: 419 AVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTD 478
Query: 499 KYVCL 503
+++ +
Sbjct: 479 RWIGI 483
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 745 bits (1926), Expect = 0.0
Identities = 139/475 (29%), Positives = 232/475 (48%), Gaps = 10/475 (2%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
+G+ G W G+ + + PA E IA V + ++ + A +A+ W+ + A +
Sbjct: 25 EGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPK 82
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
R + +R+ D L + LG L++LE GK L E VGEV ++ ++ + G I+
Sbjct: 83 RGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPIL 142
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P+ L PVG+ G IT +NFP+A+ A+ CG + K + T L ++A
Sbjct: 143 PSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202
Query: 215 AAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270
++ + +P + ++ G DIG A+ +V ++FTGST VGK++
Sbjct: 203 VTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE 261
Query: 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 330
+ LELGGN I F+DADL++ V AL A +GQ C A R+ + E I+++ +
Sbjct: 262 RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321
Query: 331 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 390
KA ++VG+ + V+ GPL K A+ VE+A +G V+ GG+ +
Sbjct: 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNY 381
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR-- 448
EPT+++ + + ++ E F P+ + F+ EEE N+ GL++ IFT +L R
Sbjct: 382 VEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIF 441
Query: 449 TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
W + + G+V VN E+ FGG K +G GRE +++
Sbjct: 442 RWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 733 bits (1896), Expect = 0.0
Identities = 141/473 (29%), Positives = 223/473 (47%), Gaps = 8/473 (1%)
Query: 29 TPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 88
+ A I G+W+ G+TLE +P V+ + + A+ +A +AF +W+
Sbjct: 1 SNAMMSTHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWA 59
Query: 89 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 148
+ +R + L ++ L + +EL ++I E GKPL E+ EV + + +
Sbjct: 60 RRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRE 119
Query: 149 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 208
GE L D + +P GV P+NFP + + PAL G VV KPSE T
Sbjct: 120 RTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELT 178
Query: 209 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268
P A + +QAG+P GV+N+V G + G AL + + FTGS+ G L +
Sbjct: 179 PKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQF 237
Query: 269 AG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-E 326
G K ++LE+GGN P +V + ADL+ AV + + F ++GQ C CA R+LV +G + +
Sbjct: 238 GGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD 297
Query: 327 KFADAFSKAVKNLKVGDGFGEGVVQ-GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 385
L+VG + G +I+ +A E + E + KGA+ LL +
Sbjct: 298 ALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI 357
Query: 386 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445
G P +L +V + EE FGP+ ++ + AI AN T GLAA + +++
Sbjct: 358 DGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDS 416
Query: 446 LQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLE 497
+R + G+V N+ L + APFGG+ SG R + Y D
Sbjct: 417 RERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAY 469
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 705 bits (1822), Expect = 0.0
Identities = 162/459 (35%), Positives = 245/459 (53%), Gaps = 2/459 (0%)
Query: 48 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM 107
NPATG+ +A + +E + A+S A F W + A+R++ LR L
Sbjct: 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALR 65
Query: 108 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK 167
AH EE+ Q IT E GKP+K+A EV A ++YAE + P + +++ +
Sbjct: 66 AHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEY 124
Query: 168 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 227
+P+GV AI PWNFPL + R P L G + ++K + A A + +AG P G
Sbjct: 125 RPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAG 184
Query: 228 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 287
V V N + ++ P++ +T TGS G + A A +KK LELGG+ P IV
Sbjct: 185 VYGWVNANNEGVSQ-MINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 347
+DADL +AV A+A +++N+GQ C A R +V+EGI + F D F A LK+GD E
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVE 303
Query: 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 407
GP+ +++ V+ +V++GA++LLGG + + +Y TVL++V +M R
Sbjct: 304 ENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFR 363
Query: 408 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 467
+E+FGPVA + K A+ +AND+ GL+A IFT + ++ LE G V +N
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYS 423
Query: 468 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506
S FGGVK+SG GRE S +G+ EF ++ V +
Sbjct: 424 ASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 698 bits (1804), Expect = 0.0
Identities = 137/460 (29%), Positives = 226/460 (49%), Gaps = 2/460 (0%)
Query: 50 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 109
+ NP T E A+ K+ +AI+ A + W A R++ L + L H
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEH 64
Query: 110 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQP 169
++EL +++TLE GK L E+ EV+ +YA+ + + + LKQ
Sbjct: 65 EDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQS 123
Query: 170 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVV 229
GV A PWNFPL + R P G +++K + P +A A++ +AG P G +
Sbjct: 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL 183
Query: 230 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289
+ + + D ++ P+++ + TGS G + A +KK ++ELGGN IV D
Sbjct: 184 INLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242
Query: 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349
DAD V N A+ N GQ C + R++V++ Y++ NLK GD
Sbjct: 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADT 302
Query: 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 409
P+ ++ A EK+E V++A+ GAKV F+ PT+L+++ + V +E
Sbjct: 303 TLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKE 362
Query: 410 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 469
VFGP+A + + + AI +AND++ GL + + +++ R +VS +E G+ +N I+
Sbjct: 363 VFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWIT 422
Query: 470 TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 509
+ PFGG+K+SG GRE S G+ F+ V N +
Sbjct: 423 SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQ 462
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 601 bits (1552), Expect = 0.0
Identities = 184/485 (37%), Positives = 289/485 (59%), Gaps = 6/485 (1%)
Query: 23 PSMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 82
+ S++ I G+W+++ + T ++ NP EVI VS ++ + AI +A
Sbjct: 22 SNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARR 81
Query: 83 AFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIE 140
AF S WS+ TA R K +R D + H+E L +L TL+ GK L+E+ ++D
Sbjct: 82 AFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFM 141
Query: 141 FYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 200
++A A + GE+I + +PD ++K+PVGV ITPWN+PL + K+ PALA GC++
Sbjct: 142 YFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSL 201
Query: 201 VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 260
V+KPSE TPLT + EL + G P G +N+++G ++GD + +V ++FTG
Sbjct: 202 VMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIET 261
Query: 261 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 320
GK +M AA V ++LELGG P I+FDDAD +AV+ AL + ++GQ C +R+LV
Sbjct: 262 GKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILV 321
Query: 321 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 380
Q I +KF A VK +K+G+GF GP+I+ K+E++++ A ++GA + +G
Sbjct: 322 QNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVG 381
Query: 381 GRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 436
G+R F+EPTV++N + M + +EEVFGPV + F+TE+EAI +AND+ G
Sbjct: 382 GKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYG 441
Query: 437 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 496
LA +F+ ++ + RV+ L+ G V +N+ AP+GG KQSG+GRE K G++E+L
Sbjct: 442 LAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYL 501
Query: 497 EIKYV 501
K++
Sbjct: 502 VSKHI 506
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 598 bits (1544), Expect = 0.0
Identities = 190/470 (40%), Positives = 276/470 (58%), Gaps = 4/470 (0%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAA 93
L+ GK +DA G T++ +P GEV+ + + A+++A AF++ W +++ A
Sbjct: 26 LVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGA 85
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 153
ERS+ + K DL++A +EEL + +LE GKP+ +A GE+ + A + A +A+ + G+
Sbjct: 86 ERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQT 145
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
DR VL++PVGV G ITPWNFP + + +V A+ GCTVV+KPSEFT T++
Sbjct: 146 HNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSI 205
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273
AELA +AGIP GV NVV G G L P V + FTGS VG KL AA TVK
Sbjct: 206 RLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVK 265
Query: 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 333
+V LELGG P IVF DADL+ A +G + N+GQ C+ +R+LVQEGI + +
Sbjct: 266 RVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLL 325
Query: 334 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYE 392
+ + GD E G +I++A EKV ++V ++ GA++LLGG R +Y
Sbjct: 326 DISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYA 385
Query: 393 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 452
PTV + V +M ++REE+FGPV L FKT +EA+ +AN T GL+A +++ NL+ +
Sbjct: 386 PTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQT 445
Query: 453 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
+ G +N + T P GG K+SGLGRE +YG DE+ + K V
Sbjct: 446 IRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVH 495
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 592 bits (1528), Expect = 0.0
Identities = 193/480 (40%), Positives = 283/480 (58%), Gaps = 10/480 (2%)
Query: 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SW 87
+RQ I G W K + V NPAT +I ++ ++ A+++A A W
Sbjct: 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADW 66
Query: 88 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 147
+ + A R++ LR + K EL +L +++ GKPL EA ++D A E+YA+ A+
Sbjct: 67 ATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAE 126
Query: 148 RVYGE-IIPATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 204
++ P +LP VL++P+GV G ITPWN+P+ M T KV PALA GC ++KP
Sbjct: 127 KLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKP 186
Query: 205 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 264
SE LT L E+ + G+PPGV+N++ G P+ G L T P V K+ FTGS+A G K+
Sbjct: 187 SELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKI 246
Query: 265 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 324
M AA VK VSLELGG +P +VF+D DL+ A A+ F +GQ C +R+++ E I
Sbjct: 247 MTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306
Query: 325 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 384
+F + K +KN+K+ D EG GP++++ EK+ FV +A S+GA +L GG R
Sbjct: 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRP 366
Query: 385 SLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 442
F EPT++++V + M + REEVFGPV + F TEEEAI +ANDT GL A +
Sbjct: 367 EHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVI 426
Query: 443 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
+N+L+R RV++A + G+V VN AP+GGVK+SG GRE ++G+D +L +K V
Sbjct: 427 SNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 587 bits (1517), Expect = 0.0
Identities = 187/499 (37%), Positives = 267/499 (53%), Gaps = 12/499 (2%)
Query: 19 ASHLPSMQSYTPAFSRQGL-IGGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDA 76
+PS + + + GG+ I + DG T E V PATG V+ + G +E A
Sbjct: 4 VDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQA 63
Query: 77 ISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGA 136
+ SA A+ WSK+ ERS+ + + ++ ++ + +L + GK + EA ++D
Sbjct: 64 VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAW 123
Query: 137 KFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 196
+ IE+YA A + G+ I + ++P+GV I WN+P + K PALAC
Sbjct: 124 QCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALAC 182
Query: 197 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 256
G VV KPS TP+T + AE+ +AG+P G+VNVV G + G L P V K++FTG
Sbjct: 183 GNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTG 241
Query: 257 STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 316
S GKK+M +A TVK V+LELGG +P ++F D +L AV GAL A F GQ C
Sbjct: 242 SVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGT 301
Query: 317 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 376
RV VQ I +F + K K + VGD G LI+K L+KV FV A +GA+
Sbjct: 302 RVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGAR 361
Query: 377 VLLGGRRHSLGMT------FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430
VL GG + F P VL N + +M +EE+FGPV +L F TEEE + A
Sbjct: 362 VLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRA 421
Query: 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 490
N+T GLA+ +FT ++ R RV+ LE G +N IS PFGG K SG GRE +
Sbjct: 422 NNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQA 481
Query: 491 GMDEFLEIKYVC--LGDMN 507
+D + ++K V +GD++
Sbjct: 482 TVDYYSQLKTVIVEMGDVD 500
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 583 bits (1506), Expect = 0.0
Identities = 176/487 (36%), Positives = 264/487 (54%), Gaps = 6/487 (1%)
Query: 20 SHLPSMQSYTPAFSRQG--LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAI 77
HL S Y A Q LI G+ + +G+ V+NPATG+V+ ++ ++ A+
Sbjct: 8 HHLESTSLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAV 66
Query: 78 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGA 136
+A AF W + T R++ L K D++ + + +L + GKPL A E+
Sbjct: 67 RAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 126
Query: 137 KFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 196
F+A A+ + G L + + P+GV +I PWN+PL M K+ PALA
Sbjct: 127 DVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAA 186
Query: 197 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 256
G VV+KPSE TPLTAL AELA P GVVN++ G +GD L P+VR ++ TG
Sbjct: 187 GNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTG 245
Query: 257 STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 316
S A G+ +++ A ++K+ +ELGG AP IVFDDAD+ V G + N+GQ C A
Sbjct: 246 SIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAAC 305
Query: 317 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-A 375
R+ Q+GIY+ + AV LK G E GPL + A LE+V VE+A + G
Sbjct: 306 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHI 365
Query: 376 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 435
KV+ GG + +Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQY 425
Query: 436 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEF 495
GLA+ ++T ++ R RVS L+YG VN + P GG K SG G++ S YG++++
Sbjct: 426 GLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 485
Query: 496 LEIKYVC 502
+++V
Sbjct: 486 TVVRHVM 492
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 581 bits (1501), Expect = 0.0
Identities = 167/487 (34%), Positives = 256/487 (52%), Gaps = 5/487 (1%)
Query: 19 ASHLPSMQSYTPAFSRQGL-IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAI 77
L + Y + L IG ++ + NP TG I +++ + A+
Sbjct: 10 GVDLGTENLYFQSMMDTQLLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQIDAAV 68
Query: 78 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGA 136
+A AF WS+ T AERS L K D + +E L L GKP+ E+
Sbjct: 69 DAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128
Query: 137 KFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 196
F+A + ++ LP + + P+G+ G+I PWN+PL M+ K+ PA+
Sbjct: 129 DCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGG 188
Query: 197 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 256
G TVV KPSE TPLTAL A L +P GVVNV+ G +G+AL+ P+V ++ TG
Sbjct: 189 GNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITG 247
Query: 257 STAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 316
A GKK++A AA TVK+ LELGG AP IV+ DADL VNG + N+GQ C A
Sbjct: 248 DIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAAC 307
Query: 317 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-A 375
R+ + GIYEK + AV ++ GPLI++ ++V +FVE A +
Sbjct: 308 RIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHI 367
Query: 376 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 435
++ GGR S F++PTV++ E + R EVFGPV + F +++A+ AND++
Sbjct: 368 EITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDY 427
Query: 436 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEF 495
GLA+ ++T ++ + R + L+YG +N + T P GG+KQSG G++ S Y ++++
Sbjct: 428 GLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDY 487
Query: 496 LEIKYVC 502
++++
Sbjct: 488 TAVRHIM 494
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 578 bits (1493), Expect = 0.0
Identities = 174/478 (36%), Positives = 262/478 (54%), Gaps = 10/478 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I G +++ G E PATGE+IA + + AI+SA A W+ ++ R
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG 77
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAK-RVYGEII 154
+ L++ D++ + L L TL+ GKP++E V + GA EF+ A + G+ I
Sbjct: 78 RILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYI 137
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P L + + P+GV I WN+P + K PAL G +V KPSE TPL AL
Sbjct: 138 P--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALK 195
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274
AE+ ++AG+P G+ NV+ G+ G L+ P V K++ TGS G+K+ A AAG +K
Sbjct: 196 IAEILIEAGLPKGLFNVIQGDRD-TGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKH 254
Query: 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 334
V++ELGG +P IVFDDAD+ AV GA+ F +SGQ C RV VQ+ +F + +
Sbjct: 255 VTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKR 314
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FY 391
+ + +GD GPL++KA EKV +++E ++GA ++ GG + +
Sbjct: 315 RTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYV 374
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PTV ++V +M ++REE+FGPV +L F E+E + AN T GLA +FT +L R R
Sbjct: 375 QPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHR 434
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDMN 507
V + LE G + +N + PFGG KQSG GRE S ++ + E+K V G ++
Sbjct: 435 VVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVD 492
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 577 bits (1491), Expect = 0.0
Identities = 189/472 (40%), Positives = 265/472 (56%), Gaps = 6/472 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS---WSKLTAA 93
I +W + GK V NPAT E + V ++ A+ +A AF W + A+
Sbjct: 24 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 83
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGE 152
ER + L K DL+ + L + + GK A + ++ K + + A A ++ G
Sbjct: 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 143
Query: 153 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212
IP + + +PVGV G I PWNFPL M K+GPAL+CG TVVVKP+E TPLTA
Sbjct: 144 TIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 202
Query: 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GT 271
L L +AG PPGVVN+V G P G A+ + V K+ FTGST VGK + A
Sbjct: 203 LHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSN 262
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+K+VSLELGG +PCIVF DADL+ AV A F + GQ C+ A+R+ V+E IY++F
Sbjct: 263 LKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRR 322
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ K +G+ GV QGP I+K EK+ +E +GAK+ GG F
Sbjct: 323 SVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFI 382
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PTV S+V +M +++EE+FGPV ++ FK+ ++ I AN+T GL+A IFTN++ +
Sbjct: 383 QPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAIT 442
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
VS AL+ G V VN + + PFGG K SG GRE +YG E+ E+K V +
Sbjct: 443 VSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 576 bits (1488), Expect = 0.0
Identities = 171/483 (35%), Positives = 256/483 (53%), Gaps = 17/483 (3%)
Query: 24 SMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE-TKDAISSAFD 82
+M+ YT + I G+W+++ +T+EV NPAT EVI V+ G K A+ +A D
Sbjct: 3 AMRDYTKQY-----INGEWVESNSNETIEVINPATEEVIGKVA-KGNKADVDKAVEAADD 56
Query: 83 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEF 141
+ + + ER L K K+++ Q IT E G PL + G
Sbjct: 57 VYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVA 116
Query: 142 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 201
+ E V+K+ +GV+G ITPWNFP + K+ A A G VV
Sbjct: 117 ARDALDNYEFEERRGDD-----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVV 171
Query: 202 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 261
+KPSE TP A+ AE+ + G+P GV N+V G+ +G+ L P+VR ++FTGS G
Sbjct: 172 LKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTG 231
Query: 262 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 321
K+M AA KKVSLELGG +P IV DD D+ A N+GQ C RVLV
Sbjct: 232 SKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVP 291
Query: 322 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 381
I + F + ++VG+ +G GP+I+K ++V+ ++ + +GA++ GG
Sbjct: 292 NKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGG 351
Query: 382 RRHSLGMT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 438
G+ F PT+ NV ++M +++EE+FGPV ++ + +EAI +ANDT GLA
Sbjct: 352 PGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLA 411
Query: 439 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 498
Y+ + + +V+ ++E G V +NE + PFGG KQSGLGRE YG++EFLE+
Sbjct: 412 GYVIGKDKETLHKVARSIEAGTVEINEAGRKPD-LPFGGYKQSGLGREWGDYGIEEFLEV 470
Query: 499 KYV 501
K +
Sbjct: 471 KSI 473
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 577 bits (1491), Expect = 0.0
Identities = 178/504 (35%), Positives = 275/504 (54%), Gaps = 16/504 (3%)
Query: 13 GSRRIFASHLPSMQSYTPAFSRQG---LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMG 69
+ R+ +++ + I G+++ + G+T +PAT EV+ + G
Sbjct: 3 YADRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAA-RG 61
Query: 70 GKETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 128
G+ D A +A +AF WS+ A ER + L + +L+ H +EL + L+ G+ L+
Sbjct: 62 GEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIV 121
Query: 129 VGEVDYGAKFIEFYAEEA-KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 187
+V A+ FYAE A + P D + ++ P G G ITPWN PL + T
Sbjct: 122 RAQVARAAENFAFYAEYAEHAMEDRTFPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLST 180
Query: 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 247
++ PALA G TVV+KP+E++P TA AE+ +A +PPGV N+V G + G AL+ P
Sbjct: 181 WRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHP 240
Query: 248 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 307
V +T TG T GK +M AA +K++S ELGG +P +VF DADL A++ + F
Sbjct: 241 LVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF 300
Query: 308 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367
+G+ C ++R+LV+E I+E F + + ++VG GPLI+ L++V +V
Sbjct: 301 NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYV 360
Query: 368 EDAVSKGAKVLLGGRRHSLGMT--------FYEPTVLSNVKSEMLVSREEVFGPVAPLLC 419
E +GA++L+GG R + PTV ++ M +++EE+FGPV +
Sbjct: 361 EAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIP 419
Query: 420 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVK 479
FK EEEA+ ANDT GLAAY+FT +L+R R++ LE G+V +N + PFGGVK
Sbjct: 420 FKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVK 479
Query: 480 QSGLGREGSKYGMDEFLEIKYVCL 503
SG REG Y +D + ++K + L
Sbjct: 480 GSGDRREGGTYALDFYTDLKTIAL 503
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 573 bits (1480), Expect = 0.0
Identities = 187/487 (38%), Positives = 274/487 (56%), Gaps = 6/487 (1%)
Query: 22 LPSMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAF 81
+P+ F Q I +W DA KT NP+TGEVI V+ ++ A+ +A
Sbjct: 8 VPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAAR 67
Query: 82 DAFNS---WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAK 137
AF W ++ A+ R + L + DL+ + L L TL+ GKP + + ++D K
Sbjct: 68 AAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLK 127
Query: 138 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 197
+ +YA A + +G+ IP D + +PVGV G I PWNFPL M K+GPALA G
Sbjct: 128 CLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATG 186
Query: 198 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 257
VV+K +E TPLTAL A L +AG PPGVVN+V G P G A+ + V K+ FTGS
Sbjct: 187 NVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGS 246
Query: 258 TAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 316
T +G+ + A + +K+V+LELGG +P I+ DAD++ AV A A F N GQ +
Sbjct: 247 TEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS 306
Query: 317 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 376
R VQE IY++F + K+ VG+ F QGP +++ +K+ ++ +GAK
Sbjct: 307 RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAK 366
Query: 377 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 436
+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ G
Sbjct: 367 LLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYG 426
Query: 437 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 496
LAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE +YG+ +
Sbjct: 427 LAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYT 486
Query: 497 EIKYVCL 503
E+K V +
Sbjct: 487 EVKTVTV 493
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 570 bits (1471), Expect = 0.0
Identities = 167/495 (33%), Positives = 261/495 (52%), Gaps = 17/495 (3%)
Query: 20 SHLPSMQSYTPAFSRQG--------LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGK 71
H M + G I G W D L V +P+T E A +S +G
Sbjct: 4 HHHHHMGTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVIS-LGST 62
Query: 72 ETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-V 129
D AI++A AF +W + ER + K ++ ++ + I++E G P+ A
Sbjct: 63 RDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALN 122
Query: 130 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189
+ G+ I + + K + + + + +GV G ITPWN+P+ +T K
Sbjct: 123 AQTATGSSHIRNFIKAYKEFSFQEALIE-GNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181
Query: 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 249
V PAL GCT+V+KPSE PL+A+ AE+ +A +P GV N++ G+ ++G L P +
Sbjct: 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDL 241
