Citrus Sinensis ID: 010504

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MIKQILGRLPRKPSKSSENREFGGSSTPSSNATSGSSSYDLVSNRPVNTDHMPLPGFDSASNLGDGQGSKFPQVGNPRLNGNSVVAPYEALPGFRDVASFEKQNLLIRKLNLCCVLFDFTDPTKNLKEKDVKRQTLLELVDFITSANGKFTETVMQEVIKMVSVNLFRSLSPQPRENKTLESFDLEEEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEKDCKLADTVIKGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQNLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWKRLEEIAAANSTK
cHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
*IK************************************************************************************YEALPGFRDVASFEKQNLLIRKLNLCCVLFDFTDPTKNLKEKDVKRQTLLELVDFITSANGKFTETVMQEVIKMVSVNLFRSLSPQPRENKTLESFDLEEEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEKDCKLADTVIKGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQNLTVNVRKIFSEIDPELFDECLQKFKE****VEEIRTQCDASWKRLE**AA*****
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MIKQILGRLPRKPSKSSENREFGGSSTPSSNATSGSSSYDLVSNRPVNTDHMPLPGFDSASNLGDGQGSKFPQVGNPRLNGNSVVAPYEALPGFRDVASFEKQNLLIRKLNLCCVLFDFTDPTKNLKEKDVKRQTLLELVDFITSANGKFTETVMQEVIKMVSVNLFRSLSPQPRENKTLESFDLEEEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLHKPKCLAMYHQPLSYCITQFVEKDCKLADTVIKGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQKCMVPLFRQIASCLSSSHFQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQNLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWKRLEEIAAANSTK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform The B regulatory subunit may modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment.probableQ9LU89
Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform The B regulatory subunit may modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment.probableQ8LF36
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta 1 isoform The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Has a role in cell shape control and septum formation.probableQ10428

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2NPP, chain B
Confidence level:very confident
Coverage over the Query: 102-477
View the alignment between query and template
View the model in PyMOL