Query: 250 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 309
I+FTGST GK + A+ T+K+V LELGG I+F DAD++ A+ + F NSG
Sbjct: 242 EMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSG 300
Query: 310 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369
Q+C R+LV++ IY+K + +VG G G GP+++K +K++ ++
Sbjct: 301 QSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQS 360
Query: 370 AVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426
+ +GA ++ GG +GM + PTV ++VK M + REE+FGPV LL F TE+EA
Sbjct: 361 GIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEA 420
Query: 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 486
+ +ANDT GL YI + + + R++ + G+V VN + + FGGVK SG RE
Sbjct: 421 VTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGG-SYFGGVKFSGRARE 479
Query: 487 GSKYGMDEFLEIKYV 501
G +G+ EFL+ K +
Sbjct: 480 GGLWGIKEFLDTKAI 494
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 570 bits (1472), Expect = 0.0
Identities = 176/476 (36%), Positives = 264/476 (55%), Gaps = 9/476 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAE 94
IGG+++DA KT NP G VI VS + A+++A +AF W K+ A +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEI 153
R + L + D++ H+EEL + L+ G A V + ++A ++ G
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 154 IPATLPDRRL---FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 210
IP K+PVGV G + PWN+PL M++ K LA G TVV+KP++ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 269
TAL AEL L+AGIP GVVN++ G+ +G L P VRKI FTGST VGK +M A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 329
VKKVSLELGG +P I+F D DLN AV +++ F N G+ C+ A R+ V+E I+ +F
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389
+ V+ +K+G+ GP ++A L K+ + + V +GA ++ GG +
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQ 447
F++PTV ++V+ M +++EE FGP+ + F + + AN T GLA+ +FT ++
Sbjct: 400 FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459
Query: 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
+ VS+ L+ G V +N + APFGG KQSG G++ + ++E+L IK V
Sbjct: 460 KALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 564 bits (1455), Expect = 0.0
Identities = 160/473 (33%), Positives = 253/473 (53%), Gaps = 10/473 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNS--WSKLTAA 93
IGGKW +EV PATGE + V M D A+++A AF++ W
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVP-MAAAADVDAAVAAARAAFDNGPWPSTPPH 70
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGE 152
ER+ + +L K+ +L+ E G+P + ++A A +V
Sbjct: 71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT 130
Query: 153 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212
+ + V ++PVGV GAI WN PL + K+ PAL GCT+V+KP+ TPLTA
Sbjct: 131 ETRTGSYGQSI-VSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA 189
Query: 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
A AE+ + G+P GV++VV G + G AL ++P + TFTGS+AVG+++ AA +
Sbjct: 190 NALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEML 248
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K +LELGG + I+ +D DL A+ + + N+GQ CV R+L Y++ A
Sbjct: 249 KPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAV 308
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--F 390
+ V L VG GPLI++ +VE ++ + +GA+++ GG R F
Sbjct: 309 TNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFF 368
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450
+PTV ++V ++M +++EE+FGPV ++ + TEE+AI +AND+ GLA ++T ++ +
Sbjct: 369 IQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGI 428
Query: 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
++S+ + G G+N +PFGG K SG+GRE G++ F + K V L
Sbjct: 429 KISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 551 bits (1423), Expect = 0.0
Identities = 142/475 (29%), Positives = 231/475 (48%), Gaps = 13/475 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
+I G+ + ++ NPA +++ +VS + AI SA +AF +W + ER
Sbjct: 41 IINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEER 98
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
+ L K ++ K E + E GKP KEA + F+E+YA + +
Sbjct: 99 ANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEI 158
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
+ P + P+GV I+PWNF LA++ + G TVV+KP+ TP+ A
Sbjct: 159 LSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKF 218
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA------ 269
E+ AG+P GV+N V G+ ++GD L+ P+ ITFTGS VG +L AA
Sbjct: 219 VEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQ 278
Query: 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 329
+K+V +E+GG +V DADL++A L + F SGQ C +R ++ + +Y++
Sbjct: 279 NHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVL 338
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389
+ KNL VGD GP+I++ A EK+ +++E +G +++ GG S
Sbjct: 339 EKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGF 397
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
F +PT+++++ E ++ +EE+FGPV + A+ +AN+T GL + T N
Sbjct: 398 FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHI 457
Query: 450 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGSKYGMDEFLEIKYV 501
+ G + N V PFGG K SG + G + ++ K V
Sbjct: 458 EQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 147/477 (30%), Positives = 230/477 (48%), Gaps = 15/477 (3%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
IGG+W+D + + NP+ EV+ + G E + A+ +A+ AF +W +R
Sbjct: 41 YIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDR 98
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
S+ L K L+ K EL + E GK EA +V FIE+YA A R +
Sbjct: 99 SRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVE 158
Query: 156 AT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P P+G I PWNFP+A+ T + +A G TV+ KP+E +
Sbjct: 159 VVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA----- 269
E+ +AG PPGVVN + G ++G L+ P++R I FTGS VG K+ A
Sbjct: 219 VFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPG 278
Query: 270 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
K+ +E GG IV + AD ++A G + + + GQ C A+R+++ +G YE
Sbjct: 279 QTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPV 338
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
+ K + L VG E GP+++ KV +++E ++G +++LGG+R
Sbjct: 339 LERVLKRAERLSVGP-AEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEG 396
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448
F PTV + V + +++EE+FGPV ++ K EA+ +ANDT GL +++ +
Sbjct: 397 YFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456
Query: 449 TWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 502
G + N + V PFGG K SG + G+ + FLE+K V
Sbjct: 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 526 bits (1356), Expect = 0.0
Identities = 104/512 (20%), Positives = 185/512 (36%), Gaps = 48/512 (9%)
Query: 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 94
+ + G+WI G + + +P TG + VS G + + D + LT A+
Sbjct: 9 KNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQ 67
Query: 95 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 154
R+ L LL A + + + T G ++ ++D G + +YA+ +
Sbjct: 68 RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHA 127
Query: 155 PATLPDRRL---------FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 205
L VL GVA I +NFP + K PAL G V+VKP+
Sbjct: 128 LRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187
Query: 206 EFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 264
T + AGI PPG ++++ G++ L ++FTGS L
Sbjct: 188 TATAWLTQRMVADVVDAGILPPGALSIICGSS---AGLLDQIRSFDVVSFTGSADTAATL 244
Query: 265 MAGAAGTVK--KVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANR 317
A A + +++++ I+ DA ++ + + SGQ C R
Sbjct: 245 RAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRR 304
Query: 318 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 377
V E E +A + + VG+ + V G L+++ E V + +
Sbjct: 305 AFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLA 364
Query: 378 LLGGRRHSLGMT-----FYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKT-------- 422
+ P + ++ + L+ EVFGPVA + ++
Sbjct: 365 YDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424
Query: 423 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-----------EGLISTE 471
E A+ +A L A I++N+ R++ L V+
Sbjct: 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMP 484
Query: 472 VAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 502
++ GG ++G G E G + + +
Sbjct: 485 MSLHGGPGRAGGGEELGGLRALAFYHRRSAIQ 516
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 470 bits (1211), Expect = e-162
Identities = 119/510 (23%), Positives = 184/510 (36%), Gaps = 45/510 (8%)
Query: 19 ASHLPSMQSYTPAFSRQGLIGGKWIDAYD-GKTLEVHNPATGEVIANVSCMGGKETKDAI 77
+L + L+ G+W+D + H PA + V A
Sbjct: 15 TENLYFQSMMIFTPKGKHLVAGEWLDGAGTFASAPAHGPAHDFAVGTVE-----LVNRAC 69
Query: 78 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK 137
+A +AF ++ + ER+ LR D + A E + ++ + E G P GE
Sbjct: 70 EAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTG 129
Query: 138 FIEFYAEEAK------RVYGEIIPATLPDRR--LFVLKQPVGVAGAITPWNFPLAMIT-- 187
+ +A+ + R +P P R + ++++PVG NFPLA T
Sbjct: 130 QLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAG 189
Query: 188 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDAL 243
ALA GC VVVK P T AE A G+ PGV +++ G + D+G AL
Sbjct: 190 GDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHAL 249
Query: 244 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV--SLELGGNAPCIVFDDADLNVA---VN 298
+ P ++ + FTGS A G+ L A + + ELG P + +A A
Sbjct: 250 VQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQ 309
Query: 299 GALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 357
G + +GQ C +V EG ++F A +A+ + +G+ + +
Sbjct: 310 GWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQ 369
Query: 358 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 417
A A K LL + EEVFGP+ +
Sbjct: 370 ARF---------ATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLV 420
Query: 418 LCFKTEEEAIHMANDTNAGLAAYIFT--NNLQRTWRVSEALEY--GLVGVNEGLISTEV- 472
+ + E +A L A I +L+ R+ LE G V VN EV
Sbjct: 421 VRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVV 480
Query: 473 ---APFGGVKQSGLGREGS--KYGMDEFLE 497
G S S + FL
Sbjct: 481 DSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 454 bits (1169), Expect = e-150
Identities = 141/476 (29%), Positives = 211/476 (44%), Gaps = 13/476 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
I GK + + NP EV+ + G E DAI++A AF +W R
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTR 592
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 155
++ L K EL LE GK +A +V F+E+YA E R+
Sbjct: 593 AEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRV 652
Query: 156 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215
P +P GVA I PWNFPLA+ A+ G VV KPS T +
Sbjct: 653 GHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHL 712
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA------ 269
EL +AG+P GV N G +GD L+ P + I FTGS G +++ AA
Sbjct: 713 VELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQ 772
Query: 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 329
VKK+ E+GG I+ DDADL+ AV L + F GQ C +RV+V + +Y+KF
Sbjct: 773 ANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFI 832
Query: 330 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 389
+ K KVG G + + A++ ++ + E +G + G
Sbjct: 833 ERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEG-Y 891
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
F T++ +K E +++EE+FGPV ++ K ++AI AN T L IF+ + +
Sbjct: 892 FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHL 951
Query: 450 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGSKYGMDEFLEIKYVC 502
+ G + +N V PFGG + SG+G + G + F++ + V
Sbjct: 952 AKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVT 1007
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 416 bits (1071), Expect = e-141
Identities = 93/486 (19%), Positives = 159/486 (32%), Gaps = 38/486 (7%)
Query: 43 IDAYDGKTLEVHNPATGEVIAN-VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 101
++ N TGE + E A ++A + +L ++R+ LR
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 102 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--------I 153
L A +++ LE P GE+ A + +A+
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPSEFTPLT 211
A LP + + +G NFPLA ALA GC V+VK P T
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 212 ALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 267
+ AE QA +P + ++ GN +G AL++ P+++ + FTGS G+ L
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 268 AAGTVKKVS--LELGGNAPCIVFDDADLNVA--VNGALAAKFRNSGQTCVCANRVLVQEG 323
A + + ELG P +F A A + +A+ GQ C V
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNT 300
Query: 324 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383
AF + + + + P I + +V G V
Sbjct: 301 P---ETQAFIETAQ--SLIRQQSPSTLLTPGIRDSYQSQVV---SRGSDDGIDVTFSQAE 352
Query: 384 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 443
+ S + EE+FGP + ++ + + + ++ L A I
Sbjct: 353 SP-CVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHA 411
Query: 444 --NNLQRTWRVSEALEY--GLVGVNE---GLISTEVAPFGGVKQS---GLGREGSKYGMD 493
+ + ++ LE G + N G+ GG + +
Sbjct: 412 TEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIH 471
Query: 494 EFLEIK 499
+L
Sbjct: 472 RWLRPV 477
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 365 bits (940), Expect = e-122
Identities = 154/461 (33%), Positives = 250/461 (54%), Gaps = 8/461 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I G+W+++ + +V NPAT EV+ V ++ A +A +AF +WSK+ R+
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
+ L + LL HKEEL LIT+E GK KEA+GEV G + +EF A + G+ + +
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLTALAA 215
D + P+GV G I P+NFP M+ A+A G T ++KPSE TPL
Sbjct: 129 IATDVEAANYRYPIGVVGGIAPFNFP-MMVPCWMFPMAIALGNTFILKPSERTPLLTEKL 187
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
EL +AG+P GV NVV G A D+ + +L P+++ I+F GS VG+ + + +K+V
Sbjct: 188 VELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRV 246
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335
G IV +DA+L V + A F ++G+ C+ V V+EGI ++F +
Sbjct: 247 QSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEK 306
Query: 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE-PT 394
V ++K+G+G +GV GP+I + ++ +++E + +GA+++ GR + ++ PT
Sbjct: 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPT 366
Query: 395 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 454
+ NV +EM + ++E+F PV ++ K +EAI +AN + A +FT+N E
Sbjct: 367 IFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRE 426
Query: 455 ALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 493
++ G++G+N G + +A PF G K S G G D
Sbjct: 427 NIDAGMLGINLG-VPAPMAFFPFSGWKSSFFG-TLHANGKD 465
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 360 bits (925), Expect = e-119
Identities = 137/466 (29%), Positives = 228/466 (48%), Gaps = 14/466 (3%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
I GK + G+ + NPATGEV V+ + A+ SA A W+ R+
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
+ K+ LL + EL ++++ E GK + +A G++ G + EF E
Sbjct: 90 RVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLTALAA 215
P ++ ++QPVG+ ITP+NFP MI PA+ACG ++KPSE P +
Sbjct: 150 AGPGIDMYSIRQPVGIGAGITPFNFP-GMIPMWMFAPAIACGNAFILKPSERDPSVPIRL 208
Query: 216 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 275
AEL ++AG+P G++NVV G DA+LT P + ++F GST + + + AA K+
Sbjct: 209 AELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRA 267
Query: 276 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV-CANRVLVQEGIYEKFADAFSK 334
G I+ DADL+ A N + A + ++G+ C+ + V V E + D
Sbjct: 268 QCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVP 327
Query: 335 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-----GMT 389
V++L++G E GP++ K A +++ + ++ + +GAK+++ GR L G
Sbjct: 328 MVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENG-H 386
Query: 390 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449
F + +V +M + + E+FGPV ++ + EEA+ + G I+T +
Sbjct: 387 FIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAA 446
Query: 450 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 493
+ + G+VGVN I +A FGG K S G + +++G D
Sbjct: 447 RDFASRINIGMVGVNVP-IPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 345 bits (886), Expect = e-114
Identities = 72/424 (16%), Positives = 146/424 (34%), Gaps = 43/424 (10%)
Query: 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 130
+E ++ I SA A + ++ + ++ D +E+L ++ E G + +
Sbjct: 12 QEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKV 71
Query: 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190
+ A + K + + ++++ + P+GV + P P + + K
Sbjct: 72 IKNVFA--SKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKT 129
Query: 191 GPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTS 246
++ G ++V P L + A +AG P G ++ + D L+
Sbjct: 130 LISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKH 189
Query: 247 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 306
I TG +A+ K A + GN P + A++ AV L +K
Sbjct: 190 KDTAVILATGGSAMVKA----AYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTF 245
Query: 307 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKA 358
++G C V+V+ E F K + ++G P I
Sbjct: 246 DNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGK 305
Query: 359 ALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 418
+++ + V A+VL+ + V +++ SRE+ P+
Sbjct: 306 SVQHIANLAGLTVPADARVLIAE--------------ETKVGAKIPYSREK-LAPILAFY 350
Query: 419 CFKTEEEAIHMANDTNA----GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 474
+T +EA ++ D G I + + + + + VN
Sbjct: 351 TAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTP------GA 404
Query: 475 FGGV 478
GG+
Sbjct: 405 LGGI 408
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 352 bits (904), Expect = e-111
Identities = 120/441 (27%), Positives = 199/441 (45%), Gaps = 15/441 (3%)
Query: 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131
+ A+++A F WS+ A R+ L + LL + L+ E GK L +A+ E
Sbjct: 551 QAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSE 610
Query: 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKV 190
+ A F +YA + ++++G P L + GV AI+PWNFPLA+ +V
Sbjct: 611 LREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQV 670
Query: 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 250
AL G +VV KP+E TP A A L +AGIP + +V G+ IG AL P +
Sbjct: 671 TAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIA 729
Query: 251 KITFTGSTAVGKKL---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 307
+ FTGST V + + +A G + + E GG I A + + + FR+
Sbjct: 730 GVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRS 789
Query: 308 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367
+GQ C + VQE + ++ + + A + LK+GD GP+I+ A ++++ +
Sbjct: 790 AGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI 849
Query: 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EE 425
++ G F P + ++ L EEVFGP+ ++ ++ E E
Sbjct: 850 ARMKTEARLHFAGPAPEG---CFVAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLER 904
Query: 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGL 483
+ T GL + + + + ++ G + VN +I V PFGG SG
Sbjct: 905 VLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGT 964
Query: 484 G-REGSKYGMDEFLEIKYVCL 503
G + G + + F + V +
Sbjct: 965 GPKAGGPHYLARFATEQTVTI 985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 319 bits (820), Expect = e-104
Identities = 74/418 (17%), Positives = 149/418 (35%), Gaps = 30/418 (7%)
Query: 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131
E I+ A ++ + + K R + L Q E G + E
Sbjct: 8 ELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVI 67
Query: 132 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191
++ A + + ++ G + + + +PVG+ I P P + K
Sbjct: 68 KNHFASEFIYNKYKDEQTCGIL--EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSL 125
Query: 192 PALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSP 247
+L ++ P + AA+L A+ AG P ++ + + ++ +AL+
Sbjct: 126 ISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHD 185
Query: 248 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 307
+ I TG + K A + K GN P ++ + AD+ AV L +K +
Sbjct: 186 DIALILATGGPGMVKA----AYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFD 241
Query: 308 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367
+G C V+V + +Y++ + F+ ++ + V + LI+ A K+
Sbjct: 242 NGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDA-DKVRKVLLIDGALNAKIVGQP 300
Query: 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427
A+++ A V + L V + + E+ P + E+A+
Sbjct: 301 ATAIAEMAGVKVPADTK-----VLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAV 354
Query: 428 HMA----NDTNAGLAAYIFTN---NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGV 478
A G + ++TN N R + ++ + +N GG+
Sbjct: 355 AQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP------TTHGGI 406
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 282 bits (724), Expect = 5e-89
Identities = 110/467 (23%), Positives = 195/467 (41%), Gaps = 23/467 (4%)
Query: 37 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
++G + + + +P +A AI +A A W A+R
Sbjct: 67 VVGDEEV--WTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR 124
Query: 96 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEI 153
++ K D+L + E+ + QGK + +A + F F A+ A + GE
Sbjct: 125 AQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQ 184
Query: 154 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 213
+ P V + G AI+P+NF A+ G G V+ KPS+ L +
Sbjct: 185 PISVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASY 243
Query: 214 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA---- 269
A + +AG+PP ++ V + P GD + +S + I FTGS K L A
Sbjct: 244 AVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLD 303
Query: 270 --GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 327
T +++ E GG V AD++ V+G L + F GQ C +R+ V + ++ +
Sbjct: 304 RFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQ 363
Query: 328 FADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHS 385
+ +KVGD + G +I+ A +++ ++E A S +L GG+ +
Sbjct: 364 IKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE 423
Query: 386 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNA-GLAAYIF 442
+ EP ++ + + + +EE+FGPV + + + E + + + T + GL +F
Sbjct: 424 SVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVF 483
Query: 443 TNNLQRTWRVSEALEYGLVG---VNEGLISTEVA--PFGGVKQSGLG 484
+ + L G +N+ + V PFGG + SG
Sbjct: 484 AQDKAIVQEATRMLRNA-AGNFYINDKSTGSVVGQQPFGGARASGTN 529
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 6e-88
Identities = 128/438 (29%), Positives = 201/438 (45%), Gaps = 32/438 (7%)
Query: 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VG 130
+ +A+ A AF+S R + L L+ ++EL + + K A
Sbjct: 19 KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 131 EVDYGAKFIEFYAEE----AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 186
EV Y + IE+ ++ A E P T D L++ +P+GV I WN+P +
Sbjct: 79 EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDE-LYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 187 TRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 243
+ P A+A G VV+KPSE + A A + + + + V+ G L
Sbjct: 138 ---IQPMVGAIAAGNAVVLKPSELSENMASLLATI-IPQYLDKDLYPVING-GVPETTEL 192
Query: 244 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 303
L I +TGST VGK +M AA + V+LELGG +PC V + DL+VA
Sbjct: 193 LKERFD-HILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251
Query: 304 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAA 359
KF NSGQTCV + +L I + + K++K +GE + +I+
Sbjct: 252 KFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-----YGEDAKKSRDYGRIISARH 306
Query: 360 LEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 419
++V +E KV GG + + PT+L++V + V +EE+FGPV P++C
Sbjct: 307 FQRVMGLIEG-----QKVAYGGTGDAATR-YIAPTILTDVDPQSPVMQEEIFGPVLPIVC 360
Query: 420 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGG 477
++ EEAI N LA Y+F++N + ++ G V N+ ++ + PFGG
Sbjct: 361 VRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGG 420
Query: 478 VKQSGLGREGSKYGMDEF 495
V SG+G K + F
Sbjct: 421 VGNSGMGSYHGKKSFETF 438
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 5e-79
Identities = 115/441 (26%), Positives = 191/441 (43%), Gaps = 37/441 (8%)
Query: 73 TKDAISSAFD----AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 128
+ I S F F + + R + L + + ++ +KE L + + GKP
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 129 --------VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWN 180
+ E+D+ ++ + V P +V+++P GV I P+N
Sbjct: 86 DLAEIGAVLHEIDFALAHLDEWVA-PVSVPSPD--IIAPSE-CYVVQEPYGVTYIIGPFN 141
Query: 181 FPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP 237
+P+ + + P A+ G T ++KPSE TP T+ ++ + P V V+ G
Sbjct: 142 YPVNLT---LTPLIGAIIGGNTCIIKPSETTPETSAVIEKI-IAEAFAPEYVAVIQG-GR 196
Query: 238 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 297
D LL+ P I FTGS VGK +M AA + V LELGG P IV DADL+ V
Sbjct: 197 DENSHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTV 255
Query: 298 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 357
N + KF NSGQT + + + V + + + + VK E G L+ +
Sbjct: 256 NQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTE-----LPEINSTGKLVTE 310
Query: 358 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 417
++++ + +E +VL+G + TV+ V+ + EE+FGP+ P+
Sbjct: 311 RQVQRLVSLLEAT---QGQVLVGSQADVSKR-ALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 418 LCFKTEEEAIHMANDTNAG-LAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAP 474
L F + AI N + LA Y+F ++ + ++ G VN + + P
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426
Query: 475 FGGVKQSGLGREGSKYGMDEF 495
FGG+ SG+G + F
Sbjct: 427 FGGIGASGMGEYHGHFSYLTF 447
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 64/459 (13%), Positives = 118/459 (25%), Gaps = 159/459 (34%)
Query: 48 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK------LTAAERSKGLRK 101
L V A + N C K+ +D S SK + + + G +
Sbjct: 19 KDILSVFEDA---FVDNFDC---KDVQDMPKSIL------SKEEIDHIIMSKDAVSGTLR 66
Query: 102 WYDLLMAHKEELGQLITLEQGKPLKEAVGEV---DYGAKFI---------------EFYA 143
+ L++ +EE+ +++ V EV +Y F+ Y
Sbjct: 67 LFWTLLSKQEEM-----------VQKFVEEVLRINYK--FLMSPIKTEQRQPSMMTRMYI 113
Query: 144 EEAKRVYGE---IIPATLPDRRLF-VLK------QP---VGVAGAITPWNFPLAMITRKV 190
E+ R+Y + + + + L+ +P V + G ++
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG----------VL---- 159
Query: 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL-----LT 245
G G T + +Q + + + + N L L
Sbjct: 160 G----SGKTW---------VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206
Query: 246 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC-IVFDDADLNVAV-NGALAA 303
T + KL + + L+ C +V + V N
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN------VQNAKAWN 260
Query: 304 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 363
F S C ++L+ + +V D ++
Sbjct: 261 AFNLS---C----KILL--------------TTRFKQVTDFLSAATTTHISLD----HHS 295
Query: 364 ETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC-- 419
T D K K L + + + L EV P
Sbjct: 296 MTLTPDE-VKSLLLKYL-------------------DCRPQDL--PREVLT-TNPRRLSI 332
Query: 420 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS-EALE 457
E+I T ++ + L S LE
Sbjct: 333 IA---ESIRDGLATWDNW-KHVNCDKLTTIIESSLNVLE 367
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 509 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.81 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.34 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-114 Score=913.97 Aligned_cols=472 Identities=38% Similarity=0.627 Sum_probs=452.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++++++|
T Consensus 7 ~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 86 (490)
T 2wme_A 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDEL 86 (490)
T ss_dssp BCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||+.+++. |+..+++.++||+.+.+++.+...+. .++...+++++|+|||++|+|||||+.+.++++++
T Consensus 87 a~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ 165 (490)
T 2wme_A 87 AALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165 (490)
T ss_dssp HHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchhhhhhHHH
Confidence 99999999999999986 69999999999999998887766543 24567889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHH-HhhcC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA-GAAGT 271 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~~~~~ 271 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++ .++.+
T Consensus 166 ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~ 245 (490)
T 2wme_A 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245 (490)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999998876 55677
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++++
T Consensus 246 lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~ 325 (490)
T 2wme_A 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNF 325 (490)
T ss_dssp CCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai 427 (509)
||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 326 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 405 (490)
T 2wme_A 326 GPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHH
Confidence 9999999999999999999999999999998653 247999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 010482 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 428 ~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.-
T Consensus 406 ~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g 484 (490)
T 2wme_A 406 RRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECC
Confidence 9999999999999999999999999999999999999987777899999999999999999999999999999998743
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-111 Score=889.14 Aligned_cols=472 Identities=57% Similarity=0.988 Sum_probs=454.7
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.++||+.+.++..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999988877765554445677899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++|
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 331 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLG 331 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 411 (484)
T 3ifg_A 332 PLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLAND 411 (484)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999999875446899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 412 ~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 412 TEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp SSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999877778999999999999999999999999999999874
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-110 Score=885.51 Aligned_cols=472 Identities=59% Similarity=0.984 Sum_probs=454.9
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
+..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
+|++++++|+|||..+++.|+..+++.++||+.+..+..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 111 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 190 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA 190 (504)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999887776555444567789999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 191 ~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 270 (504)
T 3ek1_A 191 PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270 (504)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++
T Consensus 271 lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 350 (504)
T 3ek1_A 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVI 350 (504)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred cCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
||++++.+++++.++|++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 351 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 428 (504)
T 3ek1_A 351 GPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQAN 428 (504)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999999763 579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 429 ~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 429 DTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp CSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred CCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999998877789999999999999999999999999999998864
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-109 Score=884.92 Aligned_cols=473 Identities=39% Similarity=0.669 Sum_probs=454.8
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhh--HhhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|++++++|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 3568999999987778899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
++|++++++|+|||+.+++.|+..+++.++|++.++++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999888776655443345678899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
+|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~ 271 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN 271 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 272 ~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~ 351 (520)
T 3ed6_A 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTE 351 (520)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCS
T ss_pred cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 352 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 431 (520)
T 3ed6_A 352 MGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA 431 (520)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999998642 35899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 432 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 432 IQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 9999999999999999999999999999999999999998877789999999999999999999999999999998864
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-109 Score=882.35 Aligned_cols=472 Identities=44% Similarity=0.749 Sum_probs=453.8
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35789999999887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEe-ecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..+++.|+..+++.++|++..+++..+...+.. ++...++.+ +|+|||++|+|||||+.+.+++++
T Consensus 91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 169 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS 169 (506)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999988877654433 456678889 999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 249 (506)
T 3rh9_A 170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249 (506)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++
T Consensus 250 l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 329 (506)
T 3rh9_A 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDI 329 (506)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 330 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 409 (506)
T 3rh9_A 330 GPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAG 409 (506)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999986433 68999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 410 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 410 NDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp TCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999999999999998887889999999999999999999999999999998753
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-109 Score=879.57 Aligned_cols=471 Identities=35% Similarity=0.602 Sum_probs=452.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 25 ~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 103 (498)
T 4f3x_A 25 DTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE 103 (498)
T ss_dssp CCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3568999999987656 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..++ +.|+..+++.++|++.++++..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 104 la~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (498)
T 4f3x_A 104 FAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLA 183 (498)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHH
Confidence 9999999999999999 889999999999999998887666544333466789999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++++
T Consensus 184 ~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 262 (498)
T 4f3x_A 184 PAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKT 262 (498)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999 999999999998888999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 263 ~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~ 342 (498)
T 4f3x_A 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEI 342 (498)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSS
T ss_pred CCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCC-EEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
||++++.+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 343 Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 422 (498)
T 4f3x_A 343 GPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWA 422 (498)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHH
T ss_pred ccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999 9999998654468999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 423 N~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 423 NDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999999999998877799999999999999999999999999999998753
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-109 Score=878.53 Aligned_cols=474 Identities=37% Similarity=0.646 Sum_probs=453.3
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 91 (497)
T 3k2w_A 12 NKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHI 91 (497)
T ss_dssp TTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999987788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.++|++...++..+...+...++...++.++|+|||++|+|||||+...++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 171 (497)
T 3k2w_A 92 LAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP 171 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665443344667889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l 251 (497)
T 3k2w_A 172 ALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYM 251 (497)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++|
T Consensus 252 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 331 (497)
T 3k2w_A 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMG 331 (497)
T ss_dssp CCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBC
T ss_pred CCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--cCC--CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
|++++.+++++.++|++++++|+++++||.. .+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 411 (497)
T 3k2w_A 332 PKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIE 411 (497)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999973 222 589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.+
T Consensus 412 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 412 FCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp HHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 999999999999999999999999999999999999988777899999999999999999999999999999988754
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-108 Score=878.54 Aligned_cols=473 Identities=40% Similarity=0.657 Sum_probs=454.8
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhh--HhhhcCCHHHHHHHHHHHHHHHHHh
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAH 109 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~ 109 (509)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 35799999999987788999999999 99999999999999999999999999 8899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 110 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 110 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
+++|++++++|+|||..+++.|+..+++.+++++..+++..+...+...++...++.++|+|||++|+|||||+...+++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 181 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999998877665544334567899999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 261 (528)
T 3u4j_A 182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261 (528)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus 262 ~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 341 (528)
T 3u4j_A 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT 341 (528)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTC
T ss_pred hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
++||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 342 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 421 (528)
T 3u4j_A 342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVA 421 (528)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred ccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999987532 689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 422 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 422 LANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999998877889999999999999999999999999999998864
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-108 Score=877.86 Aligned_cols=470 Identities=38% Similarity=0.638 Sum_probs=449.0
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++++++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999865678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCC---CCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 113 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+.. .++...++.++|+|||++|+|||||+...++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 99999999999999998 8999999999999999888766544432 2233578999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+++++|++||+|++|+||||+++|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred h-cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC
Q 010482 269 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 347 (509)
Q Consensus 269 ~-~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~ 347 (509)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+
T Consensus 278 a~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~ 357 (517)
T 2o2p_A 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLER 357 (517)
T ss_dssp HHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTST
T ss_pred HHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCC--HHH
Q 010482 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEE 425 (509)
Q Consensus 348 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~--~~e 425 (509)
++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +||
T Consensus 358 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~de 437 (517)
T 2o2p_A 358 DTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDA 437 (517)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHH
Confidence 999999999999999999999999999999999976533589999999999999999999999999999999999 999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 438 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 438 VLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999999999999999999999999999999999877778999999999999999999999999999999875
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-108 Score=873.33 Aligned_cols=472 Identities=40% Similarity=0.669 Sum_probs=452.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH-----hhhcCCHHHHHHHHHHHHHHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSKLTAAERSKGLRKWYDLLMA 108 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~ 108 (509)
.++||||+|+++.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~ 87 (503)
T 3iwj_A 8 RQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTE 87 (503)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHH
T ss_pred CceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHH
Confidence 5689999999887788999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhcccc-C--CCCCCceeEEEeecceEEEEEcCCChhHHH
Q 010482 109 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 185 (509)
Q Consensus 109 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 185 (509)
++++|++++++|+|||..+++.|+..+++.++|++.+.+++.+... + ....+...++.++|+|||++|+|||||+.+
T Consensus 88 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 167 (503)
T 3iwj_A 88 KKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLM 167 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHH
Confidence 9999999999999999999999999999999999999888766542 1 112356788999999999999999999999
Q ss_pred HHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHH
Q 010482 186 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265 (509)
Q Consensus 186 ~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 265 (509)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|+
T Consensus 168 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 247 (503)
T 3iwj_A 168 ATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 266 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 266 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+.++.++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 248 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 327 (503)
T 3iwj_A 248 TAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPL 327 (503)
T ss_dssp HHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 423 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~ 423 (509)
++++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 407 (503)
T 3iwj_A 328 EEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTE 407 (503)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCH
Confidence 9999999999999999999999999999999999998653 46899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 408 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 408 EEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999988
Q ss_pred ec
Q 010482 504 GD 505 (509)
Q Consensus 504 ~~ 505 (509)
+.
T Consensus 488 ~~ 489 (503)
T 3iwj_A 488 YI 489 (503)
T ss_dssp EC
T ss_pred eC
Confidence 63
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-108 Score=869.85 Aligned_cols=473 Identities=57% Similarity=1.020 Sum_probs=455.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.++|++....+..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999887776665554445677889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 328 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG 328 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 408 (481)
T 3jz4_A 329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND 408 (481)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhc
Confidence 99999999999999999999999999999874346799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|++++
T Consensus 409 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 409 TEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp SSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999999999998877889999999999999999999999999999998764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-108 Score=871.43 Aligned_cols=473 Identities=35% Similarity=0.575 Sum_probs=448.0
Q ss_pred CCCcCCccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHH
Q 010482 27 SYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLL 106 (509)
Q Consensus 27 ~~~~~~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l 106 (509)
.....+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|
T Consensus 5 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 84 (505)
T 3prl_A 5 LQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLL 84 (505)
T ss_dssp ----CEECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCccccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 33334456799999999887788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCC-C----CceeEEEeecceEEEEEcCCCh
Q 010482 107 MAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNF 181 (509)
Q Consensus 107 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~i~p~n~ 181 (509)
++++++|++++++|+|||..+++.|+..+++.++|++....+..+...+... + +...++.++|+|||++|+||||
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 164 (505)
T 3prl_A 85 EERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNY 164 (505)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCcc
Confidence 9999999999999999999999999999999999999998887665433221 2 3567899999999999999999
Q ss_pred hHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHH
Q 010482 182 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 261 (509)
Q Consensus 182 P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 261 (509)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|
T Consensus 165 P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 244 (505)
T 3prl_A 165 PVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTG 244 (505)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhcccc
Q 010482 262 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 341 (509)
Q Consensus 262 ~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~ 341 (509)
+.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 245 ~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 322 (505)
T 3prl_A 245 ERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTV 322 (505)
T ss_dssp HHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhccc
Confidence 99999888 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC
Q 010482 342 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 421 (509)
Q Consensus 342 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~ 421 (509)
|||+ +++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 323 GSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp SCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 9999 9999999999999999999999999999999999974 37999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 422 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 422 ~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+
T Consensus 399 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~ 478 (505)
T 3prl_A 399 DANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERV 478 (505)
T ss_dssp SHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999876 45889999999999999999999999999999
Q ss_pred EEEec
Q 010482 501 VCLGD 505 (509)
Q Consensus 501 ~~~~~ 505 (509)
|+++.
T Consensus 479 v~~~~ 483 (505)
T 3prl_A 479 TVLNL 483 (505)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98864
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-108 Score=870.81 Aligned_cols=471 Identities=39% Similarity=0.619 Sum_probs=450.1
Q ss_pred ccCeeEcCEeeeCCCCCe-EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 33 SRQGLIGGKWIDAYDGKT-LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~-~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
..++||||+|+.+.++++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 98 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356899999998766678 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
+|++++++|+|||+.+++.|+..+++.++|++.+.++..+...+.. ++...++.++|+|||++|+|||||+...+++++
T Consensus 99 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 177 (503)
T 1a4s_A 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999888766543332 344678999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 178 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 256 (503)
T 1a4s_A 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT 256 (503)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999977 8999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 257 ~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 336 (503)
T 1a4s_A 257 VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRM 336 (503)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc--C----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
||++++.+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 416 (503)
T 1a4s_A 337 GGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEE 416 (503)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHH
Confidence 999999999999999999999999999999764 1 2579999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 417 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 417 VLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998864
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-107 Score=864.12 Aligned_cols=471 Identities=40% Similarity=0.641 Sum_probs=449.8
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876678999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|++++++|+|||+.++. .|+..+++.++|++...++..+...+. .++...++.++|+|||++|+|||||+...+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 699999999999999998877664433 23456789999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred -cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 270 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 270 -~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976433579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++|++.|+|.++.
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 99999999999999999999999999999999999998766789999999999999999999999999999998864
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-107 Score=864.54 Aligned_cols=465 Identities=35% Similarity=0.584 Sum_probs=441.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|++++++|+++.++|
T Consensus 26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 105 (497)
T 3i44_A 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDM 105 (497)
T ss_dssp CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEE-eecceEEEEEcCCChhHHHHHHhhh
Q 010482 114 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
++++++|+|||+.+++ .|+..+++.+++++............. .+...++. ++|+|||++|+|||||+.+.+++++
T Consensus 106 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (497)
T 3i44_A 106 AKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVI 183 (497)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 899999999999998766543322111 13446677 9999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 184 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~ 263 (497)
T 3i44_A 184 PALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT 263 (497)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 264 ~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~ 342 (497)
T 3i44_A 264 LKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHI 342 (497)
T ss_dssp TCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCB
T ss_pred CCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCc-ccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 343 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 422 (497)
T 3i44_A 343 GPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVT 422 (497)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHH
Confidence 9999999999999999999999999999994 332 2589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
++|+++|||+++|||+|.++++++++++++|+||||. ....+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 423 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 423 LANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9999999999999999999999999999999999994 555688999999999999999999999999999985
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-107 Score=862.65 Aligned_cols=471 Identities=39% Similarity=0.642 Sum_probs=449.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||+.+++.|+..+++.++|++...++..+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 166 (479)
T 2imp_A 87 SALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPA 166 (479)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877666543333345567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++++|
T Consensus 167 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 246 (479)
T 2imp_A 167 LLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT 246 (479)
T ss_dssp HHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC-CCcccC
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG-EGVVQG 352 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~-~~~~~G 352 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+| +++++|
T Consensus 247 ~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~g 326 (479)
T 2imp_A 247 KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMG 326 (479)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBC
T ss_pred cEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 327 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~ 406 (479)
T 2imp_A 327 PLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMAND 406 (479)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhc
Confidence 99999999999999999999999999999763235799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 407 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 407 SDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999999999999999999877678999999999999999999999999999999764
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-107 Score=865.74 Aligned_cols=471 Identities=37% Similarity=0.615 Sum_probs=450.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999998888766544432335567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999777899999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCc
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp 353 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++||
T Consensus 267 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 346 (515)
T 2d4e_A 267 RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGP 346 (515)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--------CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|+||
T Consensus 347 li~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~de 425 (515)
T 2d4e_A 347 LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEE 425 (515)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHH
Confidence 99999999999999999999999999997642 2589999999999 99999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 426 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 426 ALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998864
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-107 Score=863.49 Aligned_cols=471 Identities=39% Similarity=0.615 Sum_probs=449.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999876678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|++++++|+|||+.++. .|+..+++.++|++...++..+...+. .++...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 178 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHH
Confidence 9999999999999999875 699999999999999988876654433 23456789999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 179 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 258 (500)
T 1o04_A 179 LGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258 (500)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred -cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 270 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 270 -~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 259 ~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 338 (500)
T 1o04_A 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSK 338 (500)
T ss_dssp HTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 339 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (500)
T 1o04_A 339 TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVG 418 (500)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999976433579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 419 RANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 99999999999999999999999999999999999998766789999999999999999999999999999998864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-107 Score=869.23 Aligned_cols=468 Identities=36% Similarity=0.597 Sum_probs=448.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHh----hhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
|++++++|+|||..++ |+..+++.+++++.+.++ +.+...+. .++. .++.++|+|||++|+|||||+...++
T Consensus 94 la~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~ 169 (517)
T 3r31_A 94 LSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIACW 169 (517)
T ss_dssp HHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHHH
Confidence 9999999999999999 999999999999999887 66654443 2344 89999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+++|+.|++.+
T Consensus 170 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 170 KAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 788999999999999999999999999999999
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 328 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
+++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 329 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (517)
T 3r31_A 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDE 408 (517)
T ss_dssp CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHH
T ss_pred CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 9999999999999999999999999999999993121 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 409 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 409 VLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp HHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred HHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999999998877889999999999999999999999999999998763
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-107 Score=861.21 Aligned_cols=470 Identities=36% Similarity=0.613 Sum_probs=447.8
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
+..++||||+|+.+.+ .+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999998655 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..+++. |+..+++.+++++..+++..+...+...++...++.++|+|||++|+|||||+...++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999998887766544332234467899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999888899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++++
T Consensus 260 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 339 (495)
T 1wnd_A 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 339 (495)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCC-CEEEeCCc-ccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+||++++.+++++.++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (495)
T 1wnd_A 340 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 418 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999 99999997 53 2579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 419 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999998776778999999999999999999999999999999764
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-107 Score=865.88 Aligned_cols=469 Identities=34% Similarity=0.564 Sum_probs=447.8
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||+.+++ .|+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 8999999999999998887766543321 23467899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 99999999999999999999999999999997643 2579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 407 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 407 IANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999877 7789999999999999999999999999999998764
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-107 Score=867.18 Aligned_cols=472 Identities=27% Similarity=0.461 Sum_probs=448.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 27 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (521)
T 4e4g_A 27 LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNEL 106 (521)
T ss_dssp ECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.....+.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 186 (521)
T 4e4g_A 107 AEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPA 186 (521)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988877766543322345668899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+++|+.|++.+++++|
T Consensus 187 LaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lk 265 (521)
T 4e4g_A 187 IACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGK 265 (521)
T ss_dssp HHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999994 5677999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|+++++++|
T Consensus 266 pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~g 345 (521)
T 4e4g_A 266 RAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMG 345 (521)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBC
T ss_pred CeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccC
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
|++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 346 pli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (521)
T 4e4g_A 346 PVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALS 425 (521)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999997531 3589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|+||+| +++|.+|+++||+.|+|++++
T Consensus 426 ~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 426 LPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999999999999999999999999999999997654 478999999999999 789999999999999998864
Q ss_pred c
Q 010482 506 M 506 (509)
Q Consensus 506 ~ 506 (509)
.
T Consensus 506 ~ 506 (521)
T 4e4g_A 506 P 506 (521)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-106 Score=863.32 Aligned_cols=468 Identities=31% Similarity=0.501 Sum_probs=447.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 38 ~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 38 YPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp ECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997 578999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHH-HHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||+.+++.|+..+++.++|++.. .....+...+.. ++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 194 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAV 194 (538)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999998 566666544432 356788999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++.+
T Consensus 195 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 274 (538)
T 3qan_A 195 APIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV 274 (538)
T ss_dssp HHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999988
Q ss_pred ------CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 272 ------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 272 ------~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 275 ~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 354 (538)
T 3qan_A 275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPT 354 (538)
T ss_dssp CTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTT
T ss_pred cccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
|+++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 355 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~de 433 (538)
T 3qan_A 355 NRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDH 433 (538)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999 99999987533689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEEC-CCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN-~~~~~-~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~ 502 (509)
||+++|+++|||+++|||+|.++++++++++++|+|||| ++... .+.+||||+|+||+| +++|.+|+++||+.|+|+
T Consensus 434 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~ 513 (538)
T 3qan_A 434 ALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVS 513 (538)
T ss_dssp HHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEE
Confidence 999999999999999999999999999999999999999 55554 789999999999999 999999999999999998
Q ss_pred Eec
Q 010482 503 LGD 505 (509)
Q Consensus 503 ~~~ 505 (509)
++.
T Consensus 514 ~~~ 516 (538)
T 3qan_A 514 EMY 516 (538)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-105 Score=852.24 Aligned_cols=471 Identities=32% Similarity=0.549 Sum_probs=428.2
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCC-CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||+.+++.|+..+++.+++++...+.+.+...+.. .++...++.++|+|||++|+|||||+...++++++
T Consensus 87 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 166 (485)
T 4dng_A 87 IMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP 166 (485)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766654432 34567899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHH-HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 193 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
||++||+||+|||+.+|+++ ..|.++|.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 167 ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~ 246 (485)
T 4dng_A 167 AIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246 (485)
T ss_dssp HHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhh
Confidence 99999999999999999999 99999999999999999999998778999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++
T Consensus 247 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~ 326 (485)
T 4dng_A 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVV 326 (485)
T ss_dssp TCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred ccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 327 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an 403 (485)
T 4dng_A 327 GPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMAN 403 (485)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999976 479999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+|+++|.+++++||+.|+|+++.-+
T Consensus 404 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 480 (485)
T 4dng_A 404 DTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQY 480 (485)
T ss_dssp CSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC--
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecCC
Confidence 99999999999999999999999999999999998754 68899999999999999999999999999999887543
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-106 Score=853.87 Aligned_cols=468 Identities=58% Similarity=0.986 Sum_probs=447.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+. .+++++||+||+++++++.++.+|++.|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999853 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.+.++..+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999888766654432345677899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeec---CCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+ |++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 250 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 8777899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGV 349 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~-~~~G~p~~~~~ 349 (509)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|||.++++
T Consensus 251 ~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~ 330 (487)
T 2w8n_A 251 SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGT 330 (487)
T ss_dssp TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCc-eeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
++||++++.+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 331 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 409 (487)
T 2w8n_A 331 TQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIA 409 (487)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999764 2578 999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 410 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 410 IANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 9999999999999999999999999999999999999877777899999999999999999999999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-105 Score=853.63 Aligned_cols=470 Identities=34% Similarity=0.561 Sum_probs=433.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 13 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 92 (508)
T 3r64_A 13 TKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEI 92 (508)
T ss_dssp TSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 56899999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCC-CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..+++.|+..+++.+++++.+.+...+ ..+.. .++...++.++|+|||++|+|||||+...++++++
T Consensus 93 a~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 171 (508)
T 3r64_A 93 VEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAP 171 (508)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999988877665 43332 34567899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHH-HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc-
Q 010482 193 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG- 270 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~- 270 (509)
||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~ 251 (508)
T 3r64_A 172 ALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAING 251 (508)
T ss_dssp HHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSS
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcc
Confidence 99999999999999999999 9999999999999999999999878999999999999999999999999999999998
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus 252 ~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 331 (508)
T 3r64_A 252 GPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGT 331 (508)
T ss_dssp SSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSC
T ss_pred cCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 332 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 408 (508)
T 3r64_A 332 LVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAEL 408 (508)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 3799999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
+|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|.+|+++||+.|+|+++...
T Consensus 409 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~ 487 (508)
T 3r64_A 409 ANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSA 487 (508)
T ss_dssp HTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEECCS
T ss_pred HhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEeccc
Confidence 9999999999999999999999999999999999998754 68899999999999999999999999999999887543
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-105 Score=848.61 Aligned_cols=457 Identities=38% Similarity=0.647 Sum_probs=432.6
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 115 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 115 (509)
+||||+|+++ ++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999985 55 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhh
Q 010482 116 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195 (509)
Q Consensus 116 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 195 (509)
++++|+|||..+++.|+..+++.++|++...++..+...+.. +...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988766654432 567889999999999999999999999999999999
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||+||+|||+.+|+++..|++++.++ |+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999988888999999999999999999999999999887
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
||++++.+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN 389 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIAN 389 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHh
Confidence 99999999999999999999999999999975 3699999999 9999999999999999999999999 99999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 390 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 390 STEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp CSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999865 335899999999999999999999999999999875
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-105 Score=848.16 Aligned_cols=454 Identities=30% Similarity=0.491 Sum_probs=437.8
Q ss_pred eEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh
Q 010482 50 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 129 (509)
Q Consensus 50 ~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 129 (509)
+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCH
Q 010482 130 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209 (509)
Q Consensus 130 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p 209 (509)
.|+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999888776644332 456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 210 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
+++..|++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+++|+.|++.+++++||+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 99999999999999999999999998888888 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||++++.+++++.++|++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~ 449 (509)
++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 323 a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 402 (484)
T 3ros_A 323 AIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRA 402 (484)
T ss_dssp HHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHH
T ss_pred HHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 99999999999986445689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 450 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 450 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 403 ~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 403 KKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999998777899999999999999999999999999999998863
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-105 Score=844.15 Aligned_cols=463 Identities=33% Similarity=0.564 Sum_probs=441.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.+ +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35899999998633 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCC----cee-EEEeecceEEEEEcCCChhHHHHHH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
++++++|+|||+.+++.|+..+++.++|++.+.++..+...+...++ ... ++.++|+|||++|+|||||+.+.++
T Consensus 83 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (475)
T 1euh_A 83 GAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGS 162 (475)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHH
Confidence 99999999999999999999999999999998877666543322234 456 8999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 163 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 242 (475)
T 1euh_A 163 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242 (475)
T ss_dssp HHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999997778999999999999999999999999999988
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.| +
T Consensus 243 a--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~ 319 (475)
T 1euh_A 243 G--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-D 319 (475)
T ss_dssp T--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-T
T ss_pred C--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-c
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~ 396 (475)
T 1euh_A 320 ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396 (475)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHH
Confidence 99999999999999999999999999999999975 369999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECC-CCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||+ +....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 397 ~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999999999999999999999999998 666678999999999999999999999999999999875
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-105 Score=848.33 Aligned_cols=468 Identities=29% Similarity=0.495 Sum_probs=442.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.+.||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 24 ~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (500)
T 2j6l_A 24 NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVL 101 (500)
T ss_dssp EECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999995 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.+.+++.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 102 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 181 (500)
T 2j6l_A 102 GSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIA 181 (500)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHH
Confidence 99999999999999999999999999999988877666544433344556789999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHH----HcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
|++||+||+|||+.+|+++..|++++. ++|+|+|++|+|+| +.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 182 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa 260 (500)
T 2j6l_A 182 MICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ 260 (500)
T ss_dssp HHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhc
Confidence 999999999999999999999888765 56999999999999 7889999999999999999999999999999999
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||.++++
T Consensus 261 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (500)
T 2j6l_A 261 ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNV 340 (500)
T ss_dssp HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 341 ~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 420 (500)
T 2j6l_A 341 LYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAW 420 (500)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764335799999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHH--hhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+|+++|||+++|||+|.+++++++ .++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 421 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 421 NNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp HHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred HhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999 779999999998654 346899999999999999999999999999999875
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-105 Score=844.39 Aligned_cols=471 Identities=32% Similarity=0.536 Sum_probs=445.2
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 165 (486)
T 1t90_A 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA 165 (486)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999877777666543322234567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+++|+.|++.++++++
T Consensus 166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999 56789999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCe-EEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~r-v~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|+|+++++++|
T Consensus 245 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~g 323 (486)
T 1t90_A 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLG 323 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccC
Confidence 99999999999999999999999999999999999999999999 999999 9999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
|++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 324 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN 403 (486)
T 1t90_A 324 PVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIAN 403 (486)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999997432 2579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEecc
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|.++..
T Consensus 404 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~ 481 (486)
T 1t90_A 404 KSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYP 481 (486)
T ss_dssp HSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecC
Confidence 9999999999999999999999999999999998654 3478999999999999 8999999999999999988653
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-104 Score=846.98 Aligned_cols=467 Identities=31% Similarity=0.513 Sum_probs=441.9
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999963 6789999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC-CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||+.+++.|+..+++.++||+...++..+...+ ...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999998887765432 223455678999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh--
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 269 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-- 269 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 275 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999987889999999999999999999999999999998
Q ss_pred ----cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 270 ----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 270 ----~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 276 ~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p- 354 (516)
T 1uzb_A 276 APGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA- 354 (516)
T ss_dssp CTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-
T ss_pred cccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 355 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 433 (516)
T 1uzb_A 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAE 433 (516)
T ss_dssp GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999 89999976323579999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~ 502 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+++++||+.|+|+
T Consensus 434 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 434 ALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 9999999999999999999999999999999999999998654 3578999999999999 579999999999999997
Q ss_pred Ee
Q 010482 503 LG 504 (509)
Q Consensus 503 ~~ 504 (509)
++
T Consensus 514 ~~ 515 (516)
T 1uzb_A 514 ER 515 (516)
T ss_dssp EE
T ss_pred ec
Confidence 74
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-105 Score=847.98 Aligned_cols=463 Identities=31% Similarity=0.510 Sum_probs=441.9
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH-hhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+.+ + .+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|++++++|
T Consensus 20 ~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 97 (501)
T 1uxt_A 20 PSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 97 (501)
T ss_dssp CEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57999999986 3 7899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCC--CC--CceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++++++|+|||..+++.|+..+++.++|++.+.++..+...+.. .. +...++.++|+|||++|+|||||+.+.+++
T Consensus 98 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (501)
T 1uxt_A 98 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177 (501)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999998877766543332 12 336789999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|++||+|++|+||||+++|+.|++.++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa 256 (501)
T 1uxt_A 178 ITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256 (501)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999977 89999999999999999999999999999888
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||.|+++
T Consensus 257 --l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 334 (501)
T 1uxt_A 257 --VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334 (501)
T ss_dssp --SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred --CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCC-ceeecEEEecCC---CCCcccccccccceEEEEEeCCHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++||++++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||
T Consensus 335 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~de 411 (501)
T 1uxt_A 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQ 411 (501)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHH
Confidence 9999999999999999999999999999999975 46 899999999999 9999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCC-CCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~-~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 412 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~ 491 (501)
T 1uxt_A 412 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 491 (501)
T ss_dssp HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEe
Confidence 99999999999999999999999999999999999999987 55678999999999999999999999999999999886
Q ss_pred c
Q 010482 505 D 505 (509)
Q Consensus 505 ~ 505 (509)
.
T Consensus 492 ~ 492 (501)
T 1uxt_A 492 Y 492 (501)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-105 Score=843.72 Aligned_cols=463 Identities=36% Similarity=0.592 Sum_probs=421.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999999877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..++ +.|+..+++.+++++....+..+... ....++.++|+|||++|+|||||+...++++++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAA 162 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999 78999999999999998877655431 245788999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~ 242 (478)
T 3ty7_A 163 AFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDF 242 (478)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTT
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++|
T Consensus 243 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 322 (478)
T 3ty7_A 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVG 322 (478)
T ss_dssp CEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-cC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRR-HS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
|++++.+++++.+++++++++|+++++||.. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 323 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~ 402 (478)
T 3ty7_A 323 PIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQI 402 (478)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHH
Confidence 9999999999999999999999999999943 22 35899999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
+|+++|||+++|||+|.++++++++++++|+||||+ ....+.+||||+|+||+|+++|.+|+++||+.|+|+
T Consensus 403 an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 403 ANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEE
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 999999999999999999999999999999999999 555678999999999999999999999999999986
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-103 Score=826.54 Aligned_cols=456 Identities=35% Similarity=0.545 Sum_probs=437.8
Q ss_pred CCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 010482 48 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 127 (509)
Q Consensus 48 ~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 127 (509)
..+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCC
Q 010482 128 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 207 (509)
Q Consensus 128 a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~ 207 (509)
++.|+..+++.+++++.......+.. +...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~ 164 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPN 164 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 99999999999999999988776654 33334567889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEE
Q 010482 208 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 287 (509)
Q Consensus 208 ~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 287 (509)
+|+++..|+++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus 165 tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV 243 (462)
T 3etf_A 165 VTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_dssp CHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEE
T ss_pred CcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEE
Confidence 999999999999999999999999999 4678899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 288 ~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++++.+++++.+++
T Consensus 244 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 324 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999999999865446899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 404 ~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 404 LAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999998877789999999999999999999999999999998764
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-102 Score=833.98 Aligned_cols=470 Identities=23% Similarity=0.353 Sum_probs=439.6
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHh-H
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH-K 110 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~-~ 110 (509)
..++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|+++ +
T Consensus 63 ~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 140 (563)
T 4e3x_A 63 AIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR 140 (563)
T ss_dssp ECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTH
T ss_pred cCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccH
Confidence 4568999999985 44778999998 899999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHcCCCHHHHhhH-HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|+.++++|+|||..+++.| +..+++++++++..+.++.+.......++...+.++.|+|||++|+|||||+....++
T Consensus 141 ~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~ 220 (563)
T 4e3x_A 141 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLA 220 (563)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHH
Confidence 999999999999999999887 9999999999999998877653222222344567777889999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
++||| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 221 ~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa 299 (563)
T 4e3x_A 221 GAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVA 299 (563)
T ss_dssp HHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999 59999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cCCC------eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCC
Q 010482 270 GTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 343 (509)
Q Consensus 270 ~~~~------~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~ 343 (509)
++++ |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 300 ~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGd 379 (563)
T 4e3x_A 300 QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGD 379 (563)
T ss_dssp HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCC
Confidence 8887 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC
Q 010482 344 G-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 421 (509)
Q Consensus 344 p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~ 421 (509)
| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 380 p~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 459 (563)
T 4e3x_A 380 PAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYP 459 (563)
T ss_dssp TTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEEC
T ss_pred cccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEEC
Confidence 9 9999999999999999999999999996 8999999998764568999999999999999999999999999999999
Q ss_pred C--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHH
Q 010482 422 T--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMD 493 (509)
Q Consensus 422 ~--~~eai~l~-n~~~~gl~asv~t~d~~~~~~~~~~l~--~G~v~iN~~~~--~~~~~pfGG~k~SG~G-~~~g~~~l~ 493 (509)
| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||++.. ..+.+||||+|.||+| +++|.++|+
T Consensus 460 d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~ 539 (563)
T 4e3x_A 460 DDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYIL 539 (563)
T ss_dssp GGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGG
T ss_pred CCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHH
Confidence 7 79999999 799999999999999999999999976 99999998754 3478999999999998 899999999
Q ss_pred hhheeeEEEEec
Q 010482 494 EFLEIKYVCLGD 505 (509)
Q Consensus 494 ~~~~~k~~~~~~ 505 (509)
+|++.|+|..+.
T Consensus 540 ~~~~~k~v~~~~ 551 (563)
T 4e3x_A 540 RWTSPQVIKETH 551 (563)
T ss_dssp GGBCCEEEEEEC
T ss_pred HhCceEEEEEeC
Confidence 999999998764
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-101 Score=815.78 Aligned_cols=461 Identities=30% Similarity=0.458 Sum_probs=435.9
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++ ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 6 ~~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999986 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++...+...+...+. ..+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP-LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE-ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999998887766654321 123456778999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+++|+.|++.++++++
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 242 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTT
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999 67899999999999999999999999999999999999
Q ss_pred eE-EeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHHhccccCC-CCCCCcc
Q 010482 274 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD-GFGEGVV 350 (509)
Q Consensus 274 ~~-~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v-~~~f~~~l~~~~~~~~~G~-p~~~~~~ 350 (509)
|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|++++
T Consensus 243 ~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~ 322 (490)
T 3ju8_A 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPF 322 (490)
T ss_dssp SEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCS
T ss_pred CcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCc
Confidence 98 8999999999999999999999999999999999999999999999996 9999999999999999999 9999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+||++++.+++++.+++++++++|+++++||.....+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++
T Consensus 323 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 401 (490)
T 3ju8_A 323 MGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREA 401 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999997654568999999999 99999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++||+.|+|++.
T Consensus 402 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 402 NATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred hcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 99999999999999999999999999999999998765 4578999999999985 58999999988775
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-101 Score=812.88 Aligned_cols=455 Identities=29% Similarity=0.430 Sum_probs=429.5
Q ss_pred CCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 010482 47 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 126 (509)
Q Consensus 47 ~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 126 (509)
+.++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhhccc-cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCC
Q 010482 127 EAVGEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 205 (509)
Q Consensus 127 ~a~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps 205 (509)
++..|++.+++.+++++..+.+..... .....++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 556799999999999988876654332 2233445667788999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCce
Q 010482 206 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 285 (509)
Q Consensus 206 ~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 285 (509)
+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~ 239 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPA 239 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCcc
Confidence 99999999999999999999999999999 56788899976 7899999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHH
Q 010482 286 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 365 (509)
Q Consensus 286 iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 365 (509)
||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+
T Consensus 240 iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 319 (474)
T 4h7n_A 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIND 319 (474)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHH
T ss_pred ccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC
Q 010482 366 FVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 444 (509)
Q Consensus 366 ~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~ 444 (509)
++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 320 ~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 399 (474)
T 4h7n_A 320 HILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAG 399 (474)
T ss_dssp HHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeC
Confidence 99999999999999998754 56899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEEec
Q 010482 445 NLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+++.
T Consensus 400 d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 400 SEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp SHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEEC
T ss_pred CHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECC
Confidence 999999999999999999998765 3478999999999998 789999999999999999873
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-100 Score=856.08 Aligned_cols=470 Identities=30% Similarity=0.458 Sum_probs=446.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 532 ~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~e 609 (1026)
T 4f9i_A 532 YPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFE 609 (1026)
T ss_dssp ECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997 468999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..++++++||+..++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 610 La~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ 689 (1026)
T 4f9i_A 610 LSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASA 689 (1026)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876654333235667889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh---
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA--- 269 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~--- 269 (509)
||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|.+.++
T Consensus 690 ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~ 769 (1026)
T 4f9i_A 690 AIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769 (1026)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCC
T ss_pred HHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred ---cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 270 ---GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 270 ---~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
.+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.|
T Consensus 770 ~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d 849 (1026)
T 4f9i_A 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSED 849 (1026)
T ss_dssp TTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred ccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+++++||++++.+++++.++|++++++| ++++||..++..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 850 ~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deA 928 (1026)
T 4f9i_A 850 PANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQA 928 (1026)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHH
T ss_pred ccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999765434899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhheeeEEEE
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~-~~g~~~l~~~~~~k~~~~ 503 (509)
|+++|+++|||+++|||+|.+.++++++++++|+||||+.... .+.+||||+|.||+|+ ++|++++++|++.|+|++
T Consensus 929 I~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~ 1008 (1026)
T 4f9i_A 929 IEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTE 1008 (1026)
T ss_dssp HHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEE
T ss_pred HHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEE
Confidence 9999999999999999999999999999999999999987653 4789999999999994 699999999999999988
Q ss_pred ecc
Q 010482 504 GDM 506 (509)
Q Consensus 504 ~~~ 506 (509)
+..
T Consensus 1009 ~~~ 1011 (1026)
T 4f9i_A 1009 NTM 1011 (1026)
T ss_dssp ECC
T ss_pred ecc
Confidence 754
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-99 Score=811.94 Aligned_cols=464 Identities=22% Similarity=0.325 Sum_probs=425.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHh-hHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|.++|.++|+++++.|++++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997643 579999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhc-------cccCCCCCCc-eeEEEeecc-eEEEEEcCCChhH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-------EIIPATLPDR-RLFVLKQPV-GVAGAITPWNFPL 183 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~ 183 (509)
|++++++|+|||+.+++.|+..+++.+++|+..++++.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999998876643 2112211222 457889997 9999999999999
Q ss_pred HHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC-CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHH
Q 010482 184 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 262 (509)
Q Consensus 184 ~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 262 (509)
.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.++++.| +++++|+||||+++|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 79999999999665544433 5789999999999999
Q ss_pred HHHHHhh--cCCCeEEeecCCCCceEEcCCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 010482 263 KLMAGAA--GTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335 (509)
Q Consensus 263 ~i~~~~~--~~~~~~~lelgG~~~~iV~~da-----Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~ 335 (509)
.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 243 ~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 322 (534)
T 2y53_A 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAK 322 (534)
T ss_dssp HHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHH
Confidence 9998875 8899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc-----C-CCCceeecEEEecCCCC--Ccccc
Q 010482 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE--MLVSR 407 (509)
Q Consensus 336 ~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-----~-~~g~~~~Ptvl~~~~~~--~~~~~ 407 (509)
++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... + ..|+|++|||+.+++++ |++++
T Consensus 323 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~ 401 (534)
T 2y53_A 323 LAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHD 401 (534)
T ss_dssp HTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTT
T ss_pred HHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHh
Confidence 99999999999999999999999999999999999 6899999999742 1 24799999999999987 68999
Q ss_pred cccccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCC---------
Q 010482 408 EEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI--------- 468 (509)
Q Consensus 408 eE~fgPv~~v~~~~---~~-----~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l--~~G~v~iN~~~~--------- 468 (509)
||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||++..
T Consensus 402 eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~ 481 (534)
T 2y53_A 402 VEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN 481 (534)
T ss_dssp CCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSC
T ss_pred CCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCC
Confidence 99999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred CCCCCCccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 010482 469 STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 469 ~~~~~pfGG~k~SG~G~~-~g~~~l~~~~~~k~~~~ 503 (509)
..+.+||||+|+||+|++ +|.+++++|++.|++..
T Consensus 482 ~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 482 VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred CCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 357899999999999999 79999999999999865
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-97 Score=781.50 Aligned_cols=443 Identities=26% Similarity=0.393 Sum_probs=401.6
Q ss_pred CeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 010482 49 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 128 (509)
Q Consensus 49 ~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 128 (509)
..+++.||.||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hHHHHHHHHHHHHHHHHHhhhccc-cCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecC
Q 010482 129 V-GEVDYGAKFIEFYAEEAKRVYGEI-IPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 204 (509)
Q Consensus 129 ~-~ev~~~~~~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkp 204 (509)
+ .|+..+++.+++++...++..+.. .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 599999999999998887654321 111 123456889999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCc
Q 010482 205 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 284 (509)
Q Consensus 205 s~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~ 284 (509)
|+.+|+++..|++++.++ +|+|++|+|+| +.+.++.|++ ++|++|+||||+++|+.|++.++++++|+++|||||||
T Consensus 166 s~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p 242 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCP 242 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEE
T ss_pred CCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCC
Confidence 999999999999999999 99999999999 6788999998 78999999999999999999999999999999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHH
Q 010482 285 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 364 (509)
Q Consensus 285 ~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~ 364 (509)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++++.
T Consensus 243 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~ 317 (457)
T 3lns_A 243 LIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLV 317 (457)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHH
T ss_pred CeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 7776 999999999999999
Q ss_pred HHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc-CCCCcEEEEEc
Q 010482 365 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND-TNAGLAAYIFT 443 (509)
Q Consensus 365 ~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~-~~~gl~asv~t 443 (509)
++++++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||
T Consensus 318 ~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t 393 (457)
T 3lns_A 318 SLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFG 393 (457)
T ss_dssp HHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEEC
T ss_pred HHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEEC
Confidence 999985 36999999764 35799999999999999999999999999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 444 NNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 444 ~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 394 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 394 KDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp SCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 9999999999999999999999754 46899999999999999999999999999999976
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-95 Score=770.37 Aligned_cols=428 Identities=29% Similarity=0.444 Sum_probs=396.4
Q ss_pred CCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHH
Q 010482 68 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 146 (509)
Q Consensus 68 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 146 (509)
.+.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++..+++++...
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999999999999999999999997 59999999888887766
Q ss_pred HhhhccccC---CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC
Q 010482 147 KRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 223 (509)
Q Consensus 147 ~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG 223 (509)
......... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 544322111 1112456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHH
Q 010482 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 303 (509)
Q Consensus 224 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~ 303 (509)
+|+|++|+|+|+ .+.+..|+.| +|++|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.++++
T Consensus 174 lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 174 LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 999999999994 4556678877 79999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Q 010482 304 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383 (509)
Q Consensus 304 ~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 383 (509)
+|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||++++.+++++.+++ +|+++++||..
T Consensus 252 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTG 325 (469)
T ss_dssp HHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCE
T ss_pred HHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCcc
Confidence 999999999999999999999999999999999998 699999999999999999999999998 69999999987
Q ss_pred cCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEE
Q 010482 384 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 463 (509)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~i 463 (509)
+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|||
T Consensus 326 ~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~v 404 (469)
T 3sza_A 326 D-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAA 404 (469)
T ss_dssp E-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred C-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 5 357999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 464 NEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 464 N~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 405 N~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 405 NDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp SCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred eCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 99763 4689999999999999999999999999999998863
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-95 Score=775.38 Aligned_cols=451 Identities=25% Similarity=0.325 Sum_probs=414.2
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEE-EEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+. . ++||+||++++ +++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 30 ~~~~I~G~~~~~~--~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (528)
T 3v4c_A 30 GKHLVAGEWLDGA--G---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEA 104 (528)
T ss_dssp CCEEETTEEECCS--S---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCceECCEEecCC--C---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4689999999853 2 99999999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhh--hcccc----CCC--CCCceeEEEeecceEEEEEcCCChhHH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV--YGEII----PAT--LPDRRLFVLKQPVGVAGAITPWNFPLA 184 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~ 184 (509)
|++++++|+|||+.+++.|+..+++.++||+...++. .+... +.. .++...++.++|+|||++|+|||||+.
T Consensus 105 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 184 (528)
T 3v4c_A 105 ITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLA 184 (528)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHH
Confidence 9999999999999999999999999999999988762 22211 111 123457899999999999999999999
Q ss_pred HHH--HhhhhHhhCCCEEEecCCCCCHHHHHHHHHHH----HHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCH
Q 010482 185 MIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258 (509)
Q Consensus 185 ~~~--~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~ 258 (509)
+.+ +++++||++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|++.+++++|++||+|++|+||||+
T Consensus 185 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~ 264 (528)
T 3v4c_A 185 FSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSL 264 (528)
T ss_dssp TSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCH
T ss_pred HhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCh
Confidence 865 89999999999999999999999999998865 578999999999999888899999999999999999999
Q ss_pred HHHHHHHHHhhcCC--CeEEeecCCCCceEEcCCC---CHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHH
Q 010482 259 AVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAF 332 (509)
Q Consensus 259 ~~g~~i~~~~~~~~--~~~~lelgG~~~~iV~~da---Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l 332 (509)
++|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||+|+++|
T Consensus 265 ~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l 344 (528)
T 3v4c_A 265 AGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAA 344 (528)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHH
Confidence 99999999999998 9999999999999999999 88999999999999999999999999999997 999999999
Q ss_pred HHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCC---Ccccccc
Q 010482 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREE 409 (509)
Q Consensus 333 ~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~eE 409 (509)
+++++++++| +.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |++++||
T Consensus 345 ~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eE 412 (528)
T 3v4c_A 345 VEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEE 412 (528)
T ss_dssp HHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCC
T ss_pred HHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhccc
Confidence 9999998653 67899999888888887764 489999999975 4799999999988887 8999999
Q ss_pred cccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC--CHHHHHHHHhhcc--ceEEEECCCCC---CCCCCCccC-CCCC
Q 010482 410 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFGG-VKQS 481 (509)
Q Consensus 410 ~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~--d~~~~~~~~~~l~--~G~v~iN~~~~---~~~~~pfGG-~k~S 481 (509)
+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||+++. ..+.+|||| +|.|
T Consensus 413 iFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~S 492 (528)
T 3v4c_A 413 VFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPAS 492 (528)
T ss_dssp CSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTB
T ss_pred ccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999 8999999999998 99999999654 357899999 9999
Q ss_pred CCCCCC--hHHHHHhhheeeEE
Q 010482 482 GLGREG--SKYGMDEFLEIKYV 501 (509)
Q Consensus 482 G~G~~~--g~~~l~~~~~~k~~ 501 (509)
|+|+++ |.+|+++||+.|++
T Consensus 493 g~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 493 TNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp SCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCcHHHHHHhchhHHh
Confidence 999985 99999999999864
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-92 Score=755.42 Aligned_cols=444 Identities=20% Similarity=0.253 Sum_probs=407.0
Q ss_pred CCCCCeEEeecCCCCCEE-EEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010482 45 AYDGKTLEVHNPATGEVI-ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK 123 (509)
Q Consensus 45 ~~~~~~~~~~~p~~g~~i-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk 123 (509)
+.++++++++||+||+++ ++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhHHHHHHHHHHHHHHHHHh--hhcccc----CCCCC-C-ceeEEEeecceEEEEEcCCChhHHHH--HHhhhhH
Q 010482 124 PLKEAVGEVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITPWNFPLAMI--TRKVGPA 193 (509)
Q Consensus 124 ~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~A 193 (509)
|+.+++.|+..+++.++||+...++ ..+... +...+ + ...++.++|+|||++|+|||||+... .+++++|
T Consensus 83 ~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~A 162 (510)
T 1ez0_A 83 PEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 162 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHH
Confidence 9999999999999999999998875 322221 11111 1 23678999999999999999999985 4999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHH----HHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
|++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|.+.++++.|++||+|++|+||||+.+|+.|++.++
T Consensus 163 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 242 (510)
T 1ez0_A 163 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 242 (510)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh
Confidence 99999999999999999999999987 56899999999999977889999999999999999999999999999999
Q ss_pred cCC--CeEEeecCCCCceEEcCCCCHH--HHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHHhccccCCC
Q 010482 270 GTV--KKVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDG 344 (509)
Q Consensus 270 ~~~--~~~~lelgG~~~~iV~~daDl~--~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p 344 (509)
+++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 243 ~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~--- 319 (510)
T 1ez0_A 243 ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP--- 319 (510)
T ss_dssp HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---
T ss_pred ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---
Confidence 886 9999999999999999999999 99999999999999999999999999999 999999999999999874
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCCCCceeecEEEecCCCC---CcccccccccceEEEEEe
Q 010482 345 FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREEVFGPVAPLLCF 420 (509)
Q Consensus 345 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~eE~fgPv~~v~~~ 420 (509)
||++++.+.+++.++++++++ +|+++++||. . |+|++|||+.+++++ |++++||+||||++|++|
T Consensus 320 -------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~ 388 (510)
T 1ez0_A 320 -------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 388 (510)
T ss_dssp -------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred -------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEe
Confidence 688899999999999999984 8999999997 2 799999999988777 999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCH--HHHHHHHhhc--cceEEEECCCCC---CCCCCCccC-CCCCCCCCC--ChHH
Q 010482 421 KTEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFGG-VKQSGLGRE--GSKY 490 (509)
Q Consensus 421 ~~~~eai~l~n~~~~gl~asv~t~d~--~~~~~~~~~l--~~G~v~iN~~~~---~~~~~pfGG-~k~SG~G~~--~g~~ 490 (509)
+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+||||++.. ..+.+|||| +|.||+|+. +|.+
T Consensus 389 ~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 389 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 99999999999999999999999987 7999999999 799999998764 357899999 799999854 8999
Q ss_pred HHHhhheeeEEE
Q 010482 491 GMDEFLEIKYVC 502 (509)
Q Consensus 491 ~l~~~~~~k~~~ 502 (509)
|+++|++.|++.
T Consensus 469 gl~~~~~~k~~~ 480 (510)
T 1ez0_A 469 AIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhheEEEEc
Confidence 999999998753
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-91 Score=783.67 Aligned_cols=436 Identities=26% Similarity=0.415 Sum_probs=411.2
Q ss_pred EcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHH
Q 010482 65 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 144 (509)
Q Consensus 65 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 144 (509)
++.++.+|++.|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.++..|+..+++.++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCC-CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC
Q 010482 145 EAKRVYGEIIPA-TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 223 (509)
Q Consensus 145 ~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG 223 (509)
..++..+..... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG 703 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG 703 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence 998876643221 2235678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC---CCeEEeecCCCCceEEcCCCCHHHHHHHH
Q 010482 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGA 300 (509)
Q Consensus 224 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~a~~~i 300 (509)
+|+|++|+|+|++.+ ++.|+.||+|++|+||||+++|+.|++.++++ ++|+++|+|||||+||++|||++.|++.+
T Consensus 704 lP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 704 IPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp CCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred cCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 999999999998777 99999999999999999999999999998864 89999999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeC
Q 010482 301 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 380 (509)
Q Consensus 301 ~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~g 380 (509)
++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++ +|
T Consensus 783 v~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~g 860 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HF 860 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EE
T ss_pred HHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888 88 88
Q ss_pred CcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccc
Q 010482 381 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 458 (509)
Q Consensus 381 g~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~--~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~ 458 (509)
|..+ .+|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++++++
T Consensus 861 g~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~a 937 (1001)
T 3haz_A 861 AGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV 937 (1001)
T ss_dssp ECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCC
T ss_pred cccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence 8765 3589999999985 6889999999999999999996 799999999999999999999999999999999999
Q ss_pred eEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEEecc
Q 010482 459 GLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 459 G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
|+||||++... .+.+||||+|.||+| +++|++++++|++.|+|+++..
T Consensus 938 G~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp SEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred eeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 99999997653 367899999999999 5799999999999999998643
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-85 Score=690.13 Aligned_cols=405 Identities=16% Similarity=0.141 Sum_probs=338.2
Q ss_pred EeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCC
Q 010482 52 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ-------GKP 124 (509)
Q Consensus 52 ~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 124 (509)
-++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHhhHHHHHHHHHHHHHHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCC
Q 010482 125 LK----EAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 198 (509)
Q Consensus 125 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 198 (509)
+. +++.|+..+++.+++++..+++..+...+.. .++...++.++|+|||++|+||| |.... +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 98 4678999999999999988777666543221 13445789999999999999776 76666 89999999999
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 199 TVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 199 ~vVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ +||
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~p 243 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIP 243 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSC
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCC
Confidence 999999999999999999999999 9 9999999999 6788999999999999999999999999999887 899
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 244 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~ 297 (463)
T 2h5g_A 244 VMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL 297 (463)
T ss_dssp BCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH
T ss_pred EEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH
Confidence 999999999999999999999999999999999 999999999999999998 343
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCC
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 434 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~ 434 (509)
++ +++++++++|++++.|+... ..++|+ +++|++++||+||||++|++|+|+||||+++|+++
T Consensus 298 -----~~---~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~ 360 (463)
T 2h5g_A 298 -----FD---QIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYG 360 (463)
T ss_dssp -----HH---HHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHC
T ss_pred -----HH---HHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCC
Confidence 23 35788888999998555432 234443 57899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCC--CC--ChHHHHHhhheeeEEEEec
Q 010482 435 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE--GSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 435 ~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G--~~--~g~~~l~~~~~~k~~~~~~ 505 (509)
|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+| ++ +|.+|+++||+.|+|.++.
T Consensus 361 ~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 361 SSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999998777789999999999999 75 9999999999999998763
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-83 Score=671.95 Aligned_cols=395 Identities=19% Similarity=0.183 Sum_probs=326.9
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh-hHHHH-HHHHHHHHHHH
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV-GEVDY-GAKFIEFYAEE 145 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 145 (509)
.+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..+++++..
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999999999999998 8885 78988 88999999988
Q ss_pred HHhhh------ccccCCC-C-CCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHH
Q 010482 146 AKRVY------GEIIPAT-L-PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 217 (509)
Q Consensus 146 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~ 217 (509)
.+... +...+.. . .+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 87765 3322211 1 2345689999999999999999 9 8999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 218 LAL----Q----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 218 ~l~----~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
++. + +|+|+|++|+|+ ++.++++.|+.||+|++|+||||+++|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 6668899999999999999999999999999877 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCCcccCcccCHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 88743 344
Q ss_pred -HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCC
Q 010482 367 -VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445 (509)
Q Consensus 367 -i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d 445 (509)
+++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 310 ~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 376 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 376 (468)
T ss_dssp HHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred cccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 56654 3666775 3 689987 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCCCCCCCCcc-----CCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 446 LQRTWRVSEALEYGLVGVNEGLISTEVAPFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfG-----G~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
.++++++++++++|+||||++....+.+||| |+|.||+|++ |.+|+++|++.|+|.++.
T Consensus 377 ~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 377 KANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp HHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999987777889999 9999999999 999999999999998763
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-82 Score=665.79 Aligned_cols=417 Identities=18% Similarity=0.248 Sum_probs=370.5
Q ss_pred EEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHH
Q 010482 64 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 142 (509)
Q Consensus 64 ~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 142 (509)
+++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 3456678999999999999999999999999999999999999999999999999999999988854 334444444333
Q ss_pred HHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHH----HH
Q 010482 143 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA----EL 218 (509)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~----~~ 218 (509)
.... +..+.. . ..++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ ++
T Consensus 85 ~~~~-~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDM-KTIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTC-CCSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhcc-ccccee-c-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 2211 111211 1 123566789999999999999999999999999999999999999999999999998755 55
Q ss_pred HHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEEcCCCCHHHHH
Q 010482 219 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAV 297 (509)
Q Consensus 219 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV~~daDl~~a~ 297 (509)
+.++|+|+|++|+|+|++.+.++.|++||+|++|+||||+.+ .+.+++++||+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 789999999999999988899999999999999999999984 55667788998 8888 99999999999999999
Q ss_pred HHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHH-------hccccCCCC-CCCcccCcccCHHHHHHHHHHHHH
Q 010482 298 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV-------KNLKVGDGF-GEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 298 ~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
+.+++|+|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999986 467899998 788999999999999999999998
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEEcCC
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI----HMANDTNAGLAAYIFTNN 445 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai----~l~n~~~~gl~asv~t~d 445 (509)
++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|
T Consensus 317 a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d 381 (464)
T 3k9d_A 317 TVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSED 381 (464)
T ss_dssp CCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSC
T ss_pred hhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 88899999998853 467788865 89999999999999999997 799999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 446 LQRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~---------~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
.+++++|++++++|+||||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|...
T Consensus 382 ~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 382 KEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp HHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred HHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999764 468899998 77899999999999999999999764
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-80 Score=648.60 Aligned_cols=388 Identities=21% Similarity=0.228 Sum_probs=346.2
Q ss_pred HHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh--------hHHHHHHH
Q 010482 70 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV--------GEVDYGAK 137 (509)
Q Consensus 70 ~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 137 (509)
-+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999986 5553 68999999
Q ss_pred HHHHHHHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHH
Q 010482 138 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215 (509)
Q Consensus 138 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l 215 (509)
.+++|+.+.+. .+...+.. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 33322211 12345688999999999999986 4 68889999999999999999999999999999
Q ss_pred HHHHH----HcCCCCccEEeecCC-chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 216 AELAL----QAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 216 ~~~l~----~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++++. ++|+|+|++|+|+|. ..++++.|..||+|++|+||||+++|+.|++.+ .+|+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99998 789999999999984 456888999999999999999999999999887 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a 370 (509)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999988652
Q ss_pred HHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 371 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 371 ~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 298 -------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 -------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp -------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred -------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233321 12 33 885 3467899999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCCccCCCCCCCC----CCChHHHHHhhheeeEEEEecc
Q 010482 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
++++++++|+||||++....+.+||||.|+||+| +++|.+|+++||+.|+|.+++.
T Consensus 364 ~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 9999999999999987766788999999999997 4689999999999999988753
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-80 Score=649.17 Aligned_cols=389 Identities=20% Similarity=0.203 Sum_probs=335.6
Q ss_pred HHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHh--------hHHHHHHH
Q 010482 70 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAK 137 (509)
Q Consensus 70 ~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~ 137 (509)
.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 554 37899999
Q ss_pred HHHHHHHHHHhhhccccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHH
Q 010482 138 FIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215 (509)
Q Consensus 138 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l 215 (509)
.+++++.+.+. .+...+. ...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999887643 2333222 123456789999999999999999 8 58889999999999999999999999999999
Q ss_pred HHHH----HHcCCCCccEEeecCCch-hhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 216 AELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 216 ~~~l----~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++++ .++|+|+|++|+|+|.+. ++++.|..||+|+.|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9996 799999999999998655 5788888999999999999999999998876 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |||.+ .+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHH
Confidence 9999999999999999999 9999999999999999999999999999988 76532 3455
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
+++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 321 ~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 377 (444)
T 4ghk_A 321 EAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHD 377 (444)
T ss_dssp HHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHH
T ss_pred Hhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 5432 1 1 11 3567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++++++|+|+||++....+.+||||.|+||+| +++|.+|+++||+.|+|+++.
T Consensus 378 ~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 378 RAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999998777788999999999998 689999999999999998864
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-77 Score=628.76 Aligned_cols=410 Identities=19% Similarity=0.238 Sum_probs=345.6
Q ss_pred EcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHH-HHH
Q 010482 65 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFI-EFY 142 (509)
Q Consensus 65 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 142 (509)
++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. ++..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999985 777777766 343
Q ss_pred HHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHH--
Q 010482 143 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 220 (509)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~-- 220 (509)
+. .+..+.. + ..++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGIL-E-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEEC---------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--ccccccc-c-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 32 1122211 1 1233456889999999999999999999999999999999999999999999999998887765
Q ss_pred --HcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHH
Q 010482 221 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVN 298 (509)
Q Consensus 221 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~ 298 (509)
++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+++ .++.++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 799999999999998889999999999999999999998654 45678899999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEE
Q 010482 299 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378 (509)
Q Consensus 299 ~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~ 378 (509)
.+++|+|+|+||.|++++|||||+++||+|+++|+++ +||++++++++++.++++++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999885 389999999999999998766667776
Q ss_pred eCCcccC---CCCceeecEE-------EecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEEcC
Q 010482 379 LGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN----AGLAAYIFTN 444 (509)
Q Consensus 379 ~gg~~~~---~~g~~~~Ptv-------l~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~----~gl~asv~t~ 444 (509)
+||.... ..|+|++||+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 4765421 2479999997 678999999876 89999999999999999999999985 9999999999
Q ss_pred CHHHHHH---HHhhccceEEEECCCCCCCCCCCccCCCC----------------CCCCCCChHHHHHhhheeeEEEEec
Q 010482 445 NLQRTWR---VSEALEYGLVGVNEGLISTEVAPFGGVKQ----------------SGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 445 d~~~~~~---~~~~l~~G~v~iN~~~~~~~~~pfGG~k~----------------SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|.+++++ +++++++|+|+||+++. |||.+. -|.+...+.-+.+++.+.|+|....
T Consensus 376 d~~~a~~i~~~a~~l~~G~V~VN~~~~------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 376 QDVNADRIRYFGDKMKTARILINIPTT------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp TTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------------CCCCCGGGGEEEEEEECCC
T ss_pred CHHHHHHHHHHHHhCCEEEEEECCCCC------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeec
Confidence 9888777 99999999999998653 443332 2222334456788888988886543
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.024 Score=57.07 Aligned_cols=327 Identities=16% Similarity=0.161 Sum_probs=176.8
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-C------HHHH---------------hhHHHHHHHHHHHHH
Q 010482 86 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK-P------LKEA---------------VGEVDYGAKFIEFYA 143 (509)
Q Consensus 86 ~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk-~------~~~a---------------~~ev~~~~~~l~~~~ 143 (509)
.|+..+..+-.+....+.+.++++.|+-....++...+ . +.-. +..++.+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 35555555556666666666776666544444443221 0 1011 123344444455444
Q ss_pred HHHHhhhccccCCCCCCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCE--EEecCCCCCHHHHHHHHHH
Q 010482 144 EEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAEL 218 (509)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--vVlkps~~~p~~~~~l~~~ 218 (509)
..... ........+|.....++.|+--|++..|. .||-..++ ..+||-.+|.. |+.-|++... ..-.+.-+
T Consensus 106 ~~Q~~--~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~~G~-i~p~iL~A 181 (423)
T 4gic_A 106 ERQKL--DSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLM-NAVPAKVAGVPELIMAVPAPRGE-LNALVLAA 181 (423)
T ss_dssp HHHCC--CCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHH-HHHHHHHHTCSEEEEECCCGGGC-CCHHHHHH
T ss_pred Hhccc--CCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHH-hhccHHHhCCCeEEEecCCCCCC-ccHHHHHH
Confidence 32211 11111224566777899999999999995 47654444 57899999986 3445543211 11122233
Q ss_pred HHHcCCCCccEEeecCCchhhhhhhhc----CCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCC
Q 010482 219 ALQAGIPPGVVNVVMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDA 291 (509)
Q Consensus 219 l~~aGlP~gvv~~v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~da 291 (509)
.+.+|+-+ +..-.|.+.-.+|.- -|.||+|+=.|..=+..+=.... ..+-..+- |.+=++| ++.+
T Consensus 182 A~l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a 253 (423)
T 4gic_A 182 AYISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRT 253 (423)
T ss_dssp HHHHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCS
T ss_pred HHhcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCC
Confidence 45667653 333225554445543 67899999888876544322222 22444443 5555444 4458
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehh--hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~--v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|.+.++..++.-+=... ..+.++|..+ ..++..+.+.+.++.+. .+ +. +..
T Consensus 254 ~p~~vAaDLlsQAEHd~-----~a~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r~---~i----~~~ 306 (423)
T 4gic_A 254 DPDWIAMDLFSQAEHDE-----DAQAILISPDAAHLEAVQASIERLLPGME---------------RA---EV----IRT 306 (423)
T ss_dssp CHHHHHHHHHHHHTTCT-----TCEEEEEESCHHHHHHHHHHHHHHGGGCT---------------TH---HH----HHH
T ss_pred CHHHHHHHHHHhhccCC-----CCeEEEEeCcHHHHHHHHHHHHHHHhhCc---------------cH---HH----HHH
Confidence 99998888776654432 2345666554 33444444444443331 11 11 111
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~ 449 (509)
+.. -+| .++.++|.+|+++++|..-- =..-|.++|+.
T Consensus 307 sl~-------------------------------------~~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~-- 343 (423)
T 4gic_A 307 SLE-------------------------------------RRG---GMILVDDLEQAAAVANRIAP-EHLELSVESPE-- 343 (423)
T ss_dssp HHH-------------------------------------HHC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH--
T ss_pred HHh-------------------------------------cCc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH--
Confidence 111 011 35567999999999998533 26678889875
Q ss_pred HHHHhhcc-ceEEEECCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 450 WRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 450 ~~~~~~l~-~G~v~iN~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
.+..+++ +|.|++..++.. ++.+|-+ |+.|..+.-+++.|++.-+
T Consensus 344 -~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 344 -VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSS 398 (423)
T ss_dssp -HHGGGCCCCSEEEEC----------------CCCCT-----TGGGTCCCCCGGGGEEEEE
T ss_pred -HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeee
Confidence 4777777 999999865431 2345544 4556655567888877543
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.14 Score=51.57 Aligned_cols=282 Identities=19% Similarity=0.228 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCEEE--ecCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVV--VKPS 205 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~vV--lkps 205 (509)
.++.+.+.++.|...... ........+|...-.++.|+--|++..|. -||-..+ ....||-.+|..=| +-|+
T Consensus 87 ai~~A~~nI~~fH~~Q~~--~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvL-M~aiPAkVAGV~~Iv~~tPp 163 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL--PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPP 163 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC--CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHH-HHHHHHHHHTCSEEEEEECS
T ss_pred HHHHHHHHHHHHHHHhcC--CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHH-HhhccHhhcCCCeEEEECCC
Confidence 445556666655432211 11011122355666789999999999996 5665444 45789999998644 4454
Q ss_pred CCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-
Q 010482 206 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 280 (509)
Q Consensus 206 ~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg- 280 (509)
...|.+ .-+.+.+|+.+ +.-+ | |.+.-.+|. .-|.||+|+=.|..=+..+=..... ....+-..+-
T Consensus 164 ~i~p~i----L~AA~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~VgIDm~A 234 (434)
T 1kae_A 164 PIADEI----LYAAQLCGVQD--VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPA 234 (434)
T ss_dssp SCCHHH----HHHHHHTTCCE--EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTSCEESCCC
T ss_pred CCCHHH----HHHHHHcCCCE--Eeec-c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCccccCCCC
Confidence 333322 23345667653 2222 3 444444443 3588999998887654333222111 1233444443
Q ss_pred CCCceEE--cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh--hHHHHHHHHHHHHhccccCCCCCCCcccCcccC
Q 010482 281 GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 356 (509)
Q Consensus 281 G~~~~iV--~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~--v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~ 356 (509)
|.+=++| +++||.+..+..++.-+=... ..+.++|..+ ..++..+.+.+.+..+. .
T Consensus 235 GPSEilViAD~tAnp~~vAaDLLsQAEHd~-----~a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r 294 (434)
T 1kae_A 235 GPSEVLVIADSGATPDFVASDLLSQAEHGP-----DSQVILLTPAADMARRVAEAVERQLAELP---------------R 294 (434)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHTTCT-----TCEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHhccCC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h
Confidence 5555544 456899998888776654432 2345666544 33444444444433331 1
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCC
Q 010482 357 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 436 (509)
Q Consensus 357 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~g 436 (509)
. +.++.+. ..- .|+.++|.+||++++|..-.
T Consensus 295 ~-------~ia~~sl----------------------------------------~~~-~ii~v~~l~ea~~~~N~~AP- 325 (434)
T 1kae_A 295 A-------ETARQAL----------------------------------------NAS-RLIVTKDLAQCVEISNQYGP- 325 (434)
T ss_dssp H-------HHHHHHH----------------------------------------TTC-EEEECSSHHHHHHHHHHHCC-
T ss_pred H-------HHHHHHH----------------------------------------HcC-eEEEECCHHHHHHHHHHhhh-
Confidence 0 1112111 122 56678999999999998543
Q ss_pred cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 010482 437 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501 (509)
Q Consensus 437 l~asv~t~d~~~~~~~~~~l~-~G~v~iN~~~~---------~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~ 501 (509)
=..-|.++|+. .+..+++ +|.|++..++. .++.+|-+| +.|..+.-+++.|++.-++
T Consensus 326 EHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 326 EHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp SEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEE
T ss_pred HhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeE
Confidence 26778899975 4677777 99999997654 234566544 5566666678888875443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 509 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-169 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-168 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-160 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-144 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-121 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-115 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-104 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-103 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-59 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-58 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 8e-26 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 486 bits (1252), Expect = e-169
Identities = 187/472 (39%), Positives = 264/472 (55%), Gaps = 6/472 (1%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA---FDAFNSWSKLTAA 93
I +W + GK V NPAT E + V ++ A+ +A F + W + A+
Sbjct: 17 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 76
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGE 152
ER + L K DL+ + L + + GK + ++ K + + A A ++ G
Sbjct: 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 136
Query: 153 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212
IP + + +PVGV G I PWNFPL M K+GPAL+CG TVVVKP+E TPLTA
Sbjct: 137 TIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 195
Query: 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG-T 271
L L +AG PPGVVN+V G P G A+ + V K+ FTGST VGK + A
Sbjct: 196 LHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSN 255
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
+K+VSLELGG +PCIVF DADL+ AV A F + GQ C+ A+R+ V+E IY++F
Sbjct: 256 LKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRR 315
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ K +G+ GV QGP I+K EK+ +E +GAK+ GG F
Sbjct: 316 SVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFI 375
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
+PTV S+V +M +++EE+FGPV ++ FK+ ++ I AN+T GL+A IFTN++ +
Sbjct: 376 QPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAIT 435
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
VS AL+ G V VN + + PFGG K SG GRE +YG E+ E+K V +
Sbjct: 436 VSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 487
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 482 bits (1241), Expect = e-168
Identities = 186/487 (38%), Positives = 272/487 (55%), Gaps = 6/487 (1%)
Query: 22 LPSMQSYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA- 80
+P+ F Q I +W DA KT NP+TGEVI V+ ++ A+ +A
Sbjct: 2 VPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAAR 61
Query: 81 --FDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAK 137
F + W ++ A+ R + L + DL+ + L L TL+ GKP + ++D K
Sbjct: 62 AAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLK 121
Query: 138 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 197
+ +YA A + +G+ IP D + +PVGV G I PWNFPL M K+GPALA G
Sbjct: 122 CLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATG 180
Query: 198 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 257
VV+K +E TPLTAL A L +AG PPGVVN+V G P G A+ + V K+ FTGS
Sbjct: 181 NVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGS 240
Query: 258 TAVGKKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 316
T +G+ + A +K+V+LELGG +P I+ DAD++ AV A A F N GQ +
Sbjct: 241 TEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS 300
Query: 317 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 376
R VQE IY++F + K+ VG+ F QGP +++ +K+ ++ +GAK
Sbjct: 301 RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAK 360
Query: 377 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 436
+L GG + F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ G
Sbjct: 361 LLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYG 420
Query: 437 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 496
LAA +FT +L + +S+AL+ G V VN + +PFGG K SG GRE +YG+ +
Sbjct: 421 LAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYT 480
Query: 497 EIKYVCL 503
E+K V +
Sbjct: 481 EVKTVTV 487
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 461 bits (1188), Expect = e-160
Identities = 185/479 (38%), Positives = 261/479 (54%), Gaps = 11/479 (2%)
Query: 38 IGGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
GG+ I + DG T E V PATG V+ + G +E A+ SA A+ WSK+ ERS
Sbjct: 24 WGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERS 83
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 156
+ + + ++ ++ + +L + GK + EA ++D + IE+YA A + G+ I
Sbjct: 84 RVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL 143
Query: 157 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216
+ ++P+GV I WN+P + K PALACG VV KPS TP+T + A
Sbjct: 144 P-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 217 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 276
E+ +AG+P G+VNVV G + G L P V K++FTGS GKK+M +A TVK V+
Sbjct: 203 EIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVT 261
Query: 277 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 336
LELGG +P ++F D +L AV GAL A F GQ C RV VQ I +F + K
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRT 321
Query: 337 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------TF 390
K + VGD G LI+K L+KV FV A +GA+VL GG + F
Sbjct: 322 KAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYF 381
Query: 391 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450
P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT ++ R
Sbjct: 382 MSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAH 441
Query: 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDMN 507
RV+ LE G +N IS PFGG K SG GRE + +D + ++K V +GD++
Sbjct: 442 RVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 419 bits (1079), Expect = e-144
Identities = 169/471 (35%), Positives = 259/471 (54%), Gaps = 4/471 (0%)
Query: 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAA 93
+ LI G+ + +G+ V+NPATG+V+ ++ ++ A+ +A AF W + T
Sbjct: 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPK 61
Query: 94 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV-DYGAKFIEFYAEEAKRVYGE 152
R++ L K D++ + + +L + GKPL A + F+A A+ + G
Sbjct: 62 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 121
Query: 153 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212
L + + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPLTA
Sbjct: 122 AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 181
Query: 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
L AELA + P GVVN++ G +GD L P+VR ++ TGS A G+ +++ A ++
Sbjct: 182 LKLAELA-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI 240
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K+ +ELGG AP IVFDDAD+ V G + N+GQ C A R+ Q+GIY+ +
Sbjct: 241 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL 300
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFY 391
AV LK G E GPL + A LE+V VE+A + G KV+ GG + +Y
Sbjct: 301 GAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYY 360
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++ R R
Sbjct: 361 APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 420
Query: 452 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
VS L+YG VN + P GG K SG G++ S YG++++ +++V
Sbjct: 421 VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 362 bits (929), Expect = e-121
Identities = 156/472 (33%), Positives = 245/472 (51%), Gaps = 14/472 (2%)
Query: 37 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 96
+ G+W + ++++ PA+G + +V M +E +SA A +W L+ ER+
Sbjct: 7 YVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA 64
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI--- 153
L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE+
Sbjct: 65 AYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG 124
Query: 154 --IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 211
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP ++
Sbjct: 125 GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS 184
Query: 212 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271
L AE +AG+P GV N + G +IGD ++ V I FTGST +G+++ A
Sbjct: 185 GLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG-- 242
Query: 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 331
++ + LELGG IV +DADL + +A F SGQ C RVLV E + ++ +
Sbjct: 243 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 302
Query: 332 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 391
+ V L +G+ + PLI+ + + VE + DA KGA L +R
Sbjct: 303 IREKVLALTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREG---NLI 358
Query: 392 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R +
Sbjct: 359 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418
Query: 452 VSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502
++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 419 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 349 bits (895), Expect = e-115
Identities = 149/477 (31%), Positives = 228/477 (47%), Gaps = 15/477 (3%)
Query: 37 LIGGKWIDAYDGKTLEVHNP-ATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 95
IGG+W+D + + NP A EV+ + G E + A+ +A+ AF +W +R
Sbjct: 41 YIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDR 98
Query: 96 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EII 154
S+ L K L+ K EL + E GK EA +V FIE+YA A R +
Sbjct: 99 SRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVE 158
Query: 155 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 214
P P+G I PWNFP+A+ T + +A G TV+ KP+E +
Sbjct: 159 VVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218
Query: 215 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA------ 268
E+ +AG PPGVVN + G ++G L+ P++R I FTGS VG K+ A
Sbjct: 219 VFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPG 278
Query: 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
K+ +E GG IV + AD ++A G + + + GQ C A+R+++ +G YE
Sbjct: 279 QTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPV 338
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
+ K + L VG E GP+++ KV +++E ++G VL GG+R
Sbjct: 339 LERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEG 396
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448
F PTV + V + +++EE+FGPV ++ K EA+ +ANDT GL +++ +
Sbjct: 397 YFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456
Query: 449 TWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 502
G + N + V PFGG K SG + G+ + FLE+K V
Sbjct: 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 320 bits (820), Expect = e-104
Identities = 142/473 (30%), Positives = 231/473 (48%), Gaps = 12/473 (2%)
Query: 38 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERS 96
+ G+W + G+ +EV +P IA V +E + + F S + ER
Sbjct: 21 LAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL 78
Query: 97 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP- 155
LRK D++ + + +++ + GKP AVGEV + + K++ G+ IP
Sbjct: 79 AVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG 138
Query: 156 ---ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 212
+ V ++P+GV AITP+N+PL K+ + G VVVKPS PL A
Sbjct: 139 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 198
Query: 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
A + L AG P ++ + ++ +V ++FTGST VG++++ V
Sbjct: 199 AMAVKALLDAG-FPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--V 255
Query: 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 332
K+ +ELGG P IV +DADL++A + + +GQ C VL + +Y K +
Sbjct: 256 KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 315
Query: 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 392
+K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGRR
Sbjct: 316 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPT 375
Query: 393 P-TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 451
++ +M++ + EVF PVA + K ++AI +AN GL A +F ++ + R
Sbjct: 376 LVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRR 435
Query: 452 VSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503
LE G + +N+ PFGG K+SG+ REG Y ++ K +
Sbjct: 436 AVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 488
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 315 bits (807), Expect = e-103
Identities = 116/435 (26%), Positives = 195/435 (44%), Gaps = 16/435 (3%)
Query: 75 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVD 133
D + A +AFNS + R + L ++ + + + + + GK + EV
Sbjct: 4 DTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVA 63
Query: 134 YGAKFIEFYAEEAKRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190
+ + ++ +E + L++ +P+GV I WN+P + + +
Sbjct: 64 HVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPM 123
Query: 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 250
A+A G V++KPSE + A A ++ L +
Sbjct: 124 VGAVAAGNAVILKPSEVSGHMADLLAT---LIPQYMDQNLYLVVKGGVPETTELLKERFD 180
Query: 251 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 310
I +TGSTAVGK +MA AA + V+LELGG +PC V D DL+VA KF NSGQ
Sbjct: 181 HIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQ 240
Query: 311 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370
TCV + +L I + + K++K+ G+ + G +IN ++V+ +++
Sbjct: 241 TCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN- 298
Query: 371 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430
+ + G + PT+L +V + V +EE+FGPV P++C ++ EEAI
Sbjct: 299 -----QKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFI 353
Query: 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGREGS 488
N LA Y+F+NN + ++ G V N+ ++ V PFGGV SG+G
Sbjct: 354 NQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHG 413
Query: 489 KYGMDEFLEIKYVCL 503
K + F + +
Sbjct: 414 KKSFETFSHRRSCLV 428
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 202 bits (514), Expect = 2e-59
Identities = 86/479 (17%), Positives = 158/479 (32%), Gaps = 40/479 (8%)
Query: 48 GKTLEVHNPATGEVIAN-VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLL 106
N TGE + E A ++A + +L ++R+ LR L
Sbjct: 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASEL 61
Query: 107 MAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP--------ATL 158
A +++ LE P GE+ A + +A+ A L
Sbjct: 62 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL 121
Query: 159 PDRRLFVLKQPVGVAGAITPWNFPL--AMITRKVGPALACGCTVVVKPSEFTPLT----A 212
P + + +G NFPL + ALA GC V+VK P T A
Sbjct: 122 PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVA 181
Query: 213 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272
+ Q +P + ++ GN +G AL++ P+++ + FTGS G+ L A
Sbjct: 182 ECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241
Query: 273 KKVSL--ELGGNAPCIVFDDADLNVA--VNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 328
+ + ELG P +F A A + +A+ GQ C V +
Sbjct: 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 301
Query: 329 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388
++++ + ++ ++ + ++ S + S +
Sbjct: 302 FIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAESPCV 352
Query: 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NL 446
S + EE+FGP + ++ + + + ++ L A I +
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412
Query: 447 QRTWRVSEALEY--GLVGVNEGLISTEV-------APFGGVKQSGLGREGSKYGMDEFL 496
+ ++ LE G + N EV P+ S + +L
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHRWL 470
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 196 bits (499), Expect = 2e-58
Identities = 67/452 (14%), Positives = 129/452 (28%), Gaps = 62/452 (13%)
Query: 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 131
E + +A++ T E++K ++K + L ++E+ + ++ K + V E
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 132 ------------VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW 179
+D K E V I D + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIG-PIGIIY 120
Query: 180 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-D 238
+ AL G T++++ + A +A + +
Sbjct: 121 ESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 180
Query: 239 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF-DDADLNVAV 297
+L ++R+ G L++ LE G I + ADL AV
Sbjct: 181 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240
Query: 298 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 357
+ AK + G ++ ++ I ++F + ++ V E +
Sbjct: 241 PVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVV 299
Query: 358 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 417
A E E + +
Sbjct: 300 PATEDDW------------------------------------------PTEYLDLIIAI 317
Query: 418 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGG 477
K +EAI + G + I T N + ++ V VN T+ FG
Sbjct: 318 KVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGF 377
Query: 478 VKQSGLGREGS----KYGMDEFLEIKYVCLGD 505
+ G+ + G+ E K+V LG+
Sbjct: 378 GAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 107 bits (268), Expect = 8e-26
Identities = 77/462 (16%), Positives = 136/462 (29%), Gaps = 62/462 (13%)
Query: 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ--LITLEQGKPLKEA 128
++ +A A N ++ RS L K +D L A+ + + I L K A
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 129 VGEVD----YGAKFIEFYAEEAKRVY------GEIIPATLPDRRLFVLKQPVGVAGAITP 178
+ + E + K V G++ A D L + + V +
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122
Query: 179 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL-------ALQAGIPPGVVNV 231
+ +I ++ G ++K + + T A++ P
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182
Query: 232 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 291
++ D+ D L + + GS A+ +K+ V G + +DA
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLG---HADGICSIYLDEDA 239
Query: 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351
DL A +L AK + I KF+ + G
Sbjct: 240 DLIKAKRISLDAKTNYPAGCNAMETLL-----INPKFSKWWEVLENLTLEGG-------- 286
Query: 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 411
V +K K + + LG + E +E
Sbjct: 287 ---------------VTIHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFL 331
Query: 412 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 471
+ E AI N ++ I T N + + ++ V N ST
Sbjct: 332 SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNA---STR 388
Query: 472 VA---PFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 505
A +G G+ S + G G+D + +Y GD
Sbjct: 389 FADGFRYGFGAEVGISTSKIHARG-PVGLDGLVSYQYQIRGD 429
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 509 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.74 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.6e-107 Score=867.21 Aligned_cols=473 Identities=40% Similarity=0.639 Sum_probs=453.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
.++||||+|+++.++++++++||+||++|++++.++.+|++.||++|++||+ .|+++|.++|.++|++++++|++++
T Consensus 14 ~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~ 93 (494)
T d1bxsa_ 14 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 93 (494)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCH
Confidence 4799999999988889999999999999999999999999999999999995 6999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 94 eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 172 (494)
T d1bxsa_ 94 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 172 (494)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCC-CCceeEEEEccEEEEEEEeCccchhHHHHHH
Confidence 9999999999999999865 6899999999999999988877765543 3567889999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|++|.||||+++|+.|++.++
T Consensus 173 i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa 252 (494)
T d1bxsa_ 173 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 252 (494)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999888
Q ss_pred c-CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 270 G-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 270 ~-~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 253 ~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~ 332 (494)
T d1bxsa_ 253 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 332 (494)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred ccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCC
Confidence 5 689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||+
T Consensus 333 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~ 412 (494)
T d1bxsa_ 333 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 412 (494)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999987656689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
++|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.-.
T Consensus 413 ~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~~~ 491 (494)
T d1bxsa_ 413 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQ 491 (494)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSC
T ss_pred HHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEecCC
Confidence 9999999999999999999999999999999999999888788999999999999999999999999999999998643
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.3e-106 Score=859.77 Aligned_cols=475 Identities=39% Similarity=0.616 Sum_probs=454.4
Q ss_pred CCccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHH
Q 010482 31 AFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLM 107 (509)
Q Consensus 31 ~~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~ 107 (509)
....++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|+
T Consensus 11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~ 90 (494)
T d1o04a_ 11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 3456899999999988889999999999999999999999999999999999985 6999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHH
Q 010482 108 AHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 186 (509)
Q Consensus 108 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 186 (509)
+++++|++++++|+|||..++. .|+..++..+++++.+.....++..+.. .+...++.++|+|||++|+|||||+...
T Consensus 91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 169 (494)
T d1o04a_ 91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQ 169 (494)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccC-CCceeEEEEecccEEEEECCcccHHHHH
Confidence 9999999999999999999985 5999999999999999988877765543 3566789999999999999999999999
Q ss_pred HHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHH
Q 010482 187 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 266 (509)
Q Consensus 187 ~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 266 (509)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+++|+.|++
T Consensus 170 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~ 249 (494)
T d1o04a_ 170 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQV 249 (494)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999998
Q ss_pred Hhh-cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 267 GAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 267 ~~~-~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
.++ +++||+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|.++++++++|+|.
T Consensus 250 ~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~ 329 (494)
T d1o04a_ 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 329 (494)
T ss_dssp HHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcc
Confidence 876 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++++++||++++.+++++.++|++++++|+++++||....+.|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 330 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~e 409 (494)
T d1o04a_ 330 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 409 (494)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999987666789999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 410 ai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~ 489 (494)
T d1o04a_ 410 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 489 (494)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeC
Confidence 99999999999999999999999999999999999999998877789999999999999999999999999999999875
Q ss_pred c
Q 010482 506 M 506 (509)
Q Consensus 506 ~ 506 (509)
-
T Consensus 490 p 490 (494)
T d1o04a_ 490 P 490 (494)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.3e-105 Score=852.79 Aligned_cols=470 Identities=39% Similarity=0.617 Sum_probs=450.1
Q ss_pred cCeeEcCEeeeCCCCCeE-EeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTL-EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~-~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..+||||+|+++.++.++ +++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++++++
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 468999999998766655 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||+.+++.|+..+++.+++++.......+..... ..+...++.++|+|||++|+|||||+...++++++
T Consensus 100 la~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ 178 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL-PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEEC-GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcchhhhhhhhhhhhccccccccccccccccccc-CCCcccccccccceeeecccCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999988776654433 23567899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|.||||+++|+.|.+.+++++
T Consensus 179 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 257 (503)
T d1a4sa_ 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 999999999999999999999999999999999999999999 5789999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
||+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|+++|.+.++++++|+|.++.+++|
T Consensus 258 ~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~g 337 (503)
T d1a4sa_ 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMG 337 (503)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC------CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
|++++.+++++++++++++++||++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 p~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 417 (503)
T d1a4sa_ 338 GLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV 417 (503)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHH
Confidence 999999999999999999999999999997532 35899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|+++|||++||||+|...++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 418 i~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 496 (503)
T d1a4sa_ 418 LQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcC
Confidence 9999999999999999999999999999999999999998887889999999999999999999999999999999874
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-105 Score=846.96 Aligned_cols=471 Identities=36% Similarity=0.612 Sum_probs=441.5
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
|+.++||||+|+++ ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|+++++
T Consensus 1 m~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 79 (474)
T d1wnda_ 1 MQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 79 (474)
T ss_dssp CCCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHH
Confidence 35689999999986 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||+.++.. ++..+...+++++...........+...++...+++++|+|||++|+|||||+.+.++++
T Consensus 80 ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 159 (474)
T d1wnda_ 80 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 159 (474)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccH
Confidence 9999999999999999975 556666666666665544443333333456778999999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..+++++++ ++|+|++|+|+|+++++++.|++||+|++|.||||+++|+.|.+.+++
T Consensus 160 a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~ 238 (474)
T d1wnda_ 160 APALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238 (474)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhc
Confidence 9999999999999999999999999999876 499999999999888999999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.++++.
T Consensus 239 ~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~ 318 (474)
T d1wnda_ 239 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 318 (474)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCE-EEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAK-VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~-~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
+||++++.+.+++.+++++++.+|+. ++.|+......|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 319 ~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~ 398 (474)
T d1wnda_ 319 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNW 398 (474)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999985 55666555456899999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 399 an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 399 ANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 999999999999999999999999999999999999888788999999999999999999999999999999875
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-101 Score=825.50 Aligned_cols=468 Identities=32% Similarity=0.502 Sum_probs=438.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
+++||||+|+++ +.+++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++
T Consensus 38 ~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~e 115 (516)
T d1uzba_ 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999985 5689999995 7999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC-CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..+++.|+.+++..+++++..+....+.... ...++...+..++|+|||++|+|||||+.+++++++
T Consensus 116 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~ 195 (516)
T d1uzba_ 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccccccc
Confidence 9999999999999999999999999999999988776654322 233456778899999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh--
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 269 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-- 269 (509)
+||++||+||+|||+.+|+++..|.+++.++|+|+|++|+|+|++.++++.|++||+|++|.||||+.+|+.|++.++
T Consensus 196 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~ 275 (516)
T d1uzba_ 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSC
T ss_pred chhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999988899999999999999999999999999999887
Q ss_pred ----cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 270 ----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 270 ----~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
.++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++| |.
T Consensus 276 ~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g-~~ 354 (516)
T d1uzba_ 276 APGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PA 354 (516)
T ss_dssp CTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-CG
T ss_pred ccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-CC
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999 67
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++++++||++++.+++++.++|++++++|+.+ +||...+..|+|++|||+.+++++|++++||+||||++|++|+|.||
T Consensus 355 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~ee 433 (516)
T d1uzba_ 355 EENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAE 433 (516)
T ss_dssp GGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred cccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHH
Confidence 88999999999999999999999999888766 45555445689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 502 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~-~g~~~l~~~~~~k~~~ 502 (509)
||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|++ |+.+++++||+.|+|+
T Consensus 434 ai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~ 513 (516)
T d1uzba_ 434 ALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEE
Confidence 9999999999999999999999999999999999999998754 346899999999999988 5689999999999998
Q ss_pred Eec
Q 010482 503 LGD 505 (509)
Q Consensus 503 ~~~ 505 (509)
.++
T Consensus 514 ~r~ 516 (516)
T d1uzba_ 514 ERF 516 (516)
T ss_dssp EEC
T ss_pred EcC
Confidence 653
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=4.1e-96 Score=780.65 Aligned_cols=468 Identities=31% Similarity=0.511 Sum_probs=434.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH-hhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
+++||||+|+. ++++++++||.||+++++++.++.+|++.|+++|++|++ .|+++|.++|+++|+++++.|++++++
T Consensus 17 ~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 94 (499)
T d1ky8a_ 17 YPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 94 (499)
T ss_dssp ECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 67999999996 578999999999999999999999999999999988877 799999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC----CCCCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
|++++++|+|||..+++.|++++++.++|++...++..+.... ....+...++.++|+|||++|+|||||+.++++
T Consensus 95 la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~ 174 (499)
T d1ky8a_ 95 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 174 (499)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhh
Confidence 9999999999999999999999999999999888776554322 122346678999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..+.+++.++|+|+++++++.+++ +.+..|+.||+|+.+.||||+.+++.+.+.+
T Consensus 175 ~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~ 253 (499)
T d1ky8a_ 175 KITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVG 253 (499)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred cchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEEeecc
Confidence 999999999999999999999999999999999999999999999864 5678899999999999999999999999977
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+ .+++++|+|||||+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.|++
T Consensus 254 ~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~ 331 (499)
T d1ky8a_ 254 G--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPT 331 (499)
T ss_dssp C--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCcc
Confidence 5 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEE---ecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl---~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
+++||+++..+++++++++++++++|++++.||.... ..+..++++ .++.+||++++||+||||++|++|+|.||
T Consensus 332 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~e 409 (499)
T d1ky8a_ 332 VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQ 409 (499)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEEcCCHHH
Confidence 9999999999999999999999999999999998753 233333333 45668999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 410 ai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~ 489 (499)
T d1ky8a_ 410 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 489 (499)
T ss_dssp HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEc
Confidence 99999999999999999999999999999999999999997664 47899999999999999999999999999999997
Q ss_pred ccCC
Q 010482 505 DMNR 508 (509)
Q Consensus 505 ~~~~ 508 (509)
+..+
T Consensus 490 ~~~~ 493 (499)
T d1ky8a_ 490 YKGK 493 (499)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 6543
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=5.2e-93 Score=753.59 Aligned_cols=463 Identities=34% Similarity=0.563 Sum_probs=434.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
+++||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|
T Consensus 4 ~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~l 81 (474)
T d1euha_ 4 YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 81 (474)
T ss_dssp CCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 579999999874 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccc-----cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI-----IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
++++++|+|||..+++.|+...+..++++........... .+....+...+++++|+|||++|+|||||+...++
T Consensus 82 a~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~ 161 (474)
T d1euha_ 82 GAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGS 161 (474)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhh
Confidence 9999999999999999999999999999888765543221 11222345678899999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||.++++.+.+.+
T Consensus 162 ~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a 241 (474)
T d1euha_ 162 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 241 (474)
T ss_dssp HHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred hchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhc
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999987
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+ .+++++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.++++...++.|+|.+..
T Consensus 242 ~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 319 (474)
T d1euha_ 242 G--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA 319 (474)
T ss_dssp T--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTC
T ss_pred c--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCccccc
Confidence 6 78999999999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
.++|++...+.+++...+.+....++..+.++.. .|+|++|||+..++++|++++||+||||++|++|+|+||||+
T Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~ 395 (474)
T d1euha_ 320 -DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 395 (474)
T ss_dssp -SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHH
T ss_pred -ccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHH
Confidence 5789999999999999999999999988776544 479999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 396 ~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 472 (474)
T d1euha_ 396 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472 (474)
T ss_dssp HHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence 9999999999999999999999999999999999999765 457899999999999999999999999999999886
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.4e-87 Score=701.57 Aligned_cols=422 Identities=30% Similarity=0.460 Sum_probs=386.8
Q ss_pred HHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhc
Q 010482 73 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG 151 (509)
Q Consensus 73 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 151 (509)
|++||++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++........
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999996 5999999999998877665433
Q ss_pred cc---cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCcc
Q 010482 152 EI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 228 (509)
Q Consensus 152 ~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gv 228 (509)
.. ......+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+ ++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cccccc
Confidence 22 11223456678999999999999999999999999999999999999999999999999999998866 599999
Q ss_pred EEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhcc
Q 010482 229 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 308 (509)
Q Consensus 229 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~ 308 (509)
++++.+.+... ..+. ++.++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 161 ~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~ 238 (446)
T d1ad3a_ 161 YLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNS 238 (446)
T ss_dssp EEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTT
T ss_pred cccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCC
Confidence 99999865544 3444 567999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCC
Q 010482 309 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 388 (509)
Q Consensus 309 GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g 388 (509)
||.|++++|+|||+++||+|+++|.+.++.+ +|+|.++++++||++++.+++++..++++ ++...|+... .++
T Consensus 239 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~~-~~~ 311 (446)
T d1ad3a_ 239 GQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWD-QSS 311 (446)
T ss_dssp TCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCEE-TTT
T ss_pred CCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceeec-CCC
Confidence 9999999999999999999999999999887 89999999999999999999999888764 4455555443 457
Q ss_pred ceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 010482 389 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 468 (509)
Q Consensus 389 ~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~ 468 (509)
+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++..
T Consensus 312 ~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 391 (446)
T d1ad3a_ 312 RYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIV 391 (446)
T ss_dssp TEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSG
T ss_pred CCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred --CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 469 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 469 --~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 392 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 429 (446)
T d1ad3a_ 392 HITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429 (446)
T ss_dssp GGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEEC
T ss_pred CCCCCCCCccccccceeccchHHHHHHHHhceeEEEEc
Confidence 457899999999999999999999999999999986
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=3.2e-83 Score=680.41 Aligned_cols=439 Identities=21% Similarity=0.278 Sum_probs=378.9
Q ss_pred CCeEEeecCCCCCEEE-EEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 010482 48 GKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 126 (509)
Q Consensus 48 ~~~~~~~~p~~g~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 126 (509)
+++|+++||+|||.|+ +++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 5789999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhhcccc------C--CCCCCceeEEEeecceEEEEEcCCChhHHHHH--HhhhhHhhC
Q 010482 127 EAVGEVDYGAKFIEFYAEEAKRVYGEII------P--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT--RKVGPALAC 196 (509)
Q Consensus 127 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~l~~ALaa 196 (509)
+++.|+..+++.++||++..++...... + ...++...+..++|+|||++|+|||||+.... +++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHH
Confidence 9999999999999999998876543321 1 12234567789999999999999999986544 689999999
Q ss_pred CCEEEecCCCCCHHHHHHHH----HHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 197 GCTVVVKPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 197 GN~vVlkps~~~p~~~~~l~----~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||+||+|||+.+|.++.++. ++|.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|.+.+++++
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred hccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccc
Confidence 99999999999999987665 55668899999999999988899999999999999999999999999999999998
Q ss_pred CeE--EeecCCCCceEEcCCCCHHHHH--HHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHHhccccCCCCCC
Q 010482 273 KKV--SLELGGNAPCIVFDDADLNVAV--NGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGE 347 (509)
Q Consensus 273 ~~~--~lelgG~~~~iV~~daDl~~a~--~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~l~~~~~~~~~G~p~~~ 347 (509)
+++ ++|||||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++.+ +.|++.+++.++.. ++
T Consensus 242 ~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~~ 315 (504)
T d1ez0a_ 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------SP 315 (504)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------CC
T ss_pred ccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------cc
Confidence 775 5599999999999999999874 5789999999999999999999887755 46777777665543 45
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEe---cCCCCCcccccccccceEEEEEeCCHH
Q 010482 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS---NVKSEMLVSREEVFGPVAPLLCFKTEE 424 (509)
Q Consensus 348 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~eE~fgPv~~v~~~~~~~ 424 (509)
++.+||+++..+++++ ++.+..+|+++..|+... .+..|+++. ++..++++++||+||||++|++|+|+|
T Consensus 316 ~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~ 388 (504)
T d1ez0a_ 316 STLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAES----PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVA 388 (504)
T ss_dssp BCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCCT----TSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHH
T ss_pred ccccccchhhhhhhhh---hhhhhhhhhhcccccccc----cccCCccccccccccccchhhcccccCCeeeeeecCCHH
Confidence 7889999998887765 566677889988887643 344444443 344578999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEEcC--CHHHHHHHHhhcc--ceEEEECCCCCC-------CCCCCccCCCCCCCCCCChHHHHH
Q 010482 425 EAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLIS-------TEVAPFGGVKQSGLGREGSKYGMD 493 (509)
Q Consensus 425 eai~l~n~~~~gl~asv~t~--d~~~~~~~~~~l~--~G~v~iN~~~~~-------~~~~pfGG~k~SG~G~~~g~~~l~ 493 (509)
|||+++|+++|||+++|||+ |..++.+++++|+ +|+|+||+++++ ....||||.|.||.| ..|.++++
T Consensus 389 eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~ 467 (504)
T d1ez0a_ 389 DMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIH 467 (504)
T ss_dssp HHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGG
T ss_pred HHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHH
Confidence 99999999999999999996 5568999999997 899999986531 134588999999955 56899999
Q ss_pred hhheeeE
Q 010482 494 EFLEIKY 500 (509)
Q Consensus 494 ~~~~~k~ 500 (509)
+|+++.+
T Consensus 468 ~f~r~v~ 474 (504)
T d1ez0a_ 468 RWLRPVA 474 (504)
T ss_dssp GGEEEEE
T ss_pred HHhchhh
Confidence 9987543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=9.4e-68 Score=549.67 Aligned_cols=389 Identities=19% Similarity=0.163 Sum_probs=315.8
Q ss_pred HHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhH------------HHHHHHH
Q 010482 71 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE------------VDYGAKF 138 (509)
Q Consensus 71 ~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e------------v~~~~~~ 138 (509)
+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+||+..+++.| ++.+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999987655 5667777
Q ss_pred HHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHH
Q 010482 139 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 218 (509)
Q Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~ 218 (509)
+++++.......+...... ........++|+||+++++|||||+.+.++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWV-REDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEE-CTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccccc-cccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 8877765544443332221 224456788999999999999999999999999999999999999999999999999998
Q ss_pred HHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCC-ceEEcCCCCH
Q 010482 219 ALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA-PCIVFDDADL 293 (509)
Q Consensus 219 l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~-~~iV~~daDl 293 (509)
+.++ |+|.++++.+.+.+.+....+..++. +.|+||+..++.+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLRE---YLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT---TCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhcccccc---cCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 8766 55555577777666666666665544 34444444555666677777888889888765 5788899999
Q ss_pred HHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC
Q 010482 294 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 373 (509)
Q Consensus 294 ~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 373 (509)
+.|++.++.++|.+ ||.|++++|+|||+++||+|+++|.+...+..++++.++...
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~----------------------- 292 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTR----------------------- 292 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHH-----------------------
T ss_pred hhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhhh-----------------------
Confidence 99999999999877 999999999999999999999999999887765544332110
Q ss_pred CCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Q 010482 374 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 453 (509)
Q Consensus 374 Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~ 453 (509)
.+.+.+... ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 293 ----------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~ 353 (414)
T d1o20a_ 293 ----------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV 353 (414)
T ss_dssp ----------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH
T ss_pred ----------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHH
Confidence 011111111 1234679999999999999999999999999999999999999999999999
Q ss_pred hhccceEEEECCCCCCCCCCCccCCCCCCCC--CC--ChHHHHHhhheeeEEEEecc
Q 010482 454 EALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE--GSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 454 ~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G--~~--~g~~~l~~~~~~k~~~~~~~ 506 (509)
+++++|+|+||+++...+..|||+.+.||+| +. +|++|+++||+.|+|.++++
T Consensus 354 ~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 354 SEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp HHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 9999999999998765556677766666653 33 38999999999999988754
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-53 Score=440.14 Aligned_cols=399 Identities=18% Similarity=0.139 Sum_probs=282.8
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHH-h------hHHHHHHHH
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPLKEA-V------GEVDYGAKF 138 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a-~------~ev~~~~~~ 138 (509)
.++++++.|++|++.|+.+|.++|.++|+++++.|+++.++|+++ .+.+.|++.... | ..++..++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 467888999999999999999999999999999999999999885 345566654321 0 124445555
Q ss_pred HHHHHHHHHhhhccccC--CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHH
Q 010482 139 IEFYAEEAKRVYGEIIP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 216 (509)
Q Consensus 139 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~ 216 (509)
++..+...+. .+.+.. ....+...+..+.|+||+++| |+++| ..++.+.++||++||+||+||++.++.++..+.
T Consensus 84 l~~i~~~~dp-vg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELEDP-VGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCCS-SSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhcccc-ceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 5554432211 111111 112345677889999999988 66667 566788899999999999999999999988877
Q ss_pred HHH--------HHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEc
Q 010482 217 ELA--------LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF 288 (509)
Q Consensus 217 ~~l--------~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 288 (509)
+++ .++|+|+++++++++ ..++++.|..|++|+.|+||||...++.+.+.+ .+|++.++||++|+||+
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~---~~pvi~~~~G~~~~~Vd 236 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLD 236 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEEC
T ss_pred HHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeeccc---cceEEEecCCccceeec
Confidence 665 467999999999987 467899999999999999999999988887765 35899999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 010482 289 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 368 (509)
Q Consensus 289 ~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 368 (509)
+|||++.|++.++.++|.+.|| |++.++++||+++++.|...+....+.- . .+. .++.........+.
T Consensus 237 ~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~g---v------~l~--~~~~~~~~~~~~~~ 304 (436)
T d1vlua_ 237 EDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGG---V------TIH--ATKDLKTAYFDKLN 304 (436)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHC---C------CBE--ECHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCC---c------EEE--eCHHHHHHhhhhhh
Confidence 9999999999999999999986 8899999999999988866555444431 0 010 12222222211111
Q ss_pred HHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Q 010482 369 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 448 (509)
Q Consensus 369 ~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~ 448 (509)
+. |.. .+....|++....+.+ +.+|.|+|+++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 305 ----~~------~~~---~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~ 368 (436)
T d1vlua_ 305 ----EL------GKL---TEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN 368 (436)
T ss_dssp ----HH------TCC---CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHH
T ss_pred ----hc------ccc---cccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHH
Confidence 11 111 1123334443333333 5799999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceEEEECCCCCCCCCCCccCCCCCCC----CCCChHHHHHhhheeeEEEEec
Q 010482 449 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 449 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++|++++++|.||||+++.+.++.+||--.+-|+ ....|+.||++.|..|++..++
T Consensus 369 a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 369 AEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp HHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred HHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 99999999999999999988777777762222233 2348899999999999998764
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.74 E-value=0.024 Score=55.16 Aligned_cols=256 Identities=19% Similarity=0.236 Sum_probs=154.8
Q ss_pred CCceeEEEeecceEEEEEcCCC---hhHHHHHHhhhhHhhCCCE--EEecCCCCCHHHHHHHHHHHHHcCCCCccEEeec
Q 010482 159 PDRRLFVLKQPVGVAGAITPWN---FPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 233 (509)
Q Consensus 159 ~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~--vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~ 233 (509)
+|.....++.|+--|++..|.- ||-..++ ..+||-.+|.. |++-|+...|.+ .-+.+.+|+-+ +.-+
T Consensus 110 ~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM-~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~~--iy~~- 181 (431)
T d1k75a_ 110 PGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQD--VFNV- 181 (431)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCHHHHHH-HHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCCE--EEEC-
T ss_pred CCceeeeeeeehhhheeeccCCCccchHHHHH-HHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCccc--eEec-
Confidence 4566678899999999999964 6664444 47899999974 556777666643 23345667653 2222
Q ss_pred CCchhhhhhhhc----CCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeec-CCCCceE--EcCCCCHHHHHHHHHHHHhh
Q 010482 234 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPCI--VFDDADLNVAVNGALAAKFR 306 (509)
Q Consensus 234 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lel-gG~~~~i--V~~daDl~~a~~~i~~~~~~ 306 (509)
| |.+.-.+|.- -|.|++|+=.|+.=+..+=....+... .+-..+ -|.+=++ -++++|.+.++..++.-+=.
T Consensus 182 G-GaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH 259 (431)
T d1k75a_ 182 G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 259 (431)
T ss_dssp C-HHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred C-ChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHHHHhccCC
Confidence 3 5554445543 678999998888766544333332211 122222 2555433 35568999988888776655
Q ss_pred ccCCccccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Q 010482 307 NSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 384 (509)
Q Consensus 307 ~~GQ~C~a~~rv~V~~--~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 384 (509)
... .+.++|.. +..+++.+.+.+.+..+. ... .+....
T Consensus 260 ~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~---------------r~~-------i~~~s~------------- 299 (431)
T d1k75a_ 260 GPD-----SQVILLTPAADMARRVAEAVERQLAELP---------------RAE-------TARQAL------------- 299 (431)
T ss_dssp CTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS---------------SCH-------HHHHHH-------------
T ss_pred ccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch---------------HHH-------HHHhhh-------------
Confidence 433 34466654 444555555555554431 000 001110
Q ss_pred CCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhc-cceEEEE
Q 010482 385 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL-EYGLVGV 463 (509)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l-~~G~v~i 463 (509)
+-. .++.++|.+|+++++|..--= ...|.++|+. ++..++ ++|.|++
T Consensus 300 ------------------------~~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIfl 347 (431)
T d1k75a_ 300 ------------------------NAS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFL 347 (431)
T ss_dssp ------------------------TTC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEEE
T ss_pred ------------------------ccc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhhc
Confidence 001 245679999999999995432 5788888876 466776 4999999
Q ss_pred CCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 010482 464 NEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501 (509)
Q Consensus 464 N~~~~---------~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~ 501 (509)
..++. .++.+|-||. +|..+.-+++.|++.-++
T Consensus 348 G~~sp~a~GDY~aGpnHvLPT~G~-----Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 348 GDWSPESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTV 389 (431)
T ss_dssp STTCCHHHHHHTSSSCCCCCCTTG-----GGTCCCCCGGGGEEEEEE
T ss_pred CCCCcchhhccccCCCccCCCCCc-----eeecCCCCHHHeeeeeeE
Confidence 87654 2356776654 455555667888776443
